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B Chromosomes, Ribosomal Genes and Telomeric Sequences
Genetica DOI 10.1007/s10709-012-9691-4 Comparative cytogenetics in four species of Palinuridae: B chromosomes, ribosomal genes and telomeric sequences Susanna Salvadori • Elisabetta Coluccia • Federica Deidda • Angelo Cau • Rita Cannas • Anna Maria Deiana Received: 18 May 2012 / Accepted: 20 November 2012 Ó Springer Science+Business Media Dordrecht 2012 Abstract The evolutionary pathway of Palinuridae Introduction (Crustacea, Decapoda) is still controversial, uncertain and unexplored, expecially from a karyological point of view. Scyllaridae and Palinuridae constitute the Achelata group, Here we describe the South African spiny lobster Jasus considered to be monophyletic and the Palinuridae now lalandii karyotype: n and 2n values, heterochromatin dis- includes the Sinaxidae family (Patek et al. 2006; George tribution, nucleolar organizer region (NOR) location and 2006; Groeneweld et al. 2007; Palero et al. 2009a; Tsang telomeric repeat structure and location. To compare the et al. 2009). genomic and chromosomal organization in Palinuridae we Fossil records from North America, Europe and Aus- located NORs in Panulirus regius, Palinurus gilchristi and tralia suggest that the Palinuridae arose in the early Palinurus mauritanicus: all species showed multiple Mesozoic (George 2006). The family currently comprises NORs. In J. lalandii NORs were located on three chro- approximately ten genera and fifty species (including those mosome pairs, with interindividual polymorphism. In of the Synaxidae), which can be subdivided into two P. regius andinthetwoPalinurus species NORs were located groups: the Stridentes, and the Silentes. This family has on two chromosome pairs. In the two last species 45S received much attention and there are data on comparative ribosomal gene loci were also found on B chromosomes. -
Calanus Helgolandicus Under Controlled Conditions
Helgol~inder wiss. Meeresunters. 20, 346-359 (1970) Cultivation of Calanus helgolandicus under controlled conditions G.-A. PAFFENH6FER Institute of Marine Resources, University of California, San Diego; La Jolla, California, USA KURZFASSUNG: Kultlvierung von Calanus helgolandicus unter kontrollierten Bedingungen. Der planktonische Copepode Calanus helgolandicus (Calanoida) wurde im Labor vom Ei bis zum Adultus in bewegten Kulturen bei 15.0 C aufgezogen. Die kettenbildenden Diatomeen Chaetoceros curvisetus, Skeletonema costatum und Lauderia borealis sowie der Dinoflagellat Gymnodinium splendens wurden als Nahrung angeboten. Die Nahrungskonzentrationen, die zum Tell den Phytoplanktonkonzentrationen im Pazifischen Ozean an der Ktiste Siidkalifor- niens entsprachen, lagen zwischen 28 ~g und 800 #g organischem C/I. In Abh~ingigkeit yon Nahrungsquallt~it und Nahrungskonzentration wurden folgende Ergebnisse erzielt: Die Mor- talit~it yon C. heIgolandicus w~.hrend der gesamten Entwicklung vom geschliipf~en Naupllus bis zum Adultus lag zwischen 2,3 °/0 und 58,2 o/0. Die Zeitspanne yore Schliipfen bis zum adul- ten Stadium wiihrte i8 bis 54 Tage. Das Geschlechterverh~imis in verschiedenen KuIturen im Labor aufgezogener Tiere schwankte erhebli&. Der h6chste Prozentsatz yon ~ (~ (ca. 25 %) wurde erhalten, als L. boreal# beziehungswelse G. splendens gef~ittert wurden. Die L~.nge der ~ stand in direktem Verh~ilmis zur angebotenen Nahrungsmenge und lag zwischen 3,03 mm und 3,84 ram. Im Labor aufgezogene mad befruchtete ~ legten durchschnittlich 1991 Eier pro ~ bei einer Schlilpfrate yon 84 °/0. Spermatophorentragende ~ aus dem Pazifischen Ozean legten durchschnittllch je 2267 Eier, die eine Schltipfrate yon 77 % aufwiesen. Die Er- gebnisse beweisen, dab es m/Sglich ist, Calanus helgolandicus ohne Schwierlgkeit im Labor auf- zuziehen. -
Global Marine Ecological Status Report No
