Relation of Exposure to Amino Acids Involved in Sarcosine Metabolic Pathway on Behavior of Non-Tumor and Malignant Prostatic Cell Lines
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Sarcosine and Other Metabolites Along the Choline Oxidation Pathway in Relation to Prostate Cancer—A Large Nested Case–Control Study Within the JANUS Cohort in Norway
IJC International Journal of Cancer Sarcosine and other metabolites along the choline oxidation pathway in relation to prostate cancer—A large nested case–control study within the JANUS cohort in Norway Stefan de Vogel1, Arve Ulvik2, Klaus Meyer2, Per Magne Ueland3,4, Ottar Nyga˚rd5,6, Stein Emil Vollset1,7, Grethe S. Tell1, Jesse F. Gregory III8, Steinar Tretli9 and Tone Bjïrge1,7 1 Department of Global Public Health and Primary Care, University of Bergen, Bergen, Norway 2 BEVITAL AS, Bergen, Norway 3 Section for Pharmacology, Institute of Medicine, University of Bergen, Bergen, Norway 4 Laboratory of Clinical Biochemistry, Haukeland University Hospital, Bergen, Norway 5 Section for Cardiology, Institute of Medicine, University of Bergen, Bergen, Norway 6 Department of Heart Disease, Haukeland University Hospital, Bergen, Norway 7 Norwegian Institute of Public Health, Bergen, Norway 8 Food Science and Human Nutrition Department, University of Florida, Gainesville, FL 9 The Cancer Registry of Norway, Oslo, Norway Methyl group donors and intermediates of one-carbon metabolism affect DNA synthesis and DNA methylation, and may thereby affect prostate carcinogenesis. Choline, the precursor of betaine, and the one-carbon metabolite sarcosine have been associated with increased prostate cancer risk. Within JANUS, a prospective cohort in Norway (n 5 317,000) with baseline serum samples, we conducted a nested case–control study among 3,000 prostate cancer cases and 3,000 controls. Using conditional logistic regression, odds ratios (ORs) and 95% confidence intervals (CIs) for prostate cancer risk were estimated according to quintiles of circulating betaine, dimethylglycine (DMG), sarcosine, glycine and serine. High sarcosine and glycine concentrations were associated with reduced prostate cancer risk of borderline significance (sarcosine: highest vs. -
Proton NMR Spectroscopic Analysis of Multiple Acyl-Coa Dehydrogenase Deficiencyðcapacity of the Choline Oxidation Pathway for Methylation in Vivo
Biochimica et Biophysica Acta 1406Ž. 1998 274±282 View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Proton NMR spectroscopic analysis of multiple acyl-CoA dehydrogenase deficiencyÐcapacity of the choline oxidation pathway for methylation in vivo Shamus P. Burns a, Heather C. Holmes a, Ronald A. Chalmers c, Andrew Johnson b, Richard A. Iles a,) a Medical Unit, Cellular and Molecular Mechanisms Research Group, St. Bartholomew's and The Royal London School of Medicine and Dentistry, Whitechapel, London E1 1BB, UK b Biochemistry Unit, Institute of Child Health, London WC1N 1EH, UK c Paediatric Metabolism Unit, Department of Child Health, St. George's Hospital Medical School, London SW17 ORE, UK Received 20 January 1998; accepted 16 February 1998 Abstract Proton NMR spectra of urine from subjects with multiple acyl-CoA dehydrogenase deficiency, caused by defects in either the electron transport flavoprotein or electron transport flavoprotein ubiquinone oxidoreductase, provide a characteris- tic and possibly diagnostic metabolite profile. The detection of dimethylglycine and sarcosine, intermediates in the oxidative degradation of choline, should discriminate between multiple acyl-CoA dehydrogenase deficiency and related disorders involving fatty acid oxidation. The excretion rates of betaine, dimethylglycineŽ. and sarcosine in these subjects give an estimate of the minimum rates of both choline oxidation and methyl group release from betaine and reveal that the latter is comparable with the calculated total body methyl requirement in the human infant even when choline intake is very low. Our results provide a new insight into the rates of in vivo methylation in early human development. -
