A Dynamic Approach to the Study of Rhodoliths: a Case Study for the Northwestern Gulf of Mexico
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Three Challenges to Contemporaneous Taxonomy from a Licheno-Mycological Perspective
Megataxa 001 (1): 078–103 ISSN 2703-3082 (print edition) https://www.mapress.com/j/mt/ MEGATAXA Copyright © 2020 Magnolia Press Review ISSN 2703-3090 (online edition) https://doi.org/10.11646/megataxa.1.1.16 Three challenges to contemporaneous taxonomy from a licheno-mycological perspective ROBERT LÜCKING Botanischer Garten und Botanisches Museum, Freie Universität Berlin, Königin-Luise-Straße 6–8, 14195 Berlin, Germany �[email protected]; https://orcid.org/0000-0002-3431-4636 Abstract Nagoya Protocol, and does not need additional “policing”. Indeed, the Nagoya Protocol puts the heaviest burden on This paper discusses three issues that challenge contempora- taxonomy and researchers cataloguing biodiversity, whereas neous taxonomy, with examples from the fields of mycology for the intended target group, namely those seeking revenue and lichenology, formulated as three questions: (1) What is gain from nature, the protocol may not actually work effec- the importance of taxonomy in contemporaneous and future tively. The notion of currently freely accessible digital se- science and society? (2) An increasing methodological gap in quence information (DSI) to become subject to the protocol, alpha taxonomy: challenge or opportunity? (3) The Nagoya even after previous publication, is misguided and conflicts Protocol: improvement or impediment to the science of tax- with the guidelines for ethical scientific conduct. Through onomy? The importance of taxonomy in society is illustrated its implementation of the Nagoya Protocol, Colombia has using the example of popular field guides and digital me- set a welcome precedence how to exempt taxonomic and dia, a billion-dollar business, arguing that the desire to name systematic research from “access to genetic resources”, and species is an intrinsic feature of the cognitive component of hopefully other biodiversity-rich countries will follow this nature connectedness of humans. -
Succession of Crustose Coralline Red Algae (Rhodophyta) on Coralgal Reefs Exposed to Physical Disturbance in the Southwest Atlantic
Helgol Mar Res (2013) 67:687–696 DOI 10.1007/s10152-013-0354-3 ORIGINAL ARTICLE Succession of crustose coralline red algae (Rhodophyta) on coralgal reefs exposed to physical disturbance in the southwest Atlantic Rodrigo Mariath • Rafael Riosmena Rodriguez • Marcia A. O. Figueiredo Received: 4 November 2011 / Revised: 25 February 2013 / Accepted: 3 April 2013 / Published online: 14 May 2013 Ó Springer-Verlag Berlin Heidelberg and AWI 2013 Abstract Biological and physical disturbances create the abundant. Physical disturbance increased crust recruitment conditions for species succession in any biological eco- and the low-light environment created by sediments. The system. In particular, coral reefs are susceptible to this data demonstrated coexistence among crustose coralline process because of the complexity of their ecological species and a tolerance to physical disturbance, which relationships. In the southwest Atlantic, nearshore reefs are seemed to favor the thinner crusts of P. conicum over mostly coated by a thin layer of coralline crusts rather than thick-crust species during succession. The succession pat- stony corals. However, little is known about the succession tern observed in this subtropical Brazilian coral reef differs of crustose coralline algae. We studied this process by from that described for shallow tropical reef communities. means of a series of experimental and control discs exposed to physical disturbance. Our results showed that Keywords CCA Á Coral reef Á Benthic communities Á the dominant species in natural conditions, Pneophyllum Brazil conicum, had early recruits and later became dominant on the discs, replicating the community structure of the actual reef. This species had mature reproductive structures and Introduction available spores from the beginning of the colonization experiments. -
Tropical Coralline Algae (Diurnal Response)
