Signal Molecules Involved in Plant Embryogenesis

Total Page:16

File Type:pdf, Size:1020Kb

Signal Molecules Involved in Plant Embryogenesis Plant Molecular Biology 26: 1305-1313, 1994. © 1994 Kluwer Academic Publishers. Printed in Belgium. 1305 Signal molecules involved in plant embryogenesis Ed D.L. Schmidt, Anke J. de Jong and Sacco C. de Vries* Department of Molecular Biology, Wageningen Agricultural University, Dreijenlaan 3, 6703 HA Wageningen, The Netherlands (* author for correspondence) Received 10 May 1994; accepted 11 May 1994 Key words: zygotic embryogenesis, somatic embryogenesis, chitinase, nod factor, signal molecules Abstract In plant embryogenesis, inductive interactions mediated by diffusable signal molecules are most likely of great importance. Evidence has been presented that at late globular stages in plant embryogenesis, perturbation of the polar auxin transport results in abberrant embryo morphology. Rhizobium lipo- oligosaccharides or Nod factors are a newly discovered class of bacterial molecules that are able to trigger initial steps in root nodule development in legumes. Part of the activity of Nod factors may be directed towards alteration of endogenous plant growth regulator balance. The same bacterial Nod factors promoted the formation of globular embryos in the carrot cell line ts 11. Whether there exist plant ana- logues of the Nod factors and whether these molecules are active as a more universal control system perhaps designed to initiate and or mediate gradients in auxin and cytokinin remains to be determined. Introduction is highly vacuolated. Dual fertilization of the dip- loid central cell and the haploid egg cell results in Currently there is a wide and increasing interest the endosperm and the zygote respectively. The in the molecular-genetic analysis of plant embryo- first zygotic division is asymmetrical and yields a genesis. Detailed descriptions of gametogenesis small apical cell and a large basal cell. The basal and embryogenesis have been the subject of cell remains positioned at the micropylar pole of many recent studies [1-8] as well as reviews the embryo sac, and undergoes a series of trans- [9-15] and therefore will only be recapitulated versal divisions to form the suspensor. From the briefly. uppermost cell of the suspensor, the hypophysial The male gametophytes or pollen grains are cell, the centre of the future root meristem is formed in the anther, while the female gameto- formed [17]. The apical cell undergoes three di- phyte or embryo sac is formed in the pistil. In visions, resulting in the octant stage embryo angiosperms that exhibit the polygonum type [ 16 ] proper. Tangential divisions then set apart the it consists of seven cells: the egg cell, two syner- protoderm cells, from which the epidermis is de- gids, the central cell and three antipodal cells. The rived. Development of the Arabidopsis embryo polarized egg cell and synergids are positioned at from fertilization, through the octant, globular, the micropylar pole of the embryo sac. The po- triangular, heart, torpedo and bent-cotyledon larity of the egg cell is reflected in the position of stages, to the mature desiccated embryo, has been the nucleus and most of the cytoplasm at the subdivided into a sequence of 20 different stages chalazal side of the cell, while the micropylar part [3]. [69] 1306 While the above-described developmental se- Signal molecules in zygotic embryogenesis quence that gives rise to the Arabidopsis embryo appears to involve a highly predictable series of Two mechanisms appear to be universally used in divisions, it is important to note that this is but animal embryogenesis to initiate cell differentia- one of the types of embryo development in plants tion. The first of these is a polarization of cellu- [ 16]. Many variations in the plants and positions lar determinants, sometimes, but not always, fol- of early cell divisions and in suspensor morphol- lowed by asymmetric cell division [29]. In plants, ogy have been described, with apparently little or fertilization is followed by an extensive redistri- no consequence for the eventual seedling mor- bution of organelles resulting in polarization of phology. Recently the systematic genetic dissec- the zygote. Asymmetric cell division occurs fre- tion of the formation of the zygotic embryo has quently in plants, and the analysis of the Arabi- been initiated [18-21]. Based on the mutant dopsis gnom mutant [30], in which the mutant phenotypes obtained, a division of the young em- phenotype appears correlated with the inability to bryo along the longitudinal axis into an apical, perform a normal unequal division of the zygote, central and basal region was proposed [20, 22]. clearly shows that this mechanism is indeed of A second, radial pattern, superimposed on the crucial importance in plant embryogenesis. The apical-basal pattern and consisting of the vascu- second mechanism consists of the interaction be- lar, ground and epidermal tissues, appears to be tween an inducing cell or tissue