Phylogeny and Evolution of Aldehyde Dehydrogenase-Homologous Folate Enzymes
Chemico-Biological Interactions 191 (2011) 122–128 Contents lists available at ScienceDirect Chemico-Biological Interactions journal homepage: www.elsevier.com/locate/chembioint Phylogeny and evolution of aldehyde dehydrogenase-homologous folate enzymes Kyle C. Strickland a, Roger S. Holmes b, Natalia V. Oleinik a, Natalia I. Krupenko a, Sergey A. Krupenko a,∗ a Department of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, SC 29425 USA b School of Biomolecular and Physical Sciences, Griffith University, Nathan 4111 Brisbane, Queensland, Australia article info abstract Article history: Folate coenzymes function as one-carbon group carriers in intracellular metabolic pathways. Folate- Available online 6 January 2011 dependent reactions are compartmentalized within the cell and are catalyzed by two distinct groups of enzymes, cytosolic and mitochondrial. Some folate enzymes are present in both compartments Keywords: and are likely the products of gene duplications. A well-characterized cytosolic folate enzyme, FDH Folate metabolism (10-formyltetrahydro-folate dehydrogenase, ALDH1L1), contains a domain with significant sequence Mitochondria similarity to aldehyde dehydrogenases. This domain enables FDH to catalyze the NADP+-dependent 10-Formyltetrahydrofolate dehydrogenase conversion of short-chain aldehydes to corresponding acids in vitro. The aldehyde dehydrogenase-like Aldehyde dehydrogenase Domain structure reaction is the final step in the overall FDH mechanism, by which a tetrahydrofolate-bound formyl group + Evolution is oxidized to CO2 in an NADP -dependent fashion. We have recently cloned and characterized another folate enzyme containing an ALDH domain, a mitochondrial FDH. Here the biological roles of the two enzymes, a comparison of the respective genes, and some potential evolutionary implications are dis- cussed. -
The Effect of Tetrahydrofolate on the Reduction of Electron Transfer Flavoprotein by Sarcosine and Dimethylglycine Dehydrogenases
Biochem. J. (1982) 203, 707-715 707 Printed in Great Britain The effect of tetrahydrofolate on the reduction of electron transfer flavoprotein by sarcosine and dimethylglycine dehydrogenases Daniel J. STEENKAMP and Mazhar HUSAIN Molecular Biology Division, Veterans Administration Medical Centre, San Francisco, CA 94121 and Department ofBiochemistry and Biophysics, University ofCalifornia, San Francisce, CA 94143, U.S.A. (Received 7 December 1981/Accepted 23 February 1982) Pig liver electron transfer flavoprotein (ETF) is rapidly reduced by sarcosine and dimethylglycine dehydrogenases to the anionic semiquinone form, the subsequent formation of the flavoquinol form being a much slower process. In the presence of tetrahydrofolate the yield of anionic semiquinone at the end of the rapid phase of reduction of ETF is only about 10% less than without tetrahydrofolate, as judged by e.p.r. spectroscopy. Tetrahydrofolate does not alter the rate of reduction of ETF by either sarcosine or dimethylglycine dehydrogenase. Nevertheless, it was clearly demon- strated that tetrahydrofolate is a substrate for both sarcosine and dimethylglycine dehydrogenases and is converted to N',10-methylenetetrahydrofolate. Sarcosine and dimethylglycine dehydrogenases creased incorporation of radioactivity from the (EC 1.5.99.1 and 1.5.99.2) are flavoproteins which N-methyl group of sarcosine into serine, sarcosine catalyse the oxidative N-demethylation of sarcosine oxidase activity was unaffected (Dac & Wriston, and dimethylglycine (MacKenzie & Abeles, 1956; 1958), -
