Supplementary Table S4 - downregulated by anti-MYCN PNA ProbeID Symbol Description RH30ctrl_SignalRH30mut__SignalRH30pna_Signalpna vs mut pna vs ctrl 210842_at NRP2 neuropilin 2 109.8 83.2 3.4 -4.613 -5.013 219239_s_at ZNF654 654 155.9 140.8 6.8 -4.372 -4.519 220786_s_at SLC38A4 solute carrier family 38, member 4 91.8 135.1 17.7 -2.932 -2.375 206205_at MPHOSPH9 M-phase phosphoprotein 9 208.2 235.7 39.2 -2.588 -2.409 201171_at ATP6V0E ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e 93.5 105 19.1 -2.459 -2.291 204732_s_at TRIM23 tripartite motif-containing 23 132.9 126.3 31 -2.027 -2.100 221079_s_at METTL2B like 2B 141.8 236.9 58.8 -2.010 -1.270 216971_s_at PLEC1 1, intermediate filament binding protein 500kDa 170 176.3 44.7 -1.980 -1.927 221703_at BRIP1 BRCA1 interacting protein C-terminal 1 137 200.4 52.6 -1.930 -1.381 213647_at DNA2L DNA2 DNA replication helicase 2-like (yeast) 180.5 226.1 61.4 -1.881 -1.556 217547_x_at ZNF675 zinc finger protein 675 89.6 93.3 26 -1.843 -1.785 209865_at SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 191.6 171.3 50.4 -1.765 -1.927 AFFX-M27830_5_atSOX18 SRY (sex determining region Y)-box 18 755.4 982.7 295.8 -1.732 -1.353 212177_at C6orf111 6 open reading frame 111 453.6 484.7 147.8 -1.713 -1.618 211088_s_at PLK4 polo-like kinase 4 (Drosophila) 174.6 122.1 37.4 -1.707 -2.223 213880_at LGR5 leucine-rich repeat-containing -coupled receptor 5 172 178 56.2 -1.663 -1.614 201534_s_at UBL3 ubiquitin-like 3 948 900.4 287.1 -1.649 -1.723 219787_s_at ECT2 epithelial cell transforming sequence 2 oncogene 590.7 640.6 205.5 -1.640 -1.523 206852_at EPHA7 EPH receptor A7 287.7 292.6 97 -1.593 -1.569 201083_s_at BCLAF1 BCL2-associated transcription factor 1 338.7 405.8 135.5 -1.582 -1.322 204873_at PEX1 peroxisome biogenesis factor 1 349.9 487.7 164.2 -1.571 -1.091 214429_at MTMR6 myotubularin related protein 6 1213.5 830.9 291.5 -1.511 -2.058 200733_s_at PTP4A1 protein tyrosine phosphatase type IVA, member 1 1139.7 1289.3 457.9 -1.493 -1.316 201437_s_at EIF4E eukaryotic translation initiation factor 4E 1195.8 1312 466.3 -1.492 -1.359 40612_at DOPEY1 dopey family member 1 77.1 107.5 38.6 -1.478 -0.998 218772_x_at TMEM38B transmembrane protein 38B 489.4 505.1 181.4 -1.477 -1.432 221568_s_at LIN7C lin-7 homolog C (C. elegans) 1105.3 1300.6 468.9 -1.472 -1.237 204525_at PHF14 PHD finger protein 14 189.1 241 86.9 -1.472 -1.122 212930_at ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 777.7 868.4 313.3 -1.471 -1.312 203078_at CUL2 cullin 2 166.1 155.6 56.2 -1.469 -1.563 213118_at KIAA0701 271 231.6 83.7 -1.468 -1.695 222250_s_at C1orf73 open reading frame 73 355.3 397.8 144.4 -1.462 -1.299 215385_at FTO 175.8 214.3 78 -1.458 -1.172 205964_at ZNF426 zinc finger protein 426 267.5 242.9 88.7 -1.453 -1.593 214155_s_at LARP4 La ribonucleoprotein domain family, member 4 404 494 182.5 -1.437 -1.146 218649_x_at SDCCAG1 serologically defined colon cancer antigen 1 605.4 575.4 213 -1.434 -1.507 203791_at DMXL1 Dmx-like 1 188.6 145.4 53.9 -1.432 -1.807 32723_at CSTF1 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa 657.5 805.5 298.7 -1.431 -1.138 206770_s_at SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 280.9 282.6 104.9 -1.430 -1.421 215143_at FLJ36166 119.9 104.1 38.7 -1.428 -1.631 212927_at SMC5L1 SMC5 structural maintenance of 5-like 1 (yeast) 475.4 534.7 199.8 -1.420 -1.251 203049_s_at KIAA0372 KIAA0372 711.6 769.9 288 -1.419 -1.305 215936_s_at KIAA1033 KIAA1033 433.1 333.5 125 -1.416 -1.793 212388_at USP24 ubiquitin specific peptidase 24 733.9 770.1 292.4 -1.397 -1.328 213049_at GARNL1 GTPase activating Rap/RanGAP domain-like 1 372.5 377 143.5 -1.394 -1.376 214306_at OPA1 optic atrophy 1 (autosomal dominant) 433.2 419.2 159.7 -1.392 -1.440 213225_at PPM1B protein phosphatase 1B (formerly 2C), magnesium-dependent, beta isoform 663.3 940.4 359.8 -1.386 -0.882 209314_s_at HBS1L HBS1-like (S. cerevisiae) 328.2 298.4 114.5 -1.382 -1.519 213372_at PAQR3 progestin and adipoQ receptor family member III 842.2 1211.4 466.3 -1.377 -0.853 212984_at ATF2 activating transcription factor 2 302.8 266.2 102.9 -1.371 -1.557 209551_at YIPF4 Yip1 domain family, member 4 383.1 367.1 142.7 -1.363 -1.425 218196_at OSTM1 associated transmembrane protein 1 618 612.2 238.9 -1.358 -1.371 212060_at SR140 731.8 696.7 272.7 -1.353 -1.424 206555_s_at THUMPD1 THUMP domain containing 1 981.4 967.3 379.2 -1.351 -1.372 216609_at TXN thioredoxin 466.4 521.4 204.5 -1.350 -1.189 219439_at C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-, 1 389.1 501.4 197.4 -1.345 -0.979 205430_at BMP5 bone morphogenetic protein 5 567.9 552.6 217.7 -1.344 -1.383 209657_s_at HSF2 heat shock transcription factor 2 684.2 780.2 309.2 -1.335 -1.146 208653_s_at CD164 CD164 antigen, sialomucin 725.1 737.2 292.5 -1.334 -1.310 201151_s_at MBNL1 muscleblind-like (Drosophila) 343.1 385.9 153.3 -1.332 -1.162 210281_s_at ZNF198 zinc finger protein 198 220.9 200.5 80.2 -1.322 -1.462 215629_s_at KIAA1799 1369.5 1290.3 522 -1.306 -1.392 208883_at EDD1 E3 ubiquitin protein ligase, HECT domain containing, 1 316.1 338.6 137.2 -1.303 -1.204 218352_at RCBTB1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 528.6 586.9 239.1 -1.296 -1.145 212569_at SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 468.8 430.9 176.6 -1.287 -1.408 219625_s_at COL4A3BP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 391.7 334.4 137.4 -1.283 -1.511 210293_s_at SEC23B Sec23 homolog B (S. cerevisiae) 1138.4 878.3 362.2 -1.278 -1.652 220295_x_at DEPDC1 DEP domain containing 1 360.3 464.3 191.8 -1.275 -0.910 218578_at CDC73 cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 322.9 307.7 127.2 -1.274 -1.344 204342_at SLC25A24 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 1658.1 2225.4 924.6 -1.267 -0.843 212917_x_at FLJ22028 648.7 714.3 297.2 -1.265 -1.126 200841_s_at EPRS glutamyl-prolyl-tRNA synthetase 343.6 347.5 144.6 -1.265 -1.249 202259_s_at PFAAP5 778.2 821.2 343.3 -1.258 -1.181 203510_at MET met proto-oncogene (hepatocyte growth factor receptor) 2448.9 2994.1 1253.9 -1.256 -0.966 202034_x_at RB1CC1 RB1-inducible coiled-coil 1 357.2 391.2 164.1 -1.253 -1.122 59644_at BMP2K BMP2 inducible kinase 307.2 302.3 127.1 -1.250 -1.273 221749_at YTHDF3 YTH domain family, member 3 1406.8 1386 588.4 -1.236 -1.258 205122_at TMEFF1 transmembrane protein with EGF-like and two follistatin-like domains 1 739.3 1184.6 503.2 -1.235 -0.555 200685_at SFRS11 splicing factor, arginine/serine-rich 11 359.1 386.4 164.2 -1.235 -1.129 205091_x_at RECQL RecQ protein-like (DNA helicase Q1-like) 367.4 430.5 184.2 -1.225 -0.996 212417_at SCAMP1 secretory carrier membrane protein 1 311.2 292.9 125.8 -1.219 -1.307 203525_s_at APC adenomatosis polyposis coli 263.6 286.1 122.9 -1.219 -1.101 218311_at MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3 700.3 892 383.9 -1.216 -0.867 214658_at TMED7 transmembrane emp24 protein transport domain containing 7 601 566.3 244.6 -1.211 -1.297 218875_s_at FBXO5 F-box protein 5 849.8 1005.6 435.9 -1.206 -0.963 202933_s_at YES1 v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1 3271.6 3247.5 1412 -1.202 -1.212 208296_x_at TNFAIP8 tumor necrosis factor, alpha-induced protein 8 509.4 559.1 243.4 -1.200 -1.065 215245_x_at FMR1 fragile X mental retardation 1 3125.6 4346.9 1901.8 -1.193 -0.717 203651_at ZFYVE16 zinc finger, FYVE domain containing 16 575.9 824.4 361.1 -1.191 -0.673 212179_at C6orf111 open reading frame 111 1048.5 874.6 383.9 -1.188 -1.450 203970_s_at PEX3 peroxisomal biogenesis factor 3 335.8 347.5 152.6 -1.187 -1.138 214804_at FSHPRH1 FSH primary response (LRPR1 homolog, rat) 1 393.7 439.7 193.6 -1.183 -1.024 203276_at LMNB1 B1 1675.9 2259.4 998.1 -1.179 -0.748 204832_s_at BMPR1A bone morphogenetic protein receptor, type IA 368.2 378.5 167.4 -1.177 -1.137 209681_at SLC19A2 solute carrier family 19 (thiamine transporter), member 2 763.5 901.4 398.9 -1.176 -0.937 221596_s_at DKFZP564O0523 257.2 249.7 110.6 -1.175 -1.218 209004_s_at FBXL5 F-box and leucine-rich repeat protein 5 1104.2 1251.6 557.3 -1.167 -0.986 212636_at QKI quaking homolog, KH domain RNA binding (mouse) 909.1 1235.2 550.1 -1.167 -0.725 213817_at 520.5 534 238.6 -1.162 -1.125 219631_at LRP12 low density lipoprotein-related protein 12 353.5 399.8 179.1 -1.159 -0.981 207719_x_at CEP170 centrosomal protein 170kDa 849.6 1085.7 487 -1.157 -0.803 203830_at C17orf75 open reading frame 75 410.4 500.4 226.2 -1.145 -0.859 212138_at SCC-112 1312.7 1107.1 500.9 -1.144 -1.390 212526_at SPG20 spastic paraplegia 20, spartin (Troyer syndrome) 1076.8 1338.9 606.5 -1.142 -0.828 218490_s_at ZNF302 zinc finger protein 302 576.3 582.8 264.9 -1.138 -1.121 220327_at VGLL3 vestigial like 3 (Drosophila) 345.4 343 156.1 -1.136 -1.146 212420_at ELF1 E74-like factor 1 (ets domain transcription factor) 271.8 272.5 124.2 -1.134 -1.130 221931_s_at SEH1L SEH1-like (S. cerevisiae) 1632.7 1843.2 840.4 -1.133 -0.958 213325_at PVRL3 poliovirus receptor-related 3 246.5 248.9 113.5 -1.133 -1.119 206853_s_at MAP3K7 mitogen-activated protein kinase kinase kinase 7 723.2 643.8 293.6 -1.133 -1.301 221510_s_at GLS glutaminase 1144 1572.9 718.1 -1.131 -0.672 214764_at KIAA0507 KIAA0507 319.3 249.3 114 -1.129 -1.486 202342_s_at TRIM2 tripartite motif-containing 2 379 436.6 200.2 -1.125 -0.921 204492_at ARHGAP11ARho GTPase activating protein 11A 195.1 186.2 85.4 -1.125 -1.192 211967_at TMEM123 transmembrane protein 123 2470.9 2546.4 1170.7 -1.121 -1.078 209674_at CRY1 cryptochrome 1 (photolyase-like) 1641.2 1646.6 759.1 -1.117 -1.112 217954_s_at PHF3 PHD finger protein 3 445 479.9 221.6 -1.115 -1.006 213704_at RABGGTB geranylgeranyltransferase, beta subunit 465.5 447.3 207.1 -1.111 -1.168 222270_at SMEK2 187.1 215.6 100 -1.108 -0.904 207145_at GDF8 growth differentiation factor 8 915.2 1953 906.8 -1.107 -0.013 213918_s_at NIPBL Nipped-B homolog (Drosophila) 521.8 573.7 266.9 -1.104 -0.967 209648_x_at SOCS5 suppressor of cytokine signaling 5 404.2 417.8 194.4 -1.104 -1.056 219208_at FBXO11 F-box protein 11 97.4 107.5 50.1 -1.101 -0.959 212511_at PICALM phosphatidylinositol binding clathrin assembly protein 536.1 530.7 247.4 -1.101 -1.116 213000_at MORC3 MORC family CW-type zinc finger 3 430.3 408.1 191.3 -1.093 -1.170 222204_s_at RRN3 RRN3 RNA polymerase I transcription factor homolog (yeast) 662.1 646.2 303.4 -1.091 -1.126 218085_at CHMP5 modifying protein 5 748.3 822.9 386.9 -1.089 -0.952 202304_at FNDC3A fibronectin type III domain containing 3A 1678 1747.4 822 -1.088 -1.030 209748_at SPAST spastin 791 805.4 379.3 -1.086 -1.060 212867_at NCOA2 nuclear receptor coactivator 2 355.7 353.1 166.3 -1.086 -1.097 201330_at RARS arginyl-tRNA synthetase 2937.1 2849.1 1343.6 -1.084 -1.128 206572_x_at ZNF85 zinc finger protein 85 (HPF4, HTF1) 276.8 310 146.4 -1.082 -0.919 214313_s_at EIF5B eukaryotic translation initiation factor 5B 90.8 61.4 29 -1.082 -1.647 202666_s_at ACTL6A -like 6A 1328.4 1440.7 681.1 -1.081 -0.964 219031_s_at NIP7 nuclear import 7 homolog (S. cerevisiae) 591.3 514.4 243.3 -1.080 -1.281 218577_at LRRC40 leucine rich repeat containing 40 1347 1708.5 