Response of Lactobacillus Plantarum VAL6 to Challenges of Ph And
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GRAS Notice 735 for 2'-Fucosyllactose
GRAS Notice (GRN) No. 735 https://www.fda.gov/Food/IngredientsPackagingLabeling/GRAS/NoticeInventory/default.htm GRAS Associates, LLC 27499 Riverview Center Blvd. Bonita Springs, FL 34134 GRifS T: 239.444.1724 J F: 239.444.1723 ASSOCIATES, LLC www.gras-associates.com September 29, 2017 GR N 0rf'rrl 3 5 Food and Drug Administration Center for Food Safety & Applied Nutrition Office of Food Additive Safety (HFS-255) 5001 Campus Drive College Park, MD 20740-3835 Attention: Dr. Paulette Gaynor Re: GRAS Notification-2'-Fucosyllactose Dear Dr. Gaynor: GRAS Associates, LLC, acting as the agent for Glycosyn, LLC (Woburn, MA) and FrieslandCampina Domo B.V. (The Netherlands) is submitting for FDA review Form 3667 and the enclosed CD, free of viruses, containing a GRAS notification for 2'-Fucosyllactose produced by microbial fermentation. Along with Glycosyn and FrieslandCampina's determination of safety, an Expert Panel of qualified persons was assembled to assess the composite safety information of the subject substance with the intended use as an ingredient in infant formulas, conventional foods, and medical foods at levels ranging from 0.24 to 4.0 grams 2'-fucosyllactose per serving. The attached documentation contains the specific information that addresses the safe human food uses for the subject notified substance as discussed in the GRAS guidance document. If additional information or clarification is needed as you and your colleagues proceed with the review, please feel free to contact me via telephone or email. We look forward to your feedback. Sincerely, (b) (6) Katrina V. Emmel, Ph.D. Senior Scientist/Associate GRAS Associates, LLC 27499 Riverview Center Blvd., Suite 212 Bonita Springs, FL 34134 OCT 2 2017 951-496-4178 OFFICE OF [email protected] FOOD ADDITIVE SAFETY Enclosure: GRAS Notification for Glycosyn and FrieslandCampina -2'-Fucosyllactose ., Form Approved: OMB No. -
Enhanced Trehalose Production Improves Growth of Escherichia Coli Under Osmotic Stress† J
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, July 2005, p. 3761–3769 Vol. 71, No. 7 0099-2240/05/$08.00ϩ0 doi:10.1128/AEM.71.7.3761–3769.2005 Copyright © 2005, American Society for Microbiology. All Rights Reserved. Enhanced Trehalose Production Improves Growth of Escherichia coli under Osmotic Stress† J. E. Purvis, L. P. Yomano, and L. O. Ingram* Department of Microbiology and Cell Science, Box 110700, University of Florida, Gainesville, Florida 32611 Downloaded from Received 7 July 2004/Accepted 9 January 2005 The biosynthesis of trehalose has been previously shown to serve as an important osmoprotectant and stress protectant in Escherichia coli. Our results indicate that overproduction of trehalose (integrated lacI-Ptac-otsBA) above the level produced by the native regulatory system can be used to increase the growth of E. coli in M9-2% glucose medium at 37°C to 41°C and to increase growth at 37°C in the presence of a variety of osmotic-stress agents (hexose sugars, inorganic salts, and pyruvate). Smaller improvements were noted with xylose and some fermentation products (ethanol and pyruvate). Based on these results, overproduction of trehalose may be a useful trait to include in biocatalysts engineered for commodity chemicals. http://aem.asm.org/ Bacteria have a remarkable capacity for adaptation to envi- and lignocellulose (6, 7, 10, 28, 30, 31, 32, 45). Biobased pro- ronmental stress (39). A part of this defense system involves duction of these renewable chemicals would be facilitated by the intracellular accumulation of protective compounds that improved growth under thermal stress and by increased toler- shield macromolecules and membranes from damage (9, 24). -