Global Marine Ecological Status Report no. 11 Based on observations from the global ocean Continuous Plankton Recorder surveys Global Alliance of Continuous Plankton Recorder Surveys (GACS) Global Marine Ecological Status Report Based on observations from the global ocean Continuous Plankton Recorder surveys Citation: Edwards, M., Helaouet, P., Alhaija, R.A., Batten, S., Beaugrand, G., Chiba, S., Horaeb, R.R., Hosie, G., Mcquatters-Gollop, A., Ostle, C., Richardson, A.J., Rochester, W., Skinner, J., Stern, R., Takahashi, K., Taylor, C., Verheye, H.M., & Wootton, M. 2016. Global Marine Ecological Status Report: results from the global CPR Survey 2014/2015. SAHFOS Technical Report, 11: 1-32. Plymouth, U.K. ISSN 1744-0750 Published by: Sir Alister Hardy Foundation for Ocean Science ©SAHFOS 2016 ISSN No: ISSN 1744-0750 Contents 2....................................................................Introduction Summary for policy makers 8....................................................................Global CPR observations North Atlantic and Arctic Southern Ocean Northeast Pacific Northwest Pacific South Atlantic and the Benguela Current Eastern Mediterranean Sea Indian Ocean and Australian waters 20...................................................................Applied ecological indicators Climate change Biodiversity Ecosystem health Ocean acidification 30....................................................................Bibliography Introduction The Global Alliance of Continuous Plankton Recorders, known as GACS, brings together the -
From Thailand
Zootaxa 3852 (3): 359–372 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2014 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3852.3.5 http://zoobank.org/urn:lsid:zoobank.org:pub:D6781858-B9E0-4C78-A46D-971F59D56822 Description of four new species of the genus Ptilocerembia Friederichs, 1923 (Embioptera: Ptilocerembiidae) from Thailand PISIT POOLPRASERT1 & JANICE S. EDGERLY2,3 1Faculty of Science and Technology, Pibulsongkram Rajabhat University, Phitsanulok, 65000, Thailand. E-mail: [email protected] 2Department of Biology, Santa Clara University, Santa Clara, 95053, CA, U.S.A. E-mail: [email protected] 3Corresponding author Abstract Four new species of webspinners in the genus Ptilocerembia Friederichs (Ptilocerembiidae) are described including Ptilocerembia thaidina sp. n., P. senathami sp. n., P. catherinae sp. n. and P. rossi sp. n. from Thailand. Illustrations of heads, genitalia and papilla of adult males, sternite pattern of adult females together with photographs of adult males, females and their galleries for each species are provided. Notes on field observations and egg mass structure are given for P. catherinae sp. n. A distribution map and a dichotomous key to the Thai species in the genus Ptilocerembia are also included. Key words: Embiidina, Embiodea, taxonomy, Thailand, webspinner Introduction The webspinner family Ptilocerembiidae Miller and Edgerly, 2012 consists of only one Southeast Asian genus known to date, Ptilocerembia Friederichs, 1923, which was erected based on a single species from Indonesia (Ptilocerembia roepkei Friederichs, 1923). Nevertheless, the genus probably occurs throughout Thailand as well as in eastern Myanmar (Ross, 1963). -
A Systematic Revision of the Asterinid Genus Aquilonastra O'loughlin
Memoirs of Museum Victoria 63(2): 257–287 (2006) ISSN 1447-2546 (Print) 1447-2554 (On-line) http://www.museum.vic.gov.au/memoirs/index.asp A systematic revision of the asterinid genus Aquilonastra OʼLoughlin, 2004 (Echinodermata: Asteroidea) P. M ARK OʼLOUGHLIN1 AND FRANCIS W.E. ROWE2 1Honorary Associate, Marine Biology Section, Museum Victoria, GPO Box 666, Melbourne, Vic. 3001, Australia ([email protected]) 2Research Associate, Australian Museum, Sydney, NSW, Australia ([email protected]). Private address: Beechcroft, Norwich Road, Scole, Diss, Norfolk, IP21 4DY, U.K. Abstract OʼLoughlin, P. Mark and Rowe, Francis W.E. A systematic revision of the asterinid genus Aquilonastra OʼLoughlin, 2004 (Echinodermata: Asteroidea). Memoirs of Museum Victoria 63(2): 257–287. The Indo-west Pacifi c Aquilonastra OʼLoughlin is reviewed. Eleven species are retained in Aquilonastra: A. anomala (H.L. Clark); A. batheri (Goto); A. burtonii (Gray); A. cepheus (Müller and Troschel); A. corallicola (Marsh); A. coronata (Martens); A. iranica (Mortensen); A. limboonkengi (Smith); A. minor (Hayashi); A. rosea (H.L. Clark); A. scobinata (Livingstone). Asterina lorioli Koehler is reassigned to Aquilonastra. Thirteen new species are described: A. byrneae; A. colemani; A. conandae; A. doranae; A. halseyae; A. marshae; A. moosleitneri; A. oharai; A. richmondi; A. rowleyi; A. samyni; A. watersi; A. yairi. The four subspecies of Asterina coronata Martens are junior synonyms: Asterina coronata cristata Fisher; Asterina coronata euerces Fisher; Asterina coronata fascicularis Fisher; Asterina coronata forma japonica Hayashi. The 13 fi ssiparous Red Sea specimens described by Perrier as Asteriscus wega are the syntypes. Asteriscus wega Perrier is a junior synonym of Asterina burtonii Gray. -
