Odontogenesis-Associated Phosphoprotein Truncation Blocks
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Experimental Induction of Odontoblast Differentiation and Stimulation During Preparative Processes
Cells and Materials Volume 3 Number 2 Article 8 1993 Experimental Induction of Odontoblast Differentiation and Stimulation During Preparative Processes H. Lesot Institut de Biologie Médicale C. Begue-Kirn Institut de Biologie Médicale M. D. Kubler Institut de Biologie Médicale J. M. Meyer Institut de Biologie Médicale A. J. Smith Dental School, Birmingham See next page for additional authors Follow this and additional works at: https://digitalcommons.usu.edu/cellsandmaterials Part of the Biomedical Engineering and Bioengineering Commons Recommended Citation Lesot, H.; Begue-Kirn, C.; Kubler, M. D.; Meyer, J. M.; Smith, A. J.; Cassidy, N.; and Ruch, J. V. (1993) "Experimental Induction of Odontoblast Differentiation and Stimulation During Preparative Processes," Cells and Materials: Vol. 3 : No. 2 , Article 8. Available at: https://digitalcommons.usu.edu/cellsandmaterials/vol3/iss2/8 This Article is brought to you for free and open access by the Western Dairy Center at DigitalCommons@USU. It has been accepted for inclusion in Cells and Materials by an authorized administrator of DigitalCommons@USU. For more information, please contact [email protected]. Experimental Induction of Odontoblast Differentiation and Stimulation During Preparative Processes Authors H. Lesot, C. Begue-Kirn, M. D. Kubler, J. M. Meyer, A. J. Smith, N. Cassidy, and J. V. Ruch This article is available in Cells and Materials: https://digitalcommons.usu.edu/cellsandmaterials/vol3/iss2/8 Cells and Materials, Vol. 3, No. 2, 1993 (Pages201-217) 1051-6794/93$5. 00 +. 00 Scanning Microscopy International, Chicago (AMF O'Hare), IL 60666 USA EXPERIMENTAL INDUCTION OF ODONTOBLAST DIFFERENTIATION AND STIMULATION DURING REPARATIVE PROCESSES 1 1 1 2 2 1 H. -
Human Identification by Amelogenin Test in Libyans
American Journal of www.biomedgrid.com Biomedical Science & Research ISSN: 2642-1747 --------------------------------------------------------------------------------------------------------------------------------- Research Article Copyright@ Samir Elmrghni Human Identification by Amelogenin Test in Libyans Samir Elmrghni* and Mahmoud Kaddura Department of Forensic Medicine and Toxicology, University of Benghazi, Libya *Corresponding author: Samir Elmrghni, Faculty of Medicine, Department of Forensic Medicine and Toxicology, University of Benghazi-Libya, Benghazi, Libya. To Cite This Article: Samir Elmrghni. Human Identification by Amelogenin Test in Libyans. Am J Biomed Sci & Res. 2019 - 3(6). AJBSR. MS.ID.000737. DOI: 10.34297/AJBSR.2019.03.000737 Received: May 25, 2019 | Published: July 11, 2019 Abstract Sex typing is essential in medical diagnosis of sex-linked disease and forensic science. Gender for criminal evidence of offender is usually as reported the anomalous amelogenin results of 2 male samples (out of 238 males) represented as females (Y deletions) and another 2 samples the initial information for investigation. For individualization, identification of gender is performed in addition to the STR markers recently. We amelogenin results of the controversial samples, DNA was further used in SRY and Y-STR typing. All samples typed as males but two showed with with (X deletions) in Benghazi (Libya). The frequency in both was about 0.8%. Higher than those of the other populations reported. To confirm X chromosomes. From the results, it was highly suggested that for the controversial cases of human gender identification with amelogenin tests, amplificationKeywords: Amelogenin; of SRY gene Libyans or/and Y-STR markers will be adopted to confirm the gender [1]. Introduction gene (AMG) was precisely mapped in the p22 region on the X systems used to determine if the sample being tested is of male gene was first isolated and sequenced [2]. -
Journal of Dental Research
