A peer-reviewed version of this preprint was published in PeerJ on 6 August 2019. View the peer-reviewed version (peerj.com/articles/7346), which is the preferred citable publication unless you specifically need to cite this preprint. Sabbagh CRR, Carrere S, Lonjon F, Vailleau F, Macho AP, Genin S, Peeters N. 2019. Pangenomic type III effector database of the plant pathogenic Ralstonia spp. PeerJ 7:e7346 https://doi.org/10.7717/peerj.7346 Pangenomic type III effector database of the plant pathogenic Ralstonia spp. Cyrus Raja Rubenstein Sabbagh Equal first author, 1 , Sébastien Carrère Equal first author, 1 , Fabien Lonjon 2 , Fabienne Vailleau 1 , Alberto P Macho 3 , Stephane Genin 1 , Nemo Peeters Corresp. 1 1 LIPM, Université de Toulouse, INRA, CNRS, Castanet-tolosan, France 2 Department of Cell & Systems Biology, University of Toronto, Toronto, Canada 3 Shanghai center for plant stress biology, CAS Center for Excellence in Molecular Plant Sciences, Shanghai Institutes of Biological Sciences, Chinese Academy of Sciences, Shanghai, China Corresponding Author: Nemo Peeters Email address:
[email protected] Background. The bacterial plant pathogenic Ralstonia species belong to the beta- proteobacteria order and are soil-borne pathogens causing the vascular bacterial wilt disease, affecting a wide range of plant hosts. These bacteria form a heterogeneous group considered as a “species complex”,” gathering three newly defined species. Like many other Gram negative plant pathogens, Ralstonia pathogenicity relies on a type III secretion system, enabling bacteria to secrete/inject a large repertoire of type III effectors into their plant host cells. T3Es are thought to participate in generating a favorable environment for the pathogen (countering plant immunity and modifying the host metabolism and physiology).