Effect of Glycogen Synthase Kinase-3 Inactivation on Mouse Mammary Gland Development and Oncogenesis
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A Cell Line P53 Mutation Type UM
A Cell line p53 mutation Type UM-SCC 1 wt UM-SCC5 Exon 5, 157 GTC --> TTC Missense mutation by transversion (Valine --> Phenylalanine UM-SCC6 wt UM-SCC9 wt UM-SCC11A wt UM-SCC11B Exon 7, 242 TGC --> TCC Missense mutation by transversion (Cysteine --> Serine) UM-SCC22A Exon 6, 220 TAT --> TGT Missense mutation by transition (Tyrosine --> Cysteine) UM-SCC22B Exon 6, 220 TAT --> TGT Missense mutation by transition (Tyrosine --> Cysteine) UM-SCC38 Exon 5, 132 AAG --> AAT Missense mutation by transversion (Lysine --> Asparagine) UM-SCC46 Exon 8, 278 CCT --> CGT Missense mutation by transversion (Proline --> Alanine) B 1 Supplementary Methods Cell Lines and Cell Culture A panel of ten established HNSCC cell lines from the University of Michigan series (UM-SCC) was obtained from Dr. T. E. Carey at the University of Michigan, Ann Arbor, MI. The UM-SCC cell lines were derived from eight patients with SCC of the upper aerodigestive tract (supplemental Table 1). Patient age at tumor diagnosis ranged from 37 to 72 years. The cell lines selected were obtained from patients with stage I-IV tumors, distributed among oral, pharyngeal and laryngeal sites. All the patients had aggressive disease, with early recurrence and death within two years of therapy. Cell lines established from single isolates of a patient specimen are designated by a numeric designation, and where isolates from two time points or anatomical sites were obtained, the designation includes an alphabetical suffix (i.e., "A" or "B"). The cell lines were maintained in Eagle's minimal essential media supplemented with 10% fetal bovine serum and penicillin/streptomycin. -
Analysis of Mouse Keratin 6A Regulatory Sequences in Transgenic Mice Reveals Constitutive, Tissue-Speci®C Expression by a Keratin 6A Minigene
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Analysis of Mouse Keratin 6a Regulatory Sequences in Transgenic Mice Reveals Constitutive, Tissue-Speci®c Expression by a Keratin 6a Minigene Donna Mahony, Seetha Karunaratne, Graham Cam,* and Joseph A. Rothnagel Department of Biochemistry and the Institute for Molecular Bioscience, University of Queensland, Brisbane, Queensland, and *Division of Animal Production, CSIRO, Blacktown, New South Wales, Australia The analysis of keratin 6 expression is complicated atin 6 expressing tissues, including the hair follicle, by the presence of multiple isoforms that are tongue, footpad, and nail bed, showing that both expressed constitutively in a number of internal stra- transgenes retained keratinocyte-speci®c expression. ti®ed epithelia, in palmoplantar epidermis, and in Quantitative analysis of b-galactosidase activity veri- the companion cell layer of the hair follicle. In addi- ®ed that both the 1.3 and 0.12 kb keratin 6a promo- tion, keratin 6 expression is inducible in interfollicu- ter constructs produced similar levels of the reporter. lar epidermis and the outer root sheath of the Notably, bothconstructs were constitutively follicle, in response to wounding stimuli, phorbol expressed in the outer root sheath and interfollicular esters, or retinoic acid. In order to establishthecriti- epidermis in the absence of any activating stimulus, cal regions involved in the regulation of keratin 6a suggesting that they lack the regulatory elements (the dominant isoform in mice), we generated trans- that normally silence transcription in these cells. This genic mice withtwo different-sized mouse keratin 6a study has revealed that a keratin 6a minigene con- constructs containing either 1.3 kb or 0.12 kb of 5¢ tains critical cis elements that mediate tissue-speci®c ¯anking sequence linked to the lacZ reporter gene. -
Structural and Biochemical Changes Underlying a Keratoderma-Like Phenotype in Mice Lacking Suprabasal AP1 Transcription Factor Function