Burdett, Heidi L. (2013) DMSP dynamics in marine coralline algal habitats. PhD thesis. http://theses.gla.ac.uk/4108/ Copyright and moral rights for this thesis are retained by the author A copy can be downloaded for personal non-commercial research or study This thesis cannot be reproduced or quoted extensively from without first obtaining permission in writing from the Author The content must not be changed in any way or sold commercially in any format or medium without the formal permission of the Author When referring to this work, full bibliographic details including the author, title, awarding institution and date of the thesis must be given Glasgow Theses Service http://theses.gla.ac.uk/ [email protected] DMSP Dynamics in Marine Coralline Algal Habitats Heidi L. Burdett MSc BSc (Hons) University of Plymouth Submitted in fulfilment of the requirements for the Degree of Doctor of Philosophy School of Geographical and Earth Sciences College of Science and Engineering University of Glasgow March 2013 © Heidi L. Burdett, 2013 ii Dedication In loving memory of my Grandads; you may not get to see this in person, but I hope it makes you proud nonetheless. John Hewitson Burdett 1917 – 2012 and Denis McCarthy 1923 - 1998 Heidi L. Burdett March 2013 iii Abstract Dimethylsulphoniopropionate (DMSP) is a dimethylated sulphur compound that appears to be produced by most marine algae and is a major component of the marine sulphur cycle. The majority of research to date has focused on the production of DMSP and its major breakdown product, the climatically important gas dimethylsulphide (DMS) (collectively DMS/P), by phytoplankton in the open ocean. -
Brazilian Journal of Oceanography V Olume 64 Special Issue 2
Brazilian Journal of Oceanography Volume 64 Special Issue 2 P. 1-156 2016 CONTENTS BRAZILIAN JOURNAL OF OCEANOGRAPHY Editorial 1 Turra A.; Denadai M.R.; Brazilian sandy beaches: characteristics, ecosystem services, impacts, knowledge and priorities 5 Amaral A.C.Z.; Corte G.N.; Rosa Filho J.S.; Denadai M.R.; Colling L.A.; Borzone C.; Veloso V.; Omena E.P.; Zalmon I.R.; Rocha-Barreira C.A.; Souza J.R.B.; Rosa L.C.; Tito Cesar Marques de Almeida State of the art of the meiofauna of Brazilian Sandy Beaches 17 Maria T.F.; Wandeness A.P.; Esteves A.M. Studies on benthic communities of rocky shores on the Brazilian coast and climate change monitoring: status of 27 knowledge and challenges Coutinho R.; Yaginuma L.E.; Siviero F.; dos Santos J.C.Q.P.; López M.S.; Christofoletti R.A.; Berchez F.; Ghilardi-Lopes N.P.; Ferreira C.E.L.; Gonçalves J.E.A.; Masi B.P.; Correia M.D.; Sovierzoski H.H.; Skinner L.F.; Zalmon I.R. Climate changes in mangrove forests and salt marshes 37 Schaeffer-Novelli Y.; Soriano-Sierra E.J.; Vale C.C.; Bernini E.; Rovai A.S.; Pinheiro M.A.A.; Schmidt A.J.; Almeida R.; Coelho Júnior C.; Menghini R.P.; Martinez D.I.; Abuchahla G.M.O.; Cunha-Lignon M.; Charlier-Sarubo S.; Shirazawa-Freitas J.; Gilberto Cintrón-Molero G. Seagrass and Submerged Aquatic Vegetation (VAS) Habitats off the Coast of Brazil: state of knowledge, conservation and 53 main threats Copertino M.S.; Creed J.C.; Lanari M.O.; Magalhães K.; Barros K.; Lana P.C.; Sordo L.; Horta P.A. -
Biodiversity of Kelp Forests and Coralline Algae Habitats in Southwestern Greenland
diversity Article Biodiversity of Kelp Forests and Coralline Algae Habitats in Southwestern Greenland Kathryn M. Schoenrock 1,2,* , Johanne Vad 3,4, Arley Muth 5, Danni M. Pearce 6, Brice R. Rea 7, J. Edward Schofield 7 and Nicholas A. Kamenos 1 1 School of Geographical and Earth Sciences, University of Glasgow, Gregory Building, Lilybank Gardens, Glasgow G12 8QQ, UK; [email protected] 2 Botany and Plant Science, National University of Ireland Galway, Ryan Institute, University Rd., H91 TK33 Galway, Ireland 3 School of Engineering, Geosciences, Infrastructure and Society, Heriot-Watt University, Riccarton Campus, Edinburgh EH14 4AS, UK; [email protected] 4 School of Geosciences, Grant Institute, University of Edinburgh, Edinburgh EH28 8, UK 5 Marine Science Institute, The University of Texas at Austin, College of Natural Sciences, 750 Channel View Drive, Port Aransas, TX 78373-5015, USA; [email protected] 6 Department of Biological and Environmental Sciences, School of Life and Medical Sciences, University of Hertfordshire, Hatfield, Hertfordshire AL10 9AB, UK; [email protected] 7 Geography & Environment, School of Geosciences, University of Aberdeen, Elphinstone Road, Aberdeen AB24 3UF, UK; [email protected] (B.R.R.); j.e.schofi[email protected] (J.E.S.) * Correspondence: [email protected]; Tel.: +353-87-637-2869 Received: 22 August 2018; Accepted: 22 October 2018; Published: 25 October 2018 Abstract: All marine communities in Greenland are experiencing rapid environmental change, and to understand the effects on those structured by seaweeds, baseline records are vital. The kelp and coralline algae habitats along Greenland’s coastlines are rarely studied, and we fill this knowledge gap for the area around Nuuk, west Greenland. -
