Convergent Evolution of the Army Ant Syndrome and Congruence in Big-Data Phylogenetics – Supplementary Figures and Tables
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Check List 8(4): 722–730, 2012 © 2012 Check List and Authors Chec List ISSN 1809-127X (Available at Journal of Species Lists and Distribution
Check List 8(4): 722–730, 2012 © 2012 Check List and Authors Chec List ISSN 1809-127X (available at www.checklist.org.br) Journal of species lists and distribution Check list of ground-dwelling ants (Hymenoptera: PECIES S Formicidae) of the eastern Acre, Amazon, Brazil OF Patrícia Nakayama Miranda 1,2*, Marco Antônio Oliveira 3, Fabricio Beggiato Baccaro 4, Elder Ferreira ISTS 1 5,6 L Morato and Jacques Hubert Charles Delabie 1 Universidade Federal do Acre, Centro de Ciências Biológicas e da Natureza. BR 364 – Km 4 – Distrito Industrial. CEP 69915-900. Rio Branco, AC, Brazil. 2 Instituo Federal do Acre, Campus Rio Branco. Avenida Brasil 920, Bairro Xavier Maia. CEP 69903-062. Rio Branco, AC, Brazil. 3 Universidade Federal de Viçosa, Campus Florestal. Rodovia LMG 818, Km 6. CEP 35690-000. Florestal, MG, Brazil. 4 Instituto Nacional de Pesquisas da Amazônia, Programa de Pós-graduação em Ecologia. CP 478. CEP 69083-670. Manaus, AM, Brazil. 5 Comissão Executiva do Plano da Lavoura Cacaueira, Centro de Pesquisas do Cacau, Laboratório de Mirmecologia – CEPEC/CEPLAC. Caixa Postal 07. CEP 45600-970. Itabuna, BA, Brazil. 6 Universidade Estadual de Santa Cruz. CEP 45650-000. Ilhéus, BA, Brazil. * Corresponding author. E-mail: [email protected] Abstract: The ant fauna of state of Acre, Brazilian Amazon, is poorly known. The aim of this study was to compile the species sampled in different areas in the State of Acre. An inventory was carried out in pristine forest in the municipality of Xapuri. This list was complemented with the information of a previous inventory carried out in a forest fragment in the municipality of Senador Guiomard and with a list of species deposited at the Entomological Collection of National Institute of Amazonian Research– INPA. -
Digging Deeper Into the Ecology of Subterranean Ants: Diversity and Niche Partitioning Across Two Continents
diversity Article Digging Deeper into the Ecology of Subterranean Ants: Diversity and Niche Partitioning across Two Continents Mickal Houadria * and Florian Menzel Institute of Organismic and Molecular Evolution, Johannes-Gutenberg-University Mainz, Hanns-Dieter-Hüsch-Weg 15, 55128 Mainz, Germany; [email protected] * Correspondence: [email protected] Abstract: Soil fauna is generally understudied compared to above-ground arthropods, and ants are no exception. Here, we compared a primary and a secondary forest each on two continents using four different sampling methods. Winkler sampling, pitfalls, and four types of above- and below-ground baits (dead, crushed insects; melezitose; living termites; living mealworms/grasshoppers) were applied on four plots (4 × 4 grid points) on each site. Although less diverse than Winkler samples and pitfalls, subterranean baits provided a remarkable ant community. Our baiting system provided a large dataset to systematically quantify strata and dietary specialisation in tropical rainforest ants. Compared to above-ground baits, 10–28% of the species at subterranean baits were overall more common (or unique to) below ground, indicating a fauna that was truly specialised to this stratum. Species turnover was particularly high in the primary forests, both concerning above-ground and subterranean baits and between grid points within a site. This suggests that secondary forests are more impoverished, especially concerning their subterranean fauna. Although subterranean ants rarely displayed specific preferences for a bait type, they were in general more specialised than above-ground ants; this was true for entire communities, but also for the same species if they foraged in both strata. Citation: Houadria, M.; Menzel, F. -
List of Indian Ants (Hymenoptera: Formicidae) Himender Bharti
