Rozi Mohamed Editor Science Behind the Fragrance
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Thymelaeaceae)
Origin and diversification of the Australasian genera Pimelea and Thecanthes (Thymelaeaceae) by MOLEBOHENG CYNTHIA MOTS! Thesis submitted in fulfilment of the requirements for the degree PHILOSOPHIAE DOCTOR in BOTANY in the FACULTY OF SCIENCE at the UNIVERSITY OF JOHANNESBURG Supervisor: Dr Michelle van der Bank Co-supervisors: Dr Barbara L. Rye Dr Vincent Savolainen JUNE 2009 AFFIDAVIT: MASTER'S AND DOCTORAL STUDENTS TO WHOM IT MAY CONCERN This serves to confirm that I Moleboheng_Cynthia Motsi Full Name(s) and Surname ID Number 7808020422084 Student number 920108362 enrolled for the Qualification PhD Faculty _Science Herewith declare that my academic work is in line with the Plagiarism Policy of the University of Johannesburg which I am familiar. I further declare that the work presented in the thesis (minor dissertation/dissertation/thesis) is authentic and original unless clearly indicated otherwise and in such instances full reference to the source is acknowledged and I do not pretend to receive any credit for such acknowledged quotations, and that there is no copyright infringement in my work. I declare that no unethical research practices were used or material gained through dishonesty. I understand that plagiarism is a serious offence and that should I contravene the Plagiarism Policy notwithstanding signing this affidavit, I may be found guilty of a serious criminal offence (perjury) that would amongst other consequences compel the UJ to inform all other tertiary institutions of the offence and to issue a corresponding certificate of reprehensible academic conduct to whomever request such a certificate from the institution. Signed at _Johannesburg on this 31 of _July 2009 Signature Print name Moleboheng_Cynthia Motsi STAMP COMMISSIONER OF OATHS Affidavit certified by a Commissioner of Oaths This affidavit cordons with the requirements of the JUSTICES OF THE PEACE AND COMMISSIONERS OF OATHS ACT 16 OF 1963 and the applicable Regulations published in the GG GNR 1258 of 21 July 1972; GN 903 of 10 July 1998; GN 109 of 2 February 2001 as amended. -
CITES Appendix II
PC20 Inf. 7 Annex 9 INTRODUCTION TO CITES AND AGARWOOD OVERVIEW Asian Regional Workshop on Agarwood; 22-24 November 2011 By Milena Sosa Schmidt, CITES Secretariat: [email protected] A bit of history Several genera from the family Thymeleaceae are agarwood producing taxa. These are: Aquilaria, Enkleia, Aetoxylon, Gonystylus, Wikstroemia, Gyrinops. They produce different qualities of agarwood from which Aquilaria seems to be the best (see Indonesia report of 2003). From these six genera we have currently three listed on CITES Appendix II. The history of these listings is as follows: THYMELAEACEAE (AQUILARIACEAE) (E) Agarwood, ramin; (S) Madera de Agar, ramin; (F) Bois d'Agar, ramin Aquilaria spp. II 12/01/05 #1CoP13 II/r AE 12/01/05 Excludes Aquilaria malaccensis. Excluye Aquilaria malaccensis. Exclus Aquilaria malaccensis. II/r KW 12/01/05 Excludes Aquilaria malaccensis. Excluye Aquilaria malaccensis. Exclus Aquilaria malaccensis. II/r QA 12/01/05 Excludes Aquilaria malaccensis. Excluye Aquilaria malaccensis. Exclus Aquilaria malaccensis. II/r SY 12/01/05 Excludes Aquilaria malaccensis. Excluye Aquilaria malaccensis. Exclus Aquilaria malaccensis. II 13/09/07 #1CoP14 II 23/06/10 #4CoP15 Aquilaria malaccensis II 16/02/95 #1CoP9 II 12/01/05 Included in Aquilaria spp. Incluida en Aquilaria spp. Inclus dans Aquilaria spp. Gonystylus spp. III ID 06/08/01 #1CoP11 III/r MY 17/08/01 II 12/01/05 #1CoP13 II/r MY 12/01/05 II/w MY 07/06/05 II 13/09/07 #1CoP14 II 23/06/10 #4CoP15 Gyrinops spp. II 12/01/05 #1CoP13 II/r AE 12/01/05 II/r KW 12/01/05 II/r QA 12/01/05 II/r SY 12/01/05 II 13/09/07 #1CoP14 II 23/06/10 #4CoP15 The current annotation for these taxa is #4 and reads: All parts and derivatives, except: 1 PC20 Inf. -
Review of on the Basis of of 2014 CITES Quotas of Species Selected