and a responding established independently. cell or tissue brought about by specific signal mol- Somatic or asexual embryogenesis is the pro- ecules. Signal molecules that are produced out- cess by which somatic cells develop into plants side of a group of equivalent cells are defined as through the same characteristic morphological inducers [ 31 ]. Cellular communication between stages as their zygotic counterparts. For dicots adjacent cells can occur by cell-surface-located these are the globular, heart and torpedo stages. signal molecules able to act as inducers. Cells that The ability to form embryos that do not orignate are not in direct contact with an inducer- from a fertilized egg cell is quite widespread producing cell can be influenced if the signal mol- among plants. It may occur naturally as in Mal- ecule is diffusable, usually resulting in a concen- axis, where somatic embryos form spontanously tration gradient. Signal molecules are defined as on the leaf tips [23], or in the form of apomictic morphogens when the slope of their concentra- processes [24]. Under in vitro conditions somatic tion gradient provides reference points for the embryos can either form directly on the surface of formation of a pattern. The local concentration of an organized tissue such as a leaf or stem seg- the morphogen then determines the response of ment, from protoplasts or from microspores, or the cells. indirectly via an intermediary step of callus or Caenorhabditis elegans has served as an ex- suspension culture [25]. By virtue of their excel- ample for the existence of a series of segregating lent experimental accessibility, somatic embryo- cytoplasmic determinants that result in a rigid cell genesis is exploited to isolate plant-produced lineage as a means to generate patterns in the molecules that have promotive effects on the for- embryo and differentiated cells later on in devel- mation of somatic embryos [26]. Both somatic opment [32]. Recently described mutants pro- embryogenesis as well as in vitro cultured zygotic vide evidence that a number of maternally ex- embryos are being employed to try and answer pressed genes that encode nuclear proteins and long-standing questions concerning the role of cell surface proteins similar to the lin-12 family 'classical' plant growth regulators such as auxin are involved in cell-inductive processes [33]. in embryogenesis [27, 28]. In plant development cell position rather than developmental history is considered to be essen- tial for the formation of the somatic tissues [34- 37 ]. This implies that cell-inductive processes and [70] 1307 the use of signal molecules that act at short range exhibit a fused collar-like arrangement of their and over longer distances might be important in cotyledon primordia, as opposed to the normal the organization of the plant embryo. However, bilateral arrangement [27]. Application of the no direct evidence is available that cell-inductive polar auxin transport inhibitor to excised and in processes are indeed occurring in plants. A se- vitro cultured zygotic embryos of Brassica resulted quential and transient expression of a plasma in a similar fused-cotyledon phenotype as ob- membrane arabinogalactan protein (AGP) served for the pin-1 mutant [27], and in the Ara- epitope, recognized by the monoclonal antibody bidopsis gnom mutant [30]. These results are in- JIM8, was observed in reproductive tissues and terpreted to suggest that polar auxin transport the suspensor of an early globular embryo of determines the transition from radial to bilateral Brassica. Pennell et al. [38] speculated that the symmetry in the globular dicot embryo. The amp-I JIM8 epitope may be a marker for a cell-inductive mutant [42], exhibiting an elevated level of cyto- process in plants. Whether AGPs themselves act kinins, has a complex and pleiotropic phenotype as signal molecules in zygotic embryogenesis is affecting photomorphogenesis and flowering time, not known. There is however some evidence from as well as an increase in the number of tricot and somatic embryogenesis (see next section) that tetracot seedlings. Multiplication of cotelydons is particular AGPs may indeed have a direct bio- also observed in embryo mutants of the hauptling logical function in embryogenesis. If so, they will type [15, 20]. It appears therefore that interfer- be likely to act as short-range inducer molecules ence with the local balance between auxin and over a distance of a few cells only. A fascinating cytokinin primarily influences the formation of result was recently reported for Fucus [39] where, the proper number and orientation of cotyledon upon laser microsurgery
Recommended publications
  • Axis Formation in Plant Embryogenesis
