Annelida : Phyllodocida), with Reference to the Taxonomic Status of Aglaophamus Neotenus
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Preliminary Mass-Balance Food Web Model of the Eastern Chukchi Sea
NOAA Technical Memorandum NMFS-AFSC-262 Preliminary Mass-balance Food Web Model of the Eastern Chukchi Sea by G. A. Whitehouse U.S. DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration National Marine Fisheries Service Alaska Fisheries Science Center December 2013 NOAA Technical Memorandum NMFS The National Marine Fisheries Service's Alaska Fisheries Science Center uses the NOAA Technical Memorandum series to issue informal scientific and technical publications when complete formal review and editorial processing are not appropriate or feasible. Documents within this series reflect sound professional work and may be referenced in the formal scientific and technical literature. The NMFS-AFSC Technical Memorandum series of the Alaska Fisheries Science Center continues the NMFS-F/NWC series established in 1970 by the Northwest Fisheries Center. The NMFS-NWFSC series is currently used by the Northwest Fisheries Science Center. This document should be cited as follows: Whitehouse, G. A. 2013. A preliminary mass-balance food web model of the eastern Chukchi Sea. U.S. Dep. Commer., NOAA Tech. Memo. NMFS-AFSC-262, 162 p. Reference in this document to trade names does not imply endorsement by the National Marine Fisheries Service, NOAA. NOAA Technical Memorandum NMFS-AFSC-262 Preliminary Mass-balance Food Web Model of the Eastern Chukchi Sea by G. A. Whitehouse1,2 1Alaska Fisheries Science Center 7600 Sand Point Way N.E. Seattle WA 98115 2Joint Institute for the Study of the Atmosphere and Ocean University of Washington Box 354925 Seattle WA 98195 www.afsc.noaa.gov U.S. DEPARTMENT OF COMMERCE Penny. S. Pritzker, Secretary National Oceanic and Atmospheric Administration Kathryn D. -
The Genus <Emphasis Type="Italic">Nephtys </Emphasis
HELGOLANDER MEERESUNTERSUCHUNGEN Helgol~nder Meeresunters. 45, 65-96 (1991) The genus Nephtys (Polychaeta: Phyllodocida) of northern Europe: a review of species, including the description of N. pulchra sp. n. and a key to the Nephtu S. F. Rainer CSIRO Division of Fisheries, Marine Laboratories; PO Box 20, North Beach, W.A. 6020, Australia ABSTRACT: Twelve species of Nephtys now known from northern Europe are described, including one new species, N. pulchra sp. n. A key is provided to the 14 species of Nephtyidae from the region. Geographic changes in the setiger in which interramal cirri first occur are recognized in N. caeca (Fabricius), N. cfliata (Miiller), N. hombergfi Savigny and N. pente Rainer. INTRODUCTION Nephtyid polychaetes occur in most marine environments. The first nephtyid described was Nephtys ciliata (O.F. Mfiller, 1776); by 1843, the three common shallow- water and intertidal species in northern Europe had been described (Nephtys caeca [Fabricius, 1780], N. hombergii Savigny, 1818 and N. longosetosa C)rsted, 1843). Between 1865 und 1911, many nephtyid species were described from material collected from northern European waters, by Malmgren (1865), Ehlers (1868), Malta (1874), Hansen (1878), Th6el (1879), Michaelsen (1896), McIntosh (1900, 1908) and Heinen (1911). The studies by Michaelsen (1896) and Heinen (1911), and those by McIntosh (1908) and Fauvel (1914), placed many of these in synonymy with previously described species, and provided the basis for the present systematic status of European nephtyids. Descriptions of northern European nephtyids given by Fauchald (1963), Woolf (1968) and Hartmann- Schr6der (1971) are based on these studies. The descriptions of some species of Nephtys, especially N. -
OREGON ESTUARINE INVERTEBRATES an Illustrated Guide to the Common and Important Invertebrate Animals