Studies of TRIMETHYLGLYCINE OR BETAINE
Studies of TRIMETHYLGLYCINE OR BETAINE GENERAL DESCRIPTION Trimethylglycine or Betaine ( Betaine is also called Betaine but we do not use this name because we can confuse it with Betaine Chloride; this is a strong acidifier that is taken only at mealtimes, and may cause gastric irritation ), extracted from sugar beets, is obtained from pure molasses, and separated by chromatography; it is a powerful methylating agent and plays a particularly important role in the process of detoxification of homocysteine ( a powerful oxidant and free radical generator ), which, as known, is one of the major cause of heart and vascular diseases. Recent American studies have shown the value and effectiveness of T. as a dietary supplement that can give the following benefits: - Adjuvant in cardiovascular disease - Adjuvant in sporting competitions - Adjuvant in liver diseases - Adjuvant in baldness - Adjuvant in depression - Adjuvant in hepatitis - Adjuvant in alcohol-induced hepatitis fatty liver - Adjuvant in chronic general fatigue - Increasing S-adenosyl-methionine levels - Conflicting arteriosclerosis - Decreasing apopletic stroke risk - Decreasing fat tissue amount - Improving glucose metabolism - Improving dry mouth - Improving homocisteinuria which does not respond to pyridoxine improving use of oxygen - Improving oxygen utilization - Reducing triglycerides levels in liver - Reducing Cholesterol - Reducing liver lipidosis - Useful for immune deficiency deficit (immunomodulating) - Useful for hyperhomocysteinemia STRUCTURE AND PROPERTIES From a structural standpoint, T. differs from dimethylglycine in presence of a third methyl group (CH3). T. operates very successfully in methylation or trans-methylation process, which is the process by which methyl groups (CH3) are transferred from one molecule to another; it is a biochemical process essential to life, health and regeneration of body cells. -
Identification of Folate Binding Protein of Mitochondria As Dimethylglycine Dehydrogenase (Flavoprotein/Sarcosine Dehydrogenase/Tetrahydrofolate) ARTHUR J
Proc. Natl. Acad. Sci. USA Vol. 77, No. 8, pp. 4484-4488, August 1980 Biochemistry Identification of folate binding protein of mitochondria as dimethylglycine dehydrogenase (flavoprotein/sarcosine dehydrogenase/tetrahydrofolate) ARTHUR J. WITTWER* AND CONRAD WAGNERt Department of Biochemistry, Vanderbilt University and Veterans Administration Medical Center, Nashville, Tennessee 37203 Communicated by Sidney P. Colowick, April 24,1980 ABSTRACT The folate-binding protein of rat liver mito- Preparation of Tetrahydro[3H]folic Acid (H4[3HJPteGIu). chondria [Zamierowski, M. & Wagner, C. (1977) J. BioL Chem. [3',5',7,9-3H]PteGlu, potassium salt (20 Ci/mmol; 1 Ci = 3.7 252,933-9381 has been purified to homogeneity by a combina- tion of gel filtration, DEAE-cellulose, and affinity chromatog- X 101' becquerels) was obtained from Amersham. Unlabeled raphy. This protein was assayed by its ability to bind tetrahv- PteGlu (Sigma) was added to adjust the specific activity to 20 dro[3H folic acid in vitro. The purified protein contains tightly ,uCi/Amol. H4[3',5',7,9-3H]PteGlu was synthesized by chemical bound flavin and has a molecular weight of about 90,000 as reduction with NaBH4 (2). To 0.70 ml of 0.066 M Tris-HCI at determined by sodium dodecyl sulfate electrophoresis. This pH 7.8 was added 0.30 ml of a solution containing 0.40 protein also displays dimethylglycine deh drogenase [NN- ,gmol dimethylglycine: (acceptor) oxidoreductase (deme ylating), EC (8 ,Ci) of [3H]PteGlu. This solution was stirred in the dark 1.5.99.21 activity which copurifies with the folatebinding ac- under nitrogen at room temperature, and 0.25 ml of NaBH4 tivity. -
