viruses Article RNAseq Reveals the Contribution of Interferon Stimulated Genes to the Increased Host Defense and Decreased PPR Viral Replication in Cattle 1, 1, Krishnaswamy Gopalan Tirumurugaan y , Rahul Mohanchandra Pawar y, Gopal Dhinakar Raj 2,* , Arthanari Thangavelu 3, John A. Hammond 4 and Satya Parida 4,* 1 Department of Animal Biotechnology, Madras Veterinary College, Tamil Nadu Veterinary and Animal Sciences University, Chennai 600007, India;
[email protected] (K.G.T.);
[email protected] (R.M.P.) 2 Centre for Animal Health Studies, Tamil Nadu Veterinary and Animal Sciences University, Chennai 600051, India 3 Department of Veterinary Microbiology, Madras Veterinary College, Tamil Nadu Veterinary and Animal Sciences University, Chennai 600007, India;
[email protected] 4 The Pirbright Institute, Ash Road, Pirbright, Surrey GU24 0NF, UK;
[email protected] * Correspondence:
[email protected] (G.D.R.);
[email protected] (S.P.) These authors contributed equally. y Received: 7 March 2020; Accepted: 16 April 2020; Published: 20 April 2020 Abstract: Peste des petits ruminants virus (PPRV) is known to replicate in a wide variety of ruminants causing very species-specific clinical symptoms. Small ruminants (goats and sheep) are susceptible to disease while domesticated cattle and buffalo are dead-end hosts and do not display clinical symptoms. Understanding the host factors that influence differential pathogenesis and disease susceptibility could help the development of better diagnostics and control measures. To study this, we generated transcriptome data from goat and cattle peripheral blood mononuclear cells (PBMC) experimentally infected with PPRV in-vitro. After identifying differentially expressed genes, we further analyzed these immune related pathway genes using the Search Tool for the Retrieval of Interacting Genes/Proteins (STRING) and selected candidate genes were validated using in-vitro experiments.