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Ancient Mitogenomes Shed Light on the Evolutionary History And
Ancient Mitogenomes Shed Light on the Evolutionary History and Biogeography of Sloths Frédéric Delsuc, Melanie Kuch, Gillian Gibb, Emil Karpinski, Dirk Hackenberger, Paul Szpak, Jorge Martinez, Jim Mead, H. Gregory Mcdonald, Ross Macphee, et al. To cite this version: Frédéric Delsuc, Melanie Kuch, Gillian Gibb, Emil Karpinski, Dirk Hackenberger, et al.. Ancient Mitogenomes Shed Light on the Evolutionary History and Biogeography of Sloths. Current Biology - CB, Elsevier, 2019. hal-02326384 HAL Id: hal-02326384 https://hal.archives-ouvertes.fr/hal-02326384 Submitted on 22 Oct 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. 1 Ancient Mitogenomes Shed Light on the Evolutionary 2 History and Biogeography of Sloths 3 Frédéric Delsuc,1,13,*, Melanie Kuch,2 Gillian C. Gibb,1,3, Emil Karpinski,2,4 Dirk 4 Hackenberger,2 Paul Szpak,5 Jorge G. Martínez,6 Jim I. Mead,7,8 H. Gregory 5 McDonald,9 Ross D. E. MacPhee,10 Guillaume Billet,11 Lionel Hautier,1,12 and 6 Hendrik N. Poinar2,* 7 Author list footnotes 8 1Institut des Sciences de l’Evolution de Montpellier -
71St Annual Meeting Society of Vertebrate Paleontology Paris Las Vegas Las Vegas, Nevada, USA November 2 – 5, 2011 SESSION CONCURRENT SESSION CONCURRENT
ISSN 1937-2809 online Journal of Supplement to the November 2011 Vertebrate Paleontology Vertebrate Society of Vertebrate Paleontology Society of Vertebrate 71st Annual Meeting Paleontology Society of Vertebrate Las Vegas Paris Nevada, USA Las Vegas, November 2 – 5, 2011 Program and Abstracts Society of Vertebrate Paleontology 71st Annual Meeting Program and Abstracts COMMITTEE MEETING ROOM POSTER SESSION/ CONCURRENT CONCURRENT SESSION EXHIBITS SESSION COMMITTEE MEETING ROOMS AUCTION EVENT REGISTRATION, CONCURRENT MERCHANDISE SESSION LOUNGE, EDUCATION & OUTREACH SPEAKER READY COMMITTEE MEETING POSTER SESSION ROOM ROOM SOCIETY OF VERTEBRATE PALEONTOLOGY ABSTRACTS OF PAPERS SEVENTY-FIRST ANNUAL MEETING PARIS LAS VEGAS HOTEL LAS VEGAS, NV, USA NOVEMBER 2–5, 2011 HOST COMMITTEE Stephen Rowland, Co-Chair; Aubrey Bonde, Co-Chair; Joshua Bonde; David Elliott; Lee Hall; Jerry Harris; Andrew Milner; Eric Roberts EXECUTIVE COMMITTEE Philip Currie, President; Blaire Van Valkenburgh, Past President; Catherine Forster, Vice President; Christopher Bell, Secretary; Ted Vlamis, Treasurer; Julia Clarke, Member at Large; Kristina Curry Rogers, Member at Large; Lars Werdelin, Member at Large SYMPOSIUM CONVENORS Roger B.J. Benson, Richard J. Butler, Nadia B. Fröbisch, Hans C.E. Larsson, Mark A. Loewen, Philip D. Mannion, Jim I. Mead, Eric M. Roberts, Scott D. Sampson, Eric D. Scott, Kathleen Springer PROGRAM COMMITTEE Jonathan Bloch, Co-Chair; Anjali Goswami, Co-Chair; Jason Anderson; Paul Barrett; Brian Beatty; Kerin Claeson; Kristina Curry Rogers; Ted Daeschler; David Evans; David Fox; Nadia B. Fröbisch; Christian Kammerer; Johannes Müller; Emily Rayfield; William Sanders; Bruce Shockey; Mary Silcox; Michelle Stocker; Rebecca Terry November 2011—PROGRAM AND ABSTRACTS 1 Members and Friends of the Society of Vertebrate Paleontology, The Host Committee cordially welcomes you to the 71st Annual Meeting of the Society of Vertebrate Paleontology in Las Vegas. -
Solenodon Genome Reveals Convergent Evolution of Venom in Eulipotyphlan Mammals
