Comparative Analysis of Regression Regularization Methods for Life Expectancy Prediction
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Instrumental Regression in Partially Linear Models
10-167 Research Group: Econometrics and Statistics September, 2009 Instrumental Regression in Partially Linear Models JEAN-PIERRE FLORENS, JAN JOHANNES AND SEBASTIEN VAN BELLEGEM INSTRUMENTAL REGRESSION IN PARTIALLY LINEAR MODELS∗ Jean-Pierre Florens1 Jan Johannes2 Sebastien´ Van Bellegem3 First version: January 24, 2008. This version: September 10, 2009 Abstract We consider the semiparametric regression Xtβ+φ(Z) where β and φ( ) are unknown · slope coefficient vector and function, and where the variables (X,Z) are endogeneous. We propose necessary and sufficient conditions for the identification of the parameters in the presence of instrumental variables. We also focus on the estimation of β. An incorrect parameterization of φ may generally lead to an inconsistent estimator of β, whereas even consistent nonparametric estimators for φ imply a slow rate of convergence of the estimator of β. An additional complication is that the solution of the equation necessitates the inversion of a compact operator that has to be estimated nonparametri- cally. In general this inversion is not stable, thus the estimation of β is ill-posed. In this paper, a √n-consistent estimator for β is derived under mild assumptions. One of these assumptions is given by the so-called source condition that is explicitly interprated in the paper. Finally we show that the estimator achieves the semiparametric efficiency bound, even if the model is heteroscedastic. Monte Carlo simulations demonstrate the reasonable performance of the estimation procedure on finite samples. Keywords: Partially linear model, semiparametric regression, instrumental variables, endo- geneity, ill-posed inverse problem, Tikhonov regularization, root-N consistent estimation, semiparametric efficiency bound JEL classifications: Primary C14; secondary C30 ∗We are grateful to R. -
PARAMETER DETERMINATION for TIKHONOV REGULARIZATION PROBLEMS in GENERAL FORM∗ 1. Introduction. We Are Concerned with the Solut
PARAMETER DETERMINATION FOR TIKHONOV REGULARIZATION PROBLEMS IN GENERAL FORM∗ Y. PARK† , L. REICHEL‡ , G. RODRIGUEZ§ , AND X. YU¶ Abstract. Tikhonov regularization is one of the most popular methods for computing an approx- imate solution of linear discrete ill-posed problems with error-contaminated data. A regularization parameter λ > 0 balances the influence of a fidelity term, which measures how well the data are approximated, and of a regularization term, which dampens the propagation of the data error into the computed approximate solution. The value of the regularization parameter is important for the quality of the computed solution: a too large value of λ > 0 gives an over-smoothed solution that lacks details that the desired solution may have, while a too small value yields a computed solution that is unnecessarily, and possibly severely, contaminated by propagated error. When a fairly ac- curate estimate of the norm of the error in the data is known, a suitable value of λ often can be determined with the aid of the discrepancy principle. This paper is concerned with the situation when the discrepancy principle cannot be applied. It then can be quite difficult to determine a suit- able value of λ. We consider the situation when the Tikhonov regularization problem is in general form, i.e., when the regularization term is determined by a regularization matrix different from the identity, and describe an extension of the COSE method for determining the regularization param- eter λ in this situation. This method has previously been discussed for Tikhonov regularization in standard form, i.e., for the situation when the regularization matrix is the identity. -
Multiple Discriminant Analysis
