A Brief History of New Phytologist
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Conceptual Barriers to Progress Within Evolutionary Biology
Found Sci (2009) 14:195–216 DOI 10.1007/s10699-008-9153-8 Conceptual Barriers to Progress Within Evolutionary Biology Kevin N. Laland · John Odling-Smee · Marcus W. Feldman · Jeremy Kendal Published online: 26 November 2008 © Springer Science+Business Media B.V. 2008 Abstract In spite of its success, Neo-Darwinism is faced with major conceptual barriers to further progress, deriving directly from its metaphysical foundations. Most importantly, neo- Darwinism fails to recognize a fundamental cause of evolutionary change, “niche construc- tion”. This failure restricts the generality of evolutionary theory, and introduces inaccuracies. It also hinders the integration of evolutionary biology with neighbouring disciplines, includ- ing ecosystem ecology, developmental biology, and the human sciences. Ecology is forced to become a divided discipline, developmental biology is stubbornly difficult to reconcile with evolutionary theory, and the majority of biologists and social scientists are still unhappy with evolutionary accounts of human behaviour. The incorporation of niche construction as both a cause and a product of evolution removes these disciplinary boundaries while greatly generalizing the explanatory power of evolutionary theory. Keywords Niche construction · Evolutionary biology · Ecological inheritance · Ecosystem ecology · Developmental biology 1 Introduction On the face of it, evolutionary biology is a thriving discipline: It is built on the solid theoret- ical foundations of mathematical population biology; it has a rich and productive empirical K. N. Laland (B) School of Biology, University of St. Andrews, Bute Building, Queens Terrace, St. Andrews, Fife KY16 9TS, UK e-mail: [email protected] J. Odling-Smee Mansfield College, University of Oxford, Oxford OX1 3TF, UK M. -
Bloomsbury Scientists Ii Iii
i Bloomsbury Scientists ii iii Bloomsbury Scientists Science and Art in the Wake of Darwin Michael Boulter iv First published in 2017 by UCL Press University College London Gower Street London WC1E 6BT Available to download free: www.ucl.ac.uk/ ucl- press Text © Michael Boulter, 2017 Images courtesy of Michael Boulter, 2017 A CIP catalogue record for this book is available from the British Library. This book is published under a Creative Commons Attribution Non-commercial Non-derivative 4.0 International license (CC BY-NC-ND 4.0). This license allows you to share, copy, distribute and transmit the work for personal and non-commercial use providing author and publisher attribution is clearly stated. Attribution should include the following information: Michael Boulter, Bloomsbury Scientists. London, UCL Press, 2017. https://doi.org/10.14324/111.9781787350045 Further details about Creative Commons licenses are available at http://creativecommons.org/licenses/ ISBN: 978- 1- 78735- 006- 9 (hbk) ISBN: 978- 1- 78735- 005- 2 (pbk) ISBN: 978- 1- 78735- 004- 5 (PDF) ISBN: 978- 1- 78735- 007- 6 (epub) ISBN: 978- 1- 78735- 008- 3 (mobi) ISBN: 978- 1- 78735- 009- 0 (html) DOI: https:// doi.org/ 10.14324/ 111.9781787350045 v In memory of W. G. Chaloner FRS, 1928– 2016, lecturer in palaeobotany at UCL, 1956– 72 vi vii Acknowledgements My old writing style was strongly controlled by the measured precision of my scientific discipline, evolutionary biology. It was a habit that I tried to break while working on this project, with its speculations and opinions, let alone dubious data. But my old practices of scientific rigour intentionally stopped personalities and feeling showing through. -
Jesse D. Hollister
Ecology and Evolutionary Biology Stony Brook University [email protected] Jesse D. Hollister Education 2009 Ph.D. Biological Sciences, University of California, Irvine 2003 B.A. Biology, Sonoma State University Professional Experience Jan. 2015- Assistant Professor, Dept. of Ecology and Evolutionary Biology, Stony Brook University 2012-2014 Postdoctoral Fellow, Dept. of Ecology and Evolutionary Biology, University of Toronto. Advisors: Stephen Wright, Marc Johnson 2009-2011 Postdoctoral Fellow, Dept. of Organismic and Evolutionary Biology, Harvard University. Advisor: Kirsten Bomblies Publications 13. Hollister, J.D. 2014. Polyploidy: adaptation to the genomic environment. New Phytologist. DOI: 10.1111/nph.12942 12. Hough, J., J.D. Hollister, W. Wang, S.C.H. Barrett, and S.I Wright. 