The Chemical Armament of Reef-Building Corals: Inter
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Microbiomes of Gall-Inducing Copepod Crustaceans from the Corals Stylophora Pistillata (Scleractinia) and Gorgonia Ventalina
www.nature.com/scientificreports OPEN Microbiomes of gall-inducing copepod crustaceans from the corals Stylophora pistillata Received: 26 February 2018 Accepted: 18 July 2018 (Scleractinia) and Gorgonia Published: xx xx xxxx ventalina (Alcyonacea) Pavel V. Shelyakin1,2, Sofya K. Garushyants1,3, Mikhail A. Nikitin4, Sofya V. Mudrova5, Michael Berumen 5, Arjen G. C. L. Speksnijder6, Bert W. Hoeksema6, Diego Fontaneto7, Mikhail S. Gelfand1,3,4,8 & Viatcheslav N. Ivanenko 6,9 Corals harbor complex and diverse microbial communities that strongly impact host ftness and resistance to diseases, but these microbes themselves can be infuenced by stresses, like those caused by the presence of macroscopic symbionts. In addition to directly infuencing the host, symbionts may transmit pathogenic microbial communities. We analyzed two coral gall-forming copepod systems by using 16S rRNA gene metagenomic sequencing: (1) the sea fan Gorgonia ventalina with copepods of the genus Sphaerippe from the Caribbean and (2) the scleractinian coral Stylophora pistillata with copepods of the genus Spaniomolgus from the Saudi Arabian part of the Red Sea. We show that bacterial communities in these two systems were substantially diferent with Actinobacteria, Alphaproteobacteria, and Betaproteobacteria more prevalent in samples from Gorgonia ventalina, and Gammaproteobacteria in Stylophora pistillata. In Stylophora pistillata, normal coral microbiomes were enriched with the common coral symbiont Endozoicomonas and some unclassifed bacteria, while copepod and gall-tissue microbiomes were highly enriched with the family ME2 (Oceanospirillales) or Rhodobacteraceae. In Gorgonia ventalina, no bacterial group had signifcantly diferent prevalence in the normal coral tissues, copepods, and injured tissues. The total microbiome composition of polyps injured by copepods was diferent. -
Exploring Traits of Engineered Coral Entities to Be Employed in Reef Restoration
Journal of Marine Science and Engineering Article Exploring Traits of Engineered Coral Entities to be Employed in Reef Restoration Dor Shefy 1,2,3,*, Nadav Shashar 2 and Baruch Rinkevich 1 1 Israel Oceanography and Limnological Research, National Institute of Oceanography, Tel-Shikmona, P.O. Box 8030, Haifa 31080, Israel; [email protected] 2 Marine Biology and Biotechnology Program, Department of Life Sciences, Ben-Gurion University of the Negev Eilat Campus, Beer-Sheva 84105, Israel; [email protected] 3 The Interuniversity Institute for Marine Science, Eilat 88000, Israel * Correspondence: [email protected] Received: 18 November 2020; Accepted: 13 December 2020; Published: 21 December 2020 Abstract: Aggregated settlement of coral larvae results in a complex array of compatible (chimerism) and incompatible (rejection) allogenic responses. Each chimeric assemblage is considered as a distinct biological entity, subjected to selection, however, the literature lacks the evolutionary and ecological functions assigned to these units of selection. Here, we examined the effects of creating chimera/rejecting partners in terms of growth and survival under prolonged field conditions. Bi/multichimeras, bi/multi-rejecting entities, and genetically homogenous colonies (GHC) of the coral Stylophora pistillata were monitored under prolonged field conditions in a mid-water floating nursery in the northern Red Sea. Results revealed an increased aerial size and aeroxial ecological volume for rejected and chimeric entities compared to GHCs. At age 18 months, there were no significant differences in these parameters among the entities and traits, and rejecting partners did not differ from GHC. However, survival probabilities were significantly higher for chimeras that further revealed disparate initiation of up-growing branches and high diversity of chimeric phenotypes. -
Taxonomy and Phylogenetic Relationships of the Coral Genera Australomussa and Parascolymia (Scleractinia, Lobophylliidae)