1 MULTIPLE DISCRIMINANT ANALYSIS DR. HEMAL PANDYA 2 INTRODUCTION • The original dichotomous discriminant analysis was developed by Sir Ronald Fisher in 1936. • Discriminant Analysis is a Dependence technique. • Discriminant Analysis is used to predict group membership. • This technique is used to classify individuals/objects into one of alternative groups on the basis of a set of predictor variables (Independent variables) . • The dependent variable in discriminant analysis is categorical and on a nominal scale, whereas the independent variables are either interval or ratio scale in nature. • When there are two groups (categories) of dependent variable, it is a case of two group discriminant analysis. • When there are more than two groups (categories) of dependent variable, it is a case of multiple discriminant analysis. 3 INTRODUCTION • Discriminant Analysis is applicable in situations in which the total sample can be divided into groups based on a non-metric dependent variable. • Example:- male-female - high-medium-low • The primary objective of multiple discriminant analysis are to understand group differences and to predict the likelihood that an entity (individual or object) will belong to a particular class or group based on several independent variables. 4 ASSUMPTIONS OF DISCRIMINANT ANALYSIS • NO Multicollinearity • Multivariate Normality • Independence of Observations • Homoscedasticity • No Outliers • Adequate Sample Size • Linearity (for LDA) 5 ASSUMPTIONS OF DISCRIMINANT ANALYSIS • The assumptions of discriminant analysis are as under. The analysis is quite sensitive to outliers and the size of the smallest group must be larger than the number of predictor variables. • Non-Multicollinearity: If one of the independent variables is very highly correlated with another, or one is a function (e.g., the sum) of other independents, then the tolerance value for that variable will approach 0 and the matrix will not have a unique discriminant solution. -
An Overview and Application of Discriminant Analysis in Data Analysis
IOSR Journal of Mathematics (IOSR-JM) e-ISSN: 2278-5728, p-ISSN: 2319-765X. Volume 11, Issue 1 Ver. V (Jan - Feb. 2015), PP 12-15 www.iosrjournals.org An Overview and Application of Discriminant Analysis in Data Analysis Alayande, S. Ayinla1 Bashiru Kehinde Adekunle2 Department of Mathematical Sciences College of Natural Sciences Redeemer’s University Mowe, Redemption City Ogun state, Nigeria Department of Mathematical and Physical science College of Science, Engineering &Technology Osun State University Abstract: The paper shows that Discriminant analysis as a general research technique can be very useful in the investigation of various aspects of a multi-variate research problem. It is sometimes preferable than logistic regression especially when the sample size is very small and the assumptions are met. Application of it to the failed industry in Nigeria shows that the derived model appeared outperform previous model build since the model can exhibit true ex ante predictive ability for a period of about 3 years subsequent. Keywords: Factor Analysis, Multiple Discriminant Analysis, Multicollinearity I. Introduction In different areas of applications the term "discriminant analysis" has come to imply distinct meanings, uses, roles, etc. In the fields of learning, psychology, guidance, and others, it has been used for prediction (e.g., Alexakos, 1966; Chastian, 1969; Stahmann, 1969); in the study of classroom instruction it has been used as a variable reduction technique (e.g., Anderson, Walberg, & Welch, 1969); and in various fields it has been used as an adjunct to MANOVA (e.g., Saupe, 1965; Spain & D'Costa, Note 2). The term is now beginning to be interpreted as a unified approach in the solution of a research problem involving a com-parison of two or more populations characterized by multi-response data. -
Statistical Foundations of Data Science
Statistical Foundations of Data Science Jianqing Fan Runze Li Cun-Hui Zhang Hui Zou i Preface Big data are ubiquitous. They come in varying volume, velocity, and va- riety. They have a deep impact on systems such as storages, communications and computing architectures and analysis such as statistics, computation, op- timization, and privacy. Engulfed by a multitude of applications, data science aims to address the large-scale challenges of data analysis, turning big data into smart data for decision making and knowledge discoveries. Data science integrates theories and methods from statistics, optimization, mathematical science, computer science, and information science to extract knowledge, make decisions, discover new insights, and reveal new phenomena from data. The concept of data science has appeared in the literature for several decades and has been interpreted differently by different researchers. It has nowadays be- come a multi-disciplinary field that distills knowledge in various disciplines to develop new methods, processes, algorithms and systems for knowledge dis- covery from various kinds of data, which can be either low or high dimensional, and either structured, unstructured or semi-structured. Statistical modeling plays critical roles in the analysis of complex and heterogeneous data and quantifies uncertainties of scientific hypotheses and statistical results. This book introduces commonly-used statistical models, contemporary sta- tistical machine learning techniques and algorithms, along with their mathe- matical insights and statistical theories. It aims to serve as a graduate-level textbook on the statistical foundations of data science as well as a research monograph on sparsity, covariance learning, machine learning and statistical inference. For a one-semester graduate level course, it may cover Chapters 2, 3, 9, 10, 12, 13 and some topics selected from the remaining chapters. -