Conversion of Carbohydrates to Furfural Via Selective Cleavage Of
Electronic Supplementary Material (ESI) for Green Chemistry. This journal is © The Royal Society of Chemistry 2015 Conversion of carbohydrates to furfural via selective cleavage of carbon-carbon bond: cooperative effect of zeolite and solvent Jinglei Cui,ab Jingjing Tan,ab Tiansheng Deng,a Xiaojing Cui,a Yulei Zhu*ac and Yongwang Liac a State Key Laboratory of Coal Conversion, Institute of Coal Chemistry, Chinese Academy of Sciences, Taiyuan 030001, PR China. E-mail: [email protected]; Fax: +86-351-7560668. b University of Chinese Academy of Sciences, Beijing, 100049, PR China. c Synfuels China Co. Ltd., Beijing, PR China. 1. Materials Cellulose, inulin, starch, sucrose, maltose, D-glucose, D-fructose, D-xylose, D- arabinose, 5-hydromethylfurfural (HMF), formic acid (FA) and levulinic acid (LA) were purchased from Aladdin. γ-valerolactone (GVL), γ-butyrolactone (GBL), 1,4- dioxane, gluconic acid, H2SO4 (98%), Amberlyst-15, AlCl3 and γ-Al2O3 were purchased from Sinopharm Chemical Reagent Co., Ltd.. All the above agents were utilized without further purification. Hβ, HY, H-Mordenite and HZSM-5 zeolite were purchased from The Catalyst Plant of Nankai University. 2. Experiments 2.1 The computational formula The conversion of sugars and the yield of the products were quantified according to the following equations: 푚표푙 표푓 푠푢푔푎푟(푖푛푙푒푡)-푚표푙 표푓 푠푢푔푎푟(표푢푡푙푒푡) Conversion = 푚표푙 표푓 푠푢푔푎푟(푖푛푙푒푡) ×100% 푚표푙 표푓 표푛푒 푝푟표푑푢푐푡 푝푟표푑푢푐푒푑 Yield =푚표푙 표푓 푡ℎ푒표푟푒푡푖푐푎푙 푝푟표푑푢푐푡 푣푎푙푢푒×100% 2.2 Procedures for the catalyst recycling After the first run was completed, the reaction products were centrifuged for 10 min to separate the Hβ zeolite from the solutions. -
The Fischer Proof of the Structure of (+)-Glucose Started in 1888, 12
The Fischer proof of the structure of (+)-glucose Started in 1888, 12 years after the proposal that carbon was tetrahedral, and thus had stereoisomers. Tools: - melting points - optical rotation (determine whether a molecule is optically active) - chemical reactions Fischer knew: - (+)-glucose is an aldohexose. - Therefore, there are 4 stereocenters and 24 = 16 stereoisomers (8 D-sugars and 8 L-sugars) - At this time could not determine the actual configuration (D or L) of sugars - Fischer arbitrarily assigned D-glyceraldehyde the following structure. CHO H OH CH2OH - In 1951 Fischer was shown to have guessed correctly. CO2H CHO H OH HO H HO H CH2OH CO2H L-Tartaric acid L-glyceraldehyde Which of the 8 D-aldohexoses is (+)-glucose??? 1) Oxidation of (+)-glucose with nitric acid gives an aldaric acid, glucaric acid, that is optically active. Therefore (+)-glucose cannot have structures 1 or 7, which would give optically inactive aldaric acids. HNO3 (+)-glucose Glucaric acid Optically active CHO CO2H H OH H OH 1 H OH HNO3 H OH Mirror plane H OH H OH H OH H OH Since these aldaric CH2OH CO2H acids have mirror planes they are meso structures. CHO CO2H They are not optically H OH H OH active HO H HNO3 HO H 7 Mirror plane HO H HO H H OH H OH CH2OH CO2H 2) Ruff degradation of (+)-glucose gives (-)-arabinose. Oxidation of (-)-arabinose with nitric acid gives arabanaric acid, which is optically active. Therefore, (-)-arabinose cannot have structures 9 or 11, which would give optically inactive aldaric acids. If arabinose cannot be 9 or 11, (+)-glucose cannot be 2 (1 was already eliminated), 5 or 6, which would give 9 or 11 in a Ruff degradation. -