O O2 Enzymes Available from Sigma Enzymes Available from Sigma
COO 2.7.1.15 Ribokinase OXIDOREDUCTASES CONH2 COO 2.7.1.16 Ribulokinase 1.1.1.1 Alcohol dehydrogenase BLOOD GROUP + O O + O O 1.1.1.3 Homoserine dehydrogenase HYALURONIC ACID DERMATAN ALGINATES O-ANTIGENS STARCH GLYCOGEN CH COO N COO 2.7.1.17 Xylulokinase P GLYCOPROTEINS SUBSTANCES 2 OH N + COO 1.1.1.8 Glycerol-3-phosphate dehydrogenase Ribose -O - P - O - P - O- Adenosine(P) Ribose - O - P - O - P - O -Adenosine NICOTINATE 2.7.1.19 Phosphoribulokinase GANGLIOSIDES PEPTIDO- CH OH CH OH N 1 + COO 1.1.1.9 D-Xylulose reductase 2 2 NH .2.1 2.7.1.24 Dephospho-CoA kinase O CHITIN CHONDROITIN PECTIN INULIN CELLULOSE O O NH O O O O Ribose- P 2.4 N N RP 1.1.1.10 l-Xylulose reductase MUCINS GLYCAN 6.3.5.1 2.7.7.18 2.7.1.25 Adenylylsulfate kinase CH2OH HO Indoleacetate Indoxyl + 1.1.1.14 l-Iditol dehydrogenase L O O O Desamino-NAD Nicotinate- Quinolinate- A 2.7.1.28 Triokinase O O 1.1.1.132 HO (Auxin) NAD(P) 6.3.1.5 2.4.2.19 1.1.1.19 Glucuronate reductase CHOH - 2.4.1.68 CH3 OH OH OH nucleotide 2.7.1.30 Glycerol kinase Y - COO nucleotide 2.7.1.31 Glycerate kinase 1.1.1.21 Aldehyde reductase AcNH CHOH COO 6.3.2.7-10 2.4.1.69 O 1.2.3.7 2.4.2.19 R OPPT OH OH + 1.1.1.22 UDPglucose dehydrogenase 2.4.99.7 HO O OPPU HO 2.7.1.32 Choline kinase S CH2OH 6.3.2.13 OH OPPU CH HO CH2CH(NH3)COO HO CH CH NH HO CH2CH2NHCOCH3 CH O CH CH NHCOCH COO 1.1.1.23 Histidinol dehydrogenase OPC 2.4.1.17 3 2.4.1.29 CH CHO 2 2 2 3 2 2 3 O 2.7.1.33 Pantothenate kinase CH3CH NHAC OH OH OH LACTOSE 2 COO 1.1.1.25 Shikimate dehydrogenase A HO HO OPPG CH OH 2.7.1.34 Pantetheine kinase UDP- TDP-Rhamnose 2 NH NH NH NH N M 2.7.1.36 Mevalonate kinase 1.1.1.27 Lactate dehydrogenase HO COO- GDP- 2.4.1.21 O NH NH 4.1.1.28 2.3.1.5 2.1.1.4 1.1.1.29 Glycerate dehydrogenase C UDP-N-Ac-Muramate Iduronate OH 2.4.1.1 2.4.1.11 HO 5-Hydroxy- 5-Hydroxytryptamine N-Acetyl-serotonin N-Acetyl-5-O-methyl-serotonin Quinolinate 2.7.1.39 Homoserine kinase Mannuronate CH3 etc. -
SSIEM Classification of Inborn Errors of Metabolism 2011
SSIEM classification of Inborn Errors of Metabolism 2011 Disease group / disease ICD10 OMIM 1. Disorders of amino acid and peptide metabolism 1.1. Urea cycle disorders and inherited hyperammonaemias 1.1.1. Carbamoylphosphate synthetase I deficiency 237300 1.1.2. N-Acetylglutamate synthetase deficiency 237310 1.1.3. Ornithine transcarbamylase deficiency 311250 S Ornithine carbamoyltransferase deficiency 1.1.4. Citrullinaemia type1 215700 S Argininosuccinate synthetase deficiency 1.1.5. Argininosuccinic aciduria 207900 S Argininosuccinate lyase deficiency 1.1.6. Argininaemia 207800 S Arginase I deficiency 1.1.7. HHH syndrome 238970 S Hyperammonaemia-hyperornithinaemia-homocitrullinuria syndrome S Mitochondrial ornithine transporter (ORNT1) deficiency 1.1.8. Citrullinemia Type 2 603859 S Aspartate glutamate carrier deficiency ( SLC25A13) S Citrin deficiency 1.1.9. Hyperinsulinemic hypoglycemia and hyperammonemia caused by 138130 activating mutations in the GLUD1 gene 1.1.10. Other disorders of the urea cycle 238970 1.1.11. Unspecified hyperammonaemia 238970 1.2. Organic acidurias 1.2.1. Glutaric aciduria 1.2.1.1. Glutaric aciduria type I 231670 S Glutaryl-CoA dehydrogenase deficiency 1.2.1.2. Glutaric aciduria type III 231690 1.2.2. Propionic aciduria E711 232000 S Propionyl-CoA-Carboxylase deficiency 1.2.3. Methylmalonic aciduria E711 251000 1.2.3.1. Methylmalonyl-CoA mutase deficiency 1.2.3.2. Methylmalonyl-CoA epimerase deficiency 251120 1.2.3.3. Methylmalonic aciduria, unspecified 1.2.4. Isovaleric aciduria E711 243500 S Isovaleryl-CoA dehydrogenase deficiency 1.2.5. Methylcrotonylglycinuria E744 210200 S Methylcrotonyl-CoA carboxylase deficiency 1.2.6. Methylglutaconic aciduria E712 250950 1.2.6.1. Methylglutaconic aciduria type I E712 250950 S 3-Methylglutaconyl-CoA hydratase deficiency 1.2.6.2. -