    View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Cell, Vol. 81, 467-470, May 19, 1995, Copyright 0 1995 by Cell Press Axis Formation Minireview in Plant Embryogenesis: Cues and Clues Gerd Jiirgens focus on pattern formation in the embryo that establishes Lehrstuhl fur Entwicklungsgenetik the basic body organization of flowering plants. Universitat Ttibingen The Shoot Me&tern: Linking Up the Embryo D-72076 Tiibingen with the Flower Federal Republic of Germany Pattern formation in animals is largely confined to em- bryogenesis such that the future adult form is represented in the body organization of the mature embryo. By con- Imagine a textbook entitled Developmental Biology that trast, plant embryogenesis produces a juvenile form, the focuses entirely on plants, mentioning animals only for seedling, that lacks most structures of the adult plant. Em- their peculiar way of making germ cells by setting aside bryogenesis in essence organizes two groups of stem cells a group of precursor cells early in the embryo. The con- at the opposite ends of the body axis, the primary meri- verse has been, and still is, common practice. It is true stems of the shoot and the root. These meristems then that the regenerative potential of plants, which is indeed add new structures to the seedling, thus generating the impressive, sets them apart from the more familiar animal species-specific adult form during postembryonic devel- models: individual cells can give rise to embryos in culture; opment (Steeves and Sussex, 1989). Regardless of the localized groups of stem cells called meristems make the appearance of the adult plant, the shoot meristem is orga- adult plant in a seemingly autonomous fashion not only nized essentially the same way in different plant species.
    [Show full text]
  • Signaling in Plant Embryogenesis John J Harada
    23 Signaling in plant embryogenesis John J Harada Embryogenesis is a critical stage of the sporophytic life cycle heart-stage of embryogenesis, localized cell divisions gen- during which the basic body plan of the plant is established. erate the cotyledons, embryonic storage organs. Fifth, by Although positional information is implicated to play a major the torpedo-stage, both the shoot and root apical meristems role in determining embryo cell fate, little is known about the are visible as organized structures (Figure 1g). nature of positional signals. Recent studies show that the monopterous and hobbit mutations reveal signaling during Although progress has been made in establishing a frame- patterning of the embryonic axis. The LEAFY COTYLEDON1 work for understanding the mechanisms involved in and PICKLE genes have been implicated to play important embryo development, many questions remain. Little is roles in controlling embryo development. known about the molecular processes that induce embryo formation. The morphogenetic events that underlie forma- Addresses tion of the embryo also remain to be defined. Because cell Section of Plant Biology, Division of Biological Sciences, University of fate is largely determined by positional information in California, One Shields Avenue, Davis, CA 95616, USA; plants, signaling and intercellular communication play crit- e-mail: [email protected] ical roles in development [8,9]. In this article, I review Current Opinion in Plant Biology 1999, 2:23–27 primarily information published during the past year that provide examples of signaling during plant embryogenesis. http://biomednet.com/elecref/1369526600200023 Due to space limitations, this review will not be compre- © Elsevier Science Ltd ISSN 1369-5266 hensive but will focus on specific examples.
    [Show full text]
  • Different Roles of Auxins in Somatic Embryogenesis Efficiency In
    International Journal of Molecular Sciences Article Different Roles of Auxins in Somatic Embryogenesis Efficiency in Two Picea Species Teresa Hazubska-Przybył * , Ewelina Ratajczak , Agata Obarska and Emilia Pers-Kamczyc Institute of Dendrology, Polish Academy of Sciences, 62-035 Kórnik, Poland; [email protected] (E.R.); [email protected] (A.O.); [email protected] (E.P.-K.) * Correspondence: [email protected]; Tel.: +48-61-8170-033 Received: 3 April 2020; Accepted: 9 May 2020; Published: 11 May 2020 Abstract: The effects of auxins 2,4-D (2,4-dichlorophenoxyacetic acid), NAA (1-naphthaleneacetic acid) or picloram (4-amino-3,5,6-trichloropicolinic acid; 9 µM) and cytokinin BA (benzyloadenine; 4.5 µM) applied in the early stages of somatic embryogenesis (SE) on specific stages of SE in Picea abies and P. omorika were investigated. The highest SE initiation frequency was obtained after 2,4-D application in P. omorika (22.00%) and picloram application in P. abies (10.48%). NAA treatment significantly promoted embryogenic tissue (ET) proliferation in P. abies, while 2,4-D treatment reduced it. This reduction was related to the oxidative stress level, which was lower with the presence of NAA in the proliferation medium and higher with the presence of 2,4-D. The reduced oxidative stress level after NAA treatment suggests that hydrogen peroxide (H2O2) acts as a signalling molecule and promotes ET proliferation. NAA and picloram in the proliferation medium decreased the further production and maturation of P. omorika somatic embryos compared with that under 2,4-D. The quality of the germinated P.