Palinurus Elephas) from the Southwest Coast of Portugal
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Sapientia JOURNAL OF CRUSTACEAN BIOLOGY, 26(4): 601–609, 2006 ASPECTS OF THE BIOLOGY AND FISHERY OF THE EUROPEAN SPINY LOBSTER (PALINURUS ELEPHAS) FROM THE SOUTHWEST COAST OF PORTUGAL Ame´lia Cristina Galhardo, Paula Serafim, and Margarida Castro Centre of Marine Sciences (CCMAR), Universidade do Algarve, Gambelas, 8005-139 Faro, Portugal Downloaded from https://academic.oup.com/jcb/article-abstract/26/4/601/2664327 by B-On Consortium Portugal user on 27 May 2019 (corresponding author (MC) [email protected]) ABSTRACT The biology and fishery of the lobster, Palinurus elephas from the SW coast of Portugal was studied during two distinct periods 10 years apart in 1993-1994 (March 93 to March 94) and during 2003 (May to July). The landings at the port of Sagres, representing half of the catch of the country for this species, were sampled twice a week. The ovigerous season extends from September to March, with an individual incubation period of five months. Considering the ovigerous condition as an indicator of maturity in females, 50% of the females were mature at carapace length of 110 mm. Females below this size represent 95% of the population and account for 41% of the egg production. Females above 50% maturity, representing only 5% of the population, provide 59% of the eggs, showing the importance of larger individuals in the reproduction of this species. Most biological parameters estimated are within the range of values reported for this species in other areas with the exception that in our study the total length was smaller in relation to carapace length, so that females of a given carapace length carried fewer eggs. -
Rocky Shore Guide
Welcome to The Seashore Code Help protect Devon’s special coastline by Wembury following the Seashore Code every time you go rockpooling. Right way up! Enjoy looking under rocks but always replace them carefully, just how you found them. Devon Wildlife Trust’s One at a time Guide to common seaweeds Always put seawater in your Wembury in South Devon is a magnet for wildlife bucket first and no more than one – its rocky cliffs are home to nesting seabirds and and rocky shore species creature at a time. the rocky shore, slate reefs and massive wave-cut platforms provide one of the United Kingdom’s best No nets! spots for marine life. Wembury and the surrounding Be gentle catching animals in coastline form a Marine Conservation Area (MCA), a rockpools – use your hands, not Special Area of Conservation (SAC), a Site of Special nets. Scientific Interest (SSSI) and form part of the South Devon Area of Outstanding Natural Beauty (AONB). Put me back These go some way to shielding it from human Many animals have special homes pressures. so always return them to where they were found. Managed by Devon Wildlife Trust, Wembury Marine Centre is the ideal place to learn about the Watch your step! surrounding marine environment and its wildlife Take care not to damage seashore through regular rockpool and snorkel safaris, school creatures underfoot or by pulling visits and other marine-themed events. The Centre them off rocks. also explains the part you can play in protecting your local marine environment, following The Wildlife Be safe; be kind Trusts’ Living Seas strategy. -
1 3 6-Mer Hemocyanin from Cryoem and Amino Acid Sequence
