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The Evolution and Genomic Basis of Beetle Diversity
The evolution and genomic basis of beetle diversity Duane D. McKennaa,b,1,2, Seunggwan Shina,b,2, Dirk Ahrensc, Michael Balked, Cristian Beza-Bezaa,b, Dave J. Clarkea,b, Alexander Donathe, Hermes E. Escalonae,f,g, Frank Friedrichh, Harald Letschi, Shanlin Liuj, David Maddisonk, Christoph Mayere, Bernhard Misofe, Peyton J. Murina, Oliver Niehuisg, Ralph S. Petersc, Lars Podsiadlowskie, l m l,n o f l Hans Pohl , Erin D. Scully , Evgeny V. Yan , Xin Zhou , Adam Slipinski , and Rolf G. Beutel aDepartment of Biological Sciences, University of Memphis, Memphis, TN 38152; bCenter for Biodiversity Research, University of Memphis, Memphis, TN 38152; cCenter for Taxonomy and Evolutionary Research, Arthropoda Department, Zoologisches Forschungsmuseum Alexander Koenig, 53113 Bonn, Germany; dBavarian State Collection of Zoology, Bavarian Natural History Collections, 81247 Munich, Germany; eCenter for Molecular Biodiversity Research, Zoological Research Museum Alexander Koenig, 53113 Bonn, Germany; fAustralian National Insect Collection, Commonwealth Scientific and Industrial Research Organisation, Canberra, ACT 2601, Australia; gDepartment of Evolutionary Biology and Ecology, Institute for Biology I (Zoology), University of Freiburg, 79104 Freiburg, Germany; hInstitute of Zoology, University of Hamburg, D-20146 Hamburg, Germany; iDepartment of Botany and Biodiversity Research, University of Wien, Wien 1030, Austria; jChina National GeneBank, BGI-Shenzhen, 518083 Guangdong, People’s Republic of China; kDepartment of Integrative Biology, Oregon State -
Sri Lanka Freshwater Namely the Cyclopoija Tfree Living and Parasite, Calanoida and Harpa::Ticoida
C. H. FERNANDO 53 Fig. 171 (contd: from page 52) Sphaericus for which an Ontario specimen was used. I have illustrated some of the head shields of Chydoridae. The study of Clackceran remains so commonly found in samples emLbles indonti:fication ,,f species which have been in the habita'~ besides those act_ive stages when the samples was collected. Males of Cladocera are rare but they are of considerable value in reaching accurate diagnoses of species. I have illustrated the few males I have .found in the samples. A more careful study of all the specimens will certainly give males of most s1)ecies sin00 ·bhe collections were made throughout the year. REFERRENCES APSTEIN, C. (1907)-Das plancton in Colombo see auf Ceylon. Zool. Jb. (Syst.) 25 :201-244. l\,J>STEJN, C. (1910)-Das plancton des Gregory see auf Ceylon. Zool. Jb. (Syst.) 29 : 661-680. BAIRD, W. (1849)-Thenaturalhistory oftheBritishEntomostraca. Ray Soc. Lond. 364pp. BAR, G.(1924)-UberCiadoceren von derlnsel Ceylon (Fauna etAnatomia Ceylonica No.14) Jena. Z.Naturw. 60: 83-125. BEHNING, A. L. (1941)-(Kladotsera Kavkasa) Cladocera of the Caucasus (In Rusian) Tbilisi, Gzushedgiz. 383 pp. BIRABEN, M. (1939)-Los Cladoceros d'Lafamilie "Chydoridae". Physis. (Rev. Soc. Argentina Cien. Natur.) 17, 651-671 BRADY, G. S. (1886)-Notes on Entomostraca collected by Mr. A. Haly in Ceylon. Linn. Soc. Jour. Lond. (Zool.) 10: 293-317. BRANDLOVA, J., BRANDL. Z., and FERNANDO, C. H. (1972)-The Cladoceraof Ontariowithremarksonsomespecie distribution. Can. J. Zool. 50 : 1373-1403. BREHM, V. (1909)-Uber die microfauna chinesicher and sudasiatischer susswassbickers. Arch. Hydrobiol. 4, 207-224. -
A Genus-Level Supertree of Adephaga (Coleoptera) Rolf G
ARTICLE IN PRESS Organisms, Diversity & Evolution 7 (2008) 255–269 www.elsevier.de/ode A genus-level supertree of Adephaga (Coleoptera) Rolf G. Beutela,Ã, Ignacio Riberab, Olaf R.P. Bininda-Emondsa aInstitut fu¨r Spezielle Zoologie und Evolutionsbiologie, FSU Jena, Germany bMuseo Nacional de Ciencias Naturales, Madrid, Spain Received 14 October 2005; accepted 17 May 2006 Abstract A supertree for Adephaga was reconstructed based on 43 independent source trees – including cladograms based on Hennigian and numerical cladistic analyses of morphological and molecular data – and on a backbone taxonomy. To overcome problems associated with both the size of the group and the comparative paucity of available information, our analysis was made at the genus level (requiring synonymizing taxa at different levels across the trees) and used Safe Taxonomic Reduction to remove especially poorly known species. The final supertree contained 401 genera, making it the most comprehensive phylogenetic estimate yet published for the group. Interrelationships among the families are well resolved. Gyrinidae constitute the basal sister group, Haliplidae appear as the sister taxon of Geadephaga+ Dytiscoidea, Noteridae are the sister group of the remaining Dytiscoidea, Amphizoidae and Aspidytidae are sister groups, and Hygrobiidae forms a clade with Dytiscidae. Resolution within the species-rich Dytiscidae is generally high, but some relations remain unclear. Trachypachidae are the sister group of Carabidae (including Rhysodidae), in contrast to a proposed sister-group relationship between Trachypachidae and Dytiscoidea. Carabidae are only monophyletic with the inclusion of a non-monophyletic Rhysodidae, but resolution within this megadiverse group is generally low. Non-monophyly of Rhysodidae is extremely unlikely from a morphological point of view, and this group remains the greatest enigma in adephagan systematics. -
Aquatic Ecosystems and Invertebrates of the Grand Staircase-Escalante National Monument Cooperative Agreement Number JSA990024 Annual Report of Activities for 2000
Aquatic Ecosystems and Invertebrates of the Grand Staircase-Escalante National Monument Cooperative Agreement Number JSA990024 Annual Report of Activities for 2000 Mark Vinson National Aquatic Monitoring Center Department of Fisheries and Wildlife Utah State University Logan, Utah 84322-5210 www.usu.edu/buglab 1 April 2001 i Table of contents Page Foreword ........................................................................... i Introduction ........................................................................ 1 Study area ......................................................................... 1 Long-term repeat sampling sites ........................................................ 2 Methods Locations and physical habitat ................................................... 3 Aquatic invertebrates Qualitative samples...................................................... 3 Quantitative samples ..................................................... 4 Laboratory methods ........................................................... 4 Results Sampling locations............................................................ 5 Habitat types................................................................. 6 Water temperatures ........................................................... 8 Aquatic invertebrates .......................................................... 8 Literature cited..................................................................... 13 Appendices 1. Aquatic invertebrates collected in the major habitats A. Alcove pools ...................................................... -
Amphizoidae: Description of Amphizoa Smetanai Sp.N. and Supplementary Description of A
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Water Beetles of China Jahr/Year: 1998 Band/Volume: 2 Autor(en)/Author(s): Roughley Robert E., Xie Weiping, Yu Peiyu Artikel/Article: Amphizoidae: Description of Amphizoa smetanai sp.n. and supplementary description of A. davidi Lucas (Coleoptera) 123-129 © Wiener Coleopterologenverein, