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A Study of EEG Feature Complexity in Epileptic Seizure Prediction
applied sciences Article A Study of EEG Feature Complexity in Epileptic Seizure Prediction Imene Jemal 1,2,∗, Amar Mitiche 1 and Neila Mezghani 2,3 1 INRS-Centre Énergie, Matériaux et Télécommunications, Montréal, QC H5A 1K6, Canada; [email protected] 2 Centre de Recherche LICEF, Université TÉLUQ, Montréal, QC H2S 3L4, Canada; [email protected] 3 Laboratoire LIO, Centre de Recherche du CHUM, Montréal, QC H2X 0A9, Canada * Correspondence: [email protected] Abstract: The purpose of this study is (1) to provide EEG feature complexity analysis in seizure prediction by inter-ictal and pre-ital data classification and, (2) to assess the between-subject variability of the considered features. In the past several decades, there has been a sustained interest in predicting epilepsy seizure using EEG data. Most methods classify features extracted from EEG, which they assume are characteristic of the presence of an epilepsy episode, for instance, by distinguishing a pre-ictal interval of data (which is in a given window just before the onset of a seizure) from inter-ictal (which is in preceding windows following the seizure). To evaluate the difficulty of this classification problem independently of the classification model, we investigate the complexity of an exhaustive list of 88 features using various complexity metrics, i.e., the Fisher discriminant ratio, the volume of overlap, and the individual feature efficiency. Complexity measurements on real and synthetic data testbeds reveal that that seizure prediction by pre-ictal/inter-ictal feature distinction is a problem of significant complexity. It shows that several features are clearly useful, without decidedly identifying an optimal set. -
Computer-Aided Detection of Sleep Apnea and Sleep Stage Classification Using HRV and EEG Signals Edson F
University of Texas at El Paso DigitalCommons@UTEP Open Access Theses & Dissertations 2010-01-01 Computer-Aided Detection Of Sleep Apnea And Sleep Stage Classification Using HRV And EEG Signals Edson F. Estrada University of Texas at El Paso, [email protected] Follow this and additional works at: https://digitalcommons.utep.edu/open_etd Part of the Biomedical Commons, Electrical and Electronics Commons, European Languages and Societies Commons, and the Scandinavian Studies Commons Recommended Citation Estrada, Edson F., "Computer-Aided Detection Of Sleep Apnea And Sleep Stage Classification Using HRV And EEG Signals" (2010). Open Access Theses & Dissertations. 2482. https://digitalcommons.utep.edu/open_etd/2482 This is brought to you for free and open access by DigitalCommons@UTEP. It has been accepted for inclusion in Open Access Theses & Dissertations by an authorized administrator of DigitalCommons@UTEP. For more information, please contact [email protected]. COMPUTER-AIDED DETECTION OF SLEEP APNEA AND SLEEP STAGE CLASSIFICATION USING HRV AND EEG SIGNALS EDSON F. ESTRADA Department of Electrical and Computer Engineering APPROVED: ___________________________________ Homer Nazeran, Ph.D., Chair ___________________________________ Patricia A. Nava, Ph.D., Co-Chair ___________________________________ Scott Starks, Ph.D. ___________________________________ Humberto Ochoa, Ph.D. ___________________________________ Luis Carcoba, Ph.D. ____________________________ Patricia D. Witherspoon, Ph.D. Dean of the Graduate School COMPUTER-AIDED DETECTION OF SLEEP APNEA AND SLEEP STAGE CLASSIFICATION USING HRV AND EEG SIGNALS By EDSON F. ESTRADA, M.S. EE DISSERTATION Presented to the Faculty of the Graduate School of The University of Texas at El Paso In Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy Department of Electrical and Computer Engineering THE UNIVERSITY OF TEXAS AT EL PASO DICEMBER 2010 Acknowledgements I would like to express my gratitude to the following people for their support and assistance in developing this dissertation. -
Hidden Conditional Random Fields for Classification of Imaginary Motor Tasks from Eeg Data
