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Supplementary Table I

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Supplementary Table I Supplementary Table I TNF-inducible genes (360) identified by the microarrays are listed. These genes were identified by the formula M+T/M+M ≥2, and shown is the log2 induction (mean±SD). The Table contains the gene (alphabetical order), the systematic name, and the probe name. Gene Systematic Name Probe Name log2 induction (mean±SD) 7A5 NM_182762 A_32_P131031 3,06 ± 0,68 ABTB2 NM_145804 A_23_P356616 2,65 ± 0,53 ACSL1 NM_001995 A_23_P110212 2,95 ± 0,36 ACSL5 NM_203380 A_24_P201360 1,97 ± 0,61 ACVR2A NM_001616 A_23_P153930 2,80 ± 0,20 ADA NM_000022 A_23_P210482 1,63 ± 0,30 ADM NM_001124 A_23_P127948 3,15 ± 0,31 ADORA2A NM_000675 A_23_P109436 3,89 ± 0,22 AK3L1 NM_001005353 A_32_P108655 3,81 ± 1,22 AK3L2 NM_001002921 A_23_P200524 3,27 ± 1,40 ALS2CR4 NM_152388 A_23_P370097 1,69 ± 0,40 AMPD3 NM_000480 A_23_P116286 1,77 ± 0,32 AMZ1 NM_133463 A_24_P383649 3,08 ± 0,64 ANKRD15 NM_153186 A_32_P64570 4,34 ± 0,48 ANKRD22 NM_144590 A_23_P161428 1,56 ± 0,65 APOL3 NM_145641 A_24_P416997 2,36 ± 0,69 AQP9 NM_020980 A_23_P106362 2,84 ± 0,94 AREG NM_001657 A_23_P259071 2,62 ± 0,63 ARHGAP20 NM_020809 A_23_P422933 1,69 ± 0,44 ARHGEF7 NM_145735 A_23_P417891 2,01 ± 0,41 ARL5B NM_178815 A_23_P378588 3,64 ± 0,73 ARNTL2 NM_020183 A_23_P53345 2,07 ± 0,40 ARRDC3 NM_020801 A_24_P274615 1,84 ± 0,38 ARRDC4 NM_183376 A_23_P339818 1,89 ± 0,25 ATF5 NM_012068 A_23_P119337 1,66 ± 0,28 ATP2B1 NM_001682 A_23_P128319 2,36 ± 0,20 AXUD1 NM_033027 A_23_P121011 2,03 ± 0,46 B4GALT1 NM_001497 A_24_P103803 2,04 ± 0,20 B4GALT5 NM_004776 A_24_P239731 2,10 ± 0,60 BAZ1A NM_013448 A_23_P76799 1,95 ± 0,33 BCAR3 NM_003567 A_23_P97394 1,35 ± 0,17 BCL2A1 NM_004049 A_23_P152002 3,08 ± 1,08 BCMO1 NM_017429 A_23_P124300 1,37 ± 0,13 BIC NR_001458 A_32_P108156 4,69 ± 1,07 BID NM_197966 A_23_P154929 1,59 ± 0,23 BIRC3 NM_001165 A_23_P98350 2,80 ± 0,55 BLR1 NM_032966 A_24_P252945 2,47 ± 0,83 BRPF3 NM_015695 A_24_P414712 1,31 ± 0,26 BTBD4 NM_025224 A_32_P518489 1,95 ± 0,72 I Supplementary Table I, continued Gene Systematic Name Probe Name log2 induction (mean±SD) BTG1 NM_001731 A_23_P87560 1,88 ± 0,47 BTG2 NM_006763 A_23_P62901 1,64 ± 0,48 BTG3 NM_006806 A_23_P80068 2,92 ± 0,14 BTNL8 NM_024850 A_23_P7412 1,39 ± 0,20 CCL1 NM_002981 A_23_P49759 1,88 ± 0,65 CCL19 NM_006274 A_23_P123853 1,42 ± 0,48 CCL20 NM_004591 A_23_P17065 