809 -1.079 -0.736 218323_at RHOT1 ras homolog family, member T1 888.4 1003.8 476.6 -1.075 -0.898 218668_s_at RAP2C RAP2C, member of RAS oncogene family 587.7 590.8 280.6 -1.074 -1.067 204194_at BACH1 BTB and CNC homology 1, basic leucine zipper transcription factor 1 626.6 592.4 281.5 -1.073 -1.154 203603_s_at ZFHX1B zinc finger homeobox 1b 266.8 327.4 155.7 -1.072 -0.777 204146_at RAD51AP1 RAD51 associated protein 1 2001.8 2214 1053.2 -1.072 -0.927 201713_s_at RANBP2 binding protein 2 1343.5 1149.8 547 -1.072 -1.296 222027_at NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 299.5 272.4 129.6 -1.072 -1.208 203283_s_at HS2ST1 heparan sulfate 2-O-sulfotransferase 1 417 470.5 224.1 -1.070 -0.896 202600_s_at NRIP1 nuclear receptor interacting protein 1 731 815.3 389.4 -1.066 -0.909 211698_at CRI1 CREBBP/EP300 inhibitor 1 770.1 874 422.7 -1.048 -0.865 201634_s_at CYB5B cytochrome b5 type B (outer mitochondrial membrane) 823.2 891.8 432 -1.046 -0.930 211563_s_at C19orf2 open reading frame 2 800.5 710.2 344.8 -1.042 -1.215 215127_s_at RBMS1 RNA binding motif, single stranded interacting protein 1 2082.2 2420.4 1176.3 -1.041 -0.824 222239_s_at DDX26 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 310.1 310.3 151.3 -1.036 -1.035 212981_s_at KIAA0738 902.6 1045.7 509.9 -1.036 -0.824 202903_at LSM5 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) 259 306.4 149.7 -1.033 -0.791 201877_s_at PPP2R5C protein phosphatase 2, regulatory subunit B (B56), gamma isoform 648.5 677.8 331.5 -1.032 -0.968 218458_at GMCL1L germ cell-less homolog 1 (Drosophila)-like 329.1 305 149.4 -1.030 -1.139 204208_at RNGTT RNA guanylyltransferase and 5'-phosphatase 591.6 684.7 335.5 -1.029 -0.818 206613_s_at TAF1A TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa 447.2 334.1 163.8 -1.028 -1.449 218326_s_at LGR4 leucine-rich repeat-containing G protein-coupled receptor 4 718.1 782.1 383.8 -1.027 -0.904 219146_at C17orf42 chromosome 17 open reading frame 42 593.3 785 385.4 -1.026 -0.622 209935_at ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 149.2 250.7 123.4 -1.023 -0.274 215716_s_at ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 2612.5 2627 1295.8 -1.020 -1.012 218721_s_at C1orf27 chromosome 1 open reading frame 27 601.9 534.9 263.9 -1.019 -1.190 202502_at ACADM acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain 1262.5 1592.4 786.5 -1.018 -0.683 217745_s_at MAK3 Mak3 homolog (S. cerevisiae) 2973.8 2971.7 1468.7 -1.017 -1.018 202351_at ITGAV integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51) 4433.8 4929.6 2436.5 -1.017 -0.864 204496_at STRN3 striatin, calmodulin binding protein 3 735.8 739.4 365.5 -1.016 -1.009 201943_s_at CPD carboxypeptidase D 480.9 443.8 219.5 -1.016 -1.132 215509_s_at BUB1 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 491.1 649.8 321.6 -1.015 -0.611 204299_at FUSIP1 FUS interacting protein (serine/arginine-rich) 1 961.1 954.4 473.7 -1.011 -1.021 218446_s_at FAM18B family with sequence similarity 18, member B 1680 1860.9 924.6 -1.009 -0.862 200891_s_at SSR1 signal sequence receptor, alpha (translocon-associated protein alpha) 3322.3 3459.9 1721.9 -1.007 -0.948 218351_at COMMD8 COMM domain containing 8 712.4 815 405.9 -1.006 -0.812 213016_at BBX bobby sox homolog (Drosophila) 657.3 679.8 339.2 -1.003 -0.954 204645_at CCNT2 cyclin T2 513.5 544.4 271.7 -1.003 -0.918 202558_s_at STCH stress 70 protein chaperone, microsome-associated, 60kDa 537.2 470.4 234.9 -1.002 -1.193 214895_s_at ADAM10 ADAM metallopeptidase domain 10 618.7 503.2 251.6 -1.000 -1.298 212637_s_at WWP1 WW domain containing E3 ubiquitin protein ligase 1 258.2 224.1 112.6 -0.993 -1.197 213253_at SMC2L1 SMC2 structural