Solenodon genome reveals convergent evolution of venom in eulipotyphlan mammals Nicholas R. Casewella,1, Daniel Petrasb,c, Daren C. Cardd,e,f, Vivek Suranseg, Alexis M. Mychajliwh,i,j, David Richardsk,l, Ivan Koludarovm, Laura-Oana Albulescua, Julien Slagboomn, Benjamin-Florian Hempelb, Neville M. Ngumk, Rosalind J. Kennerleyo, Jorge L. Broccap, Gareth Whiteleya, Robert A. Harrisona, Fiona M. S. Boltona, Jordan Debonoq, Freek J. Vonkr, Jessica Alföldis, Jeremy Johnsons, Elinor K. Karlssons,t, Kerstin Lindblad-Tohs,u, Ian R. Mellork, Roderich D. Süssmuthb, Bryan G. Fryq, Sanjaya Kuruppuv,w, Wayne C. Hodgsonv, Jeroen Kooln, Todd A. Castoed, Ian Barnesx, Kartik Sunagarg, Eivind A. B. Undheimy,z,aa, and Samuel T. Turveybb aCentre for Snakebite Research & Interventions, Liverpool School of Tropical Medicine, Pembroke Place, L3 5QA Liverpool, United Kingdom; bInstitut für Chemie, Technische Universität Berlin, 10623 Berlin, Germany; cCollaborative Mass Spectrometry Innovation Center, University of California, San Diego, La Jolla, CA 92093; dDepartment of Biology, University of Texas at Arlington, Arlington, TX 76010; eDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138; fMuseum of Comparative Zoology, Harvard University, Cambridge, MA 02138; gEvolutionary Venomics Lab, Centre for Ecological Sciences, Indian Institute of Science, 560012 Bangalore, India; hDepartment of Biology, Stanford University, Stanford, CA 94305; iDepartment of Rancho La Brea, Natural History Museum of Los Angeles County, Los Angeles, -
Palaeoproteomics Resolves Sloth Relationships
ARTICLES https://doi.org/10.1038/s41559-019-0909-z Palaeoproteomics resolves sloth relationships Samantha Presslee1,2,3,24, Graham J. Slater4,24, François Pujos5, Analía M. Forasiepi5, Roman Fischer 6, Kelly Molloy7, Meaghan Mackie3,8, Jesper V. Olsen 8, Alejandro Kramarz9, Matías Taglioretti10, Fernando Scaglia10, Maximiliano Lezcano11, José Luis Lanata 11, John Southon12, Robert Feranec13, Jonathan Bloch14, Adam Hajduk15, Fabiana M. Martin16, Rodolfo Salas Gismondi 17, Marcelo Reguero18, Christian de Muizon19, Alex Greenwood20,21, Brian T. Chait 7, Kirsty Penkman22, Matthew Collins3,23 and Ross D. E. MacPhee2* The living tree sloths Choloepus and Bradypus are the only remaining members of Folivora, a major xenarthran radiation that occupied a wide range of habitats in many parts of the western hemisphere during the Cenozoic, including both continents and the West Indies. Ancient DNA evidence has played only a minor role in folivoran systematics, as most sloths lived in places not conducive to genomic preservation. Here we utilize collagen sequence information, both separately and in combination with published mitochondrial DNA evidence, to assess the relationships of tree sloths and their extinct relatives. Results from phylo- genetic analysis of these datasets differ substantially from morphology-based concepts: Choloepus groups with Mylodontidae, not Megalonychidae; Bradypus and Megalonyx pair together as megatherioids, while monophyletic Antillean sloths may be sister to all other folivorans. Divergence estimates are consistent with fossil evidence for mid-Cenozoic presence of sloths in the West Indies and an early Miocene radiation in South America. he sloths (Xenarthra, Folivora), nowadays a taxonomically consensus8–10,16,17 in morphology-based phylogenetic treatments is narrow (six species in two genera) component of the fauna of to place the three-toed sloth as sister to all other folivorans (Fig. -
A New Megalonychid Sloth from the Late Wisconsinan of the Dominican Republic Elizabeth Rega Western University of Health Sciences