List of Indian Ants (Hymenoptera: Formicidae) Himender Bharti Department of Zoology, Punjabi University, Patiala, India - 147002. (email: [email protected]/[email protected]) (www.antdiversityindia.com) Abstract Ants of India are enlisted herewith. This has been carried due to major changes in terms of synonymies, addition of new taxa, recent shufflings etc. Currently, Indian ants are represented by 652 valid species/subspecies falling under 87 genera grouped into 12 subfamilies. Keywords: Ants, India, Hymenoptera, Formicidae. Introduction The following 652 valid species/subspecies of myrmecology. This species list is based upon the ants are known to occur in India. Since Bingham’s effort of many ant collectors as well as Fauna of 1903, ant taxonomy has undergone major myrmecologists who have published on the taxonomy changes in terms of synonymies, discovery of new of Indian ants and from inputs provided by taxa, shuffling of taxa etc. This has lead to chaotic myrmecologists from other parts of world. However, state of affairs in Indian scenario, many lists appeared the other running/dynamic list continues to appear on web without looking into voluminous literature on http://www.antweb.org/india.jsp, which is which has surfaced in last many years and currently periodically updated and contains information about the pace at which new publications are appearing in new/unconfirmed taxa, still to be published or verified. Subfamily Genus Species and subspecies Aenictinae Aenictus 28 Amblyoponinae Amblyopone 3 Myopopone -
THE TRUE ARMY ANTS of the INDO-AUSTRALIAN AREA (Hymenoptera: Formicidae: Dorylinae)
Pacific Insects 6 (3) : 427483 November 10, 1964 THE TRUE ARMY ANTS OF THE INDO-AUSTRALIAN AREA (Hymenoptera: Formicidae: Dorylinae) By Edward O. Wilson BIOLOGICAL LABORATORIES, HARVARD UNIVERSITY, CAMBRIDGE, MASS., U. S. A. Abstract: All of the known Indo-Australian species of Dorylinae, 4 in Dorylus and 34 in Aenictus, are included in this revision. Eight of the Aenictus species are described as new: artipus, chapmani, doryloides, exilis, huonicus, nganduensis, philiporum and schneirlai. Phylo genetic and numerical analyses resulted in the discarding of two extant subgenera of Aenictus (Typhlatta and Paraenictus) and the loose clustering of the species into 5 informal " groups" within the unified genus Aenictus. A consistency test for phylogenetic characters is discussed. The African and Indo-Australian doryline species are compared, and available information in the biology of the Indo-Australian species is summarized. The " true " army ants are defined here as equivalent to the subfamily Dorylinae. Not included are species of Ponerinae which have developed legionary behavior independently (see Wilson, E. O., 1958, Evolution 12: 24-31) or the subfamily Leptanillinae, which is very distinct and may be independent in origin. The Dorylinae are not as well developed in the Indo-Australian area as in Africa and the New World tropics. Dorylus itself, which includes the famous driver ants, is centered in Africa and sends only four species into tropical Asia. Of these, the most widespread reaches only to Java and the Celebes. Aenictus, on the other hand, is at least as strongly developed in tropical Asia and New Guinea as it is in Africa, with 34 species being known from the former regions and only about 15 from Africa. -
Ants (Hymenoptera: Fonnicidae) of Samoa!
Ants (Hymenoptera: Fonnicidae) of Samoa! James K Wetterer 2 and Donald L. Vargo 3 Abstract: The ants of Samoa have been well studied compared with those of other Pacific island groups. Using Wilson and Taylor's (1967) specimen records and taxonomic analyses and Wilson and Hunt's (1967) list of 61 ant species with reliable records from Samoa as a starting point, we added published, unpublished, and new records ofants collected in Samoa and updated taxonomy. We increased the list of ants from Samoa to 68 species. Of these 68 ant species, 12 species are known only from Samoa or from Samoa and one neighboring island group, 30 species appear to be broader-ranged Pacific natives, and 26 appear to be exotic to the Pacific region. The seven-species increase in the Samoan ant list resulted from the split of Pacific Tetramorium guineense into the exotic T. bicarinatum and the native T. insolens, new records of four exotic species (Cardiocondyla obscurior, Hypoponera opaciceps, Solenopsis geminata, and Tetramorium lanuginosum), and new records of two species of uncertain status (Tetramorium cf. grassii, tentatively considered a native Pacific species, and Monomorium sp., tentatively considered an endemic Samoan form). SAMOA IS AN ISLAND CHAIN in western island groups, prompting Wilson and Taylor Polynesia with nine inhabited islands and (1967 :4) to feel "confident that a nearly numerous smaller, uninhabited islands. The complete faunal list could be made for the western four inhabited islands, Savai'i, Apo Samoan Islands." Samoa is of particular in lima, Manono, and 'Upolu, are part of the terest because it is one of the easternmost independent country of Samoa (formerly Pacific island groups with a substantial en Western Samoa). -
