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Conference Book
www.bsmiab.org /conference-2020 Bangladesh Society for Community of Microbiology, Immunology, Biotechnology (COB) and Advanced Biotechnology (BSMIAB) INTERNATIONAL 2 2 BSMIAB-COB CONFERENCE FULLY VIRTUAL CONFERENCE NOVEMBER 6-8 The 1st BSMIAB-COB International Conference on COVID-19 Pandemic November 6 (Fri)- 8 (Sun), 2020 CONFERENCE BOOK Sponsors Supporters From December 2019 near in Wuhan City, Hubei Province, China whole world fighting with CoronaVirus Coronavirus disease (COVID-19) is an infectious disease caused by the newly discovered “SARS-CoV-2” after named coronavirus . Most people infected with the SARS-CoV-2 virus will experience mild to moderate respiratory illness and recover without requiring special treatment. Older people, and those with underlying medical problems like cardiovascular disease, diabetes, chronic respiratory disease, and cancer are more likely to develop serious illness. The best way to prevent and slow down transmission is to be well informed about the SARS-CoV-2 virus, the disease it causes and how it spreads. Protect yourself and others from infection by washing your hands or using an alcohol based rub frequently and not touching your face. The virus spreads primarily through droplets of saliva COVID-19 or discharge from the nose when an infected person coughs or sneezes, so it’s important that you also practice respiratory etiquette (for example, by coughing into a flexed elbow). Source: WHO COVID-19 is still imposing a global threat on overall livelihood and economy. In order to overcome this, scientists all over the world are sacrificing their time in deciphering the COVID-19. In addition, many biologists in Bangladesh are putting strenuous efforts to contribute to the research that would benefit the current global crisis. -
Scientific Rationale for Study Design of Community-Based Simplified Antibiotic Therapy Trials in Newborns and Young Infants With
eCommons@AKU Paediatrics and Child Health, East Africa Medical College, East Africa 2013 Scientific ationaler for study design of community-based simplified antibiotic therapy trials in newborns and young infants with clinically diagnosed severe infections or fast breathing in South Asia and sub-Saharan Africa. Anita K. M. Zaidi Aga Khan University Abdullah H. Baqui Johns Hopkins Bloomberg School of Public Health Shamim Ahmad Qazi World Health Organization Rajiv Bahl World Health Organization Samir Saha Kinshasa School of Public Health Follow this and additional works at: https://ecommons.aku.edu/eastafrica_fhs_mc_paediatr_child_health See next page for additional authors Part of the Pediatrics Commons Recommended Citation Zaidi, A. K., Baqui, A. H., Qazi, S. A., Bahl, R., Saha, S., Ayede, A. I., Adejuyigbe, E. A., Engmann, C., Esamai, F., Tshefu, A. K., Wammanda, R. D., Falade, A. G., Odebiyi, A., Gisore, P., Longombe, A. L., Ogala, W. N., Tikmani, S. S., Uddin Ahmed, A. N., Wall, S., Brandes, N., Roth, D. E., Darmstadt, G. L. (2013). Scientific rationale for study design of community-based simplified antibiotic therapy trials in newborns and young infants with clinically diagnosed severe infections or fast breathing in South Asia and sub-Saharan Africa.. The Pediatric Infectious Disease Journal, 32(9), s7-s11. Available at: https://ecommons.aku.edu/eastafrica_fhs_mc_paediatr_child_health/93 Authors Anita K. M. Zaidi, Abdullah H. Baqui, Shamim Ahmad Qazi, Rajiv Bahl, Samir Saha, Adejumoke I. Ayede, Ebunoluwa A. Adejuyigbe, Cyril Engmann, Fabian Esamai, Antoinette Kitoto Tshefu, Robinson D. Wammanda, Adegoke G. Falade, Adetanwa Odebiyi, Peter Gisore, Adrien Lokangaka Longombe, William N. Ogala, Shiyam Sundar Tikmani, A. -
Project Report