Enzymatic Synthesis of L-Fucose from L-Fuculose Using a Fucose Isomerase
Kim et al. Biotechnol Biofuels (2019) 12:282 https://doi.org/10.1186/s13068-019-1619-0 Biotechnology for Biofuels RESEARCH Open Access Enzymatic synthesis of L-fucose from L-fuculose using a fucose isomerase from Raoultella sp. and the biochemical and structural analyses of the enzyme In Jung Kim1†, Do Hyoung Kim1†, Ki Hyun Nam1,2 and Kyoung Heon Kim1* Abstract Background: L-Fucose is a rare sugar with potential uses in the pharmaceutical, cosmetic, and food industries. The enzymatic approach using L-fucose isomerase, which interconverts L-fucose and L-fuculose, can be an efcient way of producing L-fucose for industrial applications. Here, we performed biochemical and structural analyses of L-fucose isomerase identifed from a novel species of Raoultella (RdFucI). Results: RdFucI exhibited higher enzymatic activity for L-fuculose than for L-fucose, and the rate for the reverse reaction of converting L-fuculose to L-fucose was higher than that for the forward reaction of converting L-fucose to L-fuculose. In the equilibrium mixture, a much higher proportion of L-fucose (~ ninefold) was achieved at 30 °C and pH 7, indicating that the enzyme-catalyzed reaction favors the formation of L-fucose from L-fuculose. When biochemical analysis was conducted using L-fuculose as the substrate, the optimal conditions for RdFucI activity were determined to be 40 °C and pH 10. However, the equilibrium composition was not afected by reaction temperature in the range 2 of 30 to 50 °C. Furthermore, RdFucI was found to be a metalloenzyme requiring Mn + as a cofactor. The comparative crystal structural analysis of RdFucI revealed the distinct conformation of α7–α8 loop of RdFucI. -
406-3 Wood Sugars.Pdf
Wood Chemistry Wood Chemistry Wood Carbohydrates l Major Components Wood Chemistry » Hexoses – D-Glucose, D-Galactose, D-Mannose PSE 406/Chem E 470 » Pentoses – D-Xylose, L-Arabinose Lecture 3 » Uronic Acids Wood Sugars – D-glucuronic Acid, D Galacturonic Acid l Minor Components » 2 Deoxy Sugars – L-Rhamnose, L-Fucose PSE 406 - Lecture 3 1 PSE 406 - Lecture 3 2 Wood Chemistry Wood Sugars: L Arabinose Wood Chemistry Wood Sugars: D Xylose l Pentose (5 carbons) CHO l Pentose CHO l Of the big 5 wood sugars, l Xylose is the major constituent of H OH arabinose is the only one xylans (a class of hemicelluloses). H OH found in the L form. » 3-8% of softwoods HO H HO H l Arabinose is a minor wood » 15-25% of hardwoods sugar (0.5-1.5% of wood). HO H H OH CH OH 2 CH2OH PSE 406 - Lecture 3 3 PSE 406 - Lecture 3 4 1 1 Wood Chemistry Wood Sugars: D Mannose Wood Chemistry Wood Sugars: D Glucose CHO l Hexose (6 carbons) CHO l Hexose (6 carbons) l Glucose is the by far the most H OH l Mannose is the major HO H constituent of Mannans (a abundant wood monosaccharide (cellulose). A small amount can HO H class of hemicelluloses). HO H also be found in the » 7-13% of softwoods hemicelluloses (glucomannans) H OH » 1-4% of hardwoods H OH H OH H OH CH2OH CH2OH PSE 406 - Lecture 3 5 PSE 406 - Lecture 3 6 Wood Chemistry Wood Sugars: D Galactose Wood Chemistry Wood Sugars CHO CHO l Hexose (6 carbons) CHO H OH H OH l Galactose is a minor wood D Xylose L Arabinose HO H HO H monosaccharide found in H OH HO H H OH certain hemicelluloses CH2OH HO H CHO CH2OH CHO CHO » 1-6% of softwoods HO H H OH H OH » 1-1.5% of hardwoods HO H HO H HO H HO H HO H H OH H OH H OH H OH H OH H OH CH2OH CH2OH CH2OH CH2OH D Mannose D Glucose D Galactose PSE 406 - Lecture 3 7 PSE 406 - Lecture 3 8 2 2 Wood Chemistry Sugar Numbering System Wood Chemistry Uronic Acids CHO 1 CHO l Aldoses are numbered l Uronic acids are with the structure drawn HO H 2 polyhydroxy carboxylic H OH vertically starting from the aldehydes. -
