Gelatinase-Mediated Migration and Invasion of Cancer Cells
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View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Helsingin yliopiston digitaalinen arkisto Gelatinase-mediated Migration and Invasion of Cancer Cells Mikael Björklund Department of Biological and Environmental Sciences, Faculty of Biosciences, and Viikki Graduate School in Biosciences, University of Helsinki Academic Dissertation To be presented for public criticism, with the permission of the Faculty of Biosciences, University of Helsinki, in the Lecture Hall 2402 at Viikki Biocenter Bldg. 3, Helsinki, on October 22nd, 2004, at 12 p.m. Helsinki 2004 Supervised by: Docent Erkki Koivunen Department of Biological and Environmental Sciences University of Helsinki Helsinki, Finland Reviewed by: Professor Jorma Keski-Oja. Departments of Pathology and Virology Biomedicum and Haartman Institute University of Helsinki Helsinki, Finland and Professor Jyrki Heino Department of Biochemistry and Food Chemistry University of Turku Turku, Finland Opponent: Professor Antti Vaheri Department of Virology Haartman Institute University of Helsinki Helsinki, Finland ISSN: 1239-9469 ISBN: 952-10-2024-5 (printed) 952-10-2025-3 (PDF) Yliopistopaino Helsinki 2004 2 CONTENTS CONTENTS................................................................................................................................................. 3 LIST OF ORIGINAL PUBLICATIONS .................................................................................................... 5 ABBREVIATIONS...................................................................................................................................... 6 ABSTRACT................................................................................................................................................. 7 INTRODUCTION ....................................................................................................................................... 8 PHAGE DISPLAY ...................................................................................................................................... 8 PHAGE DISPLAY FORMATS.......................................................................................................................... 8 BIOPANNING WITH PHAGE DISPLAY LIBRARIES ............................................................................................ 9 APPLICATIONS OF PEPTIDE DISPLAY.......................................................................................................... 10 ANALYSIS OF PHAGE PEPTIDES ................................................................................................................. 11 Recombinant protein expression using self-splicing inteins.................................................................. 12 BIOSYNTHETIC METHODS FOR INCORPORATION OF NOVEL AMINO ACIDS .................................................... 12 Residue-specific incorporation of non-canonical amino acids by misaminoacylation ........................... 13 Site-directed incorporation of unnatural amino acids.......................................................................... 14 CURRENT APPROACHES TO INCREASE THE CHEMICAL DIVERSITY OF BIOLOGICAL DISPLAY LIBRARIES.......... 15 GELATINASES AND OTHER MATRIX METALLOPROTEINASES................................................. 17 PHYSIOLOGICAL AND PATHOLOGICAL ROLES OF GELATINASES .................................................................. 17 STRUCTURAL FEATURES OF MATRIX METALLOPROTEINASES...................................................................... 18 GELATINASE SUBSTRATES........................................................................................................................ 21 REGULATION OF MMP ACTIVITY ............................................................................................................. 23 Expression and secretion of gelatinases and other MMPs.................................................................... 24 Proenzyme activation ......................................................................................................................... 25 GELATINASE INHIBITORS................................................................................................................... 28 NATURALLY OCCURING GELATINASE INHIBITORS...................................................................................... 28 SYNTHETIC GELATINASE INHIBITORS ........................................................................................................ 31 CELL MIGRATION AND INVASION.................................................................................................... 33 REGULATION OF CELL MIGRATION............................................................................................................ 33 MULTIPLE ROLES OF PROTEINASES IN CELL MIGRATION AND INVASION ...................................................... 35 CELL SURFACE ASSOCIATIONS OF THE GELATINASES ................................................................................. 37 OTHER PROTEASES IN CELL MIGRATION AND INVASION ............................................................................. 40 GELATINASES IN TUMOR PROGRESSION ....................................................................................... 43 ANGIOGENESIS ........................................................................................................................................ 43 METASTASIS............................................................................................................................................ 44 CANCER-ASSOCIATED INFLAMMATION...................................................................................................... 46 DUAL ROLE OF GELATINASES IN CANCER .................................................................................................. 47 THERAPEUTIC POSSIBILITIES WITH THE MMP INHIBITORS .................................................... 48 AIMS OF THIS STUDY............................................................................................................................ 50 MATERIAL AND METHODS................................................................................................................. 51 RESULTS AND DISCUSSION................................................................................................................. 55 BIOSYNTHESIS OF PHAGE DISPLAY PEPTIDES (I, III-IV).............................................................................. 55 INCREASE OF SERUM STABILITY OF GELATINASE INHIBITOR PEPTIDE CTT BY INCORPORATION OF A 5- FLUOROTRYPTOPHAN (I) .......................................................................................................................... 55 INCORPORATION OF AMINO ACID ANALOGUES INTO PHAGE DISPLAY LIBRARIES (II) .................................... 56 3 INHIBITION OF MMP-9 INTERACTION WITH αM INTEGRIN I DOMAIN BY PHAGE DISPLAY PEPTIDES CONTAING A DDGW MOTIF (III) ...............................................................................................................................56 IDENTIFICATION OF DOMAIN-SPECIFIC LIGANDS OF MMP-9 THAT INHIBIT TUMOR CELL MIGRATION AND INVASION (IV) .........................................................................................................................................57 MMP-9 INTERACTS WITH THE UROKINASE-PLASMINOGEN ACTIVATOR RECEPTOR AND THE INTEGRIN β CHAIN (IV).........................................................................................................................................................58 IDENTIFICATION OF A SMALL MOLECULE INHIBITOR OF αMβ2 INTEGRIN-DEPENDENT LEUKEMIA CELL MIGRATION (V)........................................................................................................................................59 CONCLUDING REMARKS.....................................................................................................................61 ACKNOWLEDGEMENTS.......................................................................................................................64 REFERENCES ..........................................................................................................................................65 4 LIST OF ORIGINAL PUBLICATIONS This thesis is based on the following original articles, which are referred to by their Roman numerals in the text. I Björklund, M., Valtanen, H., Savilahti, H. and Koivunen, E: Use of intein-directed peptide biosynthesis to improve serum stability and bioactivity of a gelatinase inhibitory peptide. Combinatorial Chemistry and High Throughput Screening 6, 29-35, 2003. II Björklund, M. and Koivunen, E: Steps towards phage display libraries with an extended amino acid repertoire. Letters in Drug Design & Discovery 1, 163-167, 2004. III Stefanidakis, M., Björklund, M., Ihanus, E., Gahmberg, C. G. and Koivunen, E: Identification of a negatively charged peptide motif within the catalytic domain of progelatinases that mediates binding to leukocyte β2 integrins. Journal of Biological Chemistry, 278, 34674-84, 2003. IV Björklund, M., Heikkilä, P. and Koivunen, E: Peptide inhibition of catalytic and noncatalytic activities of matrix metalloproteinase-9 blocks tumor cell migration and invasion. Journal of Biological Chemistry, 279, 29589-97, 2004. V Björklund, M. and Koivunen, E: A small-molecule stabilizing the active conformation of the αM integrin I domain inhibits leukemia cell migration. Submitted, 2004. The original articles