Identification and Differentiation of Acinetobacter calcoaceticus-Acinetobacter baumannii Complex by Multiplex PCR: Common Nosocomial Pathogens Among Children Project Report Session: Summer 2019 Shuborno Islam ID: 2015-3-77-001 Department of Genetic Engineering and Biotechnology East West University Identification and Differentiation of Acinetobacter calcoaceticus-Acinetobacter baumannii Complex by Multiplex PCR: Common Nosocomial Pathogens Among Children Identification and Differentiation of Acinetobacter calcoaceticus-Acinetobacter baumannii Complex by Multiplex PCR: Common Nosocomial Pathogens Among Children A project report submitted to the Department of Genetic Engineering and Biotechnology, East West University in the partial fulfillment for the Degree of Bachelor of Science in Genetic Engineering and Biotechnology Shuborno Islam ID: 2015-3-77-001 Session: Summer 2019 Department of Genetic Engineering and Biotechnology East West University August 25th, 2019. Declaration We certify that we carefully read and recommend to the Department of Genetic Engineering and Biotechnology, East West University, Dhaka for the approval of the project report entitled: “Identification and Differentiation of Acinetobacter calcoaceticus-Acinetobacter baumannii Complex by Multiplex PCR: Common Nosocomial Pathogens among Children” Submitted by Shuborno Islam for the partial fulfillment of the requirements for the Degree of Bachelor of Science in Genetic Engineering and Biotechnology. Approved by: Internal Supervisor External Supervisor _________________________ -
Director's Report
Director’s Report For the year 1997, the Centre’s progress is marked by administrative transitions, new initiatives and review of its objectives and agenda as we prepare for the third decade of the Centre’s research and programme implementation in child survival and reproductive health. The scope of activities has expanded to include: conducting research in new areas of infectious diseases; widening the spectrum of our operations research in Bangladesh; strengthening our collaboration with the Government of Bangladesh, regional institutions, and the NGO community; and enhancing our internal capacity through increased interdivisional Prof. Robert M. Suskind collaboration and the identification of new sources of support for the Director Centre. Such expansion will secure the future of the Centre as we prepare for entry into the next millennium. The administrative transition includes my appointment as new Director of the Centre following eight years of leadership under the direction of Dr. Demissie Habte whose tenure concluded in September 1997. In June 1997, the Board of Trustees appointed Mr. Jacques O. Martin, Head of Human Resources Division of Swiss Development Cooperation, as its new Chairman. The Centre continued to feel the impact of the worldwide changes in resources dedicated to development assistance. Changes in the level of support to the Centre from the aid agencies of the various donor governments reflect the shifting strategic plans and priorities of each donor in their provision of foreign assistance, support for international healthcare initiatives and population programmes worldwide. Consequently, the Centre experienced a further decline in donor support in some cases, particularly where donor countries have decided to give priority to sectors of the economy other than the healthcare sector. -
CRISPR-Cas Diversity in Clinical Salmonella Enterica Serovar Typhi Isolates from South Asian Countries
G C A T T A C G G C A T genes Article CRISPR-Cas Diversity in Clinical Salmonella enterica Serovar Typhi Isolates from South Asian Countries Arif Mohammad Tanmoy 1,2,3 , Chinmoy Saha 1 , Mohammad Saiful Islam Sajib 2, Senjuti Saha 2, Florence Komurian-Pradel 3, Alex van Belkum 4 , Rogier Louwen 1,* , Samir Kumar Saha 2,5 and Hubert P. Endtz 1,3 1 Department of Medical Microbiology and Infectious Diseases, Erasmus University Medical Center Rotterdam, 3015 CN Rotterdam, The Netherlands; [email protected] (A.M.T.); [email protected] (C.S.); [email protected] (H.P.E.) 2 Child Health Research Foundation, 23/2 SEL Huq Skypark, Block-B, Khilji Rd, Dhaka 1207, Bangladesh; [email protected] (M.S.I.S.); [email protected] (S.S.); [email protected] (S.K.S.) 3 Laboratoire des Pathogènes Emergents, Fondation Mérieux, Centre International de Recherche en Infectiologie (CIRI), INSERM U1111, 69365 Lyon, France; fl[email protected] 4 Data Analytics Unit, bioMérieux, 3, Route de Port Michaud, 38390 La Balme Les Grottes, France; [email protected] 5 Bangladesh Institute of Child Health, Dhaka Shishu Hospital, Dhaka 1207, Bangladesh * Correspondence: [email protected] Received: 27 October 2020; Accepted: 16 November 2020; Published: 18 November 2020 Abstract: Typhoid fever, caused by Salmonella enterica serovar Typhi (S. Typhi), is a global health concern and its treatment is problematic due to the rise in antimicrobial resistance (AMR). Rapid detection of patients infected with AMR positive S. Typhi is, therefore, crucial to prevent further spreading. -
