Original Antigenic Sin: How First Exposure Shapes Lifelong Anti–Influenza Virus Immune Responses Ali Zhang, Hannah D

Total Page:16

File Type:pdf, Size:1020Kb

Original Antigenic Sin: How First Exposure Shapes Lifelong Anti–Influenza Virus Immune Responses Ali Zhang, Hannah D Original Antigenic Sin: How First Exposure Shapes Lifelong Anti–Influenza Virus Immune Responses Ali Zhang, Hannah D. Stacey, Caitlin E. Mullarkey, and Matthew S. Miller The term “original antigenic sin” (OAS) was first used observed in animal models and in the context of other in- in the 1960s to describe how one’s first exposure to fectious agents. For example, additional serum absorption influenza virus shapes the outcome of subsequent ex- experiments in ferrets infected in succession with three dif- posures to antigenically related strains. In the decades ferent influenza virus strains demonstrated that nearly all of the that have passed, OAS-like responses have been shown host Abs after the infection series were reactive against the first to play an integral role in both protection from and strain, only a fraction of serum Abs could be absorbed by the susceptibility to infections. OAS may also have an im- secondary virus, and fewer yet by the tertiary virus (3). These portant deterministic role in the differential efficacy of results could be replicated using sera of human donors who influenza vaccine responses observed for various age had been vaccinated against various influenza virus strains cohorts across seasons. In this article, we review how (3–6) and also using sera from rats that had been serially the understanding of OAS has progressed from its ini- infected (7). In addition to influenza virus infections, OAS has also been reported in children who were exposed to se- tial description and highlight important outstanding quential dengue virus infections (8). In all cases, the mani- questions in need of further study. The Journal of festation of OAS is fundamentally dependent upon the Immunology, 2019, 202: 335–340. relatedness of Ags between primary and secondary infections as this phenomenon is not observed in the context of se- quential exposure to distantly related (or unrelated) Ags (9). riginal antigenic sin (OAS) describes the phenome- non whereby the development of immunity against Recent refinements O pathogens/Ags is shaped by the first exposure to a Although the hierarchical nature of the Ab response against related pathogen/Ag. influenza virus was initially described over half a century ago, there has continued to be substantial interest in developing a The original “original antigenic sin” more detailed understanding of the influence of OAS on The term was first coined by Thomas Francis in 1960 (1). In subsequent infections and vaccinations using modern cohorts. his seminal study, Francis observed that hemagglutination To this end, in 2012, a large cross-sectional study of Ab re- inhibition assay titers were highest against seasonal influenza sponses against H3N2 viruses that circulated between 1968 strains to which specific age cohorts had first been exposed and 2008 in southern China clearly reaffirmed the strong (2). These observations were supported by serum absorption correlation between Ab titers and age of encounter to particular experiments, which confirmed that the vast majority of anti– influenza virus strains. Individuals reliably had the highest influenza virus Abs in a population were cross-reactive against titers of neutralizing Abs against those strains that circulated the pioneer strain of that age group (3). within the first decade of life and progressively lower titers of Taken together, these data led Francis to postulate that Abs against strains that circulated later (10). subsequent infections with similar influenza virus strains Cohort-based studies have undoubtedly provided valuable preferentially boost the Ab response against the original strain insight into the population structure of the Ab response as a (2). Although OAS has often historically been depicted as a consequence of OAS. However, a lack of longitudinal data has problematic response, recent data have demonstrated that, in hindered a detailed understanding of how hierarchical Ab certain contexts, eliciting OAS may also be beneficial. responses develop within a given host over long periods of The critical role of primary exposure in shaping the com- time. To address this gap, our group obtained serum samples position of the Ab repertoire was not only observed in humans gathered over a 20-y period from 40 individuals enrolled in the after influenza virus infections; this phenomenon was also Framingham Heart Study and measured changes in their Ab Michael G. DeGroote Institute for Infectious Disease Research, McMaster Immunology support from a CIHR Fredrick Banting and Charles Best Canada Graduate Scholarship Research Centre, Department of Biochemistry and Biomedical Sciences, McMaster Doctoral Award. University, Hamilton, Ontario L8S 4K1, Canada Address correspondence and reprint requests to Dr. Matthew S. Miller, Michael G. ORCID: 0000-0003-3426-5069 (M.S.M.). DeGroote Institute for Infectious Disease Research, McMaster Immunology Research Centre, Department of Biochemistry and Biomedical Sciences, McMaster