Citation: Cell Death and Disease (2015) 6, e1647; doi:10.1038/cddis.2015.21 OPEN & 2015 Macmillan Publishers Limited All rights reserved 2041-4889/15 www.nature.com/cddis Structural and biochemical changes underlying a keratoderma-like phenotype in mice lacking suprabasal AP1 transcription factor function EA Rorke*,1, G Adhikary2, CA Young2, RH Rice3, PM Elias4, D Crumrine4, J Meyer4, M Blumenberg5 and RL Eckert2,6,7,8 Epidermal keratinocyte differentiation on the body surface is a carefully choreographed process that leads to assembly of a barrier that is essential for life. Perturbation of keratinocyte differentiation leads to disease. Activator protein 1 (AP1) transcription factors are key controllers of this process. We have shown that inhibiting AP1 transcription factor activity in the suprabasal murine epidermis, by expression of dominant-negative c-jun (TAM67), produces a phenotype type that resembles human keratoderma. However, little is understood regarding the structural and molecular changes that drive this phenotype. In the present study we show that TAM67-positive epidermis displays altered cornified envelope, filaggrin-type keratohyalin granule, keratin filament, desmosome formation and lamellar body secretion leading to reduced barrier integrity. To understand the molecular changes underlying this process, we performed proteomic and RNA array analysis. Proteomic study of the corneocyte cross-linked proteome reveals a reduction in incorporation of cutaneous keratins, filaggrin, filaggrin2, late cornified envelope precursor proteins, hair keratins and hair keratin-associated proteins. This is coupled with increased incorporation of desmosome linker, small proline-rich, S100, transglutaminase and inflammation-associated proteins. Incorporation of most cutaneous keratins (Krt1, Krt5 and Krt10) is reduced, but incorporation of hyperproliferation-associated epidermal keratins (Krt6a, Krt6b and Krt16) is increased. -
Proteomic Expression Profile in Human Temporomandibular Joint
diagnostics Article Proteomic Expression Profile in Human Temporomandibular Joint Dysfunction Andrea Duarte Doetzer 1,*, Roberto Hirochi Herai 1 , Marília Afonso Rabelo Buzalaf 2 and Paula Cristina Trevilatto 1 1 Graduate Program in Health Sciences, School of Medicine, Pontifícia Universidade Católica do Paraná (PUCPR), Curitiba 80215-901, Brazil; [email protected] (R.H.H.); [email protected] (P.C.T.) 2 Department of Biological Sciences, Bauru School of Dentistry, University of São Paulo, Bauru 17012-901, Brazil; [email protected] * Correspondence: [email protected]; Tel.: +55-41-991-864-747 Abstract: Temporomandibular joint dysfunction (TMD) is a multifactorial condition that impairs human’s health and quality of life. Its etiology is still a challenge due to its complex development and the great number of different conditions it comprises. One of the most common forms of TMD is anterior disc displacement without reduction (DDWoR) and other TMDs with distinct origins are condylar hyperplasia (CH) and mandibular dislocation (MD). Thus, the aim of this study is to identify the protein expression profile of synovial fluid and the temporomandibular joint disc of patients diagnosed with DDWoR, CH and MD. Synovial fluid and a fraction of the temporomandibular joint disc were collected from nine patients diagnosed with DDWoR (n = 3), CH (n = 4) and MD (n = 2). Samples were subjected to label-free nLC-MS/MS for proteomic data extraction, and then bioinformatics analysis were conducted for protein identification and functional annotation. The three Citation: Doetzer, A.D.; Herai, R.H.; TMD conditions showed different protein expression profiles, and novel proteins were identified Buzalaf, M.A.R.; Trevilatto, P.C. -
1 No. Affymetrix ID Gene Symbol Genedescription Gotermsbp Q Value 1. 209351 at KRT14 Keratin 14 Structural Constituent of Cyto
1 Affymetrix Gene Q No. GeneDescription GOTermsBP ID Symbol value structural constituent of cytoskeleton, intermediate 1. 209351_at KRT14 keratin 14 filament, epidermis development <0.01 biological process unknown, S100 calcium binding calcium ion binding, cellular 2. 204268_at S100A2 protein A2 component unknown <0.01 regulation of progression through cell cycle, extracellular space, cytoplasm, cell proliferation, protein kinase C inhibitor activity, protein domain specific 3. 33323_r_at SFN stratifin/14-3-3σ binding <0.01 regulation of progression through cell cycle, extracellular space, cytoplasm, cell proliferation, protein kinase C inhibitor activity, protein domain specific 4. 33322_i_at SFN stratifin/14-3-3σ binding <0.01 structural constituent of cytoskeleton, intermediate 5. 201820_at KRT5 keratin 5 filament, epidermis development <0.01 structural constituent of cytoskeleton, intermediate 6. 209125_at KRT6A keratin 6A filament, ectoderm development <0.01 regulation of progression through cell cycle, extracellular space, cytoplasm, cell proliferation, protein kinase C inhibitor activity, protein domain specific 7. 