Journal of Dental Research http://jdr.sagepub.com/ Cell Differentiation and Matrix Organization in Engineered Teeth A. Nait Lechguer, M.L. Couble, N. Labert, S. Kuchler-Bopp, L. Keller, H. Magloire, F. Bleicher and H. Lesot J DENT RES 2011 90: 583 originally published online 4 February 2011 DOI: 10.1177/0022034510391796 The online version of this article can be found at: http://jdr.sagepub.com/content/90/5/583 Published by: http://www.sagepublications.com On behalf of: International and American Associations for Dental Research Additional services and information for Journal of Dental Research can be found at: Email Alerts: http://jdr.sagepub.com/cgi/alerts Subscriptions: http://jdr.sagepub.com/subscriptions Reprints: http://www.sagepub.com/journalsReprints.nav Permissions: http://www.sagepub.com/journalsPermissions.nav >> Version of Record - Apr 13, 2011 OnlineFirst Version of Record - Feb 4, 2011 What is This? Downloaded from jdr.sagepub.com at Service Commun de la Documentation Université de Strasbourg on September 6, 2013 For personal use only. No other uses without permission. © 2011 International & American Associations for Dental Research RESEARCH REPORTS Biomaterials & Bioengineering A. Nait Lechguer1,2, M.L. Couble3,4, N. Labert3,4, S. Kuchler-Bopp1,2, Cell Differentiation and L. Keller1,2, H. Magloire3,4, F. Bleicher3,4, Matrix Organization in and H. Lesot1,2* Engineered Teeth 1INSERM UMR 977, Faculté de Médecine, 11, rue Humann, F-67085 Strasbourg, France; 2Dental School, University of Strasbourg, Strasbourg, France; 3Université de Lyon, Faculté d’Odontologie, Rue Guillaume Paradin, F-69372 Lyon Cedex 08, France; and 4IGFL, CNRS UMR 5242, Ecole Normale Supérieure, 46 Allée d’Italie, 69364, Lyon Cedex 08, France; *corresponding author, [email protected] J Dent Res 90(5):583-589, 2011 ABSTRACT InTRODuCTIOn Embryonic dental cells were used to check a series of criteria to be achieved for tooth engineering. -
Tooth Enamel and Its Dynamic Protein Matrix
International Journal of Molecular Sciences Review Tooth Enamel and Its Dynamic Protein Matrix Ana Gil-Bona 1,2,* and Felicitas B. Bidlack 1,2,* 1 The Forsyth Institute, Cambridge, MA 02142, USA 2 Department of Developmental Biology, Harvard School of Dental Medicine, Boston, MA 02115, USA * Correspondence: [email protected] (A.G.-B.); [email protected] (F.B.B.) Received: 26 May 2020; Accepted: 20 June 2020; Published: 23 June 2020 Abstract: Tooth enamel is the outer covering of tooth crowns, the hardest material in the mammalian body, yet fracture resistant. The extremely high content of 95 wt% calcium phosphate in healthy adult teeth is achieved through mineralization of a proteinaceous matrix that changes in abundance and composition. Enamel-specific proteins and proteases are known to be critical for proper enamel formation. Recent proteomics analyses revealed many other proteins with their roles in enamel formation yet to be unraveled. Although the exact protein composition of healthy tooth enamel is still unknown, it is apparent that compromised enamel deviates in amount and composition of its organic material. Why these differences affect both the mineralization process before tooth eruption and the properties of erupted teeth will become apparent as proteomics protocols are adjusted to the variability between species, tooth size, sample size and ephemeral organic content of forming teeth. This review summarizes the current knowledge and published proteomics data of healthy and diseased tooth enamel, including advancements in forensic applications and disease models in animals. A summary and discussion of the status quo highlights how recent proteomics findings advance our understating of the complexity and temporal changes of extracellular matrix composition during tooth enamel formation. -
Amelogenic Transcriptome Profiling in Ameloblast-Like Cells Derived From
www.nature.com/scientificreports OPEN Amelogenic transcriptome profling in ameloblast-like cells derived from adult gingival epithelial cells Received: 23 May 2018 Sun-Yi Hyun1, Seyoung Mun1,2, Kyung-Jung Kang1, Jong-Chan Lim1, Shin-Young Kim1, Accepted: 29 January 2019 Kyudong Han1,2 & Young-Joo Jang 1 Published: xx xx xxxx Dental enamel is the highly mineralized tissue covering the tooth surface and is formed by ameloblasts. Ameloblasts have been known to be impossible to detect in adult tooth because they are shed by apoptosis during enamel maturation and tooth eruption. Owing to these, little was known about appropriate cell surface markers to isolate ameloblast-like cells in tissues. To overcome these problems, epithelial cells were selectively cultivated from the gingival tissues and used as a stem cell source for ameloblastic diferentiation. When gingival epithelial cells were treated with a specifed concentration of BMP2, BMP4, and TGFβ-1, the expression of ameloblast-specifc markers was increased, and both the MAPK and Smad signaling pathways were activated. Gingival epithelial cells diferentiated into ameloblast-like cells through epithelial-mesenchymal