Enteric Fever Cases in the Two Largest Pediatric Hospitals of Bangladesh: 2013–2014 Shampa Saha,1 Mohammad J
The Journal of Infectious Diseases SUPPLEMENT ARTICLE Enteric Fever Cases in the Two Largest Pediatric Hospitals of Bangladesh: 2013–2014 Shampa Saha,1 Mohammad J. Uddin,1 Maksuda Islam,1 Rajib C. Das,1,a Denise Garrett,2 and Samir Kumar Saha1,3, 1Child Health Research Foundation, Department of Microbiology, Dhaka Shishu (Children) Hospital, Bangladesh; 2Sabin Vaccine Institute, Washington, DC; 3Bangladesh Institute of Child Health, Dhaka Shishu (Children) Hospital, Bangladesh Background. Enteric fever predominantly affects children in low- and middle-income countries. This study examines the bur- den of enteric fever at the 2 pediatric hospitals in Dhaka, Bangladesh and assesses their capacity for inclusion in a prospective cohort study to support enteric fever prevention and control. Methods. A descriptive study of enteric fever was conducted among children admitted in 2013–2014 to inpatient departments of Dhaka Shishu and Shishu Shashthya Foundation Hospitals, sentinel hospitals of the World Health Organization-supported Invasive Bacterial Vaccine Preventable Disease surveillance platform. Results. Of 15 917 children with blood specimens received by laboratories, 2.8% (443 of 15 917) were culture positive for signif- icant bacterial growth. Sixty-three percent (279 of 443) of these isolates were confirmed as the cases of enteric fever (241Salmonella Typhi and 38 Salmonella Paratyphi A). In addition, 1591 children had suspected enteric fever. Overall, 3.6% (1870 of 51 923) were laboratory confirmed or suspected enteric fever cases (55% male, median age 2 years, 86% from Dhaka district, median hospital stay 5 days). Conclusions. The burden of enteric fever among inpatients at 2 pediatric hospitals in Dhaka, Bangladesh is substantial. -
Characterization of Antimicrobial-Resistant Gram-Negative Bacteria That Cause Neonatal Sepsis in Seven Low- and Middle-Income Countries
ARTICLES https://doi.org/10.1038/s41564-021-00870-7 Characterization of antimicrobial-resistant Gram-negative bacteria that cause neonatal sepsis in seven low- and middle-income countries Kirsty Sands 1,2,25 ✉ , Maria J. Carvalho 1,3,25 ✉ , Edward Portal1, Kathryn Thomson1, Calie Dyer1,4, Chinenye Akpulu1,5,6, Robert Andrews1, Ana Ferreira1, David Gillespie 4, Thomas Hender 1, Kerenza Hood4, Jordan Mathias1, Rebecca Milton1,4, Maria Nieto 1, Khadijeh Taiyari4, Grace J. Chan7,8,9, Delayehu Bekele 9,10, Semaria Solomon11, Sulagna Basu12, Pinaki Chattopadhyay13, Suchandra Mukherjee13, Kenneth Iregbu5, Fatima Modibbo5,6, Stella Uwaezuoke14, Rabaab Zahra15, Haider Shirazi16, Adil Muhammad15, Jean-Baptiste Mazarati17, Aniceth Rucogoza17, Lucie Gaju17, Shaheen Mehtar 18,19, Andre N. H. Bulabula19,20, Andrew Whitelaw 21,22, BARNARDS Group23,* and Timothy R. Walsh 1,24 Antimicrobial resistance in neonatal sepsis is rising, yet mechanisms of resistance that often spread between species via mobile genetic elements, ultimately limiting treatments in low- and middle-income countries (LMICs), are poorly characterized. The Burden of Antibiotic Resistance in Neonates from Developing Societies (BARNARDS) network was initiated to characterize the cause and burden of antimicrobial resistance in neonatal sepsis for seven LMICs in Africa and South Asia. A total of 36,285 neo- nates were enrolled in the BARNARDS study between November 2015 and December 2017, of whom 2,483 were diagnosed with culture-confirmed sepsis. Klebsiella pneumoniae (n = 258) was the main cause of neonatal sepsis, with Serratia marcescens (n = 151), Klebsiella michiganensis (n = 117), Escherichia coli (n = 75) and Enterobacter cloacae complex (n = 57) also detected. We present whole-genome sequencing, antimicrobial susceptibility and clinical data for 916 out of 1,038 neonatal sepsis isolates (97 isolates were not recovered from initial isolation at local sites).