209260_at SFN stratifin/14-3-3σ binding <0.01 structural constituent of cytoskeleton, intermediate 8. 213680_at KRT6B keratin 6B filament, ectoderm development <0.01 receptor activity, cytosol, integral to plasma membrane, cell surface receptor linked signal transduction, sensory perception, tumor-associated calcium visual perception, cell 9. 202286_s_at TACSTD2 signal transducer 2 proliferation, membrane <0.01 structural constituent of cytoskeleton, cytoskeleton, intermediate filament, cell-cell adherens junction, epidermis 10. 200606_at DSP desmoplakin development <0.01 lectin, galactoside- sugar binding, extracellular binding, soluble, 7 space, nucleus, apoptosis, 11. 206400_at LGALS7 (galectin 7) heterophilic cell adhesion <0.01 2 S100 calcium binding calcium ion binding, epidermis 12. 205916_at S100A7 protein A7 (psoriasin 1) development <0.01 S100 calcium binding protein A8 (calgranulin calcium ion binding, extracellular 13. -
Phosphoproteomic Characterization of Glycogen Synthase Kinase-3
University of Pennsylvania ScholarlyCommons Publicly Accessible Penn Dissertations 2016 Phosphoproteomic Characterization Of Glycogen Synthase Kinase-3 Mansi Shinde University of Pennsylvania, [email protected] Follow this and additional works at: https://repository.upenn.edu/edissertations Part of the Cell Biology Commons, Developmental Biology Commons, and the Pharmacology Commons Recommended Citation Shinde, Mansi, "Phosphoproteomic Characterization Of Glycogen Synthase Kinase-3" (2016). Publicly Accessible Penn Dissertations. 2583. https://repository.upenn.edu/edissertations/2583 This paper is posted at ScholarlyCommons. https://repository.upenn.edu/edissertations/2583 For more information, please contact [email protected]. Phosphoproteomic Characterization Of Glycogen Synthase Kinase-3 Abstract Glycogen Synthase Kinase-3 (GSK-3) is a constitutively active, ubiquitously expressed kinase that acts as a critical regulator of many signaling pathways. These pathways, when dysregulated, have been implicated in many human diseases, including bipolar disorder (BD), cancer, and diabetes. Over 100 putative GSK-3 substrates have been reported, based on direct kinase assays or genetic and pharmacological manipulation of GSK-3, in diverse cell types. Many more have been predicted based upon on the prevalence of the GSK-3 consensus sequence. As a result, there remains an unclear picture of the complete GSK-3 phosphoproteome. We have therefore used a large-scale mass spectrometry approach to analyze global changes in phosphorylation and describe the repertoire of GSK-3 substrates in a single cell type. For our studies, we used stable isotope labeling of amino acids in culture (SILAC) to compare the phosphoproteome of wild-type mouse embryonic stem cells (ESCs) to ESCs completely lacking Gsk3a and Gsk3b expression (Gsk3 DKO). -
Gsk3β Mediates Muscle Pathology in Myotonic Dystrophy
GSK3β mediates muscle pathology in myotonic dystrophy Karlie Jones, … , Nikolai A. Timchenko, Lubov T. Timchenko J Clin Invest. 2012;122(12):4461-4472. https://doi.org/10.1172/JCI64081. Research Article Muscle biology Myotonic dystrophy type 1 (DM1) is a complex neuromuscular disease characterized by skeletal muscle wasting, weakness, and myotonia. DM1 is caused by the accumulation of CUG repeats, which alter the biological activities of RNA-binding proteins, including CUG-binding protein 1 (CUGBP1). CUGBP1 is an important skeletal muscle translational regulator that is activated by cyclin D3–dependent kinase 4 (CDK4). Here we show that mutant CUG repeats suppress Cdk4 signaling by increasing the stability and activity of glycogen synthase kinase 3β (GSK3β). Using a mouse model of DM1 (HSALR), we found that CUG repeats in the 3′ untranslated region (UTR) of human skeletal actin increase active GSK3β in skeletal muscle of mice, prior to the development of skeletal muscle weakness. Inhibition of GSK3β in both DM1 cell culture and mouse models corrected cyclin D3 levels and reduced muscle weakness and myotonia in DM1 mice. Our data predict that compounds normalizing GSK3β activity might be beneficial for improvement of muscle function in patients with DM1. Find the latest version: https://jci.me/64081/pdf Research article GSK3β mediates muscle pathology in myotonic dystrophy Karlie Jones,1 Christina Wei,1 Polina Iakova,2 Enrico Bugiardini,3 Christiane Schneider-Gold,4 Giovanni Meola,3 James Woodgett,5 James Killian,6 Nikolai A. Timchenko,2 and Lubov T. Timchenko1 1Department of Molecular Physiology and Biophysics and 2Department of Pathology and Immunology and Huffington Center on Aging, Baylor College of Medicine, Houston, Texas, USA. -
Keratin 6A Gene Silencing Suppresses Cell Invasion and Metastasis of Nasopharyngeal Carcinoma Via the Β‑Catenin Cascade
MOLECULAR MEDICINE REPORTS 19: 3477-3484, 2019 Keratin 6A gene silencing suppresses cell invasion and metastasis of nasopharyngeal carcinoma via the β‑catenin cascade CHUANJUN CHEN1 and HUIGUO SHAN2 1Oncology Department, Xinchang People's Hospital, Shaoxing, Zhejiang 312500; 2Oncology Department, The Affiliated Dongtai Hospital of Nantong University, Dongtai, Jiangsu 224200, P.R. China Received June 4, 2018; Accepted March 1, 2019 DOI: 10.3892/mmr.2019.10055 Abstract. Nasopharyngeal carcinoma (NPC) is a type of head Introduction and neck cancer. This study aimed to study the mechanisms of ectopic keratin 6A (KRT6A) in NPC. Reverse transcrip- Nasopharyngeal carcinoma (NPC) is a type of head and neck tion-quantitative polymerase chain reaction (RT-qPCR) and cancer (1,2). The incidence of NPC is the highest near the parts western blotting were performed to detect KRT6A levels in of or in the ear, nose and throat malignancies. The incidence of NPC cell lines (C666-1, 5-8F and SUNE-1) and a nasopha- NPC has obvious regional clusters and certain ethnic groups ryngeal epithelial cell line (NP69, as a control). After SUNE-1 are likely to experience a higher incidence of NPC than NPC cells had been silenced by KRT6A, cell viability, metas- others. Incidence is low in most areas of the world, generally tasis and invasion were determined using Cell Counting Kit-8, below 1/105 (3). However, in China NPC is mainly distributed wound healing and Transwell assays, respectively. KRT6A in southern China and Southeast Asia (4). The onset ages of levels, metastasis-associated factors and the Wnt/β-catenin NPC are mostly between 40-60 years old, with males having a pathway were measured using RT-qPCR and western blot- higher incidence compared with their female counterparts (5). -
Review of the Faculty of Medicine
Review of the Faculty of Medicine University of Toronto 2010 Dr. Alastair Buchan, Professor of Stroke Medicine and Head of the Medical Sciences Division, University of Oxford; Dr. Richard Levin, Vice President Health Affairs and Dean of the Faculty of Medicine, McGill; Dr. Joseph B. Martin, Professor of Neurobiology and Dean Emeritus of the Harvard Medical School Introduction This review is written at the request of the Provost and follows the study of extensive materials provided by the Faculty and three days of meetings on site in Toronto (see Appendix A). The reviewers are very grateful to Meg Connell for all of her assistance in arranging an extensive schedule which included meetings with many members of the community representing the University, Departmental, Research Institute, Hospital Research Institutes and Hospital CEOs, and the Deanery Team. We are also very grateful to the Provost and her team, particularly Margie Halling. After agreement with the Provost, this report summarizes our major observations and does not respond specifically to the questions posed in the terms of reference. Executive Summary The reviewers were very impressed with the accomplishments of the University of Toronto, and in particular, the Faculty of Medicine and its Dean. The intention of the University of Toronto in going forward to its Bicentennial in 2030, is to be “a leader amongst the world’s best teaching and research universities in its discovery, preservation, and sharing of knowledge through its teaching and research and its commitment to excellence and equality”. Without a doubt the Faculty of Medicine, founded in 1843 and therefore 167 years old this year, is one of the preeminent Faculties of Medicine and as a total entity, one of North America’s and indeed the world’s largest and most prestigious Academic Health Science Centres. -
Cell Structure & Function
Cell Structure & Function Antibodies and Reagents BioLegend is ISO 13485:2016 Certified Toll-Free Tel: (US & Canada): 1.877.BIOLEGEND (246.5343) Tel: 858.768.5800 biolegend.com 02-0012-03 World-Class Quality | Superior Customer Support | Outstanding Value Table of Contents Introduction ....................................................................................................................................................................................3 Cell Biology Antibody Validation .............................................................................................................................................4 Cell Structure/ Organelles ..........................................................................................................................................................8 Cell Development and Differentiation ................................................................................................................................10 Growth Factors and Receptors ...............................................................................................................................................12 Cell Proliferation, Growth, and Viability...............................................................................................................................14 Cell Cycle ........................................................................................................................................................................................16 Cell Signaling ................................................................................................................................................................................18 -
Intermediate Filaments and Their Associated Proteins
93 Intermediate ®laments and their associated proteins: multiple dynamic personalities Megan K Houseweart∗ and Don W Cleveland² A fusion of mouse and human genetics has now proven that regulated by phosphorylation, the recent identi®cation of intermediate ®laments form a ¯exible scaffold essential for several kinases involved strengthens the argument that structuring cytoplasm in a variety of cell contexts. In some these dynamics are true in vivo events. The growing cases, the formation of this scaffold is achieved through a list of intermediate-®lament-associated proteins (IFAPs) newly identi®ed family of intermediate-®lament-associated surely expands the repertoire of possible interactions proteins that form cross-bridges between intermediate permitted to IFs and may also add another layer of ®laments and other cytoskeletal elements, including actin and regulatory complexity. Indeed, the discovery of several microtubules. human and mouse diseases caused by mutations in the IFAP proteins plectin and neuronal bullous pemphigoid antigen (BPAG1n) illustrates the importance of these Addresses molecules in providing links between components of the ∗Ludwig Institute for Cancer Research and Division of Cellular and Molecular Medicine, University of California at San Diego, 9500 cellular cytoskeleton. Most would agree that intermediate Gilman Drive, La Jolla, CA 92093, USA ®laments can no longer be thought of as the least dynamic ²Ludwig Institute for Cancer Research, Division of Cellular and components of the cell cytoskeleton. This review -
Table of Contents
Cyclical Review Fall 2012 Self-Study Department of Obstetrics & Gynaecology, University of Toronto Cyclical Review Self-Study Table of Contents 1. Executive Summary 1 2. Introduction and Context 3 2.1 Department Introduction 3 2.1.1. Appendix: Strategic Plan 2.2 Report of the Chair 9 3. People 11 3.1 Faculty Demographics 11 3.1.1 Primary Appointments 3.1.2 Cross Appointments 3.2 Residents 2012-2013 13 3.3 Fellows 2012-2013 14 3.3.1 Fellows by Alphabetical Order 14 3.3.2 Fellows by Program 15 4. Education 17 4.1 Undergraduate Education 17 4.1.1 Appendix: Details of Rotation at Each of the Teaching Sites 4.1.2 Appendix: Obstetrics and Gynaecology Clerkship – OBS310Y 4.1.3 Appendix: TRES Manual Logging Sheet 4.1.4 Appendix: Standardized Seminar Program 4.1.5 Appendix: Midrotation Feedback Form 4.1.6 Appendix: Clerkship Encounter Form 4.1.7 Appendix: OBS310Y Observed History and Physical Assessment Form 4.1.8 Appendix: Course Evaluation Data 4.2 Postgraduate Education – Residency Program 31 4.2.4.1 Appendix: Residency Program Committee (RPC) Terms of Reference 4.2.5.1 Appendix: Academic Half-Day Teaching 2012-13 4.3 Postgraduate Education – Fellowship Program 37 4.3.1 Description 37 4.3.2 Gynaecologic Oncology 41 4.3.3 Maternal-Fetal Medicine 43 4.3.4 Gynaecologic Reproductive Endocrinology and Infertility 45 4.4 Continuing Medical Education 47 4.4.1 CME Courses 4.4.2 Interhospital Rounds 4.5 Professional Development 49 4.5.1 Appendix: Faculty Development Workshops 4.5.2 Appendix: Leadership Council Presentations 5.