OREGON ESTUARINE INVERTEBRATES An Illustrated Guide to the Common and Important Invertebrate Animals By Paul Rudy, Jr. Lynn Hay Rudy Oregon Institute of Marine Biology University of Oregon Charleston, Oregon 97420 Contract No. 79-111 Project Officer Jay F. Watson U.S. Fish and Wildlife Service 500 N.E. Multnomah Street Portland, Oregon 97232 Performed for National Coastal Ecosystems Team Office of Biological Services Fish and Wildlife Service U.S. Department of Interior Washington, D.C. 20240 Table of Contents Introduction CNIDARIA Hydrozoa Aequorea aequorea ................................................................ 6 Obelia longissima .................................................................. 8 Polyorchis penicillatus 10 Tubularia crocea ................................................................. 12 Anthozoa Anthopleura artemisia ................................. 14 Anthopleura elegantissima .................................................. 16 Haliplanella luciae .................................................................. 18 Nematostella vectensis ......................................................... 20 Metridium senile .................................................................... 22 NEMERTEA Amphiporus imparispinosus ................................................ 24 Carinoma mutabilis ................................................................ 26 Cerebratulus californiensis .................................................. 28 Lineus ruber ......................................................................... -
Nephtys Caecoides Class: Polychaeta, Errantia
Phylum: Annelida Nephtys caecoides Class: Polychaeta, Errantia Order: Phyllodocida, Phyllodocida incertae sedis A sand worm Family: Nephtyidae Description inserted just beneath dorsal cirri, which are Size: Individuals up to 100 mm in length and small, in anterior setigers (Blake and Ruff 5–8 mm in width, with up to 129 segments 2007) (Fig. 5). Beginning with the fourth seti- (Hartman 1968; Hilbig 1997). The illustrated ger, and continuing to within 10–20 setigers specimen has 115 segments (Fig. 1). from worm posterior, there is a recurved cirrus Color: A strong pigment pattern on prosto- between the parapodial lobes (Fig. 5) (Lovell mium and first few segments (Fig. 2) per- 1997). In juvenile specimens, this can be sists through preservation. Body usually nearly straight (Fauchald 1977). steel to dark grey (Hartman 1938). The interramal cirrus is larger than the General Morphology: Anterior cylindrical in dorsal cirrus, except in the last nine segments cross-section and becomes slender and rec- (Hartman 1968). tangular posteriorly (Nephtyidae, Blake and Setae (chaetae): All nephtyid setae are sim- Ruff 2007). ple and the setae of both rami are of similar Body: Trim, stiff and slender in appearance morphology. Overall, there are four main (Hartman 1938), rectangular in cross section types of nephtyid setae including capillary (Hartman and Reish 1950). Anterior third is (e.g. spinose), barred (which are pre- stout and wide, while the middle and poste- acicular), lyrate and setae with spines rior regions become slender and more flexi- (Dnestrovskaya and Jirkov 2011). Nephtys ble (Hilbig 1997). First segment is incomple- caecoides exhibits three setal types; 1) a te dorsally (Hartman 1968) (Fig. -
Polychaete Worms Definitions and Keys to the Orders, Families and Genera
THE POLYCHAETE WORMS DEFINITIONS AND KEYS TO THE ORDERS, FAMILIES AND GENERA THE POLYCHAETE WORMS Definitions and Keys to the Orders, Families and Genera By Kristian Fauchald NATURAL HISTORY MUSEUM OF LOS ANGELES COUNTY In Conjunction With THE ALLAN HANCOCK FOUNDATION UNIVERSITY OF SOUTHERN CALIFORNIA Science Series 28 February 3, 1977 TABLE OF CONTENTS PREFACE vii ACKNOWLEDGMENTS ix INTRODUCTION 1 CHARACTERS USED TO DEFINE HIGHER TAXA 2 CLASSIFICATION OF POLYCHAETES 7 ORDERS OF POLYCHAETES 9 KEY TO FAMILIES 9 ORDER ORBINIIDA 14 ORDER CTENODRILIDA 19 ORDER PSAMMODRILIDA 20 ORDER COSSURIDA 21 ORDER SPIONIDA 21 ORDER CAPITELLIDA 31 ORDER OPHELIIDA 41 ORDER PHYLLODOCIDA 45 ORDER AMPHINOMIDA 100 ORDER SPINTHERIDA 103 ORDER EUNICIDA 104 ORDER STERNASPIDA 114 ORDER OWENIIDA 114 ORDER FLABELLIGERIDA 115 ORDER FAUVELIOPSIDA 117 ORDER TEREBELLIDA 118 ORDER SABELLIDA 135 FIVE "ARCHIANNELIDAN" FAMILIES 152 GLOSSARY 156 LITERATURE CITED 161 INDEX 180 Preface THE STUDY of polychaetes used to be a leisurely I apologize to my fellow polychaete workers for occupation, practised calmly and slowly, and introducing a complex superstructure in a group which the presence of these worms hardly ever pene- so far has been remarkably innocent of such frills. A trated the consciousness of any but the small group great number of very sound partial schemes have been of invertebrate zoologists and phylogenetlcists inter- suggested from time to time. These have been only ested in annulated creatures. This is hardly the case partially considered. The discussion is complex enough any longer. without the inclusion of speculations as to how each Studies of marine benthos have demonstrated that author would have completed his or her scheme, pro- these animals may be wholly dominant both in num- vided that he or she had had the evidence and inclina- bers of species and in numbers of specimens. -