Field Methods for the Study of Ants in Sugarcane Plantations in Southeastern Brazil
Ants in sugarcane plantations in Southeastern Brazil 651 Field methods for the study of ants in sugarcane plantations in Southeastern Brazil Débora Rodrigues de Souza1; Erich Stingel2; Luiz Carlos de Almeida2; Marco Antônio Lazarini2; Catarina de Bortoli Munhae3; Odair Correa Bueno3; Claudinei Rogério Archangelo4; Maria Santina de C. Morini1* 1 UMC/NCA – Lab. de Mirmecologia, Av. Dr. Cândido Xavier de Almeida e Souza, 200 – 08701-970 – Mogi das Cruzes, SP – Brasil. 2 CTC, Fazenda Santo Antônio, s/n°, C.P. 162 – 13400-970 – Piracicaba, SP – Brasil. 3 UNESP/Centro de Estudos de Insetos Sociais, Av. 24, 1515 – 13506-725 – Rio Claro, SP – Brasil. 4 Usina Nova América S/A Agrícola – R. 11 de junho, 246 – 19800-020 – Assis, SP – Brasil. *Corresponding author <[email protected]> ABSTRACT: The harvest of sugarcane is still traditionally done manually with the burning of straw in most cultivated areas in Brazil. However, burning has been gradually eliminated with the relatively recent use of mechanical harvesting. This will result in significant changes in the agroecosystem, as the straw will remain in the field. No investigation on Formicidae found in sugarcane plantations in Southeastern Brazil harvested by this new system has been done yet. Because of their feeding habits, many species of this family may act as predators of several sugarcane pests. In this study, the sampling efficacy of pitfall traps, baits, and underground traps with two types of attractants were evaluated. Pitfall traps gave the largest richness, while abundance was the highest from baiting. Community composition and structure differed in relation to the sampling methods used. -
Sistemática Y Ecología De Las Hormigas Predadoras (Formicidae: Ponerinae) De La Argentina
UNIVERSIDAD DE BUENOS AIRES Facultad de Ciencias Exactas y Naturales Sistemática y ecología de las hormigas predadoras (Formicidae: Ponerinae) de la Argentina Tesis presentada para optar al título de Doctor de la Universidad de Buenos Aires en el área CIENCIAS BIOLÓGICAS PRISCILA ELENA HANISCH Directores de tesis: Dr. Andrew Suarez y Dr. Pablo L. Tubaro Consejero de estudios: Dr. Daniel Roccatagliata Lugar de trabajo: División de Ornitología, Museo Argentino de Ciencias Naturales “Bernardino Rivadavia” Buenos Aires, Marzo 2018 Fecha de defensa: 27 de Marzo de 2018 Sistemática y ecología de las hormigas predadoras (Formicidae: Ponerinae) de la Argentina Resumen Las hormigas son uno de los grupos de insectos más abundantes en los ecosistemas terrestres, siendo sus actividades, muy importantes para el ecosistema. En esta tesis se estudiaron de forma integral la sistemática y ecología de una subfamilia de hormigas, las ponerinas. Esta subfamilia predomina en regiones tropicales y neotropicales, estando presente en Argentina desde el norte hasta la provincia de Buenos Aires. Se utilizó un enfoque integrador, combinando análisis genéticos con morfológicos para estudiar su diversidad, en combinación con estudios ecológicos y comportamentales para estudiar la dominancia, estructura de la comunidad y posición trófica de las Ponerinas. Los resultados sugieren que la diversidad es más alta de lo que se creía, tanto por que se encontraron nuevos registros durante la colecta de nuevo material, como porque nuestros análisis sugieren la presencia de especies crípticas. Adicionalmente, demostramos que en el PN Iguazú, dos ponerinas: Dinoponera australis y Pachycondyla striata son componentes dominantes en la comunidad de hormigas. Análisis de isótopos estables revelaron que la mayoría de las Ponerinas ocupan niveles tróficos altos, con excepción de algunas especies arborícolas del género Neoponera que dependerían de néctar u otros recursos vegetales. -
Taxonomic Classification of Ants (Formicidae)