Contributions to Zoology, 83 (3) 195-215 (2014) Taxonomy and phylogenetic relationships of the coral genera Australomussa and Parascolymia (Scleractinia, Lobophylliidae) Roberto Arrigoni1, 7, Zoe T. Richards2, Chaolun Allen Chen3, 4, Andrew H. Baird5, Francesca Benzoni1, 6 1 Dept. of Biotechnology and Biosciences, University of Milano-Bicocca, 20126, Milan, Italy 2 Aquatic Zoology, Western Australian Museum, 49 Kew Street, Welshpool, WA 6106, Australia 3Biodiversity Research Centre, Academia Sinica, Nangang, Taipei 115, Taiwan 4 Institute of Oceanography, National Taiwan University, Taipei 106, Taiwan 5 ARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811, Australia 6 Institut de Recherche pour le Développement, UMR227 Coreus2, 101 Promenade Roger Laroque, BP A5, 98848 Noumea Cedex, New Caledonia 7 E-mail: [email protected] Key words: COI, evolution, histone H3, Lobophyllia, Pacific Ocean, rDNA, Symphyllia, systematics, taxonomic revision Abstract Molecular phylogeny of P. rowleyensis and P. vitiensis . 209 Utility of the examined molecular markers ....................... 209 Novel micromorphological characters in combination with mo- Acknowledgements ...................................................................... 210 lecular studies have led to an extensive revision of the taxonomy References ...................................................................................... 210 and systematics of scleractinian corals. In the present work, we Appendix ....................................................................................... -
The Reproduction of the Red Sea Coral Stylophora Pistillata
MARINE ECOLOGY PROGRESS SERIES Vol. 1, 133-144, 1979 - Published September 30 Mar. Ecol. Prog. Ser. The Reproduction of the Red Sea Coral Stylophora pistillata. I. Gonads and Planulae B. Rinkevich and Y.Loya Department of Zoology. The George S. Wise Center for Life Sciences, Tel Aviv University. Tel Aviv. Israel ABSTRACT: The reproduction of Stylophora pistillata, one of the most abundant coral species in the Gulf of Eilat, Red Sea, was studied over more than two years. Gonads were regularly examined using histological sections and the planula-larvae were collected in situ with plankton nets. S. pistillata is an hermaphroditic species. Ovaries and testes are situated in the same polyp, scattered between and beneath the septa and attached to them by stalks. Egg development starts in July preceding the spermaria, which start to develop only in October. A description is given on the male and female gonads, their structure and developmental processes. During oogenesis most of the oocytes are absorbed and usually only one oocyte remains in each gonad. S. pistillata broods its eggs to the planula stage. Planulae are shed after sunset and during the night. After spawning, the planula swims actively and changes its shape frequently. A mature planula larva of S. pistillata has 6 pairs of complete mesenteries (Halcampoides stage). However, a wide variability in developmental stages exists in newly shed planulae. The oral pole of the planula shows green fluorescence. Unique organs ('filaments' and 'nodules') are found on the surface of the planula; -
Molecular Diversity, Phylogeny, and Biogeographic Patterns of Crustacean Copepods Associated with Scleractinian Corals of the Indo-Pacific
Molecular Diversity, Phylogeny, and Biogeographic Patterns of Crustacean Copepods Associated with Scleractinian Corals of the Indo-Pacific Dissertation by Sofya Mudrova In Partial Fulfillment of the Requirements For the Degree of Doctor of Philosophy of Science King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia November, 2018 2 EXAMINATION COMMITTEE PAGE The dissertation of Sofya Mudrova is approved by the examination committee. Committee Chairperson: Dr. Michael Lee Berumen Committee Co-Chair: Dr. Viatcheslav Ivanenko Committee Members: Dr. James Davis Reimer, Dr. Takashi Gojobori, Dr. Manuel Aranda Lastra 3 COPYRIGHT PAGE © November, 2018 Sofya Mudrova All rights reserved 4 ABSTRACT Molecular diversity, phylogeny and biogeographic patterns of crustacean copepods associated with scleractinian corals of the Indo-Pacific Sofya Mudrova Biodiversity of coral reefs is higher than in any other marine ecosystem, and significant research has focused on studying coral taxonomy, physiology, ecology, and coral-associated fauna. Yet little is known about symbiotic copepods, abundant and numerous microscopic crustaceans inhabiting almost every living coral colony. In this thesis, I investigate the genetic diversity of different groups of copepods associated with reef-building corals in distinct parts of the Indo-Pacific; determine species boundaries; and reveal patterns of biogeography, endemism, and host-specificity in these symbiotic systems. A non-destructive method of DNA extraction allowed me to use an integrated approach to conduct a diversity assessment of different groups of copepods and to determine species boundaries using molecular and taxonomical methods. Overall, for this thesis, I processed and analyzed 1850 copepod specimens, representing 269 MOTUs collected from 125 colonies of 43 species of scleractinian corals from 11 locations in the Indo-Pacific. -