7,76 ± 0,50 CCL22 NM_002990 A_24_P313418 1,67 ± 0,26 CCL23 NM_005064 A_24_P319088 4,23 ± 0,33 CCL3 D00044 A_23_P373017 3,11 ± 0,18 CCL3L3 NM_001001437 A_23_P321920 3,33 ± 0,86 CCL4 NM_002984 A_23_P207564 5,22 ± 0,30 CCL5 NM_002985 A_23_P152838 4,59 ± 0,34 CCL8 NM_005623 A_23_P207456 3,55 ± 0,48 CCR7 NM_001838 A_23_P343398 2,91 ± 1,22 CCRL2 NM_003965 A_23_P69310 1,84 ± 0,37 CCRN4L NM_012118 A_24_P213794 2,99 ± 0,85 CD274 NM_014143 A_23_P338479 2,70 ± 0,75 CD40 NM_001250 A_23_P57036 3,00 ± 0,46 CD44 NM_000610 A_23_P24870 1,78 ± 0,25 CD58 NM_001779 A_23_P138308 1,59 ± 0,30 CD6 NM_006725 A_23_P311875 3,17 ± 0,46 CD69 NM_001781 A_23_P87879 4,03 ± 1,04 CD80 NM_005191 A_24_P320033 3,88 ± 0,36 CD83 NM_004233 A_23_P70670 2,80 ± 0,58 CDC42EP2 NM_006779 A_23_P1602 3,91 ± 0,42 CDGAP NM_020754 A_24_P349039 1,88 ± 0,17 CDKN2B NM_078487 A_24_P360674 3,93 ± 0,40 CENTD1 NM_015230 A_32_P83784 1,38 ± 0,22 CGN NM_020770 A_24_P45728 2,10 ± 0,54 CH25H NM_003956 A_23_P86470 3,38 ± 1,54 CHML NM_001821 A_23_P46118 2,36 ± 0,52 CHST2 NM_004267 A_23_P40847 3,24 ± 0,48 CIAS1 NM_004895 A_23_P9883 1,83 ± 0,27 CLCF1 NM_013246 A_23_P138760 2,25 ± 0,62 CLEC4D NM_080387 A_23_P25235 2,56 ± 1,00 CLEC4E NM_014358 A_24_P78531 3,20 ± 0,55 CLIC4 NM_013943 A_23_P135494 2,50 ± 0,22 CRIM1 NM_016441 A_23_P51105 3,06 ± 0,77 CSF2 NM_000758 A_23_P133408 4,45 ± 0,52 CSF3 NM_000759 A_23_P501754 4,03 ± 0,46 CSRP2 NM_001321 A_23_P44724 3,06 ± 0,61 CTNND2 NM_001332 A_24_P380196 1,84 ± 0,34 CXCL1 NM_001511 A_23_P7144 6,09 ± 0,70 CXCL2 NM_002089 A_23_P315364 3,58 ± 0,81 CXCL3 NM_002090 A_24_P251764 3,29 ± 0,40 CXCL5 NM_002994 A_23_P110204 3,81 ± 0,82 CXCL6 NM_002993 A_23_P155755 4,29 ± 1,28 II Supplementary Table I, continued Gene Systematic Name Probe Name log2 induction (mean±SD) CYP7B1 NM_004820 A_23_P169092 3,00 ± 1,01 DC-UbP NM_152277 A_23_P19061 1,89 ± 0,37 DDIT4 NM_019058 A_23_P104318 2,21 ± 0,42 DGKH NM_152910 A_23_P502980 1,90 ± 0,73 DLC1 NM_182643 A_24_P940115 2,00 ± 0,20 DNAJB5 NM_012266 A_23_P112241 2,56 ± 0,22 DOC1 NM_182909 A_23_P252052 2,41 ± 0,27 DOT1L NM_032482 A_23_P408768 2,21 ± 0,33 DSU NM_018000 A_23_P108948 1,51 ± 0,44 DUSP1 NM_004417 A_23_P110712 2,11 ± 0,40 DUSP2 NM_004418 A_24_P37409 2,41 ± 0,61 DUSP5 NM_004419 A_23_P150018 3,44 ± 1,03 DUSP6 NM_001946 A_23_P139704 1,87 ± 0,58 DYRK3 NM_001004023 A_24_P345209 2,45 ± 1,05 E2F7 NM_203394 A_32_P210202 3,16 ± 1,29 EBI3 NM_005755 A_24_P370201 3,20 ± 0,26 ECE1 NM_001397 A_24_P154080 1,72 ± 0,50 