    [Show full text]
  • Patterning During Embryo Development in Pinus
    Patterning During Embryo Development in Pinus With Special Emphasis on Somatic Embryogenesis in Scots pine (Pinus sylvestris L.) Malin Abrahamsson Faculty of Natural Resources and Agricultural Sciences Department of Plant Biology Uppsala Doctoral Thesis Swedish University of Agricultural Sciences Uppsala 2016 Acta Universitatis agriculturae Sueciae 2016:48 Cover: Scanning electron microscopy picture of a cotyledonary somatic embryo from cell line 12:12 ISSN 1652-6880 ISBN (print version) 978-91-576-8598-8 ISBN (electronic version) 978-91-576-8599-5 © 2016 Malin Abrahamsson, Uppsala Print: SLU Service/Repro, Uppsala 2016 Embryoutveckling hos släktet Pinus – med särskild tonvikt på somatisk embyoutveckling i tall (Pinus sylvestris L.) Sammanfattning Skogsindustrin har ett stort intresse av att kunna föröka ekonomiskt viktiga trädslag vegetativt, då det innebär stora fördelar i både förädlingsarbetet och för massförökning av det förädlade materialet. Somatisk embryogenes är en relativt ny metod för vegetativ förökning, där man från ett enda frö kan producera ett obegränsat antal genetiskt identiska plantor. Metoden innebär att somatiska celler stimuleras att utvecklas till embryogena celler som kan bilda embryon, så kallade somatiska embryon, som motsvarar fröembryon. Gran, men inte tall, kan förökas effektivt via somatiska embryon. Till skillnad från gran, så multipliceras fröembryot i tall på ett tidigt stadium genom delning. Embryona börjar tävla för sin överlevnad, och så småningom blir ett embryo dominant medan de resterande underordnade embryona succesivt bryts ner. Embryogena cellkulturer av tall kan endast etableras från omogna fröembryon, under en tvåveckorsperiod varje sommar, när multipliceringen av fröembryot sker. Embryogena cellkulturer av tall växer mycket snabbt, men det är svårt att stimulera utvecklingen och mognad av somatiska embryon.
    [Show full text]
  • K. Daigremontiana As a Model Plant for the Study of Auxin Effects In
    iochemis t B try n & la P P h f y o s l Benjamín Rodríguez-Garay et al., J Plant Biochem Physiol 2014, 2:1 i Journal of o a l n o r g u y DOI: 10.4172/2329-9029.1000e120 o J ISSN: 2329-9029 Plant Biochemistry & Physiology EditorialResearch Article OpenOpen Access Access Kalanchoë daigremontiana as a Model Plant for the Study of Auxin Effects in Plant Morphology José González-Hernández, José Manuel Rodríguez-Domínguez and Benjamín Rodríguez-Garay* Biotecnología Vegetal Centro de Investigación y Asistencia en Tecnología y Diseño del Estado de Jalisco, A.C. (CIATEJ), Av. Normalistas No. 800, Col. Colinas de la Normal, Guadalajara, Jalisco, México The ability to regenerate a plant from a single cell is known as totipotency, and such phenomenon occurs not only in in vitro tissue and cell culture but in specialized somatic cells that are part of whole plants in ex vitro natural conditions, constituting this asexual or vegetative processes their only means of reproduction [1]. A large number of studies have been conducted in order to understand the mechanisms by which shoots, plantlets and vegetative propagules are produced. According to the first studies reported by Yarbrough [2, 3], in the fern species Camptosorus rhizophyllus (which has two different kinds of leaves), shoots are produced at the tip of long acuminate leaves, while in the species Tolmiea menziesii shoots are originated in a notch near the junction of the petiole and the leaf blade; in both cases, the shoots are produced from meristematic tissue and once they are mature are naturally detached from the leaf and fall to the ground originating a new plant.