University, Received for publication August 20, 2018. Accepted for publication October 10, 2018. Hamilton, ON L8S 4K1, Canada. E-mail address: [email protected] This work was supported in part by a Canadian Institutes of Health Research (CIHR) Abbreviations used in this article: bnAb, broadly neutralizing Ab; HA, hemagglutinin; operating grant (to M.S.M.). M.S.M. was also supported by a CIHR New Investigator OAS, original antigenic sin. Award and an Early Researcher Award from the Province of Ontario. A.Z. and H.D.S. were supported in part by Michael G. DeGroote Doctoral Scholarships of Excellence. Ó H.D.S. was also supported by an Ontario Graduate Scholarship, and A.Z. received Copyright 2019 by The American Association of Immunologists, Inc. 0022-1767/19/$37.50 www.jimmunol.org/cgi/doi/10.4049/jimmunol.1801149 336 BRIEF REVIEWS: ORIGINAL ANTIGENIC SIN titers against H1, H2, and H3 viruses in ∼5-y intervals (11). which they were initially elicited but bind poorly to drifted We observed that exposure to strains encountered later in life variants. Despite this, cross-reactive OAS Abs were found to “back-boosted” the Ab response to strains of the same subtype bind to the same general regions of HA as those generated encountered earlier in life. Thus, the strains of a given subtype during a primary exposure. These Abs were often clonally encountered earliest in life experienced the greatest number of related and remained capable of protecting against challenge back-boosting events, leading them to be consistently main- from antigenically drifted strains in vivo (35). Thus, OAS tained at the highest Ab titers (Fig. 1A) (11). The way in responses can offer protective benefits during secondary ex- which infections and vaccinations affect Ab titers to strains posures to drifted viruses as well. encountered earlier in life has also been elegantly studied and described by the Smith Laboratory (12). Importantly, their Effects of OAS on susceptibility to infection work using “Ab landscapes” demonstrated that antigenically Although the effects of OAS can in certain cases be beneficial advanced viruses were capable of both boosting Abs against by enhancing an individual’s or cohort’s relative protection antecedent strains and inducing Abs against antigenically against future infections when the strains are antigenically advanced strains. Recent high-throughput analyses of plas- related, it follows that this phenomenon can be problematic mablast repertories induced by vaccination have also sup- when strains are distantly related, leading to increased sus- ported the supposition that many Abs are derived from ceptibility to later infections. Using single year of age data, memory B cells specific for previously encountered strains our group reanalyzed the infamous “W-shaped” mortality (13–15). curve caused by the 1918/19 H1N1 Spanish Flu pandemic. Effects of OAS on protection from infection We reported that those born in 1890, the year of the H3Nx “Russian Flu” pandemic, experienced an unusual peak in Clearly, one of the most profound implications of OAS is the mortality (23). This phenomenon recurred when we exam- influence it exerts on an individual’s or cohort’s relative ined the single-year mortality data from the 2009 H1N1 protection against infections. A well-known recent example of Swine Flu pandemic and found an unexpected peak in a situation in which OAS conferred protection later in life mortality for those born during the 1957 H2N2 Asian Flu occurred during the 2009 H1N1 “Swine Flu” pandemic. pandemic (36). This led us to hypothesize that early-life During this pandemic, older individuals who had been ex- imprinting by pandemic strains of influenza virus might in- posed to the 1918 H1N1 “Spanish Flu” (and closely related crease susceptibility during subsequent pandemics caused by strains) experienced substantially lower relative mortality rates antigenically distinct strains. than those usually observed for an advanced age group OAS-like responses were also problematic during the 2013– (16–19). Exposure to earlier H1 viruses has also been pro- 2014 influenza season, when H1N1 viruses acquired a mu- posed as an explanation for the relatively low mortality ob- tation in an HA epitope that was the primary target of the Ab served by older individuals during the 1918 Spanish Flu response mounted by middle-aged individuals. The cohort pandemic (20–23). generated a focused Ab response against this epitope during In recent years, there has been a substantial renewal of in- early life exposure to seasonal H1N1 viruses that circulated in terest in understanding how and when OAS and pre-existing the 1970s. As reported by the Hensley laboratory, this epitope immunity affect incidence and mortality of influenza virus was conserved in the original 2009 H1N1 pandemic strain. infections (24). A detailed examination of age-specific mor- However, the drifted H1N1 strain that emerged in 2013– tality during the 1957 H2N2 “Asian Flu” pandemic led Ma 2014 contained a mutation in this region of HA that resulted and colleagues to conclude that “antigenic imprinting,” or in poor Ab binding and subsequently unusually high mor- OAS, was the most parsimonious explanation for the observed tality for middle-aged individuals (37, 38).