An Account of Common Crustose Coralline Algae
D.I. Walker and F.E. Wells (Eds) 1999. The Seagrass Flora and Fauna of Rottnest Island, Western Australia. Western Australian Museum, Perth. CORE An account of common crustose coralline algae Metadata, citation and similar papers at core.ac.uk Provided(Corallinales, by Research Repository Rhodophyta) from macrophyte communities at Rottnest Island, Western Australia. by C.B. Sim Department of Botany, University of Western Australia, Nedlands, 6907, Western Australia and "' R.A. Townsend School of Biological Sciences and Biotechnology, Division of Science and Engineering, Murdoch University, Murdoch 6150, Western Australia ABSTRACT Meaningful interpretation of ecological experimentation can only be made after knowledge of the floral composition of an area is known. Crustose coralline algae have a reputation among phycologists as being a difficult group of organisms to identify to species level. Crustose coralline algae (Corallinales, Rhodophyta) cover the substratum in most macrophyte communities; their ecology is poorly understood. The aim of this work was to develop a species list and generic key for crustose coralline algae found in macrophyte communities around Rottnest Island, Western Australia. Eleven species belonging to seven genera were identified from limestone substrata in kelp and mixed macroalgal communities. A key to the common genera of crustose coralline algae found in these communities is also provided. The key, aimed at ecologists with limited knowledge of coralline taxonomy and anatomy, uses gross external and easily recognisable internal characters. The crustose coralline algal flora of Rottnest Island is a mixture of Indo-West Pacific and southern temperate species. Species such as Hydrolithon onkodes which has an extensive tropical and subtropical range were found at most sites sampled. -
Effects of Coral Reef Benthic Primary Producers on Dissolved Organic Carbon and Microbial Activity
Effects of Coral Reef Benthic Primary Producers on Dissolved Organic Carbon and Microbial Activity Andreas F. Haas1*, Craig E. Nelson2, Linda Wegley Kelly3, Craig A. Carlson2,4, Forest Rohwer3, James J. Leichter1, Alex Wyatt1, Jennifer E. Smith1 1 Scripps Institution of Oceanography, University of California San Diego, San Diego, California, United States of America, 2 Marine Science Institute, University of California Santa Barbara, Santa Barbara, California, United States of America, 3 Department of Biology, San Diego State University, San Diego, California, United States of America, 4 Department of Ecology, Evolution and Marine Biology, University of California Santa Barbara, Santa Barbara, California, United States of America Abstract Benthic primary producers in marine ecosystems may significantly alter biogeochemical cycling and microbial processes in their surrounding environment. To examine these interactions, we studied dissolved organic matter release by dominant benthic taxa and subsequent microbial remineralization in the lagoonal reefs of Moorea, French Polynesia. Rates of photosynthesis, respiration, and dissolved organic carbon (DOC) release were assessed for several common benthic reef organisms from the backreef habitat. We assessed microbial community response to dissolved exudates of each benthic producer by measuring bacterioplankton growth, respiration, and DOC drawdown in two-day dark dilution culture incubations. Experiments were conducted for six benthic producers: three species of macroalgae (each representing a different algal phylum: Turbinaria ornata – Ochrophyta; Amansia rhodantha – Rhodophyta; Halimeda opuntia – Chlorophyta), a mixed assemblage of turf algae, a species of crustose coralline algae (Hydrolithon reinboldii) and a dominant hermatypic coral (Porites lobata). Our results show that all five types of algae, but not the coral, exuded significant amounts of labile DOC into their surrounding environment. -
Inventory and Atlas of Corals and Coral Reefs, with Emphasis on Deep-Water Coral Reefs from the U