HIDDEN CONDITIONAL RANDOM FIELDS FOR CLASSIFICATION OF IMAGINARY MOTOR TASKS FROM EEG DATA Jaime F. Delgado Saa†‡,Mujdat¨ C¸etin† † Signal Processing and Information Systems Laboratory, Sabanci University Orhanli, Tuzla, 34956 Istanbul, Turkey ‡ Department of Electrical and Electronics Engineering, Universidad del Norte Barranquilla, Colombia [ email: delgado, mcetin ]@sabanciuniv.edu ABSTRACT the EEG signals have been proposed [4, 5, 6]. Furthermore, algo- rithms involving stochastic time series models taking into account Brain-computer interfaces (BCIs) are systems that allow the changes of the signal power with time, such as hidden Markov mod- control of external devices using information extracted from brain els (HMMs) [7, 8, 9, 10] have been used in combination with fea- signals. Such systems find application in rehabilitation of patients tures describing the temporal behavior of the EEG signals [11, 12]. with limited or no muscular control. One mechanism used in BCIs We share the perspective with this latter body of work that changes is the imagination of motor activity, which produces variations on in the power of the signals during execution of motor tasks reflect the power of the electroencephalography (EEG) signals recorded the underlying states in the brain and that the sequence of states pro- over the motor cortex. In this paper, we propose a new approach for vides useful information for discrimination of different imaginary classification of imaginary motor tasks based on hidden conditional motor tasks. In previous work based -
The Entropy Universe
entropy Review The Entropy Universe Maria Ribeiro 1,2,* , Teresa Henriques 3,4 , Luísa Castro 3 , André Souto 5,6,7 , Luís Antunes 1,2 , Cristina Costa-Santos 3,4 and Andreia Teixeira 3,4,8 1 Institute for Systems and Computer Engineering, Technology and Science (INESC-TEC), 4200-465 Porto, Portugal; [email protected] 2 Computer Science Department, Faculty of Sciences, University of Porto, 4169-007 Porto, Portugal 3 Centre for Health Technology and Services Research (CINTESIS), Faculty of Medicine University of Porto, 4200-450 Porto, Portugal; [email protected] (T.H.); [email protected] (L.C.); [email protected] (C.C.-S.); andreiasofi[email protected] (A.T.) 4 Department of Community Medicine, Information and Health Decision Sciences-MEDCIDS, Faculty of Medicine, University of Porto, 4200-450 Porto, Portugal 5 LASIGE, Faculdade de Ciências da Universidade de Lisboa, 1749-016 Lisboa, Portugal; [email protected] 6 Departamento de Informática, Faculdade de Ciências da Universidade de Lisboa, 1749-016 Lisboa, Portugal 7 Instituto de Telecomunicações, 1049-001 Lisboa, Portugal 8 Instituto Politécnico de Viana do Castelo, 4900-347 Viana do Castelo, Portugal * Correspondence: [email protected] Abstract: About 160 years ago, the concept of entropy was introduced in thermodynamics by Rudolf Clausius. Since then, it has been continually extended, interpreted, and applied by researchers in many scientific fields, such as general physics, information theory, chaos theory, data mining, and mathematical linguistics. This paper presents The Entropy -
A Comparative Review on Sleep Stage Classification Methods in Patients and Healthy Individuals Reza Boostani, Foroozan Karimzadeh, Mohammad Torabi-Nami
A Comparative Review on Sleep Stage Classification Methods in Patients and healthy Individuals Reza Boostani, Foroozan Karimzadeh, Mohammad Torabi-Nami To cite this version: Reza Boostani, Foroozan Karimzadeh, Mohammad Torabi-Nami. A Comparative Review on Sleep Stage Classification Methods in Patients and healthy Individuals. 2016. hal-01390384 HAL Id: hal-01390384 https://hal.archives-ouvertes.fr/hal-01390384 Preprint submitted on 1 Nov 2016 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. A Comparative Review on Sleep Stage Classification Methods in Patients and healthy Individuals Reza Boostania, Foroozan Karimzadehb∗, Mohammad Torabi-Namic a;b Department of Computer Science and Information technology, School of Electrical and Computer Engineering, Shiraz University, Shiraz, Iran. c Department of Neuroscience, School of Advanced Medical Sciences and Technologies, Shiraz University of Medical Sciences, Shiraz, Iran. [email protected] , [email protected] ∗ Corresponding author: Tel: +987136474605, E-mail: [email protected] Abstract Background and objective: Proper scoring of sleep stages can give clinical information on diagnosing patients with sleep disor- ders. Since traditional visual scoring of the entire sleep is highly time-consuming and dependent to experts’ experience, automatic schemes based on electroencephalogram (EEG) analysis are broadly developed to solve these problems. -
