Topoisomerase II Expression in Breast Cancer
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Up-Regulation of Telomerase Activity in Human Pancreatic Cancer Cells After Exposure to Etoposide
British Journal of Cancer (2000) 82(11), 1819–1826 © 2000 Cancer Research Campaign DOI: 10.1054/ bjoc.2000.1117, available online at http://www.idealibrary.com on Up-regulation of telomerase activity in human pancreatic cancer cells after exposure to etoposide N Sato, K Mizumoto, M Kusumoto, S Nishio, N Maehara, T Urashima, T Ogawa and M Tanaka Department of Surgery and Oncology, Graduate School of Medical Sciences, Kyushu University, Fukuoka 812-8582, Japan Summary Telomerase plays a critical role in the development of cellular immortality and oncogenesis. Activation of telomerase occurs in a majority of human malignant tumours, and the relation between telomerase and vulnerability to drug-mediated apoptosis remains unclear. In this study, we demonstrate, for the first time, up-regulation of telomerase activity in human pancreatic cancer cells treated with etoposide, a topoisomerase II inhibitor. Exposure of MIA PaCa-2 cells to etoposide at various concentrations (1–30 µM) resulted in two- to threefold increases in telomerase activity. Up-regulation was detectable 24 h after drug exposure and was accompanied by enhanced expression of mRNA of the human telomerase reverse transcriptase. Telomerase activation was also observed in AsPC-1 and PANC-1 cells but not in KP-3 and KP-1N cells. Furthermore, we found a negative correlation between increased telomerase activity and the percentage of dead cells after etoposide treatment. These findings suggest the existence of an anti-apoptotic pathway through which telomerase is up-regulated in response to DNA damage. This telomerase activation pathway may be one of the mechanisms responsible for the development of etoposide resistance in certain pancreatic cancer cells. -
B Number Gene Name Mrna Intensity Mrna
sample) total list predicted B number Gene name assignment mRNA present mRNA intensity Gene description Protein detected - Membrane protein membrane sample detected (total list) Proteins detected - Functional category # of tryptic peptides # of tryptic peptides # of tryptic peptides detected (membrane b0002 thrA 13624 P 39 P 18 P(m) 2 aspartokinase I, homoserine dehydrogenase I Metabolism of small molecules b0003 thrB 6781 P 9 P 3 0 homoserine kinase Metabolism of small molecules b0004 thrC 15039 P 18 P 10 0 threonine synthase Metabolism of small molecules b0008 talB 20561 P 20 P 13 0 transaldolase B Metabolism of small molecules chaperone Hsp70; DNA biosynthesis; autoregulated heat shock b0014 dnaK 13283 P 32 P 23 0 proteins Cell processes b0015 dnaJ 4492 P 13 P 4 P(m) 1 chaperone with DnaK; heat shock protein Cell processes b0029 lytB 1331 P 16 P 2 0 control of stringent response; involved in penicillin tolerance Global functions b0032 carA 9312 P 14 P 8 0 carbamoyl-phosphate synthetase, glutamine (small) subunit Metabolism of small molecules b0033 carB 7656 P 48 P 17 0 carbamoyl-phosphate synthase large subunit Metabolism of small molecules b0048 folA 1588 P 7 P 1 0 dihydrofolate reductase type I; trimethoprim resistance Metabolism of small molecules peptidyl-prolyl cis-trans isomerase (PPIase), involved in maturation of b0053 surA 3825 P 19 P 4 P(m) 1 GenProt outer membrane proteins (1st module) Cell processes b0054 imp 2737 P 42 P 5 P(m) 5 GenProt organic solvent tolerance Cell processes b0071 leuD 4770 P 10 P 9 0 isopropylmalate -
Topoisomerase II
Topoisomerase II-␣ Expression in Different Cell Cycle Phases in Fresh Human Breast Carcinomas Kenneth Villman, M.D., Elisabeth Ståhl, M.S., Göran Liljegren, M.D., Ph.D., Ulf Tidefelt, M.D., Ph.D., Mats G. Karlsson, M.D., Ph.D. Departments of Oncology (KV), Pathology (ES, MGK), Surgery (GL), and Medicine (UT), Örebro University Hospital, Örebro, Sweden; and Karolinska Institute (UT), Stockholm, Sweden cluded in most adjuvant chemotherapy regimens Topoisomerase II-␣ (topo II␣) is the key target en- for breast cancer. Anthracyclines belong to the an- zyme for the topoisomerase inhibitor class of anti- ticancer agents called topoisomerase (topo) II cancer drugs. In normal