transition. By RNA-Seq analysis, we reported 20 ameloblast-specifc genes associated with cell surface, cell adhesion, and extracellular matrix function. These cell surface markers might be useful for the detection and isolation of ameloblast-like cells from dental tissues. Dentin, dental pulp, periodontal ligament, and dental enamel are developed by reciprocal interactions between dental epithelium and ectomesenchyme. Neural crest cell-derived ectomesenchyme diferentiates into odonto- blasts, periodontal ligament progenitors, cementoblasts, as well as various fibroblasts. On the other hand, enamel-forming ameloblasts diferentiate from epithelial cells originating from oral ectoderm. -
Assessment Genetics Mutations in Genes AMELX, ENAM, MMP20 and FAM83H in Inducate Amelogenesis Imperfecta Syndrome Shahin Asadi*
Haematology Open Access Open Journal Review Assessment Genetics Mutations in Genes AMELX, ENAM, MMP20 and FAM83H in Inducate Amelogenesis Imperfecta Syndrome Shahin Asadi* Director of the Division of Medical Genetics and Molecular Research, Molecular Medicine, Genetics Harvard University, USA *Correspondence to: Shahin Asadi; Director of the Division of Medical Genetics and Molecular Research, Molecular Medicine, Genetics Harvard University, USA; E-mail: [email protected] Received: March 28th, 2019; Revised: March 29th, 2019; Accepted: March 29th, 2019; Published: March 30th, 2019 Citation: Carlos TJ, Ignacio HD, Xavier SI, Ariel LE. Assessment genetics mutations in genes AMELX,ENAM, MMP20 and FAM83H in inducate amelogenesis imperfecta syndrome. Haemat Open A Open J. 2019; I(1): 5-8. ABSTRACT Defective amelogenesis syndrome is a genetic disorder in the development of teeth. The researchers described at least 14 types of incomplete amelogenesis disorders. Mutations in the AMELX, ENAM, MMP20, and FAM83H genes can cause malformation of the amelogenesis syndrome. Keywords: Amelogenesis syndrome, AMELX, ENAM, MMP20, FAM83H genes, Teeth disorders.. GENERALIZATIONS OF INCOMPLETE AMELOGENESIS cific dental disorders and hereditary patterns. Additionally, incomplete SYNDROME amelogenesis syndrome can occur alone without any other symptoms or symptoms, or it can occur as part of a syndrome that affects different Defective amelogenesis syndrome is a genetic disorder in the develop- parts of the body.2 ment of teeth. This condition causes the teeth to be abnormally small, colored, pitted or perforated, and are prone to wear and breakage. Other Figure 2. Another view of dental disorders in amelogenesis syndrome dental disorders may also occur in incomplete amelogenesis syndrome. These defects, which vary among people affected, can affect the teeth (the child) and permanent teeth (adults).1 Figure 1. -
Amelogenin Gene Influence on Enamel Defects of Cleft Lip and Palate Patients
ORIGINAL RESEARCH Genetic and Molecular Biology Amelogenin gene influence on enamel defects of cleft lip and palate patients Abstract: The aim of this study was to investigate the occurrence of mutations in the amelogenin gene (AMELX) in patients with cleft lip Fernanda Veronese OLIVEIRA(a) Thiago José DIONÍSIO(b) and palate (CLP) and enamel defects (ED). A total of 165 patients were Lucimara Teixeira NEVES(b) divided into four groups: with CLP and ED (n=46), with CLP and with- Maria Aparecida Andrade out ED (n = 34), without CLP and with ED (n = 34), and without CLP Moreira MACHADO(a) Carlos Ferreira SANTOS(b) or ED (n = 51). Genomic DNA was extracted from saliva followed by Thais Marchini OLIVEIRA(a) conducting a Polymerase Chain Reaction and direct DNA sequencing of exons 2 through 7 of AMELX. Mutations were found in 30% (n = 14), (a) Department of Pediatric Dentistry, 35% (n = 12), 11% (n = 4) and 13% (n = 7) of the subjects from groups 1, 2, Orthodontics and Community Health, Bauru 3 and 4, respectively. Thirty seven mutations were detected and distrib- School of Dentistry, University of São Paulo, Bauru, SP, Brazil. uted throughout exons 2 (1 mutation – 2.7%), 6 (30 mutations – 81.08%) and 7 (6 mutations – 16.22%) of AMELX. No mutations were found in (b) Department of Biological Sciences, Bauru School of Dentistry, University of São Paulo, exons 3, 4 or 5. Of the 30 mutations found in exon 6, 43.34% (n = 13), Bauru, SP, Brazil. 23.33% (n = 7), 13.33% (n = 4) and 20% (n = 6) were found in groups 1, 2, 3 and 4, respectively. -
Discovery of Genes by Phylocsf Supplemental