maintenance of chromosomes 2-like 1 (yeast) 768.2 820.7 413 -0.991 -0.895 209115_at UBE1C ubiquitin-activating E1C (UBA3 homolog, yeast) 1070.4 1170.9 591.6 -0.985 -0.855 214710_s_at CCNB1 cyclin B1 4979.8 5093.9 2577.9 -0.983 -0.950 218930_s_at TMEM106B transmembrane protein 106B 283.6 377.1 190.9 -0.982 -0.571 200776_s_at LOC151579 4240.2 3895.4 1975.6 -0.979 -1.102 206667_s_at SCAMP1 secretory carrier membrane protein 1 113.9 127.3 64.6 -0.979 -0.818 215731_s_at MPHOSPH9 M-phase phosphoprotein 9 455.6 537.5 273.1 -0.977 -0.738 219274_at TSPAN12 tetraspanin 12 2188.7 1714.9 872.1 -0.976 -1.328 213598_at HSA9761 799.9 570.8 290.3 -0.975 -1.462 203875_at SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 848.3 982.2 500.1 -0.974 -0.762 212366_at ZNF292 zinc finger protein 292 223.6 269 137 -0.973 -0.707 200934_at DEK DEK oncogene (DNA binding) 3077.5 3132.3 1596.4 -0.972 -0.947 52285_f_at CEP76 centrosomal protein 76kDa 317.4 325 166 -0.969 -0.935 203285_s_at HS2ST1 heparan sulfate 2-O-sulfotransferase 1 626.9 532 271.8 -0.969 -1.206 212476_at CENTB2 centaurin, beta 2 417.8 354.1 181 -0.968 -1.207 218396_at VPS13C vacuolar protein sorting 13C (yeast) 343.3 331 169.2 -0.968 -1.021 218331_s_at C10orf18 open reading frame 18 1281.7 1202.5 615.2 -0.967 -1.059 210970_s_at IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 488.5 517 264.9 -0.965 -0.883 220329_s_at C6orf96 chromosome 6 open reading frame 96 287.8 359.6 184.5 -0.963 -0.641 201617_x_at CALD1 caldesmon 1 821.6 891.3 457.5 -0.962 -0.845 203640_at MBNL2 muscleblind-like 2 (Drosophila) 562.2 552 283.6 -0.961 -0.987 204244_s_at DBF4 DBF4 homolog (S. cerevisiae) 1746.2 1687.2 869.5 -0.956 -1.006 200729_s_at ACTR2 ARP2 actin-related protein 2 homolog (yeast) 2002.5 2836.5 1461.8 -0.956 -0.454 218545_at DKFZP779L1558 885.5 811.4 418.4 -0.956 -1.082 201304_at NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa 1947.5 2057.9 1061.2 -0.955 -0.876 212698_s_at 10-Sep septin 10 1493.7 1525.8 787.1 -0.955 -0.924 218889_at NOC3L nucleolar complex associated 3 homolog (S. cerevisiae) 818.8 780.4 402.6 -0.955 -1.024 212546_s_at FRYL furry homolog-like (Drosophila) 582.3 495.2 255.7 -0.954 -1.187 203566_s_at AGL amylo-1, 6-glucosidase, 4-alpha-glucanotransferase (glycogen debranching enzyme, glycogen storage disease type325 III) 353.1 182.4 -0.953 -0.833 213064_at EML5 echinoderm associated protein like 5 1060.3 1118.6 577.9 -0.953 -0.876 205105_at MAN2A1 mannosidase, alpha, class 2A, member 1 528.4 631.6 326.5 -0.952 -0.695 202006_at PTPN12 protein tyrosine phosphatase, non-receptor type 12 1401.3 1371.4 709 -0.952 -0.983 212888_at DICER1 Dicer1, Dcr-1 homolog (Drosophila) 3420.5 2893.6 1500.7 -0.947 -1.189 219029_at FLJ21657 270.2 290.7 150.9 -0.946 -0.840 203324_s_at CAV2 caveolin 2 601.5 702.7 364.8 -0.946 -0.721 217851_s_at C20orf45 chromosome 20 open reading frame 45 1165.7 1584.9 822.9 -0.946 -0.502 209172_s_at CENPF centromere protein F, 350/400ka (mitosin) 390.3 596.2 309.6 -0.945 -0.334 201712_s_at RANBP2 RAN binding protein 2 550.3 557.2 289.6 -0.944 -0.926 218277_s_at DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40 726.1 888.8 462.5 -0.942 -0.651 202904_s_at LSM5 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) 534.9 575.2 299.5 -0.942 -0.837 200995_at IPO7 importin 7 1466.4 1674 872 -0.941 -0.750 212824_at FUBP3 far upstream element (FUSE) binding protein 3 753.4 976.8 509.3 -0.940 -0.565 209181_s_at RABGGTB Rab geranylgeranyltransferase, beta subunit 4055 3775.5 1970.2 -0.938 -1.041 208673_s_at SFRS3 splicing factor, arginine/serine-rich 3 2679.7 2926.6 1527.5 -0.938 -0.811 221763_at JMJD1C jumonji domain containing 1C 523.9 371.5 193.9 -0.938 -1.434 