Inventory and Atlas of Corals and Coral Reefs, with Emphasis on Deep-Water Coral Reefs from the U. S. Caribbean EEZ Jorge R. García Sais SEDAR26-RD-02 FINAL REPORT Inventory and Atlas of Corals and Coral Reefs, with Emphasis on Deep-Water Coral Reefs from the U. S. Caribbean EEZ Submitted to the: Caribbean Fishery Management Council San Juan, Puerto Rico By: Dr. Jorge R. García Sais dba Reef Surveys P. O. Box 3015;Lajas, P. R. 00667 [email protected] December, 2005 i Table of Contents Page I. Executive Summary 1 II. Introduction 4 III. Study Objectives 7 IV. Methods 8 A. Recuperation of Historical Data 8 B. Atlas map of deep reefs of PR and the USVI 11 C. Field Study at Isla Desecheo, PR 12 1. Sessile-Benthic Communities 12 2. Fishes and Motile Megabenthic Invertebrates 13 3. Statistical Analyses 15 V. Results and Discussion 15 A. Literature Review 15 1. Historical Overview 15 2. Recent Investigations 22 B. Geographical Distribution and Physical Characteristics 36 of Deep Reef Systems of Puerto Rico and the U. S. Virgin Islands C. Taxonomic Characterization of Sessile-Benthic 49 Communities Associated With Deep Sea Habitats of Puerto Rico and the U. S. Virgin Islands 1. Benthic Algae 49 2. Sponges (Phylum Porifera) 53 3. Corals (Phylum Cnidaria: Scleractinia 57 and Antipatharia) 4. Gorgonians (Sub-Class Octocorallia 65 D. Taxonomic Characterization of Sessile-Benthic Communities 68 Associated with Deep Sea Habitats of Puerto Rico and the U. S. Virgin Islands 1. Echinoderms 68 2. Decapod Crustaceans 72 3. Mollusks 78 E. -
Seaweed and Seagrasses Inventory of Laguna De San Ignacio, BCS
UNIVERSIDAD AUTÓNOMA DE BAJA CALIFORNIA SUR ÁREA DE CONOCIMIENTO DE CIENCIAS DEL MAR DEPARTAMENTO ACADÉMICO DE BIOLOGÍA MARINA PROGRAMA DE INVESTIGACIÓN EN BOTÁNICA MARINA Seaweed and seagrasses inventory of Laguna de San Ignacio, BCS. Dr. Rafael Riosmena-Rodríguez y Dr. Juan Manuel López Vivas Programa de Investigación en Botánica Marina, Departamento de Biología Marina, Universidad Autónoma de Baja California Sur, Apartado postal 19-B, km. 5.5 carretera al Sur, La Paz B.C.S. 23080 México. Tel. 52-612-1238800 ext. 4140; Fax. 52-612-12800880; Email: [email protected]. Participants: Dr. Jorge Manuel López-Calderón, Dr. Carlos Sánchez Ortiz, Dr. Gerardo González Barba, Dr. Sung Min Boo, Dra. Kyung Min Lee, Hidrobiol. Carmen Mendez Trejo, M. en C. Nestor Manuel Ruíz Robinson, Pas Biol. Mar. Tania Cota. Periodo de reporte: Marzo del 2013 a Junio del 2014. Abstract: The present report presents the surveys of marine flora 2013 – 2014 in the San Ignacio Lagoon of the, representing the 50% of planned visits and in where we were able to identifying 19 species of macroalgae to the area plus 2 Seagrass traditionally cited. The analysis of the number of species / distribution of macroalgae and seagrass is in progress using an intense review of literature who will be concluded using the last field trip information in May-June 2014. During the last two years we have not been able to find large abundances of species of microalgae as were described since 2006 and the floristic lists developed in the 90's. This added with the presence to increase both coverage and biomass of invasive species which makes a real threat to consider. -
Rhodoliths and Rhodolith Beds Michael S
Rhodoliths and Rhodolith Beds Michael S. Foster, Gilberto M. Amado Filho, Nicholas A. Kamenos, Rafael Riosmena- Rodríguez, and Diana L. Steller ABSTRACT. Rhodolith (maërl) beds, communities dominated by free living coralline algae, are a common feature of subtidal environments worldwide. Well preserved as fossils, they have long been recognized as important carbonate producers and paleoenvironmental indicators. Coralline algae produce growth bands with a morphology and chemistry that record environmental varia- tion. Rhodoliths are hard but often fragile, and growth rates are only on the order of mm/yr. The hard, complex structure of living beds provides habitats for numerous associated species not found on otherwise entirely sedimentary bottoms. Beds are degraded locally by dredging and other an- thropogenic disturbances, and recovery is slow. They will likely suffer severe impacts worldwide from the increasing acidity of the ocean. Investigations of rhodolith beds with scuba have enabled precise stratified sampling that has shown the importance of individual rhodoliths as hot spots of diversity. Observations, collections, and experiments by divers have revolutionized taxonomic stud- ies by allowing comprehensive, detailed collection and by showing the large effects of the environ- ment on rhodolith morphology. Facilitated by in situ collection and calibrations, corallines are now contributing to paleoclimatic reconstructions over a broad range of temporal and spatial scales. Beds are particularly abundant in the mesophotic zone of the Brazilian shelf where technical diving has revealed new associations and species. This paper reviews selected past and present research on rhodoliths and rhodolith beds that has been greatly facilitated by the use of scuba. Michael S. Foster, Moss Landing Marine Labo- INTRODUCTION ratories, 8272 Moss Landing Road, Moss Land- ing, California 95039, USA. -
