Supplementary Table 1. MSP Primers. Cpg Island Methylation

Supplementary Table 1. MSP Primers.

CpG Island Methylation Status Sense Antisense ADAMTS5 Unmethylated GAGTTGTGAGGTTAGTGTTGTGT ATAAATCCACACAAATCCTACACA Methylated GTTGCGAGGTTAGTGTTGCGC AATCCGCACGAATCCTACACG AGPAT3 Unmethylated TATAAGGTATTGGGTGTAGGAGGT CACTATATCAACACTTAACCATAACA Methylated AAGGTATCGGGCGTAGGAGGC CTATATCGACACTTAACCGTAACG ERG Unmethylated GTGAAAATGGTTGTGATATTAAGAT CAAACCAAACCACAATACCCTCA Methylated GAAAACGGTTGCGATATTAAGAC AACCAAACCGCGATACCCTCG HSF2BP Unmethylated AATTTTGGTAATTGAAAGGTAGTGTT ATACCCTTCTCACTAAACACCAACCA Methylated TTTGGTAATCGAAAGGTAGCGTC CCCTTCTCGCTAAACGCCAACCG ICOSLG Unmethylated GAGATTGTTTTGGGATAGGAGGT ACACAACCAACCAAAAACCTAACA Methylated GATCGTTTCGGGATAGGAGGC GCAACCGACCAAAAACCTAACG PKNOX1 Unmethylated TGTGGGTTTTGATTGTTGTAGTT CCTCCAAACCCAAACAACAACA Methylated CGGGTTTCGATTGTTGTAGTC CTCCAAACCCGAACGACAACG SIM2 Unmethylated GGGTTTTGTGGGTTTGGAGTAT AACCACAACAACCCCTCTAAACA Methylated GGTTTCGCGGGTTTGGAGTAC CCGCGACAACCCCTCTAAACG RUNX1 Unmethylated ATTTAGTTTTTGGATTTTGGTTTT AACACCCAAAAACAATCCCTACA Methylated TAGTTTTCGGATTTCGGTTTC CGCCCGAAAACAATCCCTACG SIM2 Exon2 Unmethylated GTATAGATGGTGGTTGTGGAGTT AATCCCAACTCCTTAACAACACCA Methylated ATAGATGGCGGTTGCGGAGTC CCCAACTCCTTAACGACGCCG CECR6 Unmethylated GGTAGTAGGAGGTGTTGTTGTT ACAACTCCCCAAACAACAACACA Methylated GTAGTAGGAGGCGTCGTTGTC GACTCCCCGAACAACAACACG TIMP3 Unmethylated AGTTTGGGTTGTAGTAGTTTTGTT CTAACTACAACATAAAACTCAAACA Methylated TTCGGGTTGTAGTAGTTTCGTC AACTACAACGTAAAACTCGAACG RBM9 Unmethylated TTGATTGGTTGGGATTTTTTGATTT AAATTCCCAAACTTCCCCAATCA Methylated GATTGGTCGGGATTTTTCGATTC ATTCCCGAACTTCCCCGATCG MAFF Unmethylated TTAGGTAGAGAATTGTGGTAGTTTT CCTCCACTCTAAACCACAAATCA Methylated GGTAGAGAATCGCGGTAGTTTC TCCGCTCTAAACCGCAAATCG RBX1 Unmethylated TTAAGAGGTGTGGTTATGTGTTTT ACTTCAAAACACTTCTTACCCACA Methylated AAGAGGCGTGGTTACGTGTTTC TTCAAAACGCTTCTTACCCGCG MAPK8IP2 Unmethylated TTAATTAGTGTTTGGTAGTGAAGTT TCACCTCATAACACACCCTACA Methylated ATTAGCGTTCGGTAGTGAAGTC ACCTCGTAACACGCCCTACG SHANK3 Unmethylated GAAGGTAGGTGTTGAGTTGAGTT CTACTACAAATCCAAAATACCAACA Methylated AGGTAGGCGTCGAGTTGAGTC CTACAAATCCGAAATACCGACG LIF Unmethylated GGAGTTTGTAAGTTGTTTGTTGTTT TCCTCCTCACTCCAAACACTCA Methylated AGTTTGTAAGTTGTTCGTCGTTC CTCCTCGCTCCGAACACTCG TBX1 Unmethylated GGGGTTTTGGGTATGTTGGTATT CAACAACTACAAAAAATACACCA Methylated GGTTTCGGGTACGTTGGTATC ACAACTACGAAAAATACGCCG ADRBK2 Unmethylated GAGAAGAGTAAGGTGATTTTGGTT ACTAAAACAACAAAACCAACCCCA Methylated GAAGAGTAAGGCGATTTCGGTC TAAAACGACGAAACCGACCCCG KCNJ6 Unmethylated GAGTGGAGATGTTTGTGGTGAT AACCTAAAACCAAAACAACCACA Methylated AGTGGAGATGTTTGCGGCGAC CCTAAAACCGAAACAACCGCG MGC16635 Unmethylated TGGTTTGGGAGATAGAGTTTGTT CTACAAAACACAAAAAACAAACAACA Methylated GTTCGGGAGATAGAGTTCGTC ACAAAACGCGAAAAACGAACAACG OLIG2 Unmethylated