Cnidarian Immunity and the Repertoire of Defense Mechanisms in Anthozoans
biology Review Cnidarian Immunity and the Repertoire of Defense Mechanisms in Anthozoans Maria Giovanna Parisi 1,* , Daniela Parrinello 1, Loredana Stabili 2 and Matteo Cammarata 1,* 1 Department of Earth and Marine Sciences, University of Palermo, 90128 Palermo, Italy; [email protected] 2 Department of Biological and Environmental Sciences and Technologies, University of Salento, 73100 Lecce, Italy; [email protected] * Correspondence: [email protected] (M.G.P.); [email protected] (M.C.) Received: 10 August 2020; Accepted: 4 September 2020; Published: 11 September 2020 Abstract: Anthozoa is the most specious class of the phylum Cnidaria that is phylogenetically basal within the Metazoa. It is an interesting group for studying the evolution of mutualisms and immunity, for despite their morphological simplicity, Anthozoans are unexpectedly immunologically complex, with large genomes and gene families similar to those of the Bilateria. Evidence indicates that the Anthozoan innate immune system is not only involved in the disruption of harmful microorganisms, but is also crucial in structuring tissue-associated microbial communities that are essential components of the cnidarian holobiont and useful to the animal’s health for several functions including metabolism, immune defense, development, and behavior. Here, we report on the current state of the art of Anthozoan immunity. Like other invertebrates, Anthozoans possess immune mechanisms based on self/non-self-recognition. Although lacking adaptive immunity, they use a diverse repertoire of immune receptor signaling pathways (PRRs) to recognize a broad array of conserved microorganism-associated molecular patterns (MAMP). The intracellular signaling cascades lead to gene transcription up to endpoints of release of molecules that kill the pathogens, defend the self by maintaining homeostasis, and modulate the wound repair process. -
Sexual Reproduction in the Caribbean Coral Genus Isophyllia (Scleractinia: Mussidae)
Sexual reproduction in the Caribbean coral genus Isophyllia (Scleractinia: Mussidae) Derek Soto and Ernesto Weil Department of Marine Science, Universidad de Puerto Rico, Recinto de Mayagu¨ez, Mayagu¨ez, Puerto Rico, United States ABSTRACT The sexual pattern, reproductive mode, and timing of reproduction of Isophyllia sinuosa and Isophyllia rigida, two Caribbean Mussids, were assessed by histological analysis of specimens collected monthly during 2000–2001. Both species are simultaneous hermaphroditic brooders characterized by a single annual gametogenetic cycle. Spermatocytes and oocytes of different stages were found to develop within the same mesentery indicating sequential maturation for extended planulation. Oogenesis took place during May through April in I. sinuosa and from August through June in I. rigida. Oocytes began development 7–8 months prior to spermaries but both sexes matured simultaneously. Zooxanthellate planulae were observed in I. sinuosa during April and in I. rigida from June through September. Higher polyp and mesenterial fecundity were found in I. rigida compared to I. sinuosa. Larger oocyte sizes were found in I. sinuosa than in I. rigida, however larger planula sizes were found in I. rigida. Hermaphroditism is the exclusive sexual pattern within the Mussidae while brooding has been documented within the related genera Mussa, Scolymia and Mycetophyllia. This study represents the first description of the sexual characteristics of I. rigida and provides an updated description of I. sinuosa. Subjects Developmental Biology, Marine Biology, Zoology Keywords Caribbean, Mussidae, Coral reproduction, Hermaphroditic, Brooder Submitted 5 October 2015 INTRODUCTION Accepted 7 October 2016 Published 10 November 2016 Reproduction in corals consists of a sequence of events which include: gametogenesis, Corresponding author spawning (broadcasters), fertilization, embryogenesis, planulation (brooders), dispersal, Derek Soto, [email protected] settlement and recruitment (Harrison & Wallace, 1990). -