UNEP-WCMC technical report Review of species selected on the basis of the Analysis of 2014 CITES export quotas Part II (Version edited for public release) Review of species selected on the basis of the Analysis of 2014 CITES export quotas. Part II. Prepared for The European Commission, Directorate General Environment , Directorate E - Global & Regional Challenges, LIFE ENV.E.2. – Global Sustainability, Trade & Multilateral Agreements , Brussels, Belgium Published November 2014 Copyright European Commission 2014 Citation UNEP-WCMC. 2014. Review of species selected on the basis of the Analysis of 2014 CITES export quotas. Part II. UNEP-WCMC, Cambridge. The UNEP World Conservation Monitoring Centre (UNEP-WCMC) is the specialist biodiversity assessment centre of the United Nations Environment Programme, the world’s foremost intergovernmental environmental organization. The Centre has been in operation for over 30 years, combining scientific research with policy advice and the development of decision tools. We are able to provide objective, scientifically rigorous products and services to help decision -makers recognize the value of biodiversity and apply this knowledge to all that they do. To do this, we collate and verify data on biodiversity and ecosystem services that we analyze and interpret in comprehensive assessments, making the results available in ap propriate forms for national and international level decision-makers and businesses. To ensure that our work is both sustainable and equitable we seek to build the capacity of partners where needed, so that they can provide the same services at national and regional scales. The contents of this report do not necessarily reflect the views or policies of UNEP, contributory organisations or editors. -
Volatile Constituents of Endophytic Fungi Isolated from Aquilaria Sinensis with Descriptions of Two New Species of Nemania
life Article Volatile Constituents of Endophytic Fungi Isolated from Aquilaria sinensis with Descriptions of Two New Species of Nemania Saowaluck Tibpromma 1,2,3,†, Lu Zhang 4,†, Samantha C. Karunarathna 1,2,3, Tian-Ye Du 1,2,3, Chayanard Phukhamsakda 5,6 , Munikishore Rachakunta 7 , Nakarin Suwannarach 8,9 , Jianchu Xu 1,2,3,*, Peter E. Mortimer 1,2,3,* and Yue-Hu Wang 4,* 1 CAS Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China; [email protected] (S.T.); [email protected] (S.C.K.); [email protected] (T.-Y.D.) 2 World Agroforestry Centre, East and Central Asia, Kunming 650201, China 3 Centre for Mountain Futures, Kunming Institute of Botany, Kunming 650201, China 4 Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China; [email protected] 5 Institute of Plant Protection, College of Agriculture, Jilin Agricultural University, Changchun 130118, China; [email protected] 6 Engineering Research Center of Chinese Ministry of Education for Edible and Medicinal Fungi, Jilin Agricultural University, Changchun 130118, China 7 State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China; [email protected] Citation: Tibpromma, S.; Zhang, L.; 8 Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand; Karunarathna, S.C.; Du, T.-Y.; [email protected] Phukhamsakda, C.; Rachakunta, M.; 9 Research Center of Microbial Diversity and Sustainable Utilization, Faculty of Science, Chiang Mai University, Suwannarach, N.; Xu, J.; Mortimer, Chiang Mai 50200, Thailand P.E.; Wang, Y.-H. -
A Review of CITES Appendices I and II Plant Species from Lao PDR
A Review of CITES Appendices I and II Plant Species From Lao PDR A report for IUCN Lao PDR by Philip Thomas, Mark Newman Bouakhaykhone Svengsuksa & Sounthone Ketphanh June 2006 A Review of CITES Appendices I and II Plant Species From Lao PDR A report for IUCN Lao PDR by Philip Thomas1 Dr Mark Newman1 Dr Bouakhaykhone Svengsuksa2 Mr Sounthone Ketphanh3 1 Royal Botanic Garden Edinburgh 2 National University of Lao PDR 3 Forest Research Center, National Agriculture and Forestry Research Institute, Lao PDR Supported by Darwin Initiative for the Survival of the Species Project 163-13-007 Cover illustration: Orchids and Cycads for sale near Gnommalat, Khammouane Province, Lao PDR, May 2006 (photo courtesy of Darwin Initiative) CONTENTS Contents Acronyms and Abbreviations used in this report Acknowledgements Summary _________________________________________________________________________ 1 Convention on International Trade in Endangered Species (CITES) - background ____________________________________________________________________ 1 Lao PDR and CITES ____________________________________________________________ 1 Review of Plant Species Listed Under CITES Appendix I and II ____________ 1 Results of the Review_______________________________________________________ 1 Comments _____________________________________________________________________ 3 1. CITES Listed Plants in Lao PDR ______________________________________________ 5 1.1 An Introduction to CITES and Appendices I, II and III_________________ 5 1.2 Current State of Knowledge of the -