EDEM1 NM_014674 A_24_P285768 1,53 ± 0,22 EDN1 NM_001955 A_23_P214821 3,58 ± 0,34 EGR3 NM_004430 A_23_P216225 2,86 ± 1,09 EHD1 NM_006795 A_23_P52647 3,52 ± 0,57 EID3 NM_001008394 A_23_P65068 2,02 ± 0,42 EMP2 NM_001424 A_23_P106682 1,46 ± 0,16 EREG NM_001432 A_23_P41344 5,53 ± 0,71 ESPL1 NM_012291 A_23_P32707 1,84 ± 0,23 ETV3 NM_005240 A_23_P400945 1,96 ± 0,37 EYA3 NM_001990 A_23_P74737 1,60 ± 0,35 EZH2 NM_004456 A_23_P259641 1,73 ± 0,13 F3 NM_001993 A_23_P126782 5,57 ± 1,02 FAM107B NM_031453 A_23_P149975 1,19 ± 0,14 FAM49A NM_030797 A_23_P21560 1,49 ± 0,20 FAM57A NM_024792 A_23_P50000 1,63 ± 0,38 FCAR NM_133280 A_24_P348265 2,15 ± 0,67 FEZ1 NM_005103 A_24_P201552 4,94 ± 0,85 FFAR2 NM_005306 A_23_P397391 1,58 ± 0,20 FJX1 NM_014344 A_23_P150693 1,80 ± 0,49 FMNL3 NM_175736 A_23_P379200 1,73 ± 0,38 FOSL1 NM_005438 A_23_P322519 2,85 ± 0,81 FOSL2 NM_005253 A_23_P348121 2,24 ± 0,59 FPRL1 NM_001462 A_23_P55649 1,46 ± 0,21 FSCN1 NM_003088 A_23_P168532 3,67 ± 0,79 FUT4 NM_002033 A_23_P12965 1,48 ± 0,29 FZD7 NM_003507 A_23_P209449 1,36 ± 0,23 G0S2 NM_015714 A_23_P74609 5,83 ± 0,38 GBP1 NM_002053 A_23_P62890 3,67 ± 0,58 GBP2 NM_004120 A_23_P85693 2,92 ± 0,26 GCH1 NM_000161 A_23_P163079 4,79 ± 0,42 GJB2 NM_004004 A_23_P204947 4,45 ± 0,48 III Supplementary Table I, continued Gene Systematic Name Probe Name log2 induction (mean±SD) GPR109A NM_177551 A_23_P329924 2,15 ± 0,54 GPR109B NM_006018 A_23_P64721 4,33 ± 0,72 GPR132 NM_013345 A_24_P201994 2,66 ± 0,51 GPR35 NM_005301 A_23_P154245 1,51 ± 0,34 GPR84 NM_020370 A_23_P25155 2,76 ± 0,20 GRAMD1A NM_020895 A_23_P56213 2,97 ± 0,54 GRAMD3 NM_023927 A_23_P22350 2,55 ± 0,07 HEY1 NM_012258 A_32_P83845 5,81 ± 1,20 HIVEP1 NM_002114 A_23_P19619 2,38 ± 0,30 HIVEP2 NM_006734 A_23_P214766 3,45 ± 0,34 HSA251708 AJ251708 A_24_P932084 2,80 ± 0,30 HSD11B1 NM_181755 A_23_P63209 2,27 ± 0,77 IBRDC2 NM_182757 A_24_P406060 3,87 ± 0,31 IBRDC3 NM_153341 A_23_P321388 2,54 ± 0,51 ICAM1 NM_000201 A_23_P153320 3,34 ± 0,56 IER3 NM_003897 A_23_P42257 3,30 ± 0,39 IFNB1 NM_002176 A_23_P71774 2,54 ± 0,76 IFNGR2 NM_005534 A_23_P29036 1,69 ± 0,28 IGSF21 NM_032880 A_32_P78101 2,14 ± 0,54 IL12B NM_002187 A_23_P7560 4,53 ± 0,97 IL15RA NM_172200 A_23_P138680 2,90 ± 0,48 IL18 NM_001562 A_23_P104798 2,75 ± 0,16 IL18R1 NM_003855 A_24_P208567 2,58 ± 1,29 IL1A NM_000575 A_23_P72096 8,19 ± 0,63 IL1B NM_000576 A_23_P79518 6,16 ± 0,53 IL1F9 NM_019618 A_23_P17053 4,12 ± 0,90 IL20 NM_018724 A_23_P46482 2,58 ± 1,63 IL23A