Oxygen, Ecology, and the Cambrian Radiation of Animals
Oxygen, Ecology, and the Cambrian Radiation of Animals The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Sperling, Erik A., Christina A. Frieder, Akkur V. Raman, Peter R. Girguis, Lisa A. Levin, and Andrew H. Knoll. 2013. Oxygen, Ecology, and the Cambrian Radiation of Animals. Proceedings of the National Academy of Sciences 110, no. 33: 13446–13451. Published Version doi:10.1073/pnas.1312778110 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:12336338 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA Oxygen, ecology, and the Cambrian radiation of animals Erik A. Sperlinga,1, Christina A. Friederb, Akkur V. Ramanc, Peter R. Girguisd, Lisa A. Levinb, a,d, 2 Andrew H. Knoll Affiliations: a Department of Earth and Planetary Sciences, Harvard University, Cambridge, MA, 02138 b Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA, 92093- 0218 c Marine Biological Laboratory, Department of Zoology, Andhra University, Waltair, Visakhapatnam – 530003 d Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, 02138 1 Correspondence to: [email protected] 2 Correspondence to: [email protected] PHYSICAL SCIENCES: Earth, Atmospheric and Planetary Sciences BIOLOGICAL SCIENCES: Evolution Abstract: 154 words Main Text: 2,746 words Number of Figures: 2 Number of Tables: 1 Running Title: Oxygen, ecology, and the Cambrian radiation Keywords: oxygen, ecology, predation, Cambrian radiation The Proterozoic-Cambrian transition records the appearance of essentially all animal body plans (phyla), yet to date no single hypothesis adequately explains both the timing of the event and the evident increase in diversity and disparity. -
Nephtyidae: Polychaeta) Described from the Eastern Pacific
l.OVELL: REVIEW OF NI:PIITYS FROM EASTERN PACIFIC 353 Figure 2. A. Ventral view, dissected specimen of Nephfys caecoides Hartman, 1938, showing pro- boscidial features. Paratype (LACM-AHF 0794). pdp = paired distal papillae, mup = median un- paired papilla. sp = subdistal papillae. B. Frontal view, proboscis of Nephfys caecoides Hartman, 1938, showing paired distal papillae. Paratype (LACM-AHF 0794). pdp = paired distal papillae. Bars I mm. 354 BULLETIN OF MARINE SCIENCE, VOL. 60. NO.2. 1997 118°02.53'W,Aug. 1985,Sta. 13, Rep. 4, 59 m., 1 specimen (CSDOC-P475), Rep. 3, 59 m" 1 speci- men (CSDOC-P476),Oct. 1991,Sta. 13, Rep. 4, 60 m., I specimen (LLL), Jan. 1995,Sta. 13, Rep. 2, 60 m" 2 specimens (LLL), 33°35.59'N, 118°00.05'W,luI. 1994, Sta, 11,30 m., 1 specimen (LLL), 33°35.50'N, 117°58.15'W,luI. 1994, Sta. IS, 30 m., 3 specimens (LLL), 33°34.29'N, 118°00.12'W, luI. 1994,Sta. ZB, Rep. 2, 56 m., 3 specimens (LLL); Santa Barbara Co., GOLETA, 4 Oct. 1994, Sta. B2, Rep. 1, 90 ft., 1 specimen (MBC), Sta. B4, Rep. 2, 1 specimen (MBC), Sta. B6, Rep, 3, 2 speci- mens (MBC); San Luis Obispo Co., just north of Morro Bay, 2\ May 1993,Sta. B1, Rep. 1, 2 speci- mens (MBC), Rep. 4, 1 specimen (MBC), Sta. B2, Rep. 2, 2 specimens(MBC); San Diego Co., Fisher, col., 33°\5.17'N, 117°28.09'W,17 m., 2 specimens (LLL). Corrections and Additions to the Description.-Proboscis with 20 paired distal papillae (Fig. -
Christina Pavloudi Biologist Scientific Assistant