S41598-018-25035-1.Pdf
www.nature.com/scientificreports OPEN An Innovative Approach for The Integration of Proteomics and Metabolomics Data In Severe Received: 23 October 2017 Accepted: 9 April 2018 Septic Shock Patients Stratifed for Published: xx xx xxxx Mortality Alice Cambiaghi1, Ramón Díaz2, Julia Bauzá Martinez2, Antonia Odena2, Laura Brunelli3, Pietro Caironi4,5, Serge Masson3, Giuseppe Baselli1, Giuseppe Ristagno 3, Luciano Gattinoni6, Eliandre de Oliveira2, Roberta Pastorelli3 & Manuela Ferrario 1 In this work, we examined plasma metabolome, proteome and clinical features in patients with severe septic shock enrolled in the multicenter ALBIOS study. The objective was to identify changes in the levels of metabolites involved in septic shock progression and to integrate this information with the variation occurring in proteins and clinical data. Mass spectrometry-based targeted metabolomics and untargeted proteomics allowed us to quantify absolute metabolites concentration and relative proteins abundance. We computed the ratio D7/D1 to take into account their variation from day 1 (D1) to day 7 (D7) after shock diagnosis. Patients were divided into two groups according to 28-day mortality. Three diferent elastic net logistic regression models were built: one on metabolites only, one on metabolites and proteins and one to integrate metabolomics and proteomics data with clinical parameters. Linear discriminant analysis and Partial least squares Discriminant Analysis were also implemented. All the obtained models correctly classifed the observations in the testing set. By looking at the variable importance (VIP) and the selected features, the integration of metabolomics with proteomics data showed the importance of circulating lipids and coagulation cascade in septic shock progression, thus capturing a further layer of biological information complementary to metabolomics information. -
Regularized Radial Basis Function Models for Stochastic Simulation
Proceedings of the 2014 Winter Simulation Conference A. Tolk, S. Y. Diallo, I. O. Ryzhov, L. Yilmaz, S. Buckley, and J. A. Miller, eds. REGULARIZED RADIAL BASIS FUNCTION MODELS FOR STOCHASTIC SIMULATION Yibo Ji Sujin Kim Department of Industrial and Systems Engineering National University of Singapore 119260, Singapore ABSTRACT We propose a new radial basis function (RBF) model for stochastic simulation, called regularized RBF (R-RBF). We construct the R-RBF model by minimizing a regularized loss over a reproducing kernel Hilbert space (RKHS) associated with RBFs. The model can flexibly incorporate various types of RBFs including those with conditionally positive definite basis. To estimate the model prediction error, we first represent the RKHS as a stochastic process associated to the RBFs. We then show that the prediction model obtained from the stochastic process is equivalent to the R-RBF model and derive the associated mean squared error. We propose a new criterion for efficient parameter estimation based on the closed form of the leave-one-out cross validation error for R-RBF models. Numerical results show that R-RBF models are more robust, and yet fairly accurate compared to stochastic kriging models. 1 INTRODUCTION In this paper, we aim to develop a radial basis function (RBF) model to approximate a real-valued smooth function using noisy observations obtained via black-box simulations. The observations are assumed to capture the information on the true function f through the commonly-used additive error model, d y = f (x) + e(x); x 2 X ⊂ R ; 2 where the random noise is characterized by a normal random variable e(x) ∼ N 0;se (x) , whose variance is determined by a continuously differentiable variance function se : X ! R. -
Multicollinearity Diagnostics in Statistical Modeling and Remedies to Deal with It Using SAS