Claremont Colleges Scholarship @ Claremont WM Keck Science Faculty Papers W.M. Keck Science Department 1-1-2002 A New Megalonychid Sloth From the Late Wisconsinan of the Dominican Republic Elizabeth Rega Western University of Health Sciences Donald A. McFarlane Claremont McKenna College; Pitzer College; Scripps College Joyce Lundberg Carleton University Keith Christenson Recommended Citation Rega, E., D.A. McFarlane, J. Lundberg, and K. Christenson. "A new Megalonychid sloth from the Late Wisconsinan of the Dominican Republic." Caribbean Journal of Science 38 (2002): 11-19. This Article is brought to you for free and open access by the W.M. Keck Science Department at Scholarship @ Claremont. It has been accepted for inclusion in WM Keck Science Faculty Papers by an authorized administrator of Scholarship @ Claremont. For more information, please contact [email protected]. Caribbean Journal of Science, Vol. 38, No. 1-2, 11-19, 2002 Copyright 2002 College of Arts and Sciences University of Puerto Rico, Mayagu¨ez A New Megalonychid Sloth from the Late Wisconsinan of the Dominican Republic ELIZABETH REGA1,DONALD A. MCFARLANE2,JOYCE LUNDBERG3, AND KEITH CHRISTENSON4 1Department of Anatomy, Western University of Health Sciences, Pomona, CA 91766 USA [email protected] 2W. M. Keck Science Center, The Claremont Colleges, 925 North Mills Avenue, Claremont CA 91711 USA 3Department of Geography and Environmental Studies, Carleton University, Ottawa, ON K1S 5B6, Canada 4327 Ridgecrest Drive, Daleville, VA 24083 USA ABSTRACT.—An unusually well preserved skull, mandible, and indisputably associated post-cranial ele- ments of new sloth, Acratocnus (Miocnus), were recovered from a cave in Jaragua National Park, Dominican Republic. -
North American Animals Extinct in the Holocene
SNo Common Name\Scientific Name Extinction Date Range Mammals Prehistoric extinctions (beginning of the Holocene to 1500 AD) American Cheetahs 1 Miracinonyx trumani & Miracinonyx 11000 BC. Northern North America inexpectatus American Lion 2 11000 BC. USA, Canada and Mexico Panthera leo atrox American Mastodon 3 4080 BC. USA and Canada Mammut americanum American Mountain Deer 4 10000 BC. USA Odocoileus lucasi 5 Aztlanolagus agilis 10000 BC. Southeastern Arizona to Central America Beautiful Armadillo 6 8000 BC. USA to South America Dasypus bellus 7 Bison antiquus 10000 BC. USA and Canada 8 Bison occidentalis 5000 BC Alaska to Minnesota Blunt-toothed Giant Hutia 9 11000 BC. Northern Lesser Antilles Amblyrhiza inundata California Tapir 10 11000 BC. USA Tapirus californicus Camelops 11 8000 BC. USA and Mexico Camelops spp. Capromeryx 12 11000 BC. USA and Mexico Capromeryx minor 13 Caribbean Ground Sloths 5000 BC. Caribbean Islands Columbian Mammoth 14 5800 BC. USA and Mexico Mammuthus columbi Dire Wolf 15 8000 BC. North America Canis dirus Florida spectacled bear 16 8000 BC. USA Tremarctos floridanus Giant Beaver 17 Castoroides leiseyorum & Castoroides 11000 BC. Canada and USA ohioensis 18 Glyptodon 10000 BC. Central America Harlan's Muskox 19 9000 BC. North America Bootherium bombifrons Harrington's Mountain Goat 20 12000 BC. USA Oreamnos harringtoni 21 Holmesina septentrionalis 8000 BC. USA Jefferson's Ground Sloth 22 11000 BC. USA and Canada Megalonyx spp. Mexican Horse 23 11000 BC. USA and Mexico Equus conversidens 24 Mylohyus 9000 BC. North America Neochoerus spp. 25 11000 BC. Southeast USA to Panama Neochoerus aesopi & Neochoerus pinckneyi Osborn's Key Mouse 26 11000 BC. -
Asynchronous Extinction of Late Quaternary Sloths on Continents and Islands