cells, topo II␣ is expressed inhibitors. predominantly in the S/G2/M phase of the cell cycle. Topoisomerases are enzymes, present in the nu- In malignant cells, in vitro studies have indicated clei in mammalian cells, that regulate topological that the expression of topo II␣ is both higher and changes in DNA that are vital for many cellular less dependent on proliferation state in the cell. We processes such as replication and transcription (5). studied fresh specimens from 50 cases of primary They perform their function by introducing tran- breast cancer. The expression of topo II␣ in differ- sient protein-bridged DNA breaks on one (topo- ent cell cycle phases was analyzed with two- isomerase I) or both DNA strands (topoisomerase parameter flow cytometry using the monoclonal II; 6). There are two isoenzymes of topoisomerase antibody SWT3D1 and propidium iodide staining. II, with genetically and biochemical distinct fea- ␣ The expression of topo II was significantly higher tures. -
The Influence of Cell Cycle Regulation on Chemotherapy
International Journal of Molecular Sciences Review The Influence of Cell Cycle Regulation on Chemotherapy Ying Sun 1, Yang Liu 1, Xiaoli Ma 2 and Hao Hu 1,* 1 Institute of Biomedical Materials and Engineering, College of Materials Science and Engineering, Qingdao University, Qingdao 266071, China; [email protected] (Y.S.); [email protected] (Y.L.) 2 Qingdao Institute of Measurement Technology, Qingdao 266000, China; [email protected] * Correspondence: [email protected] Abstract: Cell cycle regulation is orchestrated by a complex network of interactions between proteins, enzymes, cytokines, and cell cycle signaling pathways, and is vital for cell proliferation, growth, and repair. The occurrence, development, and metastasis of tumors are closely related to the cell cycle. Cell cycle regulation can be synergistic with chemotherapy in two aspects: inhibition or promotion. The sensitivity of tumor cells to chemotherapeutic drugs can be improved with the cooperation of cell cycle regulation strategies. This review presented the mechanism of the commonly used chemotherapeutic drugs and the effect of the cell cycle on tumorigenesis and development, and the interaction between chemotherapy and cell cycle regulation in cancer treatment was briefly introduced. The current collaborative strategies of chemotherapy and cell cycle regulation are discussed in detail. Finally, we outline the challenges and perspectives about the improvement of combination strategies for cancer therapy. Keywords: chemotherapy; cell cycle regulation; drug delivery systems; combination chemotherapy; cancer therapy Citation: Sun, Y.; Liu, Y.; Ma, X.; Hu, H. The Influence of Cell Cycle Regulation on Chemotherapy. Int. J. 1. Introduction Mol. Sci. 2021, 22, 6923. https:// Chemotherapy is currently one of the main methods of tumor treatment [1]. -
The Role of Sumoylation of DNA Topoisomerase Iiα C-Terminal Domain in the Regulation of Mitotic Kinases In
SUMOylation at the centromere: The role of SUMOylation of DNA topoisomerase IIα C-terminal domain in the regulation of mitotic kinases in cell cycle progression. By Makoto Michael Yoshida Submitted to the graduate degree program in the Department of Molecular Biosciences and the Graduate Faculty of the University of Kansas in partial fulfillment of the requirements for the degree of Doctor of Philosophy. ________________________________________ Chairperson: Yoshiaki Azuma, Ph.D. ________________________________________ Roberto De Guzman, Ph.D. ________________________________________ Kristi Neufeld, Ph.D. _________________________________________ Berl Oakley, Ph.D. _________________________________________ Blake Peterson, Ph.D. Date Defended: July 12, 2016 The Dissertation Committee for Makoto Michael Yoshida certifies that this is the approved version of the following dissertation: SUMOylation at the centromere: The role of SUMOylation of DNA topoisomerase IIα C-terminal domain in the regulation of mitotic kinases in cell cycle progression. ________________________________________ Chairperson: Yoshiaki Azuma, Ph.D. Date approved: July 12, 2016 ii ABSTRACT In many model systems, SUMOylation is required for proper