A Fast and Accurate Approach for Real-Time Seizure Detection in the Iomt
A Fast and Accurate Approach for Real-Time Seizure Detection in the IoMT Md Abu Sayeed Saraju P. Mohanty Dept. of Computer Science and Engineering Dept. of Computer Science and Engineering University of North Texas, USA. University of North Texas, USA. Email: [email protected] Email: [email protected] Elias Kougianos Hitten Zaveri Dept. of Engineering Technology Department of Neurology University of North Texas, USA. Yale University, USA. Email: [email protected] Email: [email protected] Abstract—We propose an EEG-based seizure detection method monitoring brain function and dysfunction. In epilepsy we are which uses the discrete wavelet transform (DWT), Hjorth pa- primarily interested in two states: ictal (seizure) and interictal rameters and a k-NN classifier. Seizure detection is performed in (between seizure). Seizures can be identified by visual inspec- three stages. In the first stage, EEG signals are decomposed by the DWT into sub-bands and Hjorth parameters are extracted from tion of the EEG, though this takes considerable time and effort each of these sub-bands. In the second stage, a k-NN classifier [10]. Computer assisted detection of seizures can be valuable is used to classify the EEG data. The results demonstrate a if it can overcome these drawbacks. EEG signals can be well significant difference in Hjorth parameters between interictal and characterized from extracted features which serve to capture ictal EEG with ictal EEG being less complex than interictal EEG. distinctive information and can be central to the accuracy of We report an accuracy of 100% for a classification of normal vs. -
Entropy Analysis of Financial Time Series Arxiv:1807.09423V1 [Q-Fin.ST]
Entropy Analysis of Financial Time Series A thesis submitted to The University of Manchester for the degree of Doctor in Business Administration. 2015 arXiv:1807.09423v1 [q-fin.ST] 25 Jul 2018 Stephan Schwill Manchester Business School Contents 1 Introduction 11 1.1 Bivariate Analysis of Drawdowns . 12 1.2 Information Flows between FX Volatility Regimes . 14 1.3 Volatility Timing of Hedge Funds and Entropy . 16 2 Entropy Measure and Information Theory 19 2.1 Introduction . 20 2.2 Entropy . 20 2.3 Mutual Information and Transfer Entropy . 23 2.3.1 Definition . 23 2.3.2 Entropy Estimation, Statistical Features . 26 2.3.3 Process Entropy . 31 2.3.4 Entropy Magnitude . 32 2.4 Approximate Entropy (ApEn) . 33 2.4.1 ApEn Definition . 33 2.4.2 ApEn Estimation . 36 3 Bivariate Analysis of Drawdowns 38 3.1 Introduction . 39 3.2 Related Literature . 41 3.2.1 Drawdowns Literature . 41 3.2.2 Entropy Econometric Literature . 46 3.3 Data . 48 3.4 Information Theoretic Method . 51 3.4.1 Entropy Measures . 51 3.5 Empirical Results . 57 3.5.1 Dependency between Draws in EUR/USD and GBP/USD . 57 3.5.2 Information Flows between Draws in EUR/USD and GBP/USD 61 3.6 Conclusion . 66 4 Information Flows between FX Volatility Regimes 69 4.1 Introduction . 70 4.2 Hidden Markov Models . 72 4.2.1 Foundations . 72 4.2.2 HMM Estimation . 74 4.3 Data . 77 4.4 HMM Estimation Results . 79 4.5 Dependence between Hidden States . 82 4.5.1 Hidden State Dependence . -
Decoding the Neural Signatures of Valence and Arousal from Portable EEG Headset
bioRxiv preprint doi: https://doi.org/10.1101/2021.07.23.453533; this version posted July 23, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Decoding the Neural Signatures of Valence and Arousal From Portable EEG Headset Nikhil Garg1,2,3,*, Rohit Garg1,3, Parrivesh NS1,3, Apoorv Anand1,3, V.A.S. Abhinav1,3, Veeky Baths1,3,* 1 Cognitive Neuroscience Lab, BITS Pilani - K.K.Birla Goa Campus, Goa, India 2 Institut Interdisciplinaire d'Innovation Technologique (3IT), Laboratoire Nanotechnologies Nanosyst`emes(LN2) { CNRS UMI-3463 { 3IT, Universit´ede Sherbrooke, Sherbrooke, Canada 3 Ironwork Insights Pvt. Ltd., India * Corresponding authors * [email