doi:10.1016/S0022-2836(02)01173-7 J. Mol. Biol. (2003) 325, 99–109 Quaternary Structure of the European Spiny Lobster (Palinurus elephas )13 6-mer Hemocyanin from cryoEM and Amino Acid Sequence Data Ulrich Meissner1*, Michael Stohr1, Kristina Kusche1 Thorsten Burmester1, Holger Stark2, J. Robin Harris1, Elena V. Orlova3 and Ju¨ rgen Markl1 1Institute of Zoology Arthropod hemocyanins are large respiratory proteins that are composed University of Mainz of up to 48 subunits (8 £ 6-mer) in the 75 kDa range. A 3D reconstruction Muellerweg 6, D-55099 Mainz of the 1 £ 6-mer hemocyanin from the European spiny lobster Palinurus Germany elephas has been performed from 9970 single particles using cryoelectron microscopy. An 8 A˚ resolution of the hemocyanin 3D reconstruction 2MPI for Biophysical Chemistry has been obtained from about 600 final class averages. Visualisation of Am Fassberg 11, D-37077 structural elements such as a-helices has been achieved. An amino acid Go¨ttingen, Germany sequence alignment shows the high sequence identity (.80%) of the 3Department of hemocyanin subunits from the European spiny lobster P. elephas and the Crystallography, Birkbeck American spiny lobster Panulirus interruptus. Comparison of the P. elephas College, University of London hemocyanin electron microscopy (EM) density map with the known Malet Street, London WC1E P. interruptus X-ray structure shows a close structural correlation, demon- 7HX, UK strating the reliability of both methods for reconstructing proteins. By molecular modelling, we have found the putative locations for the amino acid sequence (597–605) and the C-terminal end (654–657), which are absent in the available P. -
The Advantages of the Pentameral Symmetry of the Starfish
The advantages of the pentameral symmetry of the starfish Liang Wua1, Chengcheng Jia1, Sishuo Wanga, and Jianhao Lvb a College of Biological Sciences, China Agricultural University, Beijing, 100094, China b College of Science, China Agricultural University, Beijing, 100094, China 1 Joint first authors. Corresponding author Liang Wu College of Biological Sciences, China Agricultural University, Beijing, 100094, China Tel: +86-10-62731071/+86-13581827546 Fax: +86-10-62731332 E-mail: [email protected] Chengcheng Ji E-mail: [email protected] Sishuo Wang E-mail: [email protected] Jianhao Lv E-mail: [email protected] Abstract Starfish typically show pentameral symmetry, and they are typically similar in shape to a pentagram. Although starfish can evolve and live with other numbers of arms, the dominant species always show pentameral symmetry. We used mathematical and physical methods to analyze the superiority of starfish with five arms in comparison with those with a different number of arms with respect to detection, turning over, autotomy and adherence. In this study, we determined that starfish with five arms, although slightly inferior to others in one or two aspects, exhibit the best performance when the four aforementioned factors are considered together. In addition, five-armed starfish perform best on autotomy, which is crucially important for starfish survival. This superiority contributes to the dominance of five-armed starfish in evolution, which is consistent with the practical situation. Nevertheless, we can see some flexibility in the number and conformation of arms. The analyses performed in our research will be of great help in unraveling the mysteries of dominant shapes and structures. -
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans by Robert George Young A Thesis presented to The University of Guelph In partial fulfilment of requirements for the degree of Doctor of Philosophy in Integrative Biology Guelph, Ontario, Canada © Robert George Young, March, 2016 ABSTRACT MOLECULAR SPECIES DELIMITATION AND BIOGEOGRAPHY OF CANADIAN MARINE PLANKTONIC CRUSTACEANS Robert George Young Advisors: University of Guelph, 2016 Dr. Sarah Adamowicz Dr. Cathryn Abbott Zooplankton are a major component of the marine environment in both diversity and biomass and are a crucial source of nutrients for organisms at higher trophic levels. Unfortunately, marine zooplankton biodiversity is not well known because of difficult morphological identifications and lack of taxonomic experts for many groups. In addition, the large taxonomic diversity present in plankton and low sampling coverage pose challenges in obtaining a better understanding of true zooplankton diversity. Molecular identification tools, like DNA barcoding, have been successfully used to identify marine planktonic specimens to a species. However, the behaviour of methods for specimen identification and species delimitation remain untested for taxonomically diverse and widely-distributed marine zooplanktonic groups. Using Canadian marine planktonic crustacean collections, I generated a multi-gene data set including COI-5P and 18S-V4 molecular markers of morphologically-identified Copepoda and Thecostraca (Multicrustacea: Hexanauplia) species. I used this data set to assess generalities in the genetic divergence patterns and to determine if a barcode gap exists separating interspecific and intraspecific molecular divergences, which can reliably delimit specimens into species. I then used this information to evaluate the North Pacific, Arctic, and North Atlantic biogeography of marine Calanoida (Hexanauplia: Copepoda) plankton. -