Christina Pavloudi Biologist Scientific assistant Contact address University of the Aegean Department of Marine Sciences University Hill Mytilene 81100, Greece Tel: Fax: e-mail: [email protected] Education 2017: PhD on Marine Sciences, University of Ghent, University of Bremen, Hellenic Centre for Marine Research (MARES Joint Doctoral Programme on Marine Ecosystem Health & Conservation) Thesis title: Microbial community functioning at hypoxic sediments revealed by targeted metagenomics and RNA stable isotope probing 2012: MSc on Environmental Biology – Management of Terrestrial and Marine Resources, University of Crete, Hellenic Centre for Marine Research, Natural History Museum of Crete Thesis title: Comparative analysis of geochemical variables, macrofaunal and microbial communities in lagoonal ecosystems 2009: BSc on Biology, Aristotle University of Thessaloniki Thesis title: Comparative study of the organismic assemblages associated with the demosponge Sarcotragus foetidus Schmidt, 1862 in the coasts of Cyprus and Greece Professional Scientific Experience 2018-present: Scientific assistant at the Department of Marine Sciences, University of the Aegean 2017-present: Post-Doc Researcher (RECONNECT project), Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research, Greece 2016-2017: Research assistant (JERICO-NEXT project), Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research, Greece 2013-2015: Research assistant (LifeWatchGreece project), Institute -
Nephtys Hombergii, a Free-Living Predator in Marine Sediments: Energy Production Under Environmental Stress
Marine Biology (1997) 129: 643±650 Ó Springer-Verlag 1997 C. Arndt á D. Schiedek Nephtys hombergii, a free-living predator in marine sediments: energy production under environmental stress Received: 28 May 1997 / Accepted: 21 June 1997 Abstract Nephtys hombergii is a free-living, burrowing depths, particularly in muddy or clayed sand (Rainer predator in marine sediments. The worm is, therefore, 1991). It has been recorded in the Mediterranean and exposed to various environmental conditions which eastern Atlantic north to the Barents Sea, including the tube-dwelling polychaetes of the same habitat most North Sea and the western Baltic (Hartmann-SchroÈ der likely do not encounter. The worms have to survive 1996). It shows a relatively high tolerance to a wide periods of severe hypoxia and sulphide exposure, while range of salinities and is suggested as an important in- at the same time, they have to maintain agility in order termediate predator, feeding on small endobenthic in- to feed on other invertebrates. N. hombergii is adapted vertebrates (Schubert and Reise 1986; Beukema 1987). to these conditions by utilising several strategies. The As a sediment dweller without a permanent tube, species has a remarkably high content of phosphagen N. hombergii is mostly found in reduced sediment areas (phosphoglycocyamine), which is the primary energy such as the intertidal ¯ats of the Wadden Sea, where it source during periods of environmental stress. With in- has to cope with restricted oxygen availability and creasing hypoxia, energy is also provided via anaerobic concomitant sulphide exposure of up to 1 mM (Giere glycolysis (pO2 < 7 kPa), with strombine as the main 1992; Thiermann et al. -
Discovery and Evolution of Novel Hemerythrin Genes in Annelid Worms Elisa M
Costa-Paiva et al. BMC Evolutionary Biology (2017) 17:85 DOI 10.1186/s12862-017-0933-z RESEARCHARTICLE Open Access Discovery and evolution of novel hemerythrin genes in annelid worms Elisa M. Costa-Paiva1,2, Nathan V. Whelan2,3, Damien S. Waits2, Scott R. Santos2, Carlos G. Schrago1 and Kenneth M. Halanych2* Abstract Background: Despite extensive study on hemoglobins and hemocyanins, little is known about hemerythrin (Hr) evolutionary history. Four subgroups of Hrs have been documented, including: circulating Hr (cHr), myohemerythrin (myoHr), ovohemerythrin (ovoHr), and neurohemerythrin (nHr). Annelids have the greatest diversity of oxygen carrying proteins among animals and are the only phylum in which all Hr subgroups have been documented. To examine Hr diversity in annelids and to further understand evolution of Hrs, we employed approaches to survey annelid transcriptomes in silico. Results: Sequences of 214 putative Hr genes were identified from 44 annelid species in 40 different families and Bayesian inference revealed two major clades with strong statistical support. Notably, the topology of the Hr gene tree did not mirror the phylogeny of Annelida as presently understood, and we found evidence of extensive Hr gene duplication and loss in annelids. Gene tree topology supported monophyly of cHrs and a myoHr clade that included nHrs sequences, indicating these designations are functional rather than evolutionary. Conclusions: The presence of several cHrs in early branching taxa suggests that a variety of Hrs were present in the common ancestor of extant annelids. Although our analysis was limited to expressed-coding regions, our findings demonstrate a greater diversity of Hrs among annelids than previously reported. -