The Ecological Significance of Giant Clams in Coral Reef Ecosystems
Biological Conservation 181 (2015) 111–123 Contents lists available at ScienceDirect Biological Conservation journal homepage: www.elsevier.com/locate/biocon Review The ecological significance of giant clams in coral reef ecosystems ⇑ Mei Lin Neo a,b, William Eckman a, Kareen Vicentuan a,b, Serena L.-M. Teo b, Peter A. Todd a, a Experimental Marine Ecology Laboratory, Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore b Tropical Marine Science Institute, National University of Singapore, 18 Kent Ridge Road, Singapore 119227, Singapore article info abstract Article history: Giant clams (Hippopus and Tridacna species) are thought to play various ecological roles in coral reef Received 14 May 2014 ecosystems, but most of these have not previously been quantified. Using data from the literature and Received in revised form 29 October 2014 our own studies we elucidate the ecological functions of giant clams. We show how their tissues are food Accepted 2 November 2014 for a wide array of predators and scavengers, while their discharges of live zooxanthellae, faeces, and Available online 5 December 2014 gametes are eaten by opportunistic feeders. The shells of giant clams provide substrate for colonization by epibionts, while commensal and ectoparasitic organisms live within their mantle cavities. Giant clams Keywords: increase the topographic heterogeneity of the reef, act as reservoirs of zooxanthellae (Symbiodinium spp.), Carbonate budgets and also potentially counteract eutrophication via water filtering. Finally, dense populations of giant Conservation Epibiota clams produce large quantities of calcium carbonate shell material that are eventually incorporated into Eutrophication the reef framework. Unfortunately, giant clams are under great pressure from overfishing and extirpa- Giant clams tions are likely to be detrimental to coral reefs. -
The Productivity of Corals - A.E
OCEANOGRAPHY – Vol.II - The Productivity of Corals - A.E. Douglas THE PRODUCTIVITY OF CORALS A.E. Douglas University of York, York, UK Keywords: coral, zooxanthellae, irradiance, temperature effects, coral bleaching, photosynthate release, symbiosis Contents 1. Introduction 2. Zooxanthellae: The primary producers in corals 3. Factors influencing the rates of photosynthesis by zooxanthellae 3.1. Irradiance 3.2. Temperature 3.3. Nutrients 4. The fate of zooxanthella primary production 4.1. At the Scale of the Coral Colony 4.2. At the Scale of the Reef 5. Conclusions: Zooxanthella Productivity and Reef Exploitation Glossary Bibliography Biographical Sketch Summary The symbiosis between corals and dinoflagellate algae of the genus Symbiodinium (“zooxanthellae”) underpins coral reefs, which are among the most productive ecosystems in the world. Their productivity is critically dependent on the illumination and temperature conditions. Corals live within a few degrees of their upper thermal limit, and elevated sea temperatures, often exacerbated by high solar radiation, damage the photosynthetic apparatus of the zooxanthellae and trigger bleaching. Much of the zooxanthella primary production is transferred directly to the coral tissues, where it is respired, stored or released into the surrounding water column as dissolved and particulate organic material. Overall, the excess production from the reef accounts, on average, for just 3% of the total primary production, and less than 1% of the total productionUNESCO is available in a form (e.g. inve –rtebrates, EOLSS fish) that can be harvested. 1. IntroductionSAMPLE CHAPTERS Shallow water corals reefs are among the most productive ecosystems of the world, with -2 -1 -2 -1 gross primary productivity of 1-15 g C m day (ca. -
Conservation of Reef Corals in the South China Sea Based on Species and Evolutionary Diversity