Asynchronous extinction of late Quaternary sloths on continents and islands David W. Steadman*†, Paul S. Martin‡, Ross D. E. MacPhee§, A. J. T. Jull¶, H. Gregory McDonaldʈ, Charles A. Woods**, Manuel Iturralde-Vinent††, and Gregory W. L. Hodgins¶ *Florida Museum of Natural History, University of Florida, Gainesville, FL 32611; ‡Desert Laboratory, Department of Geosciences, University of Arizona, Tucson, AZ 85721; §American Museum of Natural History, Central Park West at 79th Street, New York, NY 10024; ¶National Science Foundation–Arizona Accelerator Mass Spectrometry Laboratory, University of Arizona, Tucson, AZ 85721; ʈNational Park Service, 1201 Oakridge Drive, Suite 150, Fort Collins, CO 80525; **Bear Mountain Farm, HCR-61 Box 15B, Island Pond, VT 05846; and ††Museo Nacional de Historia Natural, Obispo 61, Plaza de Armas, La Habana Vieja 10100, Cuba Edited by William R. Dickinson, University of Arizona, Tucson, AZ, and approved June 24, 2005 (received for review April 4, 2005) Whatever the cause, it is extraordinary that dozens of genera of continental sloths would be expected to have disappeared con- large mammals became extinct during the late Quaternary currently. If human colonization were crucial, the extinctions throughout the Western Hemisphere, including 90% of the genera would be expected to have accompanied the first arrival of of the xenarthran suborder Phyllophaga (sloths). Radiocarbon people, initially on the mainland, and later on Caribbean islands. dates directly on dung, bones, or other tissue of extinct sloths place Here, we compare the 14C chronology based on sloth bones their ‘‘last appearance’’ datum at Ϸ11,000 radiocarbon years be- (purified collagen) from sites in the West Indies (Cuba and fore present (yr BP) or slightly less in North America, Ϸ10,500 yr BP Hispaniola) with that from well-preserved sloth dung (also in South America, and Ϸ4,400 yr BP on West Indian islands. -
Premaxillae of the Extinct Megalonychid Sloths Acratocnus, Neocnus, and Megalonyx, and Their Phylogenetic Implication
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/282505841 Premaxillae of the Extinct Megalonychid Sloths Acratocnus, Neocnus, and Megalonyx, and their Phylogenetic Implication.... Article in Journal of Mammalian Evolution · September 2015 DOI: 10.1007/s10914-015-9308-7 CITATIONS READS 2 169 4 authors, including: Lauren Lyon H. Gregory McDonald East Tennessee State University BLM - The Bureau of Land Management Salt … 8 PUBLICATIONS 2 CITATIONS 127 PUBLICATIONS 2,512 CITATIONS SEE PROFILE SEE PROFILE Timothy J. Gaudin University of Tennessee at Chattanooga 61 PUBLICATIONS 1,618 CITATIONS SEE PROFILE Some of the authors of this publication are also working on these related projects: Digital endocasts of extinct and extant sloths View project Palaeobiology and functional anatomy of fossil Carnivora View project All content following this page was uploaded by Timothy J. Gaudin on 27 November 2015. The user has requested enhancement of the downloaded file. Premaxillae of the Extinct Megalonychid Sloths Acratocnus, Neocnus, and Megalonyx, and their Phylogenetic Implications (Mammalia, Xenarthra) Lauren M. Lyon, Chelsea Powell, H. Gregory McDonald & Timothy J. Gaudin Journal of Mammalian Evolution ISSN 1064-7554 J Mammal Evol DOI 10.1007/s10914-015-9308-7 1 23 Your article is protected by copyright and all rights are held exclusively by Springer Science +Business Media New York. This e-offprint is for personal use only and shall not be self- archived in electronic repositories. If you wish to self-archive your article, please use the accepted manuscript version for posting on your own website. You may further deposit the accepted manuscript version in any repository, provided it is only made publicly available 12 months after official publication or later and provided acknowledgement is given to the original source of publication and a link is inserted to the published article on Springer's website. -