    [Show full text]
  • Ovule and Embryo Development, Apomixis and Fertilization Abdul M Chaudhury, Stuart Craig, ES Dennis and WJ Peacock
    26 Ovule and embryo development, apomixis and fertilization Abdul M Chaudhury, Stuart Craig, ES Dennis and WJ Peacock Genetic analyses, particularly in Arabidopsis, have led to Figure 1 the identi®cation of mutants that de®ne different steps of ovule ontogeny, pollen stigma interaction, pollen tube growth, and fertilization. Isolation of the genes de®ned by these Micropyle mutations promises to lead to a molecular understanding of (a) these processes. Mutants have also been obtained in which Synergid processes that are normally triggered by fertilization, such as endosperm formation and initiation of seed development, Egg cell occur without fertilization. These mutants may illuminate Polar Nuclei apomixis, a process of seed development without fertilization extant in many plants. Antipodal cells Chalazi Address Female Gametophyte CSIRO Plant Industry, GPO BOX 1600, ACT 2601, Australia; e-mail:[email protected] (b) (c) Current Opinion in Plant Biology 1998, 1:26±31 Pollen tube Funiculus http://biomednet.com/elecref/1369526600100026 Integument Zygote Fusion of Current Biology Ltd ISSN 1369-5266 egg and Primary sperm nuclei Endosperm Abbreviations cell ®s fertilization-independent seed Fused Polar ®e fertilization-independent endosperm Nuclei and Sperm Double Fertilization Introduction Ovules are critical in plant sexual reproduction. They (d) (e) contain a nucellus (the site of megasporogenesis), one or two integuments that develop into the seed coat and Globular a funiculus that connects the ovule to the ovary wall. embryo Embryo The nucellar megasporangium produces meiotic cells, one of which subsequently undergoes megagametogenesis to Endosperm produce the mature female gametophyte containing eight haploid nuclei [1] (Figure 1). One of these eight nuclei becomes the egg.
    [Show full text]
  • Development of the Embryo Proper and the Suspensor During Plant Embryogenesis‡
    Plant Biotechnology 22, 253–260 (2005) Review Development of the embryo proper and the suspensor during plant embryogenesis‡ Mikihisa Umeharaa*, Hiroshi Kamada Gene Research Center, University of Tsukuba, Ten-noudai 1-1-1, Tsukuba, Ibaraki 305-8572, Japan * E-mail: [email protected] Tel: ϩ81-92-924-2970 Fax: ϩ81-92-924-2981 Received June 3, 2005; accepted September 14, 2005 (Edited by M. Mii) Abstract Seed plant zygotes differentiate into two components, the embryo proper and the suspensor. Previous studies have led to the generally accepted view that development of the embryo proper is regulated by the suspensor connecting the embryo proper to donor tissue. However, biochemical, biological, and molecular analyses of embryogenesis are difficult, since zygotic embryos in higher plants are deeply embedded in mother tissues. To find a way out of the difficulties, some embryo-defective mutants of Arabidopsis have been used to discuss embryogenesis and suspensor function. On the other hand, somatic embryogenesis is widely used as a model system for studying the process of zygotic embryo formation. Because somatic embryo of gymnosperms has a well-developed suspensor, it has been successfully used to observe the suspensor directly and to identify factors modulating the interaction between the embryo proper and the suspensor. Various stimulatory and inhibitory factors are correlated with the interaction. Here, we review the results of studies employing Arabidopsis mutants and some gymnosperm tissue culture, and we discuss the possibility of using somatic embryogenesis as a new model for studies of suspensor biology. Key words: Embryogenesis, embryo proper, gymnosperm tissue culture, suspensor.