Purification and Properties of Dimethylglycine Oxidase from Cylindrocarpon Didymum M-1
Agric. Biol. Chem., 44 (6), 1383•`1389, 1980 1383 Purification and Properties of Dimethylglycine Oxidase from Cylindrocarpon didymum M-1 Nobuhiro MORI,* Bunsei KAWAKAMI,Yoshiki TANI and Hideaki YAMADA Departmentof AgriculturalChemistry, Kyoto University,Kyoto 606, Japan ReceivedFebruary 5, 1980 Dimethylglycine oxidase was purified to homogeneity from the cell extract of Cylindro carpon didymum M-1, aerobically grown in medium containing betaine as the carbon source. The molecular weight of the enzyme was estimated to be 170,000 by the gel filtration method and 180,000 by the sedimentation velocity method. The enzyme exhibited an absorption spectrum characteristic of a flavoprotein with absorption maxima at 277, 345 and 450 run. The enzyme consisted of two identical subunits with a molecular weight of 82,000, and contained two mol of FAD per mol of enzyme. The flavin was shown to be covalently bound to the protein. The enzyme was inactivated by Ag+, Hg2+, Zn2+ and iodoacetate. The enzyme oxidized dimethylglycine but was inert toward choline, betaine, sarcosine and alkylamines. Km and Vmax values for dimethylglycine were 9.1mM and 1.22ƒÊmol/min/mg, respectively. The enzyme catalyzed the following reaction: Dimethylglycine+O2+H2O ?? sarcosine+form aldehyde+H2O2. It has been reported that dimethylglycine The present paper deals with the purifica and sarcosine were metabolized to sarcosine tion and some properties of dimethylglycine and glycine, respectively, by the oxidative oxidase from C. didymum M-1. demethylation reaction in liver mitochondria.1) Dimethylglycine dehydrogenase and sarco sine dehydrogenase have been partially purfied MATERIALS AND METHODS from liver mitochondria of rat2,3) and Rhesus Materials. -
Plasma Methylation Profile RESOURCE GUIDE
Plasma Methylation Profile RESOURCE GUIDE Science + Insight doctorsdata.com Methionine SAMe DNA SHMT THF RNA 5, 10 Methyltransferases MethyleneTHF Protein Thymidine DMG Lipids synthesis B12 BHMT SAH dUMP MTRR MTR TMG adenosine AHCY MTHFR Homocysteine 5 Methyl THF CBS Cystathionine Cysteine Sulte SUOX Sulfate Introduction The Plasma Methylation Profile is a functional assessment of the enzymes involved in methionine metabolism and the trans-sulfuration pathway (commonly called the “Methylation Pathway”). The genomics revolution has made it possible to assess genetic information stored in the DNA code. An awareness of single nucleotide polymorphisms (SNPs) has made genetic testing for certain SNPs part of diagnostic patient assessment. While the identification of SNPs in a patient’s genome is important, it is vital to remember that functional testing of enzymes should determine treatment decisions. There are many layers of translation between the genome and the enzyme. Enzyme function may be compromised not only by inheritance, but also by acquired epigenetic factors such as nutritional status, oxidative stress, autoimmunity or environmental exposures. There is mounting evidence that, especially within the folate and methylation pathways, multiple SNPs in multiple genes (haplotypes) may be necessary to alter metabolism or change health outcomes. Gastrointestinal functions may influence absorption, physiology, metabolism and immunity; nutrient maldigestion or malabsorption may inhibit normal enzyme functions, and may have greater effects on enzymes with SNPs. © 2016 Doctor’s Data, Inc. All rights reserved. doctorsdata.com Doctor’s Data, Inc. Plasma Methylation Enzyme and Nutrition Guide 2 Methionine High Methionine may be elevated for a variety of reasons. Several enzymes involved in the metabolism of methionine require magnesium and other nutritional cofactors. -