mitosis; in particular, chromosome segregation during anaphase. It was previously shown that interruption of SUMOylation through the addition of the dominant negative E2 SUMO conjugating enzyme Ubc9 in mitosis causes abnormal chromosome segregation in Xenopus laevis egg extract (XEE) cell-free assays, and DNA topoisomerase IIα (TOP2A) was identified as a substrate for SUMOylation at the mitotic centromeres. TOP2A is SUMOylated at K660 and multiple sites in the C-terminal domain (CTD). We sought to understand the role of TOP2A SUMOylation at the mitotic centromeres by identifying specific binding proteins for SUMOylated TOP2A CTD. Through affinity isolation, we have identified Haspin, a histone H3 threonine 3 (H3T3) kinase, as a SUMOylated TOP2A CTD binding protein. -
RECQ5-Dependent Sumoylation of DNA Topoisomerase I Prevents Transcription-Associated Genome Instability
ARTICLE Received 20 Aug 2014 | Accepted 23 Feb 2015 | Published 8 Apr 2015 DOI: 10.1038/ncomms7720 RECQ5-dependent SUMOylation of DNA topoisomerase I prevents transcription-associated genome instability Min Li1, Subhash Pokharel1,*, Jiin-Tarng Wang1,*, Xiaohua Xu1,* & Yilun Liu1 DNA topoisomerase I (TOP1) has an important role in maintaining DNA topology by relaxing supercoiled DNA. Here we show that the K391 and K436 residues of TOP1 are SUMOylated by the PIAS1–SRSF1 E3 ligase complex in the chromatin fraction containing active RNA polymerase II (RNAPIIo). This modification is necessary for the binding of TOP1 to RNAPIIo and for the recruitment of RNA splicing factors to the actively transcribed chromatin, thereby reducing the formation of R-loops that lead to genome instability. RECQ5 helicase promotes TOP1 SUMOylation by facilitating the interaction between PIAS1, SRSF1 and TOP1. Unexpectedly, the topoisomerase activity is compromised by K391/K436 SUMOylation, and this provides the first in vivo evidence that TOP1 activity is negatively regulated at transcriptionally active chromatin to prevent TOP1-induced DNA damage. Therefore, our data provide mechanistic insight into how TOP1 SUMOylation contributes to genome maintenance during transcription. 1 Department of Radiation Biology, Beckman Research Institute, City of Hope, Duarte, California 91010-3000, USA. * These authors contributed equally to this work. Correspondence and requests for materials should be addressed to Y.L. (email: [email protected]). NATURE COMMUNICATIONS | 6:6720 | DOI: 10.1038/ncomms7720 | www.nature.com/naturecommunications 1 & 2015 Macmillan Publishers Limited. All rights reserved. ARTICLE NATURE COMMUNICATIONS | DOI: 10.1038/ncomms7720 he prevention and efficient repair of DNA double-stranded transcriptionally active chromatin to prevent R-loops. -
Ciprofloxacin Stress Proteome of the Extended-Spectrum Beta-Lactamase
Ciprofloxacin stress proteome of the extended-spectrum beta-lactamase producing Escherichia coli from slaughtered pigs Sónia Ramos, Ingrid Chafsey, Michel Hébraud, Margarida Sousa, Patrícia Poeta, Gilberto Igrejas To cite this version: Sónia Ramos, Ingrid Chafsey, Michel Hébraud, Margarida Sousa, Patrícia Poeta, et al.. Ciprofloxacin stress proteome of the extended-spectrum beta-lactamase producing Escherichia coli from slaughtered pigs. Current Proteomics, Bentham Science Publishers, 2016, 13, pp.285-289. 10.2174/1570164613666161018144215. hal-01602438 HAL Id: hal-01602438 https://hal.archives-ouvertes.fr/hal-01602438 Submitted on 27 May 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Send Orders for Reprints to [email protected] Current Proteomics, 2016, 13, 1-5 1 RESEARCH ARTICLE Ciprofloxacin Stress Proteome of the Extended-Spectrum -lactamase Producing Escherichia coli from Slaughtered Pigs Sónia Ramos1,2,3,4, Ingrid Chafsey5, Michel Hébraud5,6, Margarida Sousa1,2,3,4, Patrícia Poeta4,7 and Gilberto Igrejas1,2,7,* 1Functional Genomics -
Type II DNA Topoisomerases Cause Spontaneous Double-Strand Breaks in Genomic DNA