2014. Genetic degeneration of old and young Y chromosomes in the flowering plant Rumex hastatulus. PNAS. 111(21): 7713-7718. 11. Hollister, J.D. 2014. Genomic variation in Arabidopsis: tools and insights from next generation sequencing. Chromosome Research. 1-13. 10. Yant, L. *, J.D. Hollister*, K. Wright, B. Arnold, J. Higgins, F. C. Franklin, and K. Bomblies. 2013. Meiotic adaptation to a genome-doubled state in Arabidopsis arenosa. Curr. Biol. 23(21): R961-63 *Co-first Authors 9. Hollister, J.D., B. Arnold, E. Svedin, K. Xue, B. Dilkes, and K. Bomblies. 2012. Genetic adaptation associated with genome doubling in autotetraploid Arabidopsis arenosa. PLoS Genet. 8(12), e1003093 8. B.C. Hunter, J. D. Hollister, and K. Bomblies. 2012. Epigenetic inheritance: what news for evolution? Curr. Biol. 22(2): R54-55. 7. Hollister, J.D., L. Smith, Y. Guo, F. Ott, D. Weigel, and B. -
Plant Identification and Mapping in the Digital Age: Historical and Contemporary Perspectives
THE MEDIATED CITY CONFERENCE Architecture_MPS; Ravensbourne; Woodbury University Los Angeles: 01—04 October, 2014 PLANT IDENTIFICATION AND MAPPING IN THE DIGITAL AGE: HISTORICAL AND CONTEMPORARY PERSPECTIVES NATHAN HEAVERS VIRGINIA POLYTECHNIC INSTITUTE AND STATE UNIVERSITY ABSTRACT This paper discusses the variety of recent digital media available for the identification and mapping of plants in cities in relation to the history of plant guides and maps. It raises the question: how has our focus on plants- especially their identification and mapping- evolved over the centuries and how might new digital media extend and/or limit our relationships with plants? The paper begins with an historical perspective on the processes of identifying and mapping plants and describes the development of plant books and their changing purposes within the general development of Western culture through a scientific lens. It touches on Theophrastus’ Enquiry into Plants, Dioscorides’ De Materia Medica, Linneaus’ Systema Naturae, and Tansley’s work in ecology. Next, the paper discusses the recent proliferation of locative media for identifying and mapping plants, which use face recognition software, crowd-sourcing, and location-based-services through GIS. These include Leafsnap for plant identification and i-Tree for ecological investigations of vegetation in cities. The paper concludes that in every era, human interests in plants and the media we’ve devised to investigate plants have been knit together. The 21st century is no different and the new digital media will be of great use in addressing issues as complex as climate change and as basic as identifying fresh fruit in cities. Overall, the new media have the potential to deliver knowledge to people about plants that was formerly hard to get, which may lead to an increase in plant literacy, especially in cities. -
Marx's Ecology in Historical Perspective
Issue 96 of INTERNATIONAL SOCIALISM JOURNAL Published Winter 2002 Copyright © International Socialism Marx's ecology in historical perspective JOHN BELLAMY FOSTER 'For the early Marx the only nature relevant to the understanding of history is human nature... Marx wisely left nature (other than human nature) alone.' These words are from George Lichtheim's influential book Marxism: An Historical and Critical Study, first published in 1961.1 Though he was not a Marxist, Lichtheim's view here did not differ from the general outlook of Western Marxism at the time he was writing. Yet this same outlook would be regarded by most socialists today as laughable. After decades of explorations of Marx's contributions to ecological discussions and publication of his scientific-technical notebooks, it is no longer a question of whether Marx addressed nature, and did so throughout his life, but whether he can be said to have developed an understanding of the nature-society dialectic that constitutes a crucial starting point for understanding the ecological crisis of capitalist society.2 A great many analysts, including some self styled eco-socialists, are prepared to acknowledge that Marx had profound insights into the environmental problem, but nonetheless argue that these insights were marginal to his work, that he never freed himself from 'Prometheanism' (a term usually meant to refer to an extreme commitment to industrialisation at any cost), and that he did not leave a significant ecological legacy that carried forward into later socialist thought or that had any relation to the subsequent development of ecology.3 In a recent discussion in the journal Capitalism, Nature, Socialism a number of authors argued that Marx could not have contributed anything of fundamental relevance to the development of ecological thought, since he wrote in the 19th century, before the nuclear age and before the appearance of PCBs, CFCs and DDT--and because he never used the word 'ecology' in his writings. -