Finfish Diseases
SECTION 2 - FINFISH DISEASES Basic Anatomy of a Typical Bony Fish 48 SECTION 2 - FINFISH DISEASES F. 1 GENERAL TECHNIQUES 50 F.1.1 Gross Observations 50 F.1.1.1 Behaviour 50 F.1.1.2 Surface Observations 50 F.1.1.2.1 Skin and Fins 50 F.1.1.2.2 Gills 51 F.1.1.2.3 Body 52 F.1.1.3 Internal Observations 52 F.1.1.3.1 Body Cavity and Muscle 52 F.1.1.3.2 Organs 52 F.1.2 Environmental Parameters 53 F.1.3 General Procedures 53 F.1.3.1 Pre-Collection Preparation 53 F.1.3.2 Background Information 54 F.1.3.3 Sample Collection for Health Surveillance 54 F.1.3.4 Sample Collection for Disease Diagnosis 54 F.1.3.5 Live Specimen Collection for Shipping 55 F.1.3.6 Dead or Tissue Specimen Collection for Shipping 55 F.1.3.7 Preservation of Tissue Samples 56 F.1.3.8 Shipping Preserved Samples 56 F.1.4 Record-Keeping 57 F.1.4.1 Gross Observations 57 F.1.4.2 Environmental Observations 57 F.1.4.3 Stocking Records 57 F.1.5 References 57 VIRAL DISEASES OF FINFISH F.2 Epizootic Haematopoietic Necrosis (EHN) 59 F.3 Infectious Haematopoietic Necrosis (IHN) 62 F.4 Oncorhynchus masou Virus (OMV) 65 F.5 Infectious Pancreatic Necrosis (IPN) 68 F.6 Viral Encephalopathy and Retinopathy (VER) 72 F.7 Spring Viraemia of Carp (SVC) 76 F.8 Viral Haemorrhagic Septicaemia (VHS) 79 F.9 Lymphocystis 82 BACTERIAL DISEASE OF FINFISH F.10 Bacterial Kidney Disease (BKD) 86 FUNGUS ASSOCIATED DISEASE FINFISH F.11 Epizootic Ulcerative Syndrome (EUS) 90 ANNEXES F.AI OIE Reference Laboratories for Finfish Diseases 95 F.AII List of Regional Resource Experts for Finfish 98 Diseases in Asia-Pacific F.AIII List of Useful Diagnostic Manuals/Guides to 105 Finfish Diseases in Asia-Pacific 49 F.1 GENERAL TECHNIQUES infectious disease agent and should be sampled immediately. -
Trace Elements in Marine Sediment and Organisms in the Gulf of Thailand
International Journal of Environmental Research and Public Health Review Trace Elements in Marine Sediment and Organisms in the Gulf of Thailand Suwalee Worakhunpiset Department of Social and Environmental Medicine, Faculty of Tropical Medicine, Mahidol University, 420/6 Ratchavithi Rd, Bangkok 10400, Thailand; [email protected]; Tel.: +66-2-354-9100 Received: 13 March 2018; Accepted: 13 April 2018; Published: 20 April 2018 Abstract: This review summarizes the findings from studies of trace element levels in marine sediment and organisms in the Gulf of Thailand. Spatial and temporal variations in trace element concentrations were observed. Although trace element contamination levels were low, the increased urbanization and agricultural and industrial activities may adversely affect ecosystems and human health. The periodic monitoring of marine environments is recommended in order to minimize human health risks from the consumption of contaminated marine organisms. Keywords: trace element; environment; pollution; sediment; gulf of Thailand 1. Introduction Environmental pollution is an urgent concern worldwide [1]. Pollutant contamination can exert adverse effects on ecosystems and human health [2]. Trace elements are one type of pollutant released into the environment, and metal contamination levels are rising. The main sources of trace elements are natural activities such as volcanic eruptions and soil erosion, and human activities such as industrial production, waste disposal, the discharge of contaminated wastewater, the inappropriate management of electronic waste (e-waste), and the application of fertilizers in agriculture [3–7]. Once trace elements are released into the environment, they can be dispersed by the wind and deposited in soil and bodies of water, accumulating in marine sediments [8,9].