Recommended publications
  • Original Antigenic Sin: a Comprehensive Review
    Journal of Autoimmunity 83 (2017) 12e21 Contents lists available at ScienceDirect Journal of Autoimmunity journal homepage: www.elsevier.com/locate/jautimm Review article Original antigenic sin: A comprehensive review Anup Vatti a, Diana M. Monsalve b, Yovana Pacheco b, Christopher Chang a, * Juan-Manuel Anaya b, M. Eric Gershwin a, a University of California at Davis, Division of Rheumatology, Allergy and Clinical Immunology, Suite 6501, 451 Health Sciences Drive, Davis, CA, 95616, USA b Center for Autoimmune Diseases Research (CREA), School of Medicine and Health Sciences, Universidad del Rosario, Carrera 24 No. 63-C-69, Bogota, Colombia article info abstract Article history: The concept of “original antigenic sin” was first proposed by Thomas Francis, Jr. in 1960. This phe- Received 27 March 2017 nomenon has the potential to rewrite what we understand about how the immune system responds to Received in revised form infections and its mechanistic implications on how vaccines should be designed. Antigenic sin has been 24 April 2017 demonstrated to occur in several infectious diseases in both animals and humans, including human Accepted 25 April 2017 influenza infection and dengue fever. The basis of “original antigenic sin” requires immunological Available online 5 May 2017 memory, and our immune system ability to autocorrect. In the context of viral infections, it is expected that if we are exposed to a native strain of a pathogen, we should be able to mount a secondary immune Keywords: “ ” Vaccination response on subsequent exposure to the same pathogen. Original antigenic sin will not contradict this Bocavirus well-established immunological process, as long as the subsequent infectious antigen is identical to the Dengue original one.
    [Show full text]
  • B Cell Responses Against Influenza Viruses
    viruses Review B Cell Responses against Influenza Viruses: Short-Lived Humoral Immunity against a Life-Long Threat Jenna J. Guthmiller 1,* , Henry A. Utset 1 and Patrick C. Wilson 1,2 1 Section of Rheumatology, Department of Medicine, University of Chicago, Chicago, IL 60637, USA; [email protected] (H.A.U.); [email protected] (P.C.W.) 2 Committee on Immunology, University of Chicago, Chicago, IL 60637, USA * Correspondence: [email protected] Abstract: Antibodies are critical for providing protection against influenza virus infections. However, protective humoral immunity against influenza viruses is limited by the antigenic drift and shift of the major surface glycoproteins, hemagglutinin and neuraminidase. Importantly, people are exposed to influenza viruses throughout their life and tend to reuse memory B cells from prior exposure to generate antibodies against new variants. Despite this, people tend to recall memory B cells against constantly evolving variable epitopes or non-protective antigens, as opposed to recalling them against broadly neutralizing epitopes of hemagglutinin. In this review, we discuss the factors that impact the generation and recall of memory B cells against distinct viral antigens, as well as the immunological limitations preventing broadly neutralizing antibody responses. Lastly, we discuss how next-generation vaccine platforms can potentially overcome these obstacles to generate robust and long-lived protection against influenza A viruses. Keywords: influenza viruses; humoral immunity; broadly neutralizing antibodies; imprinting; Citation: Guthmiller, J.J.; Utset, H.A.; hemagglutinin; germinal center; plasma cells Wilson, P.C. B Cell Responses against Influenza Viruses: Short-Lived Humoral Immunity against a Life-Long Threat. Viruses 2021, 13, 1.
    [Show full text]
  • HLA, Immune Response, and Susceptibility to COVID-19
    REVIEW published: 08 January 2021 doi: 10.3389/fimmu.2020.601886 HLA, Immune Response, and Susceptibility to COVID-19 Fataneh Tavasolian 1, Mohsen Rashidi 2, Gholam Reza Hatam 3, Marjan Jeddi 4, Ahmad Zavaran Hosseini 5, Sayed Hussain Mosawi 6,7, Elham Abdollahi 8 and Robert D. Inman 1,9* 1 Spondylitis Program, Division of Rheumatology, Schroeder Arthritis Institute, University Health Network, Toronto, ON, Canada, 2 Department of Pharmacology, Faculty of Medicine, Mazandaran University of Medical Sciences, Sari, Iran, 3 Basic Sciences in Infectious Diseases Research Center, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran, 4 Endocrinology and Metabolism Research Center, Shiraz University of Medical Sciences, Shiraz, Iran, 5 Department of Immunology, Faculty of Medical Sciences, Tarbiat Modares University, Tehran, Iran, 6 Medical Sciences Research Center, Ghalib University, Kabul, Afghanistan, 7 COVID-19 Directorate, Ministry of Public Health, Kabul, Afghanistan, 8 Department of Medical Immunology and Allergy, School of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran, 9 Department of Medicine and Immunology, University of Toronto, Toronto, ON, Canada The severe acute respiratory syndrome caused by Coronavirus 2 (SARS-CoV-2) that appeared in December 2019 has precipitated the global pandemic Coronavirus Disease 2019 (COVID-19). However, in many parts of Africa fewer than expected cases of COVID- Edited by: 19, with lower rates of mortality, have been reported. Individual human leukocyte antigen Ruchi Tiwari, U.P. Pandit Deen Dayal Upadhyaya (HLA) alleles can affect both the susceptibility and the severity of viral infections. In the case Veterinary University, India of COVID-19 such an analysis may contribute to identifying individuals at higher risk of the Reviewed by: disease and the epidemiological level to understanding the differences between countries Talha Bin Emran, fi fl Begum Gulchemonara Trust in the epidemic patterns.
    [Show full text]
  • High Seroreactivity Against SARS-Cov-2 Spike Epitopes in a Pre SARS-Cov-2 Cohort: Implications for Antibody Testing and Vaccine Design
    medRxiv preprint doi: https://doi.org/10.1101/2020.05.18.20105189; this version posted May 22, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license . High seroreactivity against SARS-CoV-2 Spike epitopes in a pre SARS-CoV-2 cohort: implications for antibody testing and vaccine design Kaia Palm1*#, Mariliis Jaago1,2*, Annika Rähni1,2, Nadežda Pupina1, Arno Pihlak1, Helle Sadam1,2, Annela Avarlaid2, Anu Planken3, Margus Planken3, Liina Haring4, Eero Vasar5,6, Miljana Baćević7, France Lambert8, Eija Kalso9, Pirkko Pussinen10, Pentti J. Tienari11, Antti Vaheri12, Dan Lindholm13,14, Tõnis Timmusk1,2 and Amir M Ghaemmaghami15# 1Protobios Llc, Tallinn, Estonia. Electronic address: [email protected] 2Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn, Estonia; 3North Estonia Medical Centre Foundation, Tallinn, Estonia; 4Institute of Clinical Medicine, University of Tartu, Psychiatry Clinic of Tartu University Hospital, Estonia; 5Department of Physiology, Institute of Biomedicine and Translational Medicine, University of Tartu, Tartu, Estonia; 6Center of Excellence for Genomics and Translational Medicine, University of Tartu, Tartu, Estonia; 7Dental Biomaterial Research Unit (d-BRU), Faculty of Medicine, University of Liege, Liege, Belgium; 8Department of Periodontology and Oral Surgery, Faculty of Medicine, University
    [Show full text]
  • Setting up Medium- and Long-Term Vaccine Strain Selection and Immunity Management for SARS-Cov-2
    Setting up medium- and long-term vaccine strain selection and immunity management for SARS-CoV-2 Executive Summary 1. SARS-CoV-2 is evolving antigenically. Some variants are less well neutralized by antibodies raised to current vaccines, and the vaccine efficacy against these variants is lower than for matched virus. 2. Administration of further doses of the current vaccine, which is based on the spike protein from the Wuhan-like virus that emerged in 2019, might maintain and/or boost protection into winter 2021/22, but potentially less so for individuals with a less robust immune response, and less so if substantially antigenically variant viruses circulate widely. Eventually it is likely that the virus will display sufficient substantial antigenic variation and current vaccines will fail to protect against transmission, infection, or even against disease caused by newer variants. 3. Loss of vaccine effectiveness will result in further economic and social costs. 4. A solution is to update vaccines to keep pace with virus evolution, and the newer, more flexible vaccine platforms are particularly suitable for this approach. 5. Additional potential solutions are to invest in developing new vaccination strategies that could induce stronger T cell responses since T cell epitopes might vary less over time. 6. Another strategy would be to search for more broadly protective vaccines, including universal vaccine candidates, multivalent vaccines, and heterologous prime-boost strategies 7. We should also consider whether future vaccination policy will aim to immunize the whole population or only those at risk from severe disease, and how this might be impacted by the long-term accumulation of baseline immunity in the population and long-term evolution of the virus.