Multicollinearity Diagnostics in Statistical Modeling and Remedies to deal with it using SAS Harshada Joshi Session SP07 - PhUSE 2012 www.cytel.com 1 Agenda • What is Multicollinearity? • How to Detect Multicollinearity? Examination of Correlation Matrix Variance Inflation Factor Eigensystem Analysis of Correlation Matrix • Remedial Measures Ridge Regression Principal Component Regression www.cytel.com 2 What is Multicollinearity? • Multicollinearity is a statistical phenomenon in which there exists a perfect or exact relationship between the predictor variables. • When there is a perfect or exact relationship between the predictor variables, it is difficult to come up with reliable estimates of their individual coefficients. • It will result in incorrect conclusions about the relationship between outcome variable and predictor variables. www.cytel.com 3 What is Multicollinearity? Recall that the multiple linear regression is Y = Xβ + ϵ; Where, Y is an n x 1 vector of responses, X is an n x p matrix of the predictor variables, β is a p x 1 vector of unknown constants, ϵ is an n x 1 vector of random errors, 2 with ϵi ~ NID (0, σ ) www.cytel.com 4 What is Multicollinearity? • Multicollinearity inflates the variances of the parameter estimates and hence this may lead to lack of statistical significance of individual predictor variables even though the overall model may be significant. • The presence of multicollinearity can cause serious problems with the estimation of β and the interpretation. www.cytel.com 5 How to detect Multicollinearity? 1. Examination of Correlation Matrix 2. Variance Inflation Factor (VIF) 3. Eigensystem Analysis of Correlation Matrix www.cytel.com 6 How to detect Multicollinearity? 1. -
Regularization Tools
Regularization Tools A Matlab Package for Analysis and Solution of Discrete Ill-Posed Problems Version 4.1 for Matlab 7.3 Per Christian Hansen Informatics and Mathematical Modelling Building 321, Technical University of Denmark DK-2800 Lyngby, Denmark [email protected] http://www.imm.dtu.dk/~pch March 2008 The software described in this report was originally published in Numerical Algorithms 6 (1994), pp. 1{35. The current version is published in Numer. Algo. 46 (2007), pp. 189{194, and it is available from www.netlib.org/numeralgo and www.mathworks.com/matlabcentral/fileexchange Contents Changes from Earlier Versions 3 1 Introduction 5 2 Discrete Ill-Posed Problems and their Regularization 9 2.1 Discrete Ill-Posed Problems . 9 2.2 Regularization Methods . 11 2.3 SVD and Generalized SVD . 13 2.3.1 The Singular Value Decomposition . 13 2.3.2 The Generalized Singular Value Decomposition . 14 2.4 The Discrete Picard Condition and Filter Factors . 16 2.5 The L-Curve . 18 2.6 Transformation to Standard Form . 21 2.6.1 Transformation for Direct Methods . 21 2.6.2 Transformation for Iterative Methods . 22 2.6.3 Norm Relations etc. 24 2.7 Direct Regularization Methods . 25 2.7.1 Tikhonov Regularization . 25 2.7.2 Least Squares with a Quadratic Constraint . 25 2.7.3 TSVD, MTSVD, and TGSVD . 26 2.7.4 Damped SVD/GSVD . 27 2.7.5 Maximum Entropy Regularization . 28 2.7.6 Truncated Total Least Squares . 29 2.8 Iterative Regularization Methods . 29 2.8.1 Conjugate Gradients and LSQR . -
Best Subset Selection for Eliminating Multicollinearity
Journal of the Operations Research Society of Japan ⃝c The Operations Research Society of Japan Vol. 60, No. 3, July 2017, pp. 321{336 BEST SUBSET SELECTION FOR ELIMINATING MULTICOLLINEARITY Ryuta Tamura Ken Kobayashi Yuichi Takano Tokyo University of Fujitsu Laboratories Ltd. Senshu University Agriculture and Technology Ryuhei Miyashiro Kazuhide Nakata Tomomi Matsui Tokyo University of Tokyo Institute of Tokyo Institute of Agriculture and Technology Technology Technology (Received July 27, 2016; Revised December 2, 2016) Abstract This paper proposes a method for eliminating multicollinearity from linear regression models. Specifically, we select the best subset of explanatory variables subject to the upper bound on the condition number of the correlation matrix of selected variables. We first develop a cutting plane algorithm that, to approximate the condition number constraint, iteratively appends valid inequalities to the mixed integer quadratic optimization problem. We also devise a mixed integer semidefinite optimization formulation for best subset selection under the condition number constraint. Computational results demonstrate that our cutting plane algorithm frequently provides solutions of better quality than those obtained using local search algorithms