Protecting the Crown: a Century of Resource Management in Glacier National Park
Protecting the Crown A Century of Resource Management in Glacier National Park Rocky Mountains Cooperative Ecosystem Studies Unit (RM-CESU) RM-CESU Cooperative Agreement H2380040001 (WASO) RM-CESU Task Agreement J1434080053 Theodore Catton, Principal Investigator University of Montana Department of History Missoula, Montana 59812 Diane Krahe, Researcher University of Montana Department of History Missoula, Montana 59812 Deirdre K. Shaw NPS Key Official and Curator Glacier National Park West Glacier, Montana 59936 June 2011 Table of Contents List of Maps and Photographs v Introduction: Protecting the Crown 1 Chapter 1: A Homeland and a Frontier 5 Chapter 2: A Reservoir of Nature 23 Chapter 3: A Complete Sanctuary 57 Chapter 4: A Vignette of Primitive America 103 Chapter 5: A Sustainable Ecosystem 179 Conclusion: Preserving Different Natures 245 Bibliography 249 Index 261 List of Maps and Photographs MAPS Glacier National Park 22 Threats to Glacier National Park 168 PHOTOGRAPHS Cover - hikers going to Grinnell Glacier, 1930s, HPC 001581 Introduction – Three buses on Going-to-the-Sun Road, 1937, GNPA 11829 1 1.1 Two Cultural Legacies – McDonald family, GNPA 64 5 1.2 Indian Use and Occupancy – unidentified couple by lake, GNPA 24 7 1.3 Scientific Exploration – George B. Grinnell, Web 12 1.4 New Forms of Resource Use – group with stringer of fish, GNPA 551 14 2.1 A Foundation in Law – ranger at check station, GNPA 2874 23 2.2 An Emphasis on Law Enforcement – two park employees on hotel porch, 1915 HPC 001037 25 2.3 Stocking the Park – men with dead mountain lions, GNPA 9199 31 2.4 Balancing Preservation and Use – road-building contractors, 1924, GNPA 304 40 2.5 Forest Protection – Half Moon Fire, 1929, GNPA 11818 45 2.6 Properties on Lake McDonald – cabin in Apgar, Web 54 3.1 A Background of Construction – gas shovel, GTSR, 1937, GNPA 11647 57 3.2 Wildlife Studies in the 1930s – George M. -
Sir Arthur Tansley, FRS, 1871-1955
third comes from private sources and two-thirds from the government in various grants and contracts for specific tasks. Washington, D. C. Herbert C. Hanson April 12, 1956 Representative of the Ecological Society of America to the National Academy of Sciences, National Research Council. RESOLUTION OF RESPECT SIR ARTHUR TANSLEY, F. R. S. 1871-1955 Sir Arthur Tansley, one of the founders and past president of the British Ecological Society, died on November 25, 1955. For over fifty years he was a leader in British botany and ecology and early was acclaimed interna tionally. In 1902 he initiated the periodical, The New Phytologist, both edit ing and publishing it during its early years. From 1916 to 1937 he edited the Journal of Ecology. He wrote several books ("Types of British Vegetation," "Elements of Plant Biology," "Aims and Methods in the Study of Plant Ecology" (with T. F. Chipp), "Practical Plant Ecology," "The British Isles and Their Vegeta tion," "Our Heritage of Wild Nature," and others) which became widely known and used. His book "The New Psychology" written after a period in Vienna with Prof. Freud did much to publicize the Freudian theories. He was educated at Highgate School, University College, London and Trinity College, Cambridge. He taught at University College of London, then at Cambridge, and in 1927 was elected Sherardian professor of botany and fellow of Magdalen College at Oxford. Following his retirement in 1937, he devoted himself to writing and in 1943 became head of the British Nature Conservancy. He was honored by election to the Royal Society in 1915, to an honorary fellowship at Trinity College, Cambridge, in 1944 and received a knighthood in 1950. -
Tansley Insight Rapid Evolution in Plant–Microbe Interactions – an Evolutionary Genomics Perspective