protected] * [email protected] Abstract This paper focuses on classifying emotions on the valence-arousal plane using various feature extraction, feature selection and machine learning techniques. Emotion classification using EEG data and machine learning techniques has been on the rise in the recent past. We evaluate different feature extraction techniques, feature selection techniques and propose the optimal set of features and electrodes for emotion recognition. The images from the OASIS image dataset were used for eliciting the valence and arousal emotions, and the EEG data was recorded using the Emotiv Epoc X mobile EEG headset. The analysis is additionally carried out on publicly available datasets: DEAP and DREAMER. We propose a novel feature ranking technique and incremental learning approach to analyze the dependence of performance on the number of participants. -
Arxiv:1908.00492V1 [Eess.SP] 1 Aug 2019 Review Continuous Electroencephalograms (Eegs) to Monitor Epileptic Patients
A review of feature extraction and performance evaluation in epileptic seizure detection using EEG Poomipat Boonyakitanont1, Apiwat Lek-uthai1, Krisnachai Chomtho2, and Jitkomut Songsiri1 1Department of Electrical Engineering, Faculty of Engineering, Chulalongkorn University, Thailand 2Department of Pediatrics, Faculty of Medicine, Chulalongkorn University, Thailand August 2, 2019 Abstract Since the manual detection of electrographic seizures in continuous electroencephalogram (EEG) monitoring is very time-consuming and requires a trained expert, attempts to develop automatic seizure detection are diverse and ongoing. Machine learning approaches are intensely being applied to this problem due to their ability to classify seizure conditions from a large amount of data, and provide pre-screened results for neurologists. Several features, data trans- formations, and classifiers have been explored to analyze and classify seizures via EEG signals. In the literature, some jointly-applied features used in the classification may have shared simi- lar contributions, making them redundant in the learning process. Therefore, this paper aims to comprehensively summarize feature descriptions and their interpretations in characterizing epileptic seizures using EEG signals, as well as to review classification performance metrics. To provide meaningful information of feature selection, we conducted an experiment to examine the quality of each feature independently. The Bayesian error and non-parametric probability distribution estimation were employed to determine the significance of the individual features. Moreover, a redundancy analysis using a correlation-based feature selection was applied. The results showed that the following features {variance, energy, nonlinear energy, and Shannon entropy computed on a raw EEG signal, as well as variance, energy, kurtosis, and line length calculated on wavelet coefficients{ were able to significantly capture the seizures. -
A MATLAB Toolkit for Computation of Multiple Measures on Time Series Data Bases
Accepted in the Journal of Statistical Software, January 2010 Measures of Analysis of Time Series (MATS): A MATLAB Toolkit for Computation of Multiple Measures on Time Series Data Bases Dimitris Kugiumtzis, Alkiviadis Tsimpiris Department of Mathematical, Physical and Computational Sciences Faculty of Engineering, Aristotle University of Thessaloniki Thessaloniki 54124, Greece Corresponding author Dimitris Kugiumtzis Department of Mathematical, Physical and Computational Sciences, Faculty of Engineering, Aristotle University of Thessaloniki, Thessaloniki 54124, Greece e-mail: [email protected] url: http://users.auth.gr/dkugiu fax: +30 2310995958 Running title Optimal Measures and Preictal States Abstract In many applications, such as physiology and finance, large time series data bases are to be analyzed requir- ing the computation of linear, nonlinear and other measures. Such measures have been developed and imple- mented in commercial and freeware softwares rather selectively and independently. The Measures of Analysis of Time Series (MATS) MATLAB toolkit is designed to handle an arbitrary large set of scalar time series and compute a large variety of measures on them, allowing for the specification of varying measure parameters as well. The variety of options with added facilities for visualization of the results support different settings of time series analysis, such as the detection of dynamics changes in long data records, resampling (surrogate or bootstrap) tests for independence and linearity with various test statistics, and discrimination power of different measures and for different combinations of their parameters. The basic features of MATS are presented and the implemented measures are briefly described. The usefulness of MATS is illustrated on some empirical examples along with screenshots. -
