Medical Mycology Advance Access published February 11, 2016 Medical Mycology, 2016, 0, 1–15 doi: 10.1093/mmy/myw004 Advance Access Publication Date: 0 2016 Original Article Original Article Phylogenetic analysis of dermatophyte species using DNA sequence polymorphism in calmodulin gene Bahram Ahmadi1,2, Hossein Mirhendi3,∗, Koichi Makimura4, G. Sybren de Hoog5, Mohammad Reza Shidfar2, 6 2 Sadegh Nouripour-Sisakht and Niloofar Jalalizand Downloaded from 1Department of Microbiology and Parasitology, School of Para-Medicine, Bushehr University of Medical Sciences, Bushehr, Iran, 2Departments of Medical Parasitology & Mycology, School of Public Health; National Institute of Health Research, Tehran University of Medical Sciences, Tehran, Iran, 3Departments of Medical Parasitology & Mycology, School of Medicine, Isfahan University of Medical Sciences, http://mmy.oxfordjournals.org/ Isfahan, Iran, 4Teikyo University Institute of Medical Mycology and Genome Research Center, Tokyo, Japan, 5Fungal Biodiversity Center, Institute of the Royal Netherlands, Academy of Arts and Sciences, Centraalbureau voor Schimmelcultures-KNAW, Utrecht, The Netherlands and 6Cellular and Molecular Research Center, Yasuj University of Medical Sciences, Yasuj, Iran ∗To whom correspondence should be addressed. Hossein Mirhendi, Professor, Department of Medical Parasitology and Mycology, School of Medicine; Isfahan University of Medical Sciences, Isfahan, Iran. Tel/Fax: +00982188951392; E-mail:
[email protected]. by guest on February 12, 2016 Received 23 October 2015; Revised 23 December 2015; Accepted 5 January 2016 Abstract Use of phylogenetic species concepts based on rDNA internal transcribe spacer (ITS) regions have improved the taxonomy of dermatophyte species; however, confirmation and refinement using other genes are needed. Since the calmodulin gene has not been systematically used in dermatophyte taxonomy, we evaluated its intra- and interspecies sequence variation as well as its application in identification, phylogenetic analysis, and taxonomy of 202 strains of 29 dermatophyte species.