    [Show full text]
  • The Future for Influenza Preimmunity—Looking Back at Influenza Virus
    viruses Review Back to the Future for Influenza Preimmunity—Looking Back at Influenza Virus History to Infer the Outcome of Future Infections Magen Ellen Francis 1, Morgan Leslie King 1 and Alyson Ann Kelvin 1,2,3,* 1 Department of Microbiology and Immunology, Faculty of Medicine, Dalhousie University, Halifax, NS B3K 6R8, Canada; [email protected] (M.E.F.); [email protected] (M.L.K.) 2 Department of Pediatrics, Division of Infectious Disease, Faculty of Medicine, Dalhousie University, Halifax, NS B3K 6R8, Canada 3 Canadian Centre for Vaccinology, IWK Health Centre, Halifax NS B3K 6R8, Canada * Correspondence: [email protected]; Tel.: +1-902-470-2760 Received: 21 December 2018; Accepted: 22 January 2019; Published: 30 January 2019 Abstract: The influenza virus-host interaction is a classic arms race. The recurrent and evolving nature of the influenza virus family allows a single host to be infected several times. Locked in co-evolution, recurrent influenza virus infection elicits continual refinement of the host immune system. Here we give historical context of circulating influenza viruses to understand how the individual immune history is mirrored by the history of influenza virus circulation. Original Antigenic Sin was first proposed as the negative influence of the host’s first influenza virus infection on the next and Imprinting modernizes Antigenic Sin incorporating both positive and negative outcomes. Building on imprinting, we refer to preimmunity as the continual refinement of the host immune system with each influenza virus infection. We discuss imprinting and the interplay of influenza virus homology, vaccination, and host age establishing preimmunity. We outline host signatures and outcomes of tandem infection according to the sequence of virus and classify these relationships as monosubtypic homologous, monosubtypic heterologous, heterosubtypic, or heterotypic sequential infections.
    [Show full text]
  • Original Antigenic Sin Priming of Influenza Virus Hemagglutinin Stalk Antibodies
    Original antigenic sin priming of influenza virus hemagglutinin stalk antibodies Claudia P. Arevaloa, Valerie Le Sageb, Marcus J. Boltona, Theresa Eilolaa, Jennifer E. Jonesb, Karen A. Kormuthb, Eric Nturibib, Angel Balmasedac, Aubree Gordond, Seema S. Lakdawalab,e, and Scott E. Hensleya,1 aDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104; bDepartment of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, PA 15219; cCentro Nacional de Diagnóstico y Referencia, Ministry of Health, Managua, Nicaragua 16064; dDepartment of Epidemiology, School of Public Health, University of Michigan, Ann Arbor, MI 48109; and eCenter for Vaccine Research, University of Pittsburgh School of Medicine, Pittsburgh, PA 15219 Edited by Michael B.A. Oldstone, Scripps Research Institute, La Jolla, CA, and approved May 27, 2020 (received for review November 18, 2019) Immunity to influenza viruses can be long-lived, but reinfections but there are more conserved epitopes in the HA stalk domain. with antigenically distinct viral strains and subtypes are common. Antibodies that recognize the HA stalk of group 1 or group 2 Reinfections can boost antibody responses against viral strains viruses have been well characterized, but antibodies that recog- first encountered in childhood through a process termed “original nize the HA stalk of both group 1 and group 2 viruses are rare antigenic sin.” It is unknown how initial childhood exposures af- (15, 16). Interestingly, childhood influenza A virus exposures are fect the induction of antibodies against the hemagglutinin (HA) associated with heterosubtypic protection against distinct stalk domain of influenza viruses. This is an important consider- emerging influenza virus subtypes later in life (13).