Multi-Enzymatic Cascades in the Synthesis of Modified Nucleosides
biomolecules Article Multi-Enzymatic Cascades in the Synthesis of Modified Nucleosides: Comparison of the Thermophilic and Mesophilic Pathways Ilja V. Fateev , Maria A. Kostromina, Yuliya A. Abramchik, Barbara Z. Eletskaya , Olga O. Mikheeva, Dmitry D. Lukoshin, Evgeniy A. Zayats , Maria Ya. Berzina, Elena V. Dorofeeva, Alexander S. Paramonov , Alexey L. Kayushin, Irina D. Konstantinova * and Roman S. Esipov Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry RAS, Miklukho-Maklaya 16/10, 117997 GSP, B-437 Moscow, Russia; [email protected] (I.V.F.); [email protected] (M.A.K.); [email protected] (Y.A.A.); [email protected] (B.Z.E.); [email protected] (O.O.M.); [email protected] (D.D.L.); [email protected] (E.A.Z.); [email protected] (M.Y.B.); [email protected] (E.V.D.); [email protected] (A.S.P.); [email protected] (A.L.K.); [email protected] (R.S.E.) * Correspondence: [email protected]; Tel.: +7-905-791-1719 ! Abstract: A comparative study of the possibilities of using ribokinase phosphopentomutase ! nucleoside phosphorylase cascades in the synthesis of modified nucleosides was carried out. Citation: Fateev, I.V.; Kostromina, Recombinant phosphopentomutase from Thermus thermophilus HB27 was obtained for the first time: M.A.; Abramchik, Y.A.; Eletskaya, a strain producing a soluble form of the enzyme was created, and a method for its isolation and B.Z.; Mikheeva, O.O.; Lukoshin, D.D.; chromatographic purification was developed. It was shown that cascade syntheses of modified nu- Zayats, E.A.; Berzina, M.Y..; cleosides can be carried out both by the mesophilic and thermophilic routes from D-pentoses: ribose, Dorofeeva, E.V.; Paramonov, A.S.; 2-deoxyribose, arabinose, xylose, and 2-deoxy-2-fluoroarabinose. -
Synthesis of A-L-Fucose-L-14C (6-Deoxy-L-Galactose-L-14C)
JOU RNAL OF RESEAR CH of t he Na tional Bureau of Standa rds - A. Ph ysi cs a nd Chem istry Vol. 7 1A, No.2, March- April 1967 Synthesis of ex -L-Fucose-I-1 4 C (6-Deoxy-L-galactose-I-14 C) H. S. Isbell, H. L. Frush, and N. a. Holt Institute for Materials Research, National Bureau of Standards, Washington, ·D.C. 20234 (October 31. 1966) ll'-L-Fucose- / -14C was synthesized in a radiochem ical yie ld of 30 perce nl. The synthesis in volved degradati on of nonradioac ti ve L' fu coni c acid to 5-deoxy-L-lyxose a nd synthesis from this of a·L-fu cose· J.14C by use of 14C- labeled cya ni d e in the cyanohydrin reacti on. The resulting epi me ric, 14C· labeled aldoni c acids were separated as eithe r the bari u m o r the sodi u m salt s. Bo th salt s of L·fuconi c acid crystalli ze more readil y tha n the correspond ing salt s of the e pi me ri c 6·deoxY· L·talo ni c acid. T he preparati on of barium L-fu conate b y the electro lyti c ox idati on of L·fucose in the prese nce of bHium car bona te a nd barium bro mi de is descri bed. Key Words: Carbon·14·labeled (.fucose, C· fuconic acid·I . I'C, L-fucose· / · 14C, radi oactive carbo· h ydrates, s ynthesis of radioactive s ugars. -
Determination of Sugar Profiles of Sweetened Foods and Beverages