Biodivers Conserv DOI 10.1007/s10531-016-1052-7 ORIGINAL PAPER Conservation of reef corals in the South China Sea based on species and evolutionary diversity 1 2 3 Danwei Huang • Bert W. Hoeksema • Yang Amri Affendi • 4 5,6 7,8 Put O. Ang • Chaolun A. Chen • Hui Huang • 9 10 David J. W. Lane • Wilfredo Y. Licuanan • 11 12 13 Ouk Vibol • Si Tuan Vo • Thamasak Yeemin • Loke Ming Chou1 Received: 7 August 2015 / Revised: 18 January 2016 / Accepted: 21 January 2016 Ó Springer Science+Business Media Dordrecht 2016 Abstract The South China Sea in the Central Indo-Pacific is a large semi-enclosed marine region that supports an extraordinary diversity of coral reef organisms (including stony corals), which varies spatially across the region. While one-third of the world’s reef corals are known to face heightened extinction risk from global climate and local impacts, prospects for the coral fauna in the South China Sea region amidst these threats remain poorly understood. In this study, we analyse coral species richness, rarity, and phylogenetic Communicated by Dirk Sven Schmeller. Electronic supplementary material The online version of this article (doi:10.1007/s10531-016-1052-7) contains supplementary material, which is available to authorized users. & Danwei Huang [email protected] 1 Department of Biological Sciences and Tropical Marine Science Institute, National University of Singapore, Singapore 117543, Singapore 2 Naturalis Biodiversity Center, PO Box 9517, 2300 RA Leiden, The Netherlands 3 Institute of Biological Sciences, Faculty of -
St. Eustatius GCRMN 2017 Report (PDF)
ST. EUSTATIUS Prepared by: FINAL REPORT Kimani Kitson-Walters PhD (pending) Data Monitoring Officer 2017 Ministry of Agriculture, Nature and Food Quality /Caribbean Netherlands Science Institute L. E. Saddlerweg No 5 Oranjestad St. Eustatius, Caribbean Netherlands Email: [email protected] Table of Contents List of Figures .......................................................................................................................................... 2 List of Tables ........................................................................................................................................... 2 SUMMARY ............................................................................................................................................... 3 1. INTRODUCTION ................................................................................................................................... 3 2. METHODS ............................................................................................................................................ 3 2.1 Abundance and biomass of reef fish taxa ..................................................................................... 4 2.2 Relative cover of reef-building organisms (corals) and their dominant competitors .................. 4 2.3 Health assessment of reef-building corals .................................................................................... 5 2.4 Recruitment of reef-building corals ............................................................................................. -
Calculating the Contribution of Zooxanthellae to Giant Clams Respiration Energy Requirements
Journal of Coastal Development ISSN: 1410-5217 Volume 5, Number 3, June 2002 : 101-110 Accredited: 69/Dikti/Kep/2000 Review CALCULATING THE CONTRIBUTION OF ZOOXANTHELLAE TO GIANT CLAMS RESPIRATION ENERGY REQUIREMENTS Ambariyanto*) Marine Science Department, Faculty of Fisheries and Marine Sciences, Diponegoro University, Semarang Indonesia. Email: [email protected] Received: April 24, 2002 ; Accepted: May 27, 2002 ABSTRACT Giant clams (Tridacnidae) are known to live in association with photosynthetic single cell dinoflagellate algae commonly called zooxanthellae. These algae which can be found in the mantle of the clams are capable of transferring part of their photosynthates which become an important source of energy to the host ( apart from filter feeding activity). In order to understand the basic biological processes of the giant clams , the contribution of zooxanthellae to the clam’s energy requirement need to be determined. This review describes how to calculate the contribution of zooxanthellae to the giant clam’s energy requirement for the respiration process. Key words: Giant clams, tridacnidae, zooxanthellae CZAR *) Correspondence: Tel. 024-7474698, Fax. 024-7474698, Email: [email protected] INTRODUCTION One of the important aspects of the biology of giant clams is the existence Giant clams (Family: Tridacnidae) are of zooxanthellae which occupy the mantle large bivalves that are commonly found in of the clams as endosymbiotic coral reef habitats especially in the Indo- dinoflagellate algae (Lucas, 1988). These Pacific region. This family consists of two zooxanthellae have a significant role, genera (Tridacna and Hippopus) and eight especially in the energy requirements of species: Tridacna gigas, T. derasa, T. giant clams, since they are capable of squamosa, T.