204049_s_at PHACTR2 phosphatase and actin regulator 2 667.7 616 321.8 -0.937 -1.053 201295_s_at WSB1 WD repeat and SOCS box-containing 1 719.4 777.8 407 -0.934 -0.822 218513_at FLJ11184 154.7 247.8 129.7 -0.934 -0.254 218043_s_at AZI2 5-azacytidine induced 2 259 315.5 165.5 -0.931 -0.646 217941_s_at ERBB2IP erbb2 interacting protein 944.3 835.1 438.2 -0.930 -1.108 219935_at ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 (aggrecanase-2) 1822.6 1872.7 982.7 -0.930 -0.891 218515_at C21orf66 chromosome 21 open reading frame 66 1832.6 1686 885 -0.930 -1.050 211090_s_at PRPF4B PRP4 pre-mRNA processing factor 4 homolog B (yeast) 756.7 660.6 347.1 -0.928 -1.124 218602_s_at FAM29A family with sequence similarity 29, member A 144.9 111.6 58.7 -0.927 -1.304 211733_x_at SCP2 sterol carrier protein 2 1672.7 2024.7 1066.3 -0.925 -0.650 205063_at SIP1 survival of motor neuron protein interacting protein 1 685.2 804.2 424.3 -0.922 -0.691 202930_s_at SUCLA2 succinate-CoA ligase, ADP-forming, beta subunit 2631.5 2385 1258.4 -0.922 -1.064 209404_s_at TMED7 transmembrane emp24 protein transport domain containing 7 544.6 466.5 246.2 -0.922 -1.145 217887_s_at EPS15 epidermal growth factor receptor pathway substrate 15 689.7 883 467.2 -0.918 -0.562 205202_at PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1318.2 1390.9 736.2 -0.918 -0.840 203077_s_at SMAD2 SMAD, mothers against DPP homolog 2 (Drosophila) 354.3 317.1 167.9 -0.917 -1.077 203552_at MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 664.5 610 324 -0.913 -1.036 212709_at NUP160 nucleoporin 160kDa 1108.6 1196.1 635.6 -0.912 -0.803 211137_s_at ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 480.9 516.5 274.7 -0.911 -0.808 213212_x_at LOC440295 833.6 1056.7 562.3 -0.910 -0.568 204783_at MLF1 myeloid leukemia factor 1 300.5 343.5 183 -0.908 -0.716 203881_s_at DMD (muscular dystrophy, Duchenne and Becker types) 1045.4 869.6 463.3 -0.908 -1.174 201889_at FAM3C family with sequence similarity 3, member C 2263.8 2218.1 1182.3 -0.908 -0.937 209243_s_at PEG3 paternally expressed 3 3534.5 4446.2 2374.6 -0.905 -0.574 203493_s_at CEP57 centrosomal protein 57kDa 435.8 426.7 228.3 -0.902 -0.933 218247_s_at RKHD2 ring finger and KH domain containing 2 1404.8 1747.4 936 -0.901 -0.586 213229_at DICER1 Dicer1, Dcr-1 homolog (Drosophila) 4463.4 4457.2 2387.8 -0.900 -0.902 204742_s_at APRIN androgen-induced proliferation inhibitor 348.6 317.5 170.2 -0.900 -1.034 212847_at FUBP1 far upstream element (FUSE) binding protein 1 355.4 422.1 226.3 -0.899 -0.651 208070_s_at REV3L REV3-like, catalytic subunit of DNA polymerase zeta (yeast) 758.5 745.1 399.9 -0.898 -0.924 204831_at CDK8 cyclin-dependent kinase 8 1324.3 1274 684.1 -0.897 -0.953 203820_s_at IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 1506.1 1564 840.2 -0.896 -0.842 213761_at MDM1 Mdm4, transformed 3T3 cell double minute 1, p53 binding protein (mouse) 511.1 413.7 222.3 -0.896 -1.201 211953_s_at RANBP5 RAN binding protein 5 2418.1 2343.8 1261 -0.894 -0.939 213387_at KIAA1240 711.6 660.1 355.3 -0.894 -1.002 202028_s_at RPL38 ribosomal protein L38 2724.7 2967.7 1598.1 -0.893 -0.770 219291_at DTWD1 DTW domain containing 1 162.6 168.2 90.6 -0.893 -0.844 201294_s_at WSB1 WD repeat and SOCS box-containing 1 685.9 711.9 383.8 -0.891 -0.838 210681_s_at USP15 ubiquitin specific peptidase 15 583.5 478.1 257.8 -0.891 -1.178 209523_at TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa 1133.5 1141.2 616.1 -0.889 -0.880 213701_at CEP290 centrosomal protein 290kDa 789.5 697.4 376.9 -0.888 -1.067 201661_s_at ACSL3 acyl-CoA synthetase long-chain family member 3 666.2 704.4 380.8 -0.887 -0.807 208859_s_at ATRX alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) 