Supplemental Materials for Discovery of high-confidence human protein-coding genes and exons by whole-genome PhyloCSF helps elucidate 118 GWAS loci Supplemental Methods ....................................................................................................................... 2 Supplemental annotation methods ........................................................................................................... 2 Manual annotation overview ...................................................................................................................................... 2 Summary diagram for the workflow used in this study ................................................................................. 3 Transcriptomics analysis ............................................................................................................................................. 3 Comparative annotation ............................................................................................................................................... 4 Overlap of novel annotations with transposon sequences ........................................................................... 6 Assessing the novelty of annotations ...................................................................................................................... 7 Additional considerations for the annotation of PCCRs in other species ............................................... 7 PhyloCSF and browser tracks .................................................................................................................... -
Supplementary Table S4. FGA Co-Expressed Gene List in LUAD
Supplementary Table S4. FGA co-expressed gene list in LUAD tumors Symbol R Locus Description FGG 0.919 4q28 fibrinogen gamma chain FGL1 0.635 8p22 fibrinogen-like 1 SLC7A2 0.536 8p22 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 DUSP4 0.521 8p12-p11 dual specificity phosphatase 4 HAL 0.51 12q22-q24.1histidine ammonia-lyase PDE4D 0.499 5q12 phosphodiesterase 4D, cAMP-specific FURIN 0.497 15q26.1 furin (paired basic amino acid cleaving enzyme) CPS1 0.49 2q35 carbamoyl-phosphate synthase 1, mitochondrial TESC 0.478 12q24.22 tescalcin INHA 0.465 2q35 inhibin, alpha S100P 0.461 4p16 S100 calcium binding protein P VPS37A 0.447 8p22 vacuolar protein sorting 37 homolog A (S. cerevisiae) SLC16A14 0.447 2q36.3 solute carrier family 16, member 14 PPARGC1A 0.443 4p15.1 peroxisome proliferator-activated receptor gamma, coactivator 1 alpha SIK1 0.435 21q22.3 salt-inducible kinase 1 IRS2 0.434 13q34 insulin receptor substrate 2 RND1 0.433 12q12 Rho family GTPase 1 HGD 0.433 3q13.33 homogentisate 1,2-dioxygenase PTP4A1 0.432 6q12 protein tyrosine phosphatase type IVA, member 1 C8orf4 0.428 8p11.2 chromosome 8 open reading frame 4 DDC 0.427 7p12.2 dopa decarboxylase (aromatic L-amino acid decarboxylase) TACC2 0.427 10q26 transforming, acidic coiled-coil containing protein 2 MUC13 0.422 3q21.2 mucin 13, cell surface associated C5 0.412 9q33-q34 complement component 5 NR4A2 0.412 2q22-q23 nuclear receptor subfamily 4, group A, member 2 EYS 0.411 6q12 eyes shut homolog (Drosophila) GPX2 0.406 14q24.1 glutathione peroxidase -
Supporting Online Material
1 Conserved Transcriptomic Profiles Underpin Monogamy across 2 Vertebrates 3 4 Rebecca L. Younga,b,1, Michael H. Ferkinc, Nina F. Ockendon-Powelld, Veronica N. Orre, 5 Steven M. Phelpsa,f, Ákos Pogányg, Corinne L. Richards-Zawackih, Kyle Summersi, 6 Tamás Székelyd,j,k, Brian C. Trainore, Araxi O. Urrutiaj,l, Gergely Zacharm, Lauren A. 7 O’Connelln, and Hans A. Hofmanna,b,f,1 8 9 1correspondence to: [email protected]; [email protected] 10 1 www .pnas.org/cgi/doi/10.1073/pnas.1813775115 11 Materials and Methods 12 Sample collection and RNA extraction 13 Reproductive males of each focal species were sacrificed and brains were rapidly 14 dissected and stored to preserve RNA (species-specific details provided below). All animal 15 care and use practices were approved by the respective institutions. For each species, 16 RNA from three individuals was pooled to create an aggregate sample for transcriptome 17 comparison. The focus of this study is to characterize similarity among species with 18 independent species-level transitions to a monogamous mating system rather than to 19 characterize individual-level variation in gene expression. Pooled samples are reflective 20 of species-level gene expression variation of each species and limit potentially 21 confounding individual variation for species-level comparisons (1, 2). While exploration of 22 individual variation is critical to identify mechanisms underlying differences in behavioral 23 expression, high levels of variation between two pooled samples of conspecifics could 24 obscure more general species-specific gene expression patterns. Note that two pooled 25 replicates per species would not be sufficiently large for estimating within species 26 variance, and the effect of an outlier within a pool of two individuals would be considerable. -