GTTTAGGGTTGTAGTTGGAATTTT ACCAAATCATCCTAATAAACCACA Methylated TTAGGGTCGTAGTCGGAATTTC CAAATCGTCCTAATAAACCGCG PP2447 Unmethylated GAAGTGATTGAGTGTTTGGGTTT AAAATCAACCTAATCCATCCTCCA Methylated AAGTGATTGAGCGTTCGGGTTC ATCGACCTAATCCGTCCTCCG GABPA Unmethylated GGAAGTGTTTTGGAGATAGTTTGT CCTAACAAACAAAACACTAACTCA Methylated AAGCGTTTCGGAGATAGTTTGC CTAACGAACAAAACGCTAACTCG TIAM1 Unmethylated GTTGTAGAGTGATTATGGGTGTAT CAATCCCACCAATACCAAACCA Methylated TGTAGAGCGATTATGGGCGTAC AATCCCACCGATACCGAACCG ITSN1 Unmethylated TTTGGATTATGGGTGGTTGTAGT CCAACCTCCCAATACAAATCCA Methylated TGGATTACGGGCGGTTGTAGC CGACCTCCCAATACGAATCCG CBR3 Unmethylated TTTTAGGTGGTTTGAAGTTTGGTTT AAAAACACAAACTCAAACCCTCCA Methylated TAGGTGGTTCGAAGTTCGGTTC AACGCGAACTCAAACCCTCCG TTC3 Unmethylated TTTTGGGTGGGAGTTAGTGAGT ACACATCCAAAAACCCAACAACA Methylated TCGGGTGGGAGTTAGCGAGC ACATCCGAAAACCCGACAACG ETS2 Unmethylated TTAGAGATTGATGAGTGTGGTGTT CCCTACCACTACAAACAAAACCA Methylated GAGATTGACGAGTGCGGTGTC CTACCGCTACGAACAAAACCG BACE2 Unmethylated GGAAGAGGTGTGGTTTGAGTTT CAACCTAACCAATCCCATCCCA Methylated GAAGAGGCGCGGTTTGAGTTC ACCTAACCGATCCCGTCCCG RIPK4 Unmethylated TTTTGGGTGGTTAGGTGTAGTGT CCTCATCAACCTATACTCCAACA Methylated TGGGCGGTTAGGTGTAGCGC TCATCGACCTATACTCCGACG U2AF1 Unmethylated GTTAGGTGAGGTGTTGTTTGTGT TCAAACTAAACACCCCCCACCA Methylated TAGGCGAGGTGTTGTTTGCGC GAACTAAACGCCCCCCACCG C21orf33 Unmethylated GAGGGGTTGTTTTGTGGGAGTT CCATCAAACACCTCCACAAACA Methylated GGGGTCGTTTCGTGGGAGTC CATCGAACGCCTCCACAAACG PFKL Unmethylated TTATTGGGGTTTTGGTGTTGGT AAAAATCCTACACCCTCAACCCA Methylated ATCGGGGTTTCGGCGTTGGC AATCCTACGCCCTCGACCCG POFUT2 Unmethylated GGAGGTTGTGGTTGTGGTTTGT CAAACTCTCATACACAACTCCCA Methylated AGGTCGTGGTTGTGGTTCGC AACTCTCATACGCGACTCCCG DGCR6 Unmethylated TAGTTATTATGGAGGGATGGGGT CCAACTCACATCATCCCAACCA Methylated TTATTACGGAGGGACGGGGC AACTCACGTCATCCCGACCG PPM1F Unmethylated GTGTTTTGTAAGTTGTTGTTGGTT AAAAAACCACAATCACCATCCACA Methylated GTTTCGTAAGTTGTTGTCGGTC AAACCGCAATCACCGTCCACG MIF Unmethylated AAGTTAGGTATGTAGTTTAGTGGT CCACTTCAAACCCAAACCACCA Methylated GTTAGGTACGTAGTTTAGCGGC ACTTCGAACCCGAACCACCG TPST2 Unmethylated TTAGGGTTATTTATTGTGGTGAGAT AACAAACCTCCAAAAAACTTCCCA Methylated GGGTTATTTATCGTGGCGAGAC GAACCTCCGAAAAACTTCCCG OSBP2 Unmethylated GGGAGTTTGTATGGGTGTTTGT AAACAACCTCCAATCAACAAAACA Methylated GGAGTTTGTATGGGCGTTCGC ACAACCTCCAATCGACGAAACG LARGE Unmethylated GAGTTGGGTGGTTGTTGTAGTT CTACAACTACTAAACAAATCCAACA Methylated AGTTGGGCGGTCGTTGTAGTC ACAACTACTAAACGAATCCGACG CBX7 Unmethylated TGGTTTGGTTATTGGTTGGGGT TACAACTCAAAAAACTACACCTCA Methylated GTTCGGTTATCGGTTGGGGC CAACTCGAAAAACTACGCCTCG A4GALT Unmethylated GGGTTTGGTGGGAGGTAGTATT CACTCCCTACCTATTAACCAACA Methylated GTTCGGCGGGAGGTAGTATC CTCCCTACCTATTAACCGACG CELSR1 Unmethylated GTTTTTGTATTTATTTGGTGAGGTT CCTAAAACCACCTAAAACCACCA Methylated TTTCGTATTTATTCGGCGAGGTC TAAAACCGCCTAAAACCGCCG