(DMG), Human Maternally Expressed Gene 3 (MEG3), and Apelin-12 in Patients with Acute Myocardial Infarction and Their Clinical Significance
2183 Original Article The expression levels of plasma dimethylglycine (DMG), human maternally expressed gene 3 (MEG3), and Apelin-12 in patients with acute myocardial infarction and their clinical significance Yingna Wei, Bei Wang Department of Cardiology, Sanya Central Hospital, Hainan, Sanya, China Contributions: (I) Conception and design: All authors; (II) Administrative support: All authors; (III) Provision of study materials or patients: All authors; (IV) Collection and assembly of data: All authors; (V) Data analysis and interpretation: All authors; (VI) Manuscript writing: All authors; (VII) Final approval of manuscript: All authors. Correspondence to: Yingna Wei. Department of Cardiology, Sanya Central Hospital, No.1154, Jiefangsi Road, Sanya 572000, China. Email: [email protected]; [email protected]. Background: To analyze the expression levels of plasma dimethylglycine (DMG), human maternally expressed gene 3 (MEG3), and Apelin-12 in patients with acute myocardial infarction (AMI) and explore their clinical significance. Methods: One hundred and ten patients with suspected AMI (chest pain duration <6 h) who were admitted to our hospital between December 2018 and June 2020 were included. Plasma DMG, MEG3, and Apelin-12 levels were measured at the time of admission. The levels of plasma DMG, MEG3, and Apelin-12, as well as the general data and admission baseline data of these patients were then compared with those of non-AMI patients. The receiver operating characteristic (ROC) curve was used to analyze the clinical value of plasma DMG, MEG3, and Apelin-12 levels for the early diagnosis of AMI. Results: Among the 110 patients with chest pain suspected of AMI, 34 were clinically diagnosed with AMI, and 76 were non-AMI patients. -
Folate Network Genetic Variation, Plasma Homocysteine, and Global
Chromosome LINE-1 elements elements LINE-1 Global genomic DNA methylation – methylation DNA genomic Global Alu elements Chromosome Global genomic DNA methylation – methylation DNA genomic Global Chromosome Plasma total homocysteine homocysteine total Plasma 10 P value value P log - Folate network genetic variation, plasma homocysteine, and global genomic methylation content: a genetic association study Wernimont et al. Wernimont et al. BMC Medical Genetics 2011, 12:150 http://www.biomedcentral.com/1471-2350/12/150 (21 November 2011) Wernimont et al. BMC Medical Genetics 2011, 12:150 http://www.biomedcentral.com/1471-2350/12/150 RESEARCHARTICLE Open Access Folate network genetic variation, plasma homocysteine, and global genomic methylation content: a genetic association study Susan M Wernimont1, Andrew G Clark2, Patrick J Stover1, Martin T Wells3, Augusto A Litonjua4, Scott T Weiss4, J Michael Gaziano5, Katherine L Tucker6, Andrea Baccarelli7,8, Joel Schwartz7, Valentina Bollati8 and Patricia A Cassano9* Abstract Background: Sequence variants in genes functioning in folate-mediated one-carbon metabolism are hypothesized to lead to changes in levels of homocysteine and DNA methylation, which, in turn, are associated with risk of cardiovascular disease. Methods: 330 SNPs in 52 genes were studied in relation to plasma homocysteine and global genomic DNA methylation. SNPs were selected based on functional effects and gene coverage, and assays were completed on the Illumina Goldengate platform. Age-, smoking-, and nutrient-adjusted genotype–phenotype associations were estimated in regression models. Results: Using a nominal P ≤ 0.005 threshold for statistical significance, 20 SNPs were associated with plasma homocysteine, 8 with Alu methylation, and 1 with LINE-1 methylation.