X-Linked Diseases: Susceptible Females
REVIEW ARTICLE X-linked diseases: susceptible females Barbara R. Migeon, MD 1 The role of X-inactivation is often ignored as a prime cause of sex data include reasons why women are often protected from the differences in disease. Yet, the way males and females express their deleterious variants carried on their X chromosome, and the factors X-linked genes has a major role in the dissimilar phenotypes that that render women susceptible in some instances. underlie many rare and common disorders, such as intellectual deficiency, epilepsy, congenital abnormalities, and diseases of the Genetics in Medicine (2020) 22:1156–1174; https://doi.org/10.1038/s41436- heart, blood, skin, muscle, and bones. Summarized here are many 020-0779-4 examples of the different presentations in males and females. Other INTRODUCTION SEX DIFFERENCES ARE DUE TO X-INACTIVATION Sex differences in human disease are usually attributed to The sex differences in the effect of X-linked pathologic variants sex specific life experiences, and sex hormones that is due to our method of X chromosome dosage compensation, influence the function of susceptible genes throughout the called X-inactivation;9 humans and most placental mammals – genome.1 5 Such factors do account for some dissimilarities. compensate for the sex difference in number of X chromosomes However, a major cause of sex-determined expression of (that is, XX females versus XY males) by transcribing only one disease has to do with differences in how males and females of the two female X chromosomes. X-inactivation silences all X transcribe their gene-rich human X chromosomes, which is chromosomes but one; therefore, both males and females have a often underappreciated as a cause of sex differences in single active X.10,11 disease.6 Males are the usual ones affected by X-linked For 46 XY males, that X is the only one they have; it always pathogenic variants.6 Females are biologically superior; a comes from their mother, as fathers contribute their Y female usually has no disease, or much less severe disease chromosome. -
Bioinformatics Analysis Reveals Genes Involved in the Pathogenesis of Ameloblastoma and Keratocystic Odontogenic Tumor
IJMCM Original Article Autumn 2016, Vol 5, No 4 Bioinformatics Analysis Reveals Genes Involved in the Pathogenesis of Ameloblastoma and Keratocystic Odontogenic Tumor Eliane Macedo Sobrinho Santos1,2, Hércules Otacílio Santos3, Ivoneth dos Santos Dias4, Sérgio Henrique Santos5, Alfredo Maurício Batista de Paula1, John David Feltenberger6, André Luiz Sena Guimarães1, Lucyana Conceição Farias¹ 1. Department of Dentistry, Universidade Estadual de Montes Claros, Minas Gerais, Brazil. 2. Instituto Federal do Norte de Minas Gerais-Campus Araçuaí, Minas Gerais, Brazil. 3. Instituto Federal do Norte de Minas Gerais-Campus Salinas, Minas Gerais, Brazil. 4. Department of Biology, Universidade Estadual de Montes Claros, Minas Gerais, Brazil. 5. Department of Pharmacology, Universidade Federal de Minas Gerais, Brazil. 6. Texas Tech University Health Science Center, Lubbock, TX, USA. Submmited 10 August 2016; Accepted 10 October 2016; Published 6 Decemmber 2016 Pathogenesis of odontogenic tumors is not well known. It is important to identify genetic deregulations and molecular alterations. This study aimed to investigate, through bioinformatic analysis, the possible genes involved in the pathogenesis of ameloblastoma (AM) and keratocystic odontogenic tumor (KCOT). Genes involved in the pathogenesis of AM and KCOT were identified in GeneCards. Gene list was expanded, and the gene interactions network was mapped using the STRING software. “Weighted number of links” (WNL) was calculated to identify “leader genes” (highest WNL). Genes were ranked by K-means method and Kruskal- Wallis test was used (P<0.001). Total interactions score (TIS) was also calculated using all interaction data generated by the STRING database, in order to achieve global connectivity for each gene. The topological and ontological analyses were performed using Cytoscape software and BinGO plugin.