Review Tansley insight Rapid evolution in plant–microbe interactions – an evolutionary genomics perspective Author for correspondence: Sophie de Vries1 , Eva H. Stukenbrock2,3 and Laura E. Rose1 Laura E. Rose 1 € € € Tel: +49 211 81 13406 Institute of Population Genetics, Heinrich Heine University Dusseldorf, Universitatsstraße 1 40225, Dusseldorf, Germany; Email: [email protected] 2Environmental Genomics, Max Planck Institute for Evolutionary Biology, Pl€on, Germany; 3The Botanical Institute, Christian- Received: 6 May 2019 Albrechts University of Kiel, Am Botanischen Garden 9-11 24118, Kiel, Germany Accepted: 13 January 2020 Contents Summary 1256 VI. The role of reticulate evolution 1258 I. Introduction 1256 VII. Concluding comments 1260 II. Signatures of selection 1257 Acknowledgements 1260 III. Convergent evolution 1257 References 1261 IV. Cryptic genetic variation 1258 V. Evidence of host jumps 1258 Summary New Phytologist (2020) 226: 1256–1262 Access to greater genomic resolution through new sequencing technologies is transforming the doi: 10.1111/nph.16458 field of plant pathology. As scientists embrace these new methods, some overarching patterns and observations come into focus. Evolutionary genomic studies are used to determine not only Key words: co-evolution, convergent the origins of pathogen lineages and geographic patterns of genetic diversity, but also to discern evolution, crop protection, genetic variation, how natural selection structures genetic variation across the genome. With greater and greater natural selection, phytopathogens. resolution, we can now pinpoint the targets of selection on a large scale. At multiple levels, crypsis and convergent evolution are evident. Host jumps and shifts may be more pervasive than once believed, and hybridization and horizontal gene transfer (HGT) likely play important roles in the emergence of genetic novelty. -
Using Phylogenetics to Detect Pollinatormediated Floral Evolution
New Review Phytologist Research review Using phylogenetics to detect pollinator-mediated floral evolution Author for correspondence: Stacey DeWitt Smith Stacey DeWitt Smith Department of Biology, Duke University, Durham, NC 27708, USA Tel: +1 919 684 3378 Email: [email protected] Received: 28 February 2010 Accepted: 6 April 2010 Summary New Phytologist (2010) 188: 354–363 The development of comparative phylogenetic methods has provided a powerful doi: 10.1111/j.1469-8137.2010.03292.x toolkit for addressing adaptive hypotheses, and researchers have begun to apply these methods to test the role of pollinators in floral evolution and diversification. Key words: ancestral state reconstruction, One approach is to reconstruct the history of both floral traits and pollination sys- diversification, floral evolution, phylogenetic tems to determine if floral trait change is spurred by shifts in pollinators. Looking generalized least squares, phylogenetics, across multiple shifts, it is also possible to test for significant correlations between pollination system, stochastic mapping, floral evolution and pollinators using parsimony, likelihood and Bayesian methods transition rate. for discrete characters or using statistical comparative methods for continuous characters. Evolutionary shifts in pollinators and floral traits may cause changes in diversification rates, and new methods are available for simultaneously studying character evolution and diversification rates. Relatively few studies have yet used formal comparative methods to elucidate how pollinators affect floral evolution across the phylogeny, and fruitful directions for future applications are discussed. consistent with the idea that these syndromes reflect floral Introduction adaptation (Stebbins, 1970; Fenster et al., 2004). These Comparative analysis has a long history in the study of comparative studies of floral morphology and pollination plant–pollinator interactions. -
BOTANY 2019, AJB Reports for Associate Editors