    [Show full text]
  • Strategies to Alleviate Original Antigenic Sin Responses to Influenza
    Strategies to alleviate original antigenic sin responses to influenza viruses Jin Hyang Kima,1, William G. Davisb, Suryaprakash Sambharab, and Joshy Jacoba,2 aDepartment of Microbiology and Immunology, Emory Vaccine Center, Yerkes National Primate Center, Emory University, Atlanta, GA 30329; and bImmunology and Pathogenesis Branch, Influenza Division, National Centers for Immunization and Respiratory Diseases, Centers for Disease Control and Prevention, Atlanta, GA 30329 Edited* by Leonard A. Herzenberg, Stanford University, Stanford, CA, and approved July 10, 2012 (received for review November 4, 2009) Original antigenic sin is a phenomenon wherein sequential expo- (11), and its components including B. pertussis toxin (PT) and B. sure to closely related influenza virus variants reduces antibody pertussis endotoxin (LPS) have been shown to block or reverse (Ab) response to novel antigenic determinants in the second strain carrier-mediated hapten suppression (12, 13). Specifically, PT and, consequently, impairs the development of immune memory. stimulates DCs to up-regulate MHC class II and costimulatory This could pose a risk to the development of immune memory in molecules [cluster of differentiation (CD)80, CD86, CD40, and fl dendritic and epithelial cell (DEC)205] to produce IL-12 and persons previously infected with or vaccinated against in uenza. α Here, we explored strategies to overcome original antigenic sin TNF- and to up-regulate phosphorylation of ERK (14). This overall DC activation by PT elicits a Th1 response by promoting responses in mice sequentially exposed to two closely related γ fl T cells to produce IFN- . Bacterial DNA containing unmethy- hemagglutinin 1 neuraminidase 1 (H1N1) in uenza strains A/PR/8/ lated CpG-dinucleotide is also a strong adjuvant for Th1 re- 34 and A/FM/1/47.
    [Show full text]
  • Immune Response to DENV
    Learn More Dengue Clinical Case Management E-learning Immune Response to DENV DENV infected antigen presenting cells (APC) within the lymph node recruit T cells through the production of chemoattractants. The APCs process the foreign DENV proteins into small pieces for display on the cell surface. T cells that recognize the presented antigen become activated and produce pro-inflammatory mediators. This results in the activation of the two major branches of the adaptive immune response: • Humoral immunity: helper cells make pro-inflammatory mediators that activate B cells to make antibody to eliminate DENV • Cell-mediated immunity: cytotoxic T cells directly kill cells infected with DENV Development of Life-long Type Specific Immunity Soon after DENV infection, B cells become activated, proliferate and produce IgM against the infecting DENV type. Later, some B cells change to produce IgG (some IgA or IgE, too); however, the specificity of the antibody is the same. A subset of B cells become memory cells that provide life- long protection against the infecting DENV type. Serotype Cross-Reactivity in Dengue DENV types have similar envelope or E proteins so during infection, cross-reactive (heterotypic) antibodies against all DENV types are made. DENV types are immunologically distinct and induce the production of antibodies that are type-specific (homotypic). Centers for Disease Control and Prevention 1 National Center for Emerging and Zoonotic Infectious Diseases Learn More Dengue Clinical Case Management E-learning Immune Response to DENV Secondary DENV Infections If a person is re-infected with the same DENV type, memory B cells recognize it and will start to divide, resulting in the production of new B cells that make homotypic IgG and memory cells.