Evolution of Body Size in Anteaters and Sloths (Xenarthra, Pilosa): Phylogeny, Metabolism, Diet and Substrate Preferences N
Earth and Environmental Science Transactions of the Royal Society of Edinburgh, 106, 289–301, 2017 Evolution of body size in anteaters and sloths (Xenarthra, Pilosa): phylogeny, metabolism, diet and substrate preferences N. Toledo1,2, M.S. Bargo2,3, S.F. Vizcaı´no1,2, G. De Iuliis4 and F. Pujos5 1 CONICET – La Plata, Facultad de Ciencias Naturales y Museo, Universidad Nacional de La Plata, Argentina. Email: [email protected] 2 Divisio´n Paleontologı´a Vertebrados, Unidades de Investigacio´n Anexo Museo FCNyM-UNLP, Av. 60 y 122, 1900, La Plata, Argentina. 3 Comisio´n de Investigaciones Cientı´ficas, Buenos Aires, Argentina. 4 Department of Ecology and Evolutionary Biology, University of Toronto, 25 Harbord Street, Toronto M5S 3G5, Ontario, Canada; Section of Palaeobiology, Department of Natural History, Royal Ontario Museum, 100 Queen’s Park Crescent, Toronto M5S 2C6, Ontario, Canada. 5 IANIGLA,CCT-CONICET-Mendoza,Av.RuizLeals/n,ParqueGral.SanMartı´n, 5500 Mendoza, Argentina. ABSTRACT: Pilosa include anteaters (Vermilingua) and sloths (Folivora). Modern tree sloths are represented by two genera, Bradypus and Choloepus (both around 4–6 kg), whereas the fossil record is very diverse, with approximately 90 genera ranging in age from the Oligocene to the early Holocene. Fossil sloths include four main clades, Megalonychidae, Megatheriidae, Nothrotheriidae, and Mylo- dontidae, ranging in size from tens of kilograms to several tons. Modern Vermilingua are represented by three genera, Cyclopes, Tamandua and Myrmecophaga, with a size range from 0.25 kg to about 30 kg, and their fossil record is scarce and fragmentary. The dependence of the body size on phylo- genetic pattern of Pilosa is analysed here, according to current cladistic hypotheses. -
(More) SHAKING up the SLOTH FAMILY TREE
Media Inquiries: Kendra Snyder, Department of Communications 212-496-3419; [email protected] www.amnh.org __________________________________________________________________________________________ Embargoed until 11 am U.S. Eastern Time Thursday, June 6, 2019 SHAKING UP THE SLOTH FAMILY TREE COMPLEMENTARY STUDIES OVERTURN PREVIOUS VIEWS ABOUT SLOTH EVOLUTION New studies by two research teams published today in the journals Nature Ecology and Evolution and Current Biology challenge decades of accepted scientific opinion concerning the evolutionary relationships of tree sloths and their extinct kin. The research teams used different molecular tools—the protein collagen in one case and the mitochondrial genome in the other— but they reached nearly the same results. The concurrent findings are significant because they provide molecular evidence that appears to overturn a longstanding consensus, based on the study of anatomical features, regarding how the major groups of sloths are related to one another. Corresponding authors Ross D. E. MacPhee of the American Museum of Natural History and Frédéric Delsuc of the French National Centre for Scientific Research (CNRS) at the (more) 2 University of Montpellier noted that, although their research groups worked separately, they were in communication. “All of us were initially surprised by our results because they thoroughly contradicted what seemed to be the accepted view based on anatomy,” said Delsuc. “Exceptional results demand exceptional verification,” continued MacPhee, a curator in the Museum’s -