G C A T T A C G G C A T genes Review Type II DNA Topoisomerases Cause Spontaneous Double-Strand Breaks in Genomic DNA Suguru Morimoto 1, Masataka Tsuda 1, Heeyoun Bunch 2 , Hiroyuki Sasanuma 1, Caroline Austin 3 and Shunichi Takeda 1,* 1 Department of Radiation Genetics, Graduate School of Medicine, Kyoto University, Yoshida Konoe, Sakyo-ku, Kyoto 606-8501, Japan; [email protected] (S.M.); [email protected] (M.T.); [email protected] (H.S.) 2 Department of Applied Biosciences, College of Agriculture and Life Sciences, Kyungpook National University, Daegu 41566, Korea; [email protected] 3 The Institute for Cell and Molecular Biosciences, the Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne NE2 4HH, UK; [email protected] * Correspondence: [email protected]; Tel.: +81-(075)-753-4411 Received: 30 September 2019; Accepted: 26 October 2019; Published: 30 October 2019 Abstract: Type II DNA topoisomerase enzymes (TOP2) catalyze topological changes by strand passage reactions. They involve passing one intact double stranded DNA duplex through a transient enzyme-bridged break in another (gated helix) followed by ligation of the break by TOP2. A TOP2 poison, etoposide blocks TOP2 catalysis at the ligation step of the enzyme-bridged break, increasing the number of stable TOP2 cleavage complexes (TOP2ccs). Remarkably, such pathological TOP2ccs are formed during the normal cell cycle as well as in postmitotic cells. Thus, this ‘abortive catalysis’ can be a major source of spontaneously arising DNA double-strand breaks (DSBs). -
A Protein Kinase Activity Tightly Associated with Drosophila Type II
Proc. Nati. Acad. Sci. USA Vol. 81, pp. 6938-6942, November 1984 Biochemistry A protein kinase activity tightly associated with Drosophila type II DNA topoisomerase (eukaryotic topoisomerase/protein phosphorylation/Drosophila melanogaster) MIRIAM SANDER, JAMES M. NOLAN, AND TAO-SHIH HSIEH Department of Biochemistry, Duke University Medical Center, Durham, NC 27710 Communicated by Robert L. Hill, July 19, 1984 ABSTRACT A protein kinase activity has been identified tial gene. The mechanism by which the eukaryotic topoiso- that is tightly associated with the purified Drosophila type II merase activities are regulated is not yet clear. Since varia- DNA topoisomerase. The kinase and topoisomerase activities tions in chromatin structure are associated with the are not separated when the enzyme is subjected to analytical processes of transcription, replication, and cell division, it is chromatography (phosphoceilulose, single-strand DNA aga- likely that topoisomerase-mediated alteration in chromatin rose, and Sephacryl S-300) and analytical glycerol gradient structure will be regulated in a complex manner. sedimentation. These two activities are also inactivated to the Recently, a type I topoisomerase isolated from Novikoff same extent by either heat or N-ethylmaleimide treatment. hepatoma cells has been shown to be a phosphoprotein (15). The evidence, however, does not rule out the possibility that In our studies on Drosophila type II topoisomerase we have the kinase activity resides in a polypeptide other than the to- established that the enzyme isolated from the Kco Drosophi- poisomerase polypeptide. The topoisomerase-associated pro- la cell culture line is present in a phosphorylated form (un- tein kinase activity is not stimulated by Ca21 or cyclic nucleo- published data). -
Direct Control of Type IIA Topoisomerase Activity by a Chromosomally Encoded Regulatory Protein
Direct control of type IIA topoisomerase activity by a chromosomally encoded regulatory protein Seychelle M. Vos,1,4 Artem Y. Lyubimov,1,5 David M. Hershey,2 Allyn J. Schoeffler,1,6 Sugopa Sengupta,3,7 Valakunja Nagaraja,3 and James M. Berger1,8,9 1Department of Molecular and Cell Biology, 2Deparment of Plant and Microbial Biology, University of California at Berkeley, Berkeley, California 94720, USA; 3Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560 012, India Precise control of supercoiling homeostasis is critical to DNA-dependent processes such as gene expression, replication, and damage response. Topoisomerases are central regulators of DNA supercoiling commonly thought to act independently in the recognition and modulation of chromosome superstructure; however, recent evidence has indicated that cells tightly regulate topoisomerase activity to support chromosome dynamics, transcriptional response, and replicative events. How topoisomerase control is executed and