    [Show full text]
  • Immunology and Evolution of Infectious Disease
    Immunology and Evolution of Infectious Disease STEVEN A. FRANK Princeton University Press Princeton and Oxford Copyright © 2002 by Steven A. Frank Published by Princeton University Press, 41 William Street, Princeton, New Jersey 08540 In the United Kingdom: Princeton University Press, 3MarketPlace,Woodstock, Oxfordshire OX20 1SY All Rights Reserved Library of Congress Cataloging-in-Publication Data Frank, Steven A., 1957– Immunology and Evolution of Infectious Disease / Steven A. Frank. p. cm. Includes bibliographic references and index. ISBN 0–691–09594–9 (cloth : alk. paper) ISBN 0–691–09595–7 (pbk. : alk. paper) 1. Immunogenetics. 2. Host-parasite relationships— Genetic aspects. 3. Microorganisms—Evolution. 4. Antigens. 5. Molecular evolution. 6. Parasite antigens—Variation. I. Title. [DNLM: 1. Communicable Diseases—immunology. 2. Evolution, Molecular. 3. Genetics, Population. 4. Immunity—genetics. WC 100 F828i 2002] QR184 .F73 2002 616.9 0479—dc21 2002018384 British Library Cataloging-in-Publication Data is available Typeset by the author with TEX Composed in Lucida Bright Printed on acid-free paper. ∞ www.pupress.princeton.edu Printed in the United States of America 10 9 87654321 10 9 87654321 (Pbk.) Contents Acknowledgments xi 1 Introduction 3 PART I: BACKGROUND 2 Vertebrate Immunity 13 2.1 Nonspecific Immunity 14 2.2 Specific Immunity: Antigens andEpitopes 15 2.3 BCells and Antibodies 16 2.4 TCells and MHC 19 2.5 Summary 20 3 Benefits of Antigenic Variation 22 3.1 Extend Length of Infection 23 3.2 Infect Hosts withPriorExposure 24
    [Show full text]
  • Optimal Evolutionary Decision-Making to Store Immune Memory Oskar H Schnaack1,2, Armita Nourmohammad1,2,3*
    RESEARCH ARTICLE Optimal evolutionary decision-making to store immune memory Oskar H Schnaack1,2, Armita Nourmohammad1,2,3* 1Max Planck Institute for Dynamics and Self-organization, Go¨ ttingen, Germany; 2Department of Physics, University of Washington, Seattle, United States; 3Fred Hutchinson Cancer Research Center, Seattle, United States Abstract The adaptive immune system provides a diverse set of molecules that can mount specific responses against a multitude of pathogens. Memory is a key feature of adaptive immunity, which allows organisms to respond more readily upon re-infections. However, differentiation of memory cells is still one of the least understood cell fate decisions. Here, we introduce a mathematical framework to characterize optimal strategies to store memory to maximize the utility of immune response over an organism’s lifetime. We show that memory production should be actively regulated to balance between affinity and cross-reactivity of immune receptors for an effective protection against evolving pathogens. Moreover, we predict that specificity of memory should depend on the organism’s lifespan, and shorter lived organisms with fewer pathogenic encounters should store more cross-reactive memory. Our framework provides a baseline to gauge the efficacy of immune memory in light of an organism’s coevolutionary history with pathogens. Introduction Adaptive immunity in vertebrates develops during the lifetime of an organism to battle a multitude of evolving pathogens. The central actors in our adaptive immune system are diverse B- and T-cells, *For correspondence: whose unique surface receptors are generated through genomic rearrangement, mutation, and [email protected] selection (Janeway et al., 2005). The diversity of receptors allows the immune system to mount spe- cific responses against diverse pathogens.
    [Show full text]
  • Evidence for Deleterious Original Antigenic Sin in SARS-Cov-2
    bioRxiv preprint doi: https://doi.org/10.1101/2021.05.21.445201; this version posted May 24, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Evidence for Deleterious Original Antigenic Sin in 2 SARS-CoV-2 Immune Response 3 Sanjana R. Sen1, Emily C. Sanders2, Alicia M. Santos2, Keertna Bhuvan2, Derek Y. Tang2, 4 Aidan A. Gelston2, Brian M. Miller2, Joni L. Ricks-Oddie3,4 and Gregory A. Weiss1,2,5* 5 6 Author Affiliations: 7 1 Department of Molecular Biology & Biochemistry, University of California, Irvine, Irvine CA 92697-3900 USA 8 2 Department of Chemistry, University of California, Irvine, Irvine CA 92697-2025 USA 9 3 Center for Statistical Consulting, Department of Statistics, University of California, Irvine, Irvine CA 92697-1250 10 USA 11 4 Biostatics, Epidemiology and Research Design Unit, Institute for Clinical and Translational Sciences, University of 12 California, Irvine, Irvine CA 92697-4094 USA 13 5 Department of Pharmaceutical Sciences, University of California, Irvine, Irvine CA 92697-3958 USA 14 15 * Address correspondence to [email protected] 16 17 Corresponding Author: 18 *GAW e-mail: [email protected], Tel: +1-949-824-5566, address: 1102 Natural Sciences 2, Irvine, CA 92697-2025, 19 USA 20 21 Author Contributions: 22 S.R.S., and G.A.W. designed research; S.R.S., E.C.S., A.M.S., K.B., D.Y.T, A.A.G., and B.M.M. performed research; 23 S.R.S., E.C.S.
    [Show full text]