I1/Erwnjimllseltm PUBLISHED by the AMERICAN MUSEUM of NATURAL HISTORY CENTRAL PARK WEST at 79TH STREET, NEW YORK 24, N.Y
Loxftatei1/erwnJIMllseltm PUBLISHED BY THE AMERICAN MUSEUM OF NATURAL HISTORY CENTRAL PARK WEST AT 79TH STREET, NEW YORK 24, N.Y. NUMBER 1759 MARCH 8, 1956 Zoogeography of West Indian Land Mammals BY GEORGE GAYLORD SIMPSON INTRODUCTION The West Indies today are extremely poor in living native land mam- mals, so poor that discussion of their zoogeography on that basis alone would lack substance. There is, however, a considerable number of re- cently extinct land mammals known from caves and other deposits. Some of the deposits show a sequence from probable late Pleistocene onward, but the great majority if not all of the genera so preserved survived into the beginning of the geological epoch Recent. At the level of genera, at least, all may thus reasonably be taken as forming a single early recent fauna. Their zoogeography is discussed on that basis. This essay is not, in any case, concerned with species. The species are with a single excep- tion (Isolobodon portoricensis on Hispaniola and Puerto Rico) endemic on each of the larger islands. Their geography has its own interest, but the zoogeography of the islands as a whole concerns the genera and higher categories. Discussion is, further, almost confined to the four main islands of the Greater Antilles: Jamaica, Cuba, Hispaniola, and Puerto Rico. The limited scope of this study excludes bats. Their zoo- geography in the West Indies is of exceptional interest and is being studied by Koopman and others, but it is a separate topic. Animals known to have been introduced by man are of course also excluded. -
Venom Use in Eulipotyphlans: an Evolutionary and Ecological Approach
toxins Review Venom Use in Eulipotyphlans: An Evolutionary and Ecological Approach Krzysztof Kowalski 1 and Leszek Rychlik 2,* 1 Department of Vertebrate Zoology and Ecology, Institute of Biology, Faculty of Biological and Veterinary Sciences, Nicolaus Copernicus University in Toru´n,87-100 Toru´n,Poland; [email protected] 2 Department of Systematic Zoology, Institute of Environmental Biology, Faculty of Biology, Adam Mickiewicz University in Pozna´n,61-614 Pozna´n,Poland * Correspondence: [email protected] Abstract: Venomousness is a complex functional trait that has evolved independently many times in the animal kingdom, although it is rare among mammals. Intriguingly, most venomous mammal species belong to Eulipotyphla (solenodons, shrews). This fact may be linked to their high metabolic rate and a nearly continuous demand of nutritious food, and thus it relates the venom functions to facilitation of their efficient foraging. While mammalian venoms have been investigated using biochemical and molecular assays, studies of their ecological functions have been neglected for a long time. Therefore, we provide here an overview of what is currently known about eulipotyphlan venoms, followed by a discussion of how these venoms might have evolved under ecological pressures related to food acquisition, ecological interactions, and defense and protection. We delineate six mutually nonexclusive functions of venom (prey hunting, food hoarding, food digestion, reducing intra- and interspecific conflicts, avoidance of predation risk, weapons in intraspecific competition) and a number of different subfunctions for eulipotyphlans, among which some are so far only hypothetical while others have some empirical confirmation. The functions resulting from the need Citation: Kowalski, K.; Rychlik, L.