Aquilaria Crassna Pierre Ex Lecomte En Guyane : Approches Métagénomique, Biochimique Et Histologique
Présentée et soutenue publiquement le 20 avril 2016 par : Auteur du mémoire Titre du mémoire, v.1.10 Thèse En vue de l’obtention du grade de Docteur de l’université de Guyane Discipline : Sciences agronomiques et écologiques Spécialité : Biologie des organismes, biologies animales, végétales et microbiennes. Présentée et soutenue publiquement le 4 février 2020 par : CLARA ZAREMSKI Pour une production contrôlée d’agarwood d’Aquilaria crassna Pierre ex Lecomte en Guyane : Approches métagénomique, biochimique et histologique. JURY Nadine Amusant Chercheure Co-encadrante de Thèse Amadou Bâ PU, HDR Président du Jury, Rapporteur Jacques Beauchêne Chercheur Examinateur Marc Ducousso DR, HDR Directeur de Thèse Marie Fleury MCF Examinatrice Christine Gérardin PU, HDR Rapporteur Franck Roubaud MCF Membre invité Ecole Doctorale n°587 : Diversités, Santé et développement en Amazonie « Tout ce qui arrive est le résultat d’une confluence. » Dr. Norin Chai « Les idées provocatrices sont légitimes, au moins pour s’assurer que ce n’est pas par habitude mentale qu’on exclut certaines possibilités. » Pr. Thibault Damour « Alba embarqua pour Tahiti le 13 Novembre 1851. » D’après Elizabeth Gilbert, The Signature of All Things. i ii RAPPEL DU TITRE Pour une production contrôlée d’agarwood d’Aquilaria crassna Pierre ex Lecomte en Guyane : Approches métagénomique, biochimique et histologique. iii iv RESUME Aquilaria Lam. est un genre d’arbre tropical de la famille des Thymelaeaceae, origi- naire de l’Asie du Sud-Est. Ce genre compte actuellement vingt et une espèces dont le bois sain est de couleur blanche. Lorsque l’arbre est blessé, en interaction avec des micro-organismes environnementaux, l’arbre produit un bois transformé par sa forte teneur en composés secondaires. -
Sotwp 2016.Pdf
STATE OF THE WORLD’S PLANTS OF THE WORLD’S STATE 2016 The staff and trustees of the Royal Botanic Gardens, Kew and the Kew Foundation would like to thank the Sfumato Foundation for generously funding the State of the World’s Plants project. State of the World’s Plants 2016 Citation This report should be cited as: RBG Kew (2016). The State of the World’s Plants Report – 2016. Royal Botanic Gardens, Kew ISBN: 978-1-84246-628-5 © The Board of Trustees of the Royal Botanic Gardens, Kew (2016) (unless otherwise stated) Printed on 100% recycled paper The State of the World’s Plants 1 Contents Introduction to the State of the World’s Plants Describing the world’s plants 4 Naming and counting the world’s plants 10 New plant species discovered in 2015 14 Plant evolutionary relationships and plant genomes 18 Useful plants 24 Important plant areas 28 Country focus: status of knowledge of Brazilian plants Global threats to plants 34 Climate change 40 Global land-cover change 46 Invasive species 52 Plant diseases – state of research 58 Extinction risk and threats to plants Policies and international trade 64 CITES and the prevention of illegal trade 70 The Nagoya Protocol on Access to Genetic Resources and Benefit Sharing 76 References 80 Contributors and acknowledgments 2 Introduction to the State of the World’s Plants Introduction to the State of the World’s Plants This is the first document to collate current knowledge on as well as policies and international agreements that are the state of the world’s plants. -
Complete Chloroplast Genome Sequence of Aquilaria Sinensis (Lour.) Gilg and Evolution Analysis Within the Malvales Order