BOTANY 2019, AJB Reports for Associate Editors Background Information for the Annual Meeting in Tucson, Arizona, Starr Pass Resort, Executive Boardroom 2 Monday, 29 July 2019 Confidential for the Editorial Board _______________________ Last year, we were in the midst of our transition from self-publishing the American Journal of Botany and Applications in Plant Sciences to partnering with the commercial publisher Wiley & Sons. We are pleased to report that we have made a lot of progress over the past year, and our partnership continues to evolve. • Partnership with Wiley, significant achievements over the past year o Strategy Day for AJB and APPS, January 2019, Chicago: goal of raising the profiles of the journals while supporting our mission and our members. Attendees included 4 representatives from Wiley and 13 from BSA (editors and publication-affiliated members). § Key Takeaways and focus for the next 1-2 years: Impact Factors need to increase to help attract new MSS and to raise stature of the journals; our International Reach needs to expand, through discoverability and outreach; and we need to Adapt to Changing Markets, which are moving toward more open. • IF: Review articles help garner citations—so we are launching AJB Reviews in 2019, with first papers to publish in 2020. Effort led by Jannice Friedman, with help from Bill Hoffmann, Paul Kenrick, Cate Macinnis-Ng, Emily Sessa, and Nina Sletvold. [See author guidelines for more information.] In addition, we continue to try to attract papers through excellent service to our authors. • International Reach: Author campaigns and Virtual Issues; Search Engine Optimization, improvements to the website to make articles easy to access and the site more navigable; continued social media outreach; recruitment of AEs from outside of North America; author workshop in Ecuador (2018) and Mexico (October 2019). -
History of Plant Ecology
History of Plant Ecology Plato and Aristotle From Raphael’s fresco “The School of Athens”, ca. 350 BC 8/26/09 1 Early Philosophers • Plato recognized erosion during his time. “Our land, compared with what it was, is like a skeleton of a body wasted by disease. The plump soft parts have vanished, and all that remains is the bare carcass.” • Aristotle believed that nature was pp;rovident; extinction could not occur • Theophrastus, considered the father of Botany, determined that some plants were found in certain regions and not others (plant geography) • In 70 BC, Lucretius wrote about succession in his book “On the Nature of Things.” 8/26/09 2 Age of Exploration • Plant geographers played an important role in the 18th and 19th centuries • They observed PATTERNS of plant species distributions over elevation and climatic gradients • Alexander von Humboldt was one of the most famous; born in the late 1700s in Prussia (which became Germany) • In South America, he explored the Orinoco and Amazon Rivers, climbed Mount Chimborazo in Ecuador (21,000’), and brought back 60,000 plant specimens • He had inherited a fortune, and spent it on travel and publishing his books. – Plant Geography, published in 1807 – Five-volume encyclopedia “Kosmos” was his last 8/26/09 3 1 Baron von Humboldt • Attributed vegetation zonation in the tropics to: – Temperature – Humidity – Atmospheric Pressure (!) – Electrical Charge (!) • Visited President Thomas Jefferson in 1804; he encouraged support of the Lewis and Clark Expedition (later, Jefferson explored the Alps -
Peter G. Ayres. Shaping Ecology: the Life of Arthur Tansley. Shaping Ecology: the Life of Arthur Tansley by Peter G
Peter G. Ayres. Shaping Ecology: The Life of Arthur Tansley. Shaping Ecology: The Life of Arthur Tansley by Peter G. Ayres Review by: Peder Anker Isis, Vol. 105, No. 2 (June 2014), pp. 446-447 Published by: The University of Chicago Press on behalf of The History of Science Society Stable URL: http://www.jstor.org/stable/10.1086/678012 . Accessed: 01/09/2014 10:04 Your use of the JSTOR archive indicates your acceptance of the Terms & Conditions of Use, available at . http://www.jstor.org/page/info/about/policies/terms.jsp . JSTOR is a not-for-profit service that helps scholars, researchers, and students discover, use, and build upon a wide range of content in a trusted digital archive. We use information technology and tools to increase productivity and facilitate new forms of scholarship. For more information about JSTOR, please contact [email protected]. The University of Chicago Press and The History of Science Society are collaborating with JSTOR to digitize, preserve and extend access to Isis. http://www.jstor.org This content downloaded from 216.165.95.66 on Mon, 1 Sep 2014 10:04:37 AM All use subject to JSTOR Terms and Conditions 446 BOOK REVIEWS—ISIS, 105 : 2 (2014) more when they became part of the Hindu social for example, how the tapping of keys, the reform movement’s drive to uplift women. Re- pulling of levers, and the pushing of buttons formers successfully urged middle-class women affected the conception of writing as a hand- to take up sewing both as a modern domestic crafted, manual exercise.