Journal of Food and Nutrition Research, 2016, Vol. 4, No. 6, 349-354 Available online at http://pubs.sciepub.com/jfnr/4/6/2 ©Science and Education Publishing DOI:10.12691/jfnr-4-6-2 Determination of Sugar Profiles of Sweetened Foods and Beverages Şana SUNGUR*, Yusuf KILBOZ Department of Chemistry, Science and Letters Faculty, Mustafa Kemal University, Hatay, Turkey *Corresponding author: [email protected] Abstract The determination of sugar profile in commonly consumed sweetened foods and beverages (cake, chocolate, jelly tots, cookie, wafer, pudding, fruit yogurt, limon-flavored soda, cola, lemonade, mineral water, fruit juice, milk drink and ice tea) was carried out using high performance liquid chromatography (HPLC). The amount of fructose was found higher than the amount of glucose in most of the foods and beverages (juice, limon-flavored soda, mineral water, cola, chocolate, cookie, wafer). The highest fructose contents were found in cola (71.10 % of sugars), chocolate (52.40 % of sugars) and limon-flavored soda (48.21 % of sugars) samples. The galactose, mannitol, arabinose and xylitol were not detected in any of the examined food and beverage samples. The predominant sugar in milk drinks, jelly tots, pudding, cookie and cake samples was determined as sucrose. Maltitol was only determined in cake and jellytots samples. Keywords: fructose, sweetened foods, sweetened beverages, sugar profile, HPLC Cite This Article: Şana SUNGUR, and Yusuf KILBOZ, “Determination of Sugar Profiles of Sweetened Foods and Beverages.” Journal of Food and Nutrition Research, vol. 4, no. 6 (2016): 349-354. doi: 10.12691/jfnr-4-6-2. The objective of this study was to determine fructose content and sugar profile in commonly consumed 1. -
Cofermentation of Glucose, Xylose and Arabinose by Genomic DNA
GenomicCopyright © DNA–Integrated2002 by Humana Press Zymomonas Inc. mobilis 885 All rights of any nature whatsoever reserved. 0273-2289/02/98-100/0885/$13.50 Cofermentation of Glucose, Xylose, and Arabinose by Genomic DNA–Integrated Xylose/Arabinose Fermenting Strain of Zymomonas mobilis AX101 ALI MOHAGHEGHI,* KENT EVANS, YAT-CHEN CHOU, AND MIN ZHANG Biotechnology Division for Fuels and Chemicals, National Renewable Energy Laboratory, 1617 Cole Boulevard, Golden, CO 80401, E-mail: [email protected] Abstract Cofermentation of glucose, xylose, and arabinose is critical for complete bioconversion of lignocellulosic biomass, such as agricultural residues and herbaceous energy crops, to ethanol. We have previously developed a plas- mid-bearing strain of Zymomonas mobilis (206C[pZB301]) capable of cofer- menting glucose, xylose, and arabinose to ethanol. To enhance its genetic stability, several genomic DNA–integrated strains of Z. mobilis have been developed through the insertion of all seven genes necessay for xylose and arabinose fermentation into the Zymomonas genome. From all the integrants developed, four were selected for further evaluation. The integrants were tested for stability by repeated transfer in a nonselective medium (containing only glucose). Based on the stability test, one of the integrants (AX101) was selected for further evaluation. A series of batch and continuous fermenta- tions was designed to evaluate the cofermentation of glucose, xylose, and L-arabinose with the strain AX101. The pH range of study was 4.5, 5.0, and 5.5 at 30°C. The cofermentation process yield was about 84%, which is about the same as that of plasmid-bearing strain 206C(pZB301). Although cofer- mentation of all three sugars was achieved, there was a preferential order of sugar utilization: glucose first, then xylose, and arabinose last. -
Screening of Levan Producing Bacteria from Soil Collected from Jaggery Field Nb