Eukaryotic Life Inhabits Rhodolith
www.nature.com/scientificreports OPEN Eukaryotic Life Inhabits Rhodolith-forming Coralline Algae (Hapalidiales, Rhodophyta), Received: 15 November 2016 Accepted: 03 March 2017 Remarkable Marine Benthic Published: 03 April 2017 Microhabitats Sherry Krayesky-Self1, William E. Schmidt1, Delena Phung1, Caroline Henry1, Thomas Sauvage1,2, Olga Camacho1, Bruce E. Felgenhauer1 & Suzanne Fredericq1 Rhodoliths are benthic calcium carbonate nodules accreted by crustose coralline red algae which recently have been identified as useful indicators of biomineral changes resulting from global climate change and ocean acidification. This study highlights the discovery that the interior of rhodoliths are marine biodiversity hotspots that function as seedbanks and temporary reservoirs of previously unknown stages in the life history of ecologically important dinoflagellate and haptophyte microalgae. Whereas the studied rhodoliths originated from offshore deep bank pinnacles in the northwestern Gulf of Mexico, the present study opens the door to assess the universality of endolithic stages among bloom-forming microalgae spanning different phyla, some of public health concerns (Prorocentrum) in marine ecosystems worldwide. Coralline red algae are calcifying multicellular seaweeds that are ubiquitous in marine ecosystems worldwide. Because they precipitate calcium carbonate within their organic cell walls as Ca(Mg)CO3, a highly soluble, high-magnesium calcite polymorph1–3, coralline red algae are currently popular experimental subjects of many ecological and mineralogical studies that address the potential effects of ocean acidification and global warming 2,4–6 on calcifying organisms . It is well known that the CaCO3 in the cell walls provides the coralline algae several advantages such as rigidity, skeletal strength, protection from grazing and boring animals, and enhanced sur- vivorship by increasing resistance to wave action7. -
ALGAE, CALCIFIED Zone from the Arctic to the Antarctic, from Temperate Regions to the Tropics
climatic fl uctuations infl uence the amount of nutrients Ochrophyta (red, green, and brown algae, respectively). that are brought up from the ocean’s depth and fuel the Today, calcifi ed algae dominate biotic communities in growth of all photosynthetic marine organisms. Changes in many subtidal, intertidal, and tidepool environments the abundance of phytoplankton or nutrients in the ocean worldwide. They build reefs, contribute to sediments, water that overlay seaweed-covered shores are likely to sig- and are home to numerous plants and animals. In sum, nifi cantly alter the ecological character of these shorelines. their unique attributes enable them to play key ecological The slippery and slimy seaweeds that can sometimes and geological roles in marine ecosystems. make walking along the shore at low tide a challenging affair are a fascinating yet often overlooked component THE DIVERSITY AND IMPORTANCE of healthy, functioning marine ecosystems. We know that OF CALCIFIED ALGAE many species depend upon seaweeds for food and habitat. Among the different groups of calcifi ed algae, the mode We know their moist cover provides a desirable refuge and extent of calcifi cation varies widely. For example, for many intertidal inhabitants during low tide. Despite the brown alga Padina develops a thin white calcifi ed the enormous productivity and diversity of seaweeds, coating, whereas the green alga Acetabularia and the red we still know surprisingly little about the contribution alga L iagora incorporate low concentrations of calcium that seaweeds make to coastal ecosystem production and carbonate directly into their fl exible thalli. Other, more functioning. The enormous diversity in form, life history, rigid but still fl exible, calcifi ed algae include the red alga ecology, and evolutionary history of seaweeds make them Galaxaura and the green algae Udotea and Penicillus.