Identification Key to Nephtyidae (Annelida) of the Sea of Okhotsk
A peer-reviewed open-access journal ZooKeys 684: 1–18 (2017)Identification key to Nephtyidae of the Sea of Okhotsk( Annelida) 1 doi: 10.3897/zookeys.684.12180 REVIEW ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Identification key to Nephtyidae (Annelida) of the Sea of Okhotsk Inna L. Alalykina1, Nataliya Yu. Dnestrovskaya2, Igor A. Jirkov2 1 A.V. Zhirmunsky Institute of Marine Biology, National Scientific Center of Marine Biology, Far Eastern Branch, Russian Academy of Sciences, ul. Pal’chevskogo 17, Vladivostok, 690041 Russia 2 Faculty of Biology, Lomonosov Moscow State University, Moscow, 119234 Russia Corresponding author: Nataliya Yu. Dnestrovskaya ([email protected]) Academic editor: C. Glasby | Received 8 February 2017 | Accepted 6 April 2017 | Published 11 July 2017 http://zoobank.org/E9901864-F3FD-4CBC-8DBB-03C1C4AA4FED Citation: Alalykina IL, Dnestrovskaya NY, Jirkov IA (2017) Identification key to Nephtyidae (Annelida) of the Sea of Okhotsk. ZooKeys 684: 1–18. https://doi.org/10.3897/zookeys.684.12180 Abstract Currently, 15 species of Nephtyidae (Annelida) are known from the Sea of Okhotsk (north-western Pacific). A new user-friendly identification key is presented with a brief description for each species. The taxonomic positions of three closely related species, Nephtys brachycephala Moore, 1903, N. schmitti Hartman, 1938 and N. paradoxa Malm, 1874, are revised. The distributions of two species,Nephtys discors Ehlers, 1968 and N. assignis Hartman, 1950, are discussed. Keywords Aglaophamus, Micronephthys, Nephtys, Polychaeta, north-western Pacific Introduction Nephtyids are benthic polychaetes occurring worldwide from the intertidal to abyssal depths and mainly inhabiting soft sediments. Most of them are actively burrowing carnivores, although several species may be subsurface deposit feeders (Jumars et al. -
Natural and Anthropogenic Disturbance in Mcmurdo Sound, Antarctica: Iceberg Scours, Human-Derived Pollutants, and Their Effects on Benthic Communities
San Jose State University SJSU ScholarWorks Master's Theses Master's Theses and Graduate Research Fall 2015 Natural and Anthropogenic Disturbance in McMurdo Sound, Antarctica: Iceberg Scours, Human-Derived Pollutants, and their Effects on Benthic Communities Clint Alan Collins San Jose State University Follow this and additional works at: https://scholarworks.sjsu.edu/etd_theses Recommended Citation Collins, Clint Alan, "Natural and Anthropogenic Disturbance in McMurdo Sound, Antarctica: Iceberg Scours, Human-Derived Pollutants, and their Effects on Benthic Communities" (2015). Master's Theses. 4629. DOI: https://doi.org/10.31979/etd.bu3s-5bp7 https://scholarworks.sjsu.edu/etd_theses/4629 This Thesis is brought to you for free and open access by the Master's Theses and Graduate Research at SJSU ScholarWorks. It has been accepted for inclusion in Master's Theses by an authorized administrator of SJSU ScholarWorks. For more information, please contact [email protected]. NATURAL AND ANTHROPOGENIC DISTURBANCE IN MCMURDO SOUND, ANTARCTICA: ICEBERG SCOURS, HUMAN-DERIVED POLLUTANTS, AND THEIR EFFECTS ON BENTHIC COMMUNITIES A Thesis Presented to The Faculty of the Department of Marine Science San Jose State University In Partial Fulfillment Of the Requirements for the Degree Masters in Marine Science by Clint Alan Collins December 2015 © 2015 Clint A. Collins ALL RIGHTS RESERVED The Designated Thesis Committee Approves the Thesis Titled NATURAL AND ANTHROPOGENIC DISTURBANCE IN MCMURDO SOUND, ANTARCTICA: ICEBERG SCOURS, HUMAN-DERIVED POLLUTANTS, AND THEIR EFFECTS ON BENTHIC COMMUNITIES by Clint Alan Collins APPROVED FOR THE DEPARTMENT OF MARINE SCIENCE SAN JOSÉ STATE UNIVERSITY December 2015 Dr. Stacy Kim Moss Landing Marine Laboratories Dr. Ivano Aiello Moss Landing Marine Laboratories Dr.