bioRxiv preprint doi: https://doi.org/10.1101/407452; this version posted September 4, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Taxonomic Classification of Ants (Formicidae) from Images using Deep Learning Marijn J. A. Boer1 and Rutger A. Vos1;∗ 1 Endless Forms, Naturalis Biodiversity Center, Leiden, 2333 BA, Netherlands *[email protected] Abstract 1 The well-documented, species-rich, and diverse group of ants (Formicidae) are important 2 ecological bioindicators for species richness, ecosystem health, and biodiversity, but ant 3 species identification is complex and requires specific knowledge. In the past few years, 4 insect identification from images has seen increasing interest and success, with processing 5 speed improving and costs lowering. Here we propose deep learning (in the form of a 6 convolutional neural network (CNN)) to classify ants at species level using AntWeb 7 images. We used an Inception-ResNet-V2-based CNN to classify ant images, and three 8 shot types with 10,204 images for 97 species, in addition to a multi-view approach, for 9 training and testing the CNN while also testing a worker-only set and an AntWeb 10 protocol-deviant test set. Top 1 accuracy reached 62% - 81%, top 3 accuracy 80% - 92%, 11 and genus accuracy 79% - 95% on species classification for different shot type approaches. 12 The head shot type outperformed other shot type approaches. -
Hymenoptera: Formicidae) Along an Elevational Gradient at Eungella in the Clarke Range, Central Queensland Coast, Australia
RAINFOREST ANTS (HYMENOPTERA: FORMICIDAE) ALONG AN ELEVATIONAL GRADIENT AT EUNGELLA IN THE CLARKE RANGE, CENTRAL QUEENSLAND COAST, AUSTRALIA BURWELL, C. J.1,2 & NAKAMURA, A.1,3 Here we provide a faunistic overview of the rainforest ant fauna of the Eungella region, located in the southern part of the Clarke Range in the Central Queensland Coast, Australia, based on systematic surveys spanning an elevational gradient from 200 to 1200 m asl. Ants were collected from a total of 34 sites located within bands of elevation of approximately 200, 400, 600, 800, 1000 and 1200 m asl. Surveys were conducted in March 2013 (20 sites), November 2013 and March–April 2014 (24 sites each), and ants were sampled using five methods: pitfall traps, leaf litter extracts, Malaise traps, spray- ing tree trunks with pyrethroid insecticide, and timed bouts of hand collecting during the day. In total we recorded 142 ant species (described species and morphospecies) from our systematic sampling and observed an additional species, the green tree ant Oecophylla smaragdina, at the lowest eleva- tions but not on our survey sites. With the caveat of less sampling intensity at the lowest and highest elevations, species richness peaked at 600 m asl (89 species), declined monotonically with increasing and decreasing elevation, and was lowest at 1200 m asl (33 spp.). Ant species composition progres- sively changed with increasing elevation, but there appeared to be two gradients of change, one from 200–600 m asl and another from 800 to 1200 m asl. Differences between the lowland and upland faunas may be driven in part by a greater representation of tropical and arboreal-nesting sp ecies in the lowlands and a greater representation of subtropical species in the highlands. -
Integrating Taxonomic Approaches to Assess Ant Diversity at the Southern Extreme of the Atlantic Forest
Received: 19 May 2017 | Revised: 12 September 2017 | Accepted: 14 September 2017 DOI: 10.1002/ece3.3549 ORIGINAL RESEARCH Mind the gap! Integrating taxonomic approaches to assess ant diversity at the southern extreme of the Atlantic Forest Priscila Elena Hanisch1 | Pablo D. Lavinia1 | Andrew V. Suarez2 | Darío Alejandro Lijtmaer1 | Maurice Leponce3 | Carolina Ivon Paris4 | Pablo Luis Tubaro1 1Museo Argentino de Ciencias Naturales “Bernardino Rivadavia” MACN-CONICET, Abstract Buenos Aires, Argentina Understanding patterns of species diversity relies on accurate taxonomy which can 2 Department of Entomology and Department only be achieved by long- term natural history research and the use of complementary of Animal Biology, University of Illinois, Urbana, USA information to establish species boundaries among cryptic taxa. We used DNA bar- 3Aquatic and Terrestrial Ecology unit, Royal coding to characterize the ant diversity of Iguazú National Park (INP), a protected area Belgian Institute of Natural Sciences, Brussels, of the Upper Paraná Atlantic Forest ecoregion, located at the southernmost extent of Belgium 4Departamento Ecología, Genética y this forest. We