Quality Assessment of Single-Channel EEG for Wearable Devices
sensors Article Quality Assessment of Single-Channel EEG for Wearable Devices Fanny Grosselin 1,2,* , Xavier Navarro-Sune 2 , Alessia Vozzi 2, Katerina Pandremmenou 2, Fabrizio De Vico Fallani 1,3, Yohan Attal 2 and Mario Chavez 4 1 hlSorbonne Université, UPMC Univ. Paris 06, INSERM U-1127, CNRS UMR-7225, Institut du Cerveau et de la Moelle Épinière (ICM), Groupe Hospitalier Pitié Salpêtrière-Charles Foix, 75013 Paris, France 2 myBrainTechnologies, 75010 Paris, France; [email protected] (X.N.-S.); [email protected] (A.V.); [email protected] (K.P.); [email protected] (Y.A.) 3 INRIA, Aramis Project-Team, F-75013 Paris, France; [email protected] 4 CNRS UMR-7225, Groupe Hospitalier Pitié-Salpêtrière-Charles Foix, 75013 Paris, France; [email protected] * Correspondence: [email protected] Received: 22 January 2019; Accepted: 28 January 2019; Published: 31 January 2019 Abstract: The recent embedding of electroencephalographic (EEG) electrodes in wearable devices raises the problem of the quality of the data recorded in such uncontrolled environments. These recordings are often obtained with dry single-channel EEG devices, and may be contaminated by many sources of noise which can compromise the detection and characterization of the brain state studied. In this paper, we propose a classification-based approach to effectively quantify artefact contamination in EEG segments, and discriminate muscular artefacts. The performance of our method were assessed on different databases containing either artificially contaminated or real artefacts recorded with different type of sensors, including wet and dry EEG electrodes. Furthermore, the quality of unlabelled databases was evaluated. -
Neural Networks Time Domain Parameters As a Feature for EEG-Based Brain–Computer Interfaces
Neural Networks 22 (2009) 1313–1319 Contents lists available at ScienceDirect Neural Networks journal homepage: www.elsevier.com/locate/neunet 2009 Special Issue Time Domain Parameters as a feature for EEG-based Brain–Computer InterfacesI Carmen Vidaurre c,a,∗, Nicole Krämer c, Benjamin Blankertz c,a, Alois Schlögl b a IDA at Fraunhofer FIRST, Kekulestr. 7, 12489 Berlin, Germany b Institute for Human–Computer Interfaces, University of Technology Graz, Krengasse 37/I, 8010 Graz, Austria c Machine Learning Group, Berlin Institute of Technology, Franklinstr. 28/29, 10587 Berlin, Germany article info a b s t r a c t Article history: Several feature types have been used with EEG-based Brain–Computer Interfaces. Among the most Received 14 October 2008 popular are logarithmic band power estimates with more or less subject-specific optimization of the Received in revised form 3 July 2009 frequency bands. In this paper we introduce a feature called Time Domain Parameter that is defined by Accepted 16 July 2009 the generalization of the Hjorth parameters. Time Domain Parameters are studied under two different conditions. The first setting is defined when no data from a subject is available. In this condition our Keywords: results show that Time Domain Parameters outperform all band power features tested with all spatial Brain–Computer Interface filters applied. The second setting is the transition from calibration (no feedback) to feedback, in which Hjorth parameters Band power estimates the frequency content of the signals can change for some subjects. We compare Time Domain Parameters Time Domain Parameters with logarithmic band power in subject-specific bands and show that these features are advantageous in Derivative operator this situation as well.