for subset selection. Additionally, subset selection by means of our optimization formulation succeeds when the number of candidate explanatory variables is small. Keywords: Optimization, statistics, subset selection, multicollinearity, linear regression, mixed integer semidefinite optimization 1. Introduction Multicollinearity, which exists when two or more explanatory variables in a regression model are highly correlated, is a frequently encountered problem in multiple regression analysis [11, 14, 24]. Such an interrelationship among explanatory variables obscures their relationship with the explained variable, leading to computational instability in model es- timation. -
On the Determination of Proper Regularization Parameter
Universität Stuttgart Geodätisches Institut On the determination of proper regularization parameter α-weighted BLE via A-optimal design and its comparison with the results derived by numerical methods and ridge regression Bachelorarbeit im Studiengang Geodäsie und Geoinformatik an der Universität Stuttgart Kun Qian Stuttgart, Februar 2017 Betreuer: Dr.-Ing. Jianqing Cai Universität Stuttgart Prof. Dr.-Ing. Nico Sneeuw Universität Stuttgart Erklärung der Urheberschaft Ich erkläre hiermit an Eides statt, dass ich die vorliegende Arbeit ohne Hilfe Dritter und ohne Benutzung anderer als der angegebenen Hilfsmittel angefertigt habe; die aus fremden Quellen direkt oder indirekt übernommenen Gedanken sind als solche kenntlich gemacht. Die Arbeit wurde bisher in gleicher oder ähnlicher Form in keiner anderen Prüfungsbehörde vorgelegt und auch noch nicht veröffentlicht. Ort, Datum Unterschrift III Abstract In this thesis, several numerical regularization methods and the ridge regression, which can help improve improper conditions and solve ill-posed problems, are reviewed. The deter- mination of the optimal regularization parameter via A-optimal design, the optimal uniform Tikhonov-Phillips regularization (a-weighted biased linear estimation), which minimizes the trace of the mean square error matrix MSE(ˆx), is also introduced. Moreover, the comparison of the results derived by A-optimal design and results derived by numerical heuristic methods, such as L-curve, Generalized Cross Validation and the method of dichotomy is demonstrated. According to the comparison, the A-optimal design regularization parameter has been shown to have minimum trace of MSE(ˆx) and its determination has better efficiency. VII Contents List of Figures IX List of Tables XI 1 Introduction 1 2 Least Squares Method and Ill-Posed Problems 3 2.1 The Special Gauss-Markov medel . -
Baseline and Interferent Correction by the Tikhonov Regularization Framework for Linear Least Squares Modeling
Baseline and interferent correction by the Tikhonov Regularization framework for linear least squares modeling Joakim Skogholt1, Kristian Hovde Liland1 and Ulf Geir Indahl1 1Faculty of Science and Technology, Norwegian University of Life Sciences,˚As, Norway Abstract Spectroscopic data is usually perturbed by noise from various sources that should be re- moved prior to model calibration. After conducting a pre-processing step to eliminate un- wanted multiplicative effects (effects that scale the pure signal in a multiplicative manner), we discuss how to correct a model for unwanted additive effects in the spectra. Our approach is described within the Tikhonov Regularization (TR) framework for linear regression model building, and our focus is on ignoring the influence of non-informative polynomial trends. This is obtained by including an additional criterion in the TR problem penalizing the resulting regression coefficients away from a selected set of possibly disturbing directions in the sam- ple space. The presented method builds on the Extended Multiplicative Signal Correction (EMSC), and we compare the two approaches on several real data sets showing that the sug- gested TR-based method may improve the predictive power of the resulting model. We discuss the possibilities of imposing smoothness in the calculation of regression coefficients as well as imposing selection of wavelength regions within the TR framework. To implement TR effi- ciently in the model building, we use an algorithm that is heavily based on the singular value decomposition (SVD). Due to some favourable properties of the SVD it is possible to explore the models (including their generalized cross-validation (GCV) error estimates) associated with a large number of regularization parameter values at low computational cost.