assessed ant diversity using both cytochrome c oxidase subunit 1 (COI) Evolución, Universidad de Buenos Aires, sequences and traditional morphological approaches, and compared the results of Buenos Aires, Argentina these two methods. We successfully obtained COI sequences for 312 specimens Correspondence belonging to 124 species, providing a DNA barcode reference library for nearly 50% of Priscila E Hanisch, Museo Argentino de Ciencias Naturales “Bernardino Rivadavia” the currently known ant fauna of INP. Our results support a clear barcode gap for all MACN-CONICET, Buenos Aires, Argentina. but two species, with a mean intraspecific divergence of 0.72%, and an average con- Email: [email protected] generic distance of 17.25%. -
Convergent Evolution of the Army Ant Syndrome and Congruence in Big-Data Phylogenetics
bioRxiv preprint doi: https://doi.org/10.1101/134064; this version posted May 4, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Convergent evolution of the army ant syndrome and congruence in big-data phylogenetics Marek L. Borowiec Department of Entomology and Nematology, One Shields Avenue, University of California at Davis, Davis, California, 95616, USA Current address: School of Life Sciences, Social Insect Research Group, Arizona State University, Tempe, Arizona, 85287, USA E-mail: [email protected] Abstract The evolution of the suite of morphological and behavioral adaptations underlying the eco- logical success of army ants has been the subject of considerable debate. This ”army ant syn- drome” has been argued to have arisen once or multiple times within the ant subfamily Do- rylinae. To address this question I generated data from 2,166 loci and a comprehensive taxon sampling for a phylogenetic investigation. Most analyses show strong support for convergent evolution of the army ant syndrome in the Old and New World but certain relationships are sensitive to analytics. I examine the signal present in this data set and find that conflict is di- minished when only loci less likely to violate common phylogenetic model assumptions are considered. I also provide a temporal and spatial context for doryline evolution with time- calibrated, biogeographic, and diversification rate shift analyses. This study underscores the need for cautious analysis of phylogenomic data and calls for more efficient algorithms em- ploying better-fitting models of molecular evolution. -
Convergent Evolution of the Army Ant Syndrome and Congruence in Big-Data Phylogenetics
Copyedited by: YS MANUSCRIPT CATEGORY: Systematic Biology Syst. Biol. 68(4):642–656, 2019 © The Author(s) 2019. Published by Oxford University Press, on behalf of the Society of Systematic Biologists. All rights reserved. For permissions, please email: [email protected] DOI:10.1093/sysbio/syy088 Advance Access publication January 3, 2019 Convergent Evolution of the Army Ant Syndrome and Congruence in Big-Data Phylogenetics , , ,∗ MAREK L. BOROWIEC1 2 3 1Department of Entomology, Plant Pathology and Nematology, 875 Perimeter Drive, University of Idaho, Moscow, ID 83844, USA; 2School of Life Sciences, Social Insect Research Group, Arizona State University, Tempe, AZ 85287, USA; and 3Department of Entomology and Nematology, One Shields Avenue, University of California at Davis, Davis, CA 95616, USA ∗ Correspondence to be sent to: Department of Entomology, Plant Pathology and Nematology, 875 Perimeter Drive, University of Idaho, Moscow, ID 83844, USA; Downloaded from https://academic.oup.com/sysbio/article-abstract/68/4/642/5272507 by Arizona State University West 2 user on 24 July 2019 E-mail: [email protected]. Received 24 May 2018; reviews returned 9 November 2018; accepted 15 December 2018 Associate Editor: Brian Wiegmann Abstract.—Army ants are a charismatic group of organisms characterized by a suite of morphological and behavioral adaptations that includes obligate collective foraging, frequent colony relocation, and highly specialized wingless queens. This army ant syndrome underlies the ecological success of army ants and its evolution has been the subject of considerable debate. It has been argued to have arisen once or multiple times within the ant subfamily Dorylinae. To address this question in a phylogenetic framework I generated data from 2166 loci and a comprehensive taxon sampling representing all 27 genera and 155 or approximately 22% of doryline species.