    [Show full text]
  • Secreted Molecules and Their Role in Embryo Formation in Plants : a Min-Review
    Secreted molecules and their role in embryo formation in plants : a min-review. Elisabeth Matthys-Rochon To cite this version: Elisabeth Matthys-Rochon. Secreted molecules and their role in embryo formation in plants : a min- review.. acta Biologica Cracoviensia, 2005, pp.23-29. hal-00188834 HAL Id: hal-00188834 https://hal.archives-ouvertes.fr/hal-00188834 Submitted on 31 May 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Copyright ACTA BIOLOGICA CRACOVIENSIA Series Botanica 47/1: 23–29, 2005 SECRETED MOLECULES AND THEIR ROLE IN EMBRYO FORMATION IN PLANTS: A MINI-REVIEW ELISABETH MATTHYS-ROCHON* Reproduction et développement des plantes (RDP), UMR 5667 CNRS/INRA/ENS/LYON1, 46 Allée d’Italie, 69364 Lyon Cedex 07, France Received January 15, 2005; revision accepted April 2, 2005 This short review emphasizes the importance of secreted molecules (peptides, proteins, arabinogalactan proteins, PR proteins, oligosaccharides) produced by cells and multicellular structures in culture media. Several of these molecules have also been identified in planta within the micro-environment in which the embryo and endosperm develop. Questions are raised about the parallel between in vitro systems (somatic and androgenetic) and in planta zygotic development.
    [Show full text]
  • Embryogenesis. Meristems
    BLGY1115 Plant cell & tissue biology Prof. Paul Knox [email protected] Books • BIOLOGY th Campbell et al., 10 Global edition, Pearson Publishers • Chapter 35 (p 816). Plant Structure & Growth Also Chapters 36-39 Plants………... major source of biomass on Earth ….. a source of food……….. …….. and drink! • Special features of plant growth & development • Embryogenesis. Meristems • Primary and secondary growth. Wood formation • Plant cell walls • Plant tissues and cell types • Plasticity and plant development Plants are complex multi-cellular organisms Distinctive features of plant development • Post-embryonic development • Plant cells do not migrate • Plant cells are totipotent & have developmental plasticity Post-embryonic development • The plant embryo has a simplified body plan • Most of the plant body is produced post- embryonically by the activity of meristems • Morphogenesis occurs continuously throughout the life of a plant • Plants can respond to the environment with changes in growth and development Development of a human embryo Late stage plant embryo future SAM future RAM SAM – shoot apical meristem RAM – root apical meristem Plant cells cannot migrate - because of the cell wall • The relative positions of cells in the plant body is always important • Cellular processes must be highly co-ordinated in both space and time • CELL DIVISION: timing and orientation • CELL EXPANSION: extent and direction • CELL DIFFERENTIATION: spatial relationships of cell types important The plant kingdom & plant diversity • The flowering plants (Angiosperms) are an extremely widespread, successful & diverse group of organsims • They are structurally the most complex plants & have evolved from structurally less complex plants • The table shows a summary of the major extant groups of the plant kingdom Division/Class # species Angiosperms Dicotyledons 300,000 Monocotyledons 65,000 Gymnosperms Seed Conifers 550 Cycads 100 Ginkgo 1 Vascular Ferns (Pteridophytes) 12,000 Horsetails & club mosses 1,000 Seedless Non- Mosses & liverworts 16,000 (Bryophytes) vasc.
    [Show full text]
  • History of the 19Th Century Cell Theory in the Light of Philip Kitcher's Theory of Unification
    HISTORY OF THE 19TH CENTURY CELL THEORY IN THE LIGHT OF PHILIP KITCHER'S THEORY OF UNIFICATION A THESIS SUBMITTED TO THE GRADUATE SCHOOL OF SOCIAL SCIENCES OF MIDDLE EAST TECHNICAL UNIVERSITY BY ŞAHİN ALP TAŞKAYA IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF MASTER OF ARTS IN THE DEPARTMENT OF PHILOSOPHY JANUARY 2013 Approval of the Graduate School of Social Sciences Prof. Dr. Meliha Altunışık Director I certify that this thesis satisfies all the requirements as a thesis for the degree of Master of Arts Prof. Dr. Ahmet İnam Head of Department This is to certify that we have read this thesis and that in our opinion it is fully adequate, in scope and quality, as a thesis for the degree of Master of Arts Assoc. Prof Samet Bağçe Supervisor Examining Committee Members Assoc. Prof. Barış Parkan (METU,PHIL) Assoc. Prof. Samet Bağçe (METU,PHIL) Assoc. Prof. Erdoğan Yıldırım (METU,SOC) PLAGIARISM I hereby declare that all information in this document has been obtained and presented in accordance with academic rules and ethical conduct. I also declare that, as required by these rules and conduct, I have fully cited and referenced all material and results that are not original to this work. Name, Last name : Signature : iii ABSTRACT HISTORY OF THE 19TH CENTURY CELL THEORY IN THE LIGHT OF PHILIP KITCHER'S THEORY OF UNIFICATION Taşkaya, Şahin Alp M.A., Graduate School of Social Sciences Supervisor: Assoc. Prof. Samet Bağçe January 2013, 47 pages In the turn of 19th century, Biology as a scientific discipline emerged; focused on every aspect of organisms, there was no consensus on the basic entity where the observed phenomena stemmed from.