169.6 227.7 123.1 -0.887 -0.462 212530_at NEK7 NIMA (never in mitosis gene a)-related kinase 7 765.5 780.5 422.2 -0.886 -0.858 212920_at REST RE1-silencing transcription factor 446.9 630.1 340.9 -0.886 -0.391 203403_s_at RNF6 ring finger protein (C3H2C3 type) 6 1546.5 1417.2 766.8 -0.886 -1.012 200626_s_at MATR3 matrin 3 5860.5 6217.7 3365 -0.886 -0.800 213222_at PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 219.3 187.8 101.8 -0.883 -1.107 209095_at DLD dihydrolipoamide dehydrogenase (E3 component of complex, 2-oxo-glutarate complex,2851 branched chain2916.2 keto acid dehydrogenase1583.9 complex)-0.881 -0.848 213469_at PGAP1 258.2 265.9 144.5 -0.880 -0.837 206875_s_at SLK STE20-like kinase (yeast) 324.2 505.7 275 -0.879 -0.237 213425_at WNT5A wingless-type MMTV integration site family, member 5A 459.9 450.1 244.8 -0.879 -0.910 219003_s_at MANEA mannosidase, endo-alpha 156.2 157.9 85.9 -0.878 -0.863 212610_at PTPN11 protein tyrosine phosphatase, non-receptor type 11 (Noonan syndrome 1) 4089.3 4369.4 2377.8 -0.878 -0.782 213734_at WSB2 WD repeat and SOCS box-containing 2 543.7 655.6 356.9 -0.877 -0.607 207090_x_at ZFP30 zinc finger protein 30 homolog (mouse) 314.2 457 249.2 -0.875 -0.334 217100_s_at UBXD7 UBX domain containing 7 313.6 344.5 188 -0.874 -0.738 214700_x_at RIF1 interacting factor homolog (yeast) 462.6 408.1 222.8 -0.873 -1.054 213899_at METAP2 methionyl aminopeptidase 2 547.9 379.7 207.4 -0.872 -1.401 218595_s_at HEATR1 HEAT repeat containing 1 1097.1 988.7 540.8 -0.870 -1.021 213743_at CCNT2 cyclin T2 646.3 626.4 343 -0.869 -0.914 202097_at NUP153 nucleoporin 153kDa 1480.5 1541.3 844.7 -0.868 -0.810 218386_x_at USP16 ubiquitin specific peptidase 16 1498.5 1484.2 813.6 -0.867 -0.881 32069_at N4BP1 401.4 512.2 280.9 -0.867 -0.515 212918_at FLJ22028 726.9 686.9 376.8 -0.866 -0.948 215596_s_at ZNF294 zinc finger protein 294 1482.7 1172.4 643.6 -0.865 -1.204 213694_at RSBN1 round spermatid basic protein 1 520.6 480.6 264.2 -0.863 -0.979 214305_s_at SF3B1 splicing factor 3b, subunit 1, 155kDa 1012.7 1068.2 587.8 -0.862 -0.785 212720_at PAPOLA poly(A) polymerase alpha 583.9 468 257.6 -0.861 -1.181 214943_s_at RBM34 RNA binding motif protein 34 259.5 289.9 159.7 -0.860 -0.700 222119_s_at FBXO11 F-box protein 11 904.6 884.9 488.2 -0.858 -0.890 201664_at SMC4L1 SMC4 structural maintenance of chromosomes 4-like 1 (yeast) 3766.4 3443.4 1902.3 -0.856 -0.985 203341_at CEBPZ CCAAT/enhancer binding protein zeta 1896.1 1485.9 820.9 -0.856 -1.208 200071_at SMNDC1 survival motor neuron domain containing 1 2485.4 2585.9 1428.9 -0.856 -0.799 212633_at KIAA0776 KIAA0776 299.4 308.7 170.8 -0.854 -0.810 220768_s_at CSNK1G3 casein kinase 1, gamma 3 532.1 607.4 336.1 -0.854 -0.663 212634_at KIAA0776 KIAA0776 250.8 221.3 122.5 -0.853 -1.034 215017_s_at FNBP1L formin binding protein 1-like 749.2 784.5 434.8 -0.851 -0.785 219342_at CASD1 CAS1 domain containing 1 473.7 522.8 289.8 -0.851 -0.709 218878_s_at SIRT1 (silent mating type information regulation 2 homolog) 1 (S. cerevisiae) 278.7 318.8 176.8 -0.851 -0.657 203819_s_at IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 1361.1 1408.4 781.6 -0.850 -0.800 201362_at IVNS1ABP influenza virus NS1A binding protein 497.7 474 263.2 -0.849 -0.919 202265_at PCGF4 polycomb group ring finger 4 1995.7 2010.4 1116.4 -0.849 -0.838 213243_at VPS13B vacuolar protein sorting 13B (yeast) 312 394.6 219.3 -0.847 -0.509 203804_s_at CROP 1843.1 1956 1088.2 -0.846 -0.760 202979_s_at ZF 581.5 499.8 278.4 -0.844 -1.063 209780_at PHTF2 putative homeodomain transcription factor 2 1376.6 1361.8 758.8 -0.844 -0.859 201745_at PTK9 PTK9 protein tyrosine kinase 9 1685.2 1628.7 907.9 -0.843 -0.892 203007_x_at LYPLA1 lysophospholipase I 1186.7 1219.5 680.2 -0.842 -0.803 203102_s_at MGAT2 mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 2733.3 3035.5 1696.1 -0.840 -0.688 221765_at UGCG UDP-glucose ceramide 412.4 315.9 176.7 -0.838 -1.223 204237_at GULP1 GULP, engulfment adaptor PTB domain containing 1 1719.2 1602.8 896.8 -0.838 -0.939 208754_s_at NAP1L1 nucleosome assembly protein 1-like 1 3909.3 4869.1 2726.4 -0.837 -0.520 202543_s_at GMFB glia maturation factor, beta 850.3 963.1 539.7 -0.836 -0.656 203910_at ARHGAP29 Rho GTPase activating protein 29 834.2 840.1 471.3 -0.834 -0.824 214766_s_at AHCTF1 AT hook containing transcription factor 1 460.5 281.6 158 -0.834 -1.543 218819_at DDX26 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 553.3 713.3 400.4 -0.833 -0.467 209258_s_at CSPG6 chondroitin sulfate proteoglycan 6 (bamacan) 410.1 442.8 248.7 -0.832 -0.722 213025_at THUMPD1 THUMP domain containing 1 445.4 499.2 280.6 -0.831 -0.667 202158_s_at CUGBP2 CUG triplet repeat, RNA binding protein 2 579.2 617 346.9 -0.831 -0.740 218166_s_at HBXAP hepatitis B virus x associated protein 227.6 166.3 93.5 -0.831 -1.283 217828_at SLTM SAFB-like, transcription modulator 1059.4 941.4 529.4 -0.830 -1.001 202514_at 679.3 644.3 362.6 -0.829 -0.906 212919_at DCP2 DCP2 decapping enzyme homolog (S. cerevisiae) 2169.6 2291.7 1292.4 -0.826 -0.747 202763_at CASP3 caspase 3, apoptosis-related peptidase 778.9 695.2 392.1 -0.826 -0.990 218645_at ZNF277 zinc finger protein 277 377.3 436.7 246.4 -0.826 -0.615 213168_at SP3 Sp3 transcription factor 1706.8 1953.4 1102.9 -0.825 -0.630 217834_s_at SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 1471.2 1379.7 779.7 -0.823 -0.916 222011_s_at ACAT2 acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase) 470.8 630.9 356.6 -0.823 -0.401 201018_at EIF1AX eukaryotic translation initiation factor 1A, X-linked 1499.7 1475 835.3 -0.820 -0.844 218090_s_at BRWD2 and WD repeat domain containing 2 717.7 912.7 517 -0.820 -0.473 221782_at DNAJC10 DnaJ (Hsp40) homolog, subfamily C, member 10 300.1 285.7 162 -0.819 -0.889 210170_at PDLIM3 PDZ and LIM domain 3 384 422 239.3 -0.818 -0.682 204865_at CA3 carbonic anhydrase III, muscle specific 1350 1425.9 808.9 -0.818 -0.739 209451_at TANK TRAF family member-associated NFKB activator 127.4 128.7 73.1 -0.816 -0.801 34031_i_at KRIT1 KRIT1, repeat containing 685.6 560 318.1 -0.816 -1.108 212449_s_at LYPLA1 lysophospholipase I 2050.9 2092.2 1189.4 -0.815 -0.786 204162_at KNTC2 kinetochore associated 2 1267.3 1469.3 836.3 -0.813 -0.600 204709_s_at KIF23 family member 23 1014.9 959 545.9 -0.813 -0.895 201237_at CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 761.5 759.5 432.5 -0.812 -0.816 219736_at TRIM36 tripartite motif-containing 36 152.2 195.8 111.5 -0.812 -0.449 212943_at KIAA0528 KIAA0528 982.8 1039.2 592.1 -0.812 -0.731 201110_s_at THBS1 thrombospondin 1 163.4 188 107.2 -0.810 -0.608 201091_s_at CBX3 chromobox homolog 3 (HP1 gamma homolog, Drosophila) 4075.8 3815.7 2176.9 -0.810 -0.905 212514_x_at DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked 760.1 730.3 417 -0.808 -0.866 208661_s_at TTC3 tetratricopeptide repeat domain 3 1517.2 1775.7 1014.2 -0.808 -0.581 201450_s_at TIA1 TIA1 cytotoxic granule-associated RNA binding protein 878.8 845 483.5 -0.805 -0.862 209642_at BUB1 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 1109.5 1235.9 708 -0.804 -0.648 218239_s_at GTPBP4 GTP binding protein 4 1635.5 1551.5 890.2 -0.801 -0.878 201070_x_at SF3B1 splicing factor 3b, subunit 1, 155kDa 957.8 939.9 539.5 -0.801 -0.828 209757_s_at MYCN v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian) 3313.3 2803.5 2202.4 -0.3482 -0.5892