linked to the internal status of a cell is poorly understood. To investigate these connections, we determined the structure of Escherichia coli gyrase, a type IIA topoisomerase bound to YacG, a recently identified chromosomally encoded inhibitor protein. Phylogenetic analyses indicate that YacG is frequently associated with coenzyme A (CoA) production enzymes, linking the protein to metabolism and stress. The structure, along with supporting solution studies, shows that YacG represses gyrase by sterically occluding the principal DNA-binding site of the enzyme. Unexpectedly, YacG acts by both engaging two spatially segregated regions associated with small-molecule inhibitor interactions (fluoroquinolone antibiotics and the newly reported antagonist GSK299423) and remodeling the gyrase holoenzyme into an inactive, ATP-trapped configuration. -
Structural Basis for the Allosteric Regulation of Human Topoisomerase 2Α
bioRxiv preprint doi: https://doi.org/10.1101/2020.08.23.263558; this version posted August 24, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Structural basis for the allosteric regulation of Human Topoisomerase 2α 2 Authors: Arnaud Vanden Broeck 1, 2, Christophe Lotz 1, 2, Robert Drillien 1, 2, Claire Bedez 1, 2 & 3 Valérie Lamour 1, 2, 3 * 4 1 Université de Strasbourg, CNRS, INSERM, Institut de Génétique et de Biologie Moléculaire et Cellulaire 5 (IGBMC), UMR 7104, U1258, IllkircH, France 6 2 Department of Integrated Structural Biology, IGBMC, 1 Rue Laurent Fries, 67404, IllkircH Cedex, France 7 3 Hôpitaux Universitaires de Strasbourg, 1 Place de l’Hôpital, 67091, Strasbourg Cedex, France 8 * Correspondence to Valérie Lamour, [email protected] 9 10 Abstract 11 The human type IIA topoisomerases (Top2) are essential enzymes that regulate DNA topology and 12 chromosome organization. The Top2a isoform is a prime target for antineoplastic compounds used in 13 cancer therapy that form ternary cleavage complexes with the DNA. Despite extensive studies, 14 structural information on this large dimeric assembly is limited to the catalytic domains, hindering the 15 exploration of allosteric mechanism governing the enzyme activities and the contribution of its non- 16 conserved C-terminal domain (CTD). Herein we present cryo-EM structures of the entire human 17 Top2α nucleoprotein complex in different conformations solved at subnanometer resolutions. Our data 18 unveils the molecular determinants that fine tune the allosteric connections between the ATPase 19 domain and the DNA binding/cleavage domain. -
Trapping of the Transport-Segment DNA by the Atpase Domains of a Type II Topoisomerase
ARTICLE DOI: 10.1038/s41467-018-05005-x OPEN Trapping of the transport-segment DNA by the ATPase domains of a type II topoisomerase Ivan Laponogov1,2,3, Xiao-Su Pan2, Dennis A. Veselkov1, Galyna B. Skamrova1, Trishant R. Umrekar 1,4, L. Mark Fisher 2 & Mark R. Sanderson 1 Type II topoisomerases alter DNA topology to control DNA supercoiling and chromosome segregation and are targets of clinically important anti-infective and anticancer therapeutics. 1234567890():,; They act as ATP-operated clamps to trap a DNA helix and transport it through a transient break in a second DNA. Here, we present the first X-ray crystal structure solved at 2.83 Å of a closed clamp complete with trapped T-segment DNA obtained by co-crystallizing the ATPase domain of S. pneumoniae topoisomerase IV with a nonhydrolyzable ATP analogue and 14-mer duplex DNA. The ATPase dimer forms a 22 Å protein hole occupied by the kinked DNA bound asymmetrically through positively charged residues lining the hole, and whose mutagenesis impacts the DNA decatenation, DNA relaxation and DNA-dependent ATPase activities of topo IV. These results and a side-bound DNA-ParE structure help explain how the T-segment DNA is captured and transported by a type II topoisomerase, and reveal a new enzyme–DNA interface for drug discovery. 1 Randall Centre for Cell and Molecular Biophysics, 3rd Floor New Hunt’s House, Faculty of Life Sciences and Medicine, King’s College London, London SE1 1UL, UK. 2 Molecular and Clinical Sciences Research Institute, St. George’s, University of London, Cranmer Terrace, London SW17 0RE, UK.