IJPCBS 2017, 7(3), 202-210 Laddha et al. ISSN: 2249-9504 INTERNATIONAL JOURNAL OF PHARMACEUTICAL, CHEMICAL AND BIOLOGICAL SCIENCES Available online at www.ijpcbs.com Research Article SCREENING OF LEVAN PRODUCING BACTERIA FROM SOIL COLLECTED FROM JAGGERY FIELD NB. Laddha1* and MP. Chitanand2 1Research Centre in Microbiology, Netaji Subhashchandra Bose College, Nanded-431 602, Maharashtra, India. 2Department of Microbiology, Netaji Subhashchandra Bose College, Nanded- 431 602, Maharashtra, India. ABSTRACT Levan is an extracellular polysaccharide composed predominantly of D-fructose residues joined by glycosidic bonds. At present, there are many polysaccharides in the market primarily of plant origin. But microbial levans are more preferred as dietary polysaccharide due to its mult- idimensional application as anti-lipidemic, anti-cholesterimic, anti-cancerous and as prebiotic. In this context, in present study twelve levan producing isolates were screened out from jaggery field. Iosolate SJ8 was the highest levan producer which was studied for cultural, morphological and biochemical characterization. It was identified as Bacillus subtilis (KC243314). The optimized fermentation conditions for levan production were pH 7, temperature 300 C,100rpm and 48hrs fermentation period. At these optimized conditions the maximum levan production was 30.6mg/ml. Sugar composition of the polymer was confirmed by analytical methods and TLC. Result proved the presence of fructose as the main sugar in the polymer. Keywords : Levan, Bacillus subtilis (KC243314), polymer, fructose. INTRODUCTION plasma substitute, drug activity prolonger5, anti- Levan is a biopolymer formed by β-(2,6) linkage obesity and lipid-lowering agent6, having β-(1,2) linkages on its branch points and osmoregulator, cryoprotector, or antitumor contains long chain of fructose units in its agent7. -
Cheminformatics for Genome-Scale Metabolic Reconstructions
CHEMINFORMATICS FOR GENOME-SCALE METABOLIC RECONSTRUCTIONS John W. May European Molecular Biology Laboratory European Bioinformatics Institute University of Cambridge Homerton College A thesis submitted for the degree of Doctor of Philosophy June 2014 Declaration This thesis is the result of my own work and includes nothing which is the outcome of work done in collaboration except where specifically indicated in the text. This dissertation is not substantially the same as any I have submitted for a degree, diploma or other qualification at any other university, and no part has already been, or is currently being submitted for any degree, diploma or other qualification. This dissertation does not exceed the specified length limit of 60,000 words as defined by the Biology Degree Committee. This dissertation has been typeset using LATEX in 11 pt Palatino, one and half spaced, according to the specifications defined by the Board of Graduate Studies and the Biology Degree Committee. June 2014 John W. May to Róisín Acknowledgements This work was carried out in the Cheminformatics and Metabolism Group at the European Bioinformatics Institute (EMBL-EBI). The project was fund- ed by Unilever, the Biotechnology and Biological Sciences Research Coun- cil [BB/I532153/1], and the European Molecular Biology Laboratory. I would like to thank my supervisor, Christoph Steinbeck for his guidance and providing intellectual freedom. I am also thankful to each member of my thesis advisory committee: Gordon James, Julio Saez-Rodriguez, Kiran Patil, and Gos Micklem who gave their time, advice, and guidance. I am thankful to all members of the Cheminformatics and Metabolism Group.