    [Show full text]
  • Small Non-Coding Rnas at the Crossroads of Regulatory Pathways Controlling Somatic Embryogenesis in Seed Plants
    plants Review Small Non-Coding RNAs at the Crossroads of Regulatory Pathways Controlling Somatic Embryogenesis in Seed Plants Ana Alves 1,2 , Daniela Cordeiro 3, Sandra Correia 3 and Célia Miguel 1,4,* 1 BioISI—Biosystems & Integrative Sciences Institute, Faculty of Sciences, University of Lisboa, 1749-016 Lisboa, Portugal; [email protected] 2 Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, 2780-157 Oeiras, Portugal 3 Centre for Functional Ecology, Department of Life Sciences, University of Coimbra, Calçada Martim de Freitas, 3000-456 Coimbra, Portugal; [email protected] (D.C.); [email protected] (S.C.) 4 iBET, Instituto de Biologia Experimental e Tecnológica, Apartado 12, 2781-901 Oeiras, Portugal * Correspondence: [email protected] Abstract: Small non-coding RNAs (sncRNAs) are molecules with important regulatory functions during development and environmental responses across all groups of terrestrial plants. In seed plants, the development of a mature embryo from the zygote follows a synchronized cell division sequence, and growth and differentiation events regulated by highly regulated gene expression. However, given the distinct features of the initial stages of embryogenesis in gymnosperms and angiosperms, it is relevant to investigate to what extent such differences emerge from differential regulation mediated by sncRNAs. Within these, the microRNAs (miRNAs) are the best characterized class, and while many miRNAs are conserved and significantly represented across angiosperms and other seed plants during embryogenesis, some miRNA families are specific to some plant lineages. Citation: Alves, A.; Cordeiro, D.; Being a model to study zygotic embryogenesis and a relevant biotechnological tool, we systematized Correia, S.; Miguel, C.
    [Show full text]
  • Flowering Plant Embryos: How Did We End up Here?
    Plant Reproduction https://doi.org/10.1007/s00497-021-00427-y OPINION Flowering plant embryos: How did we end up here? Stefan A. Rensing1,2 · Dolf Weijers3 Received: 7 June 2021 / Accepted: 16 July 2021 © The Author(s) 2021 Abstract The seeds of fowering plants are sexually produced propagules that ensure dispersal and resilience of the next generation. Seeds harbor embryos, three dimensional structures that are often miniatures of the adult plant in terms of general structure and primordial organs. In addition, embryos contain the meristems that give rise to post-embryonically generated struc- tures. However common, fowering plant embryos are an evolutionary derived state. Flowering plants are part of a much larger group of embryo-bearing plants, aptly termed Embryophyta. A key question is what evolutionary trajectory led to the emergence of fowering plant embryos. In this opinion, we deconstruct the fowering plant embryo and describe the current state of knowledge of embryos in other plant lineages. While we are far yet from understanding the ancestral state of plant embryogenesis, we argue what current knowledge may suggest and how the knowledge gaps may be closed. Introduction In this opinion, we will deconstruct flowering plant embryogenesis into these innovations and drill down to the When asked the question “What is a plant embryo?”, one humble beginnings of plant embryogenesis. Insight into the may intuitively think of those that we meet in daily life: constituent steps in the evolution of plant embryogenesis the seeds of fowering plants. This is understandable, since not only gives a rich context for understanding the unique much of our diet is made from fowering plant seeds (think properties of plant embryos, but also ofers a framework for of beans, nuts or cereal grains).
    [Show full text]