ORIGINAL RESEARCH published: 08 March 2016 doi: 10.3389/fpls.2016.00280 Complete Chloroplast Genome Sequence of Aquilaria sinensis (Lour.) Gilg and Evolution Analysis within the Malvales Order Ying Wang 1, Di-Feng Zhan 2, Xian Jia 3, Wen-Li Mei 1, Hao-Fu Dai 1, Xiong-Ting Chen 1* and Shi-Qing Peng 1* 1 Key Laboratory of Biology and Genetic Resources of Tropical Crops, Ministry of Agriculture, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China, 2 College of Agronomy, Hainan University, Haikou, China, 3 State Key Laboratory of Cellular Stress Biology, School of Life Sciences, Xiamen University, Xiamen, China Aquilaria sinensis (Lour.) Gilg is an important medicinal woody plant producing agarwood, which is widely used in traditional Chinese medicine. High-throughput sequencing of chloroplast (cp) genomes enhanced the understanding about evolutionary relationships Edited by: within plant families. In this study, we determined the complete cp genome sequences Daniel Pinero, Universidad Nacional Autónoma de for A. sinensis. The size of the A. sinensis cp genome was 159,565 bp. This genome México, México included a large single-copy region of 87,482 bp, a small single-copy region of 19,857 Reviewed by: bp, and a pair of inverted repeats (IRa and IRb) of 26,113 bp each. The GC content of Mehboob-ur-Rahman, the genome was 37.11%. The A. sinensis cp genome encoded 113 functional genes, National Institute for Biotechnology & Genetic Engineering, Pakistan including 82 protein-coding genes, 27 tRNA genes, and 4 rRNA genes. Seven genes Shichen Wang, were duplicated in the protein-coding genes, whereas 11 genes were duplicated in Kansas State University, USA the RNA genes. -
CONVENTION on INTERNATIONAL TRADE in ENDANGERED SPECIES of WILD FAUNA and FLORA Amendments to Appendices I and II of CITES Thirt
CONVENTION ON INTERNATIONAL TRADE IN ENDANGERED SPECIES OF WILD FAUNA AND FLORA Amendments to Appendices I and II of CITES Thirteenth Meeting of the Conference of the Parties 3-14 October 2004 Bangkok, Thailand A. Proposal Inclusion in Appendix II of agarwood producing species Aquilaria spp. currently not included in the Appendices and Gyrinops spp. The species meet the criterion listed in Resolution Conf. 9.24 (Rev. CoP12), annex 2a paragraph A and paragraph B.i, and additionally, the criterion listed in annex 2b paragraph A and B). B. Proponent The Republic of Indonesia C. Supporting statement 1. Taxonomy 1.1 Class: MAGNOLIOPSIDA 1.2 Order: MYRTALES 1.3 Family: THYMELAEACEAE 1.4 Genus: 1.4.1: Aquilaria 1.4.2: Gyrinops 1.5 Species: See Annex 1. 1.6 Scientific synonyms: See Annex 1. 1.7 Common names: See Annex 1. 1.8 Code numbers: NA 2. Biological parameters 2.1 Distribution Aquilaria species have adapted to live in various habitats, including those that are rocky, sandy or calcareous, well-drained slopes and ridges and land near swamps. They typically grow between altitudes of 0-850 m, and up to 1000 m in locations with average daily temperatures of 20-22° C. A. beccariana van Tiegh. The natural distribution extends from peninsular Malaysia to Sumatra, and common in Borneo. This species found in primary forest from the low land up to 825 m, rarely in swampy forest. 1 A. hirta Ridl. Distributes in Malay Peninsula (Trengganu, Pahang, Johore), Singapore and east Sumatra (Senamaninik), Riau and Lingga islands. This species grows on hill slopes, from the lowland up to 300 m. -
Wood for the Trees: a Review of the Agarwood (Gaharu) Trade in Malaysia
WOOD FOR THE TREES : A REVIEW OF THE AGARWOOD (GAHARU) TRADE IN MALAYSIA LIM TECK WYN NOORAINIE AWANG ANAK A REPORT COMMISSIONED BY THE CITES SECRETARIAT Published by TRAFFIC Southeast Asia, Petaling Jaya, Selangor, Malaysia © 2010 The CITES Secretariat. All rights reserved. All material appearing in this publication is copyrighted and may be reproduced with permission. Any reproduction in full or in part of this publication must credit the CITES Secretariat as the copyright owner. This report was commissioned by the CITES Secretariat. The views of the authors expressed in this publication do not however necessarily reflect those of the CITES Secretariat. The geographical designations employed in this publication, and the presentation of the material, do not imply the expression of any opinion whatsoever on the part of the CITES Secretariat concerning the legal status of any country, territory, or