NM_016584 A_23_P76078 3,91 ± 0,76 IL28A NM_172138 A_23_P409438 1,72 ± 0,25 IL2RA NM_000417 A_23_P127288 4,22 ± 1,10 IL32 NM_001012631 A_23_P15146 1,82 ± 0,19 IL4I1 NM_172374 A_23_P502520 1,59 ± 0,27 IL6 NM_000600 A_23_P71037 6,54 ± 0,50 IL7R NM_002185 A_23_P404494 4,47 ± 0,97 IL8 NM_000584 A_32_P87013 5,80 ± 1,08 INHBA NM_002192 A_23_P122924 2,65 ± 1,38 INSIG1 NM_198336 A_23_P22027 3,08 ± 0,40 IRAK2 NM_001570 A_23_P80635 2,79 ± 0,88 IRAK3 NM_007199 A_23_P162300 2,00 ± 0,20 ITGB8 NM_002214 A_24_P273599 2,93 ± 0,73 JAG1 NM_000214 A_23_P210763 5,20 ± 0,38 JUNB NM_002229 A_23_P4821 1,72 ± 0,25 KCNA3 NM_002232 A_23_P201138 3,68 ± 0,34 KCNJ2 NM_000891 A_23_P329261 3,45 ± 0,45 KCNN4 NM_002250 A_23_P67529 2,14 ± 0,40 KMO NM_003679 A_23_P200838 2,17 ± 0,47 KRT23 NM_015515 A_23_P78248 2,50 ± 0,66 KYNU NM_003937 A_24_P11506 2,24 ± 0,31 IV Supplementary Table I, continued Gene Systematic Name Probe Name log2 induction (mean±SD) LAD1 NM_005558 A_23_P415510 2,98 ± 0,88 LAMB3 NM_001017402 A_23_P86012 3,36 ± 0,52 LAMP3 NM_014398 A_23_P29773 2,38 ± 1,03 LCT NM_002299 A_23_P79217 1,86 ± 0,29 LENG9 NM_198988 A_32_P493225 3,08 ± 0,55 LIMS3 NM_033514 A_23_P365685 1,69 ± 0,50 LINCR NM_001080535 A_23_P328740 3,15 ± 0,61 LITAF NM_004862 A_23_P3532 1,45 ± 0,47 LONRF1 NM_152271 A_23_P94216 1,90 ± 0,39 LRFN5 NM_152447 A_23_P163195 3,11 ± 0,78 LRP12 NM_013437 A_23_P8906 1,92 ± 0,62 LRRC32 NM_005512 A_24_P389916 4,24 ± 1,02 LSS NM_002340 A_24_P110799 1,88 ± 0,29 MAFF NM_012323 A_23_P103110 2,27 ± 0,56 MAP2K3 NM_145109 A_23_P118427 2,28 ± 0,40 MAP3K8 NM_005204 A_23_P23947 3,09 ± 0,46 MARCH3 NM_178450 A_23_P321511 1,92 ± 0,32 MCL1 NM_021960 A_24_P319635 1,92 ± 0,53 MCOLN2 NM_153259 A_23_P23639 2,75 ± 0,55 MCTP1 NM_024717 A_24_P212481 1,79 ± 0,47 MESDC1 NM_022566 A_23_P99891 1,42 ± 0,25 MET NM_000245 A_23_P359245 3,66 ± 1,39 MFSD2 NM_032793 A_23_P43820 2,81 ± 0,33 MN1 NM_002430 A_23_P6381 2,27 ± 0,73 MOBKL2C NM_145279 A_24_P225339 1,87 ± 0,31 MSC NM_005098 A_23_P256948 4,29 ± 0,31 MTF1 NM_005955 A_23_P74241 2,36 ± 0,18 MYC NM_002467 A_23_P215956 2,70 ± 0,87 MYO1G NM_033054 A_23_P257542 1,37 ± 0,37 N4BP3 NM_015111 A_23_P58747 2,03 ± 0,38 NAB1 NM_005966 A_23_P209805 1,80 ± 0,31 NBN NM_002485 A_23_P251480 2,75 ± 0,33 NFE2L3 NM_004289 A_23_P42718 2,20 ± 0,32 NFKB1 NM_003998 A_23_P30024 3,00 ± 0,27 NFKB2 NM_002502 A_23_P202156 2,56 ± 0,25 NFKBIA NM_020529 A_23_P106002 2,45 ± 0,28 NFKBIE NM_004556
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