area, or its authorities, or concerning the definition of its frontiers or boundaries. ~~~~~~~~~~~~~~~~~~ The TRAFFIC symbol copyright and Registered Trademark ownership is held by WWF. TRAFFIC is a joint programme of WWF and IUCN. Suggested citation: Lim Teck Wyn and Noorainie Awang Anak (2010). Wood for trees: A review of the agarwood (gaharu) trade in Malaysia TRAFFIC Southeast Asia, Petaling Jaya, Selangor, Malaysia ISBN 9789833393268 Cover: Specialised agarwood retail shops have proliferated in downtown Kuala Lumpur for the Middle East tourist market Photograph credit: James Compton/TRAFFIC Wood for the trees :A review of the agarwood (gaharu) -
A Review on the Malaysian Aquilaria Species in Karas Plantation and Agarwood Production
International Journal of Academic Research in Business and Social Sciences 2017, Vol. 7, No. 4 ISSN: 2222-6990 A Review on the Malaysian Aquilaria species in Karas Plantation and Agarwood Production Mohd Fauzi Elias1, Husni Ibrahim1 and Wan Rusmawati Wan Mahamod2 Department of Biology, Department of Chemistry, Faculty of Science and Mathematics Universiti Pendidikan Sultan Idris, Tanjung Malim, Malaysia Corresponding Author Email: [email protected] DOI: 10.6007/IJARBSS/v7-i4/2911 URL: http://dx.doi.org/10.6007/IJARBSS/v7-i4/2911 Abstract Malaysia is one of the countries which is rich in its flora and fauna bio-diversity. Malaysian forest products have been exploited since ancient times for its high economic values. One of these high economic value products is agarwood. Thymelaeacea is one medium-size family tree where it is estimated to consist of 50 genera and 900 species of which many can be found in Africa, Australia and Asia. Most species of Aquilaria in Thymelaeaceae family produced agarwood or ‘gaharu’. Aquilaria malaccensis is a species of the highest recorded number of planting by karas tree farmers and known as the primary producer of agarwood in Malaysia. Agarwood is non timber forest product it is one of the precious wood on earth and prized for its rich and wonderful fragrance. Agarwood is formed due to the phathological process as respond to fungal infection or chemically stimulated. This paper seek to understand in general the type of karas trees species most favoured by karas farmers and to know what other similar species that are capable of producing resin for gaharu products. -
Aquilaria Malaccensis Lam Anor Basah Azzarina1, Rozi Mohamed1*, Shiou Yih Lee1 and Mohd Nazre2
Azzarina et al. New Zealand Journal of Forestry Science (2016) 46:12 New Zealand Journal of DOI 10.1186/s40490-016-0068-9 Forestry Science RESEARCH ARTICLE Open Access Temporal and spatial expression of terpene synthase genes associated with agarwood formation in Aquilaria malaccensis Lam Anor Basah Azzarina1, Rozi Mohamed1*, Shiou Yih Lee1 and Mohd Nazre2 Abstract Background: The diseased wood, agarwood, from the tropical tree taxa Aquilaria, is famed for its unique fragrance and medicinal values, mainly due to its richness in secondary metabolites such as the sesquiterpenes. The presence of sesquiterpenes in high numbers and amounts correlates with agarwood of high quality. Methods: To understand the synthesis of this important compound, we cloned two candidate genes in the terpenoid synthesis pathway from Aquilaria malaccensis Lam., a major agarwood tree species. The genes encoding sesquiterpene synthase (AmSesTPS1) and δ-guaiene synthase (AmGuaiS1) were successfully cloned from callus RNA, using specific primers derived from transcriptomic data, in a reverse transcription PCR reaction. Results: The full-length complementary DNA (cDNA) sequence of AmSesTPS1 was 1632 bp encoding for 544 amino acids, and AmGuaiS1 was 1644 bp encoding for 547 amino acids. Sequence alignment analysis showed that AmSesTPS1 shared between 99 to 100 % identity with sesquiterpene synthase from Aquilaria sinensis (Lour.) Spreng. while AmGuaiS1 shared between 95 to 99 % identity with δ-guaiene synthases from Aquilaria crassna Pierre ex Lecomte and A. sinensis. The genes were functionally characterised in a time course wounding experiment using 3-year-old living trees. Two types of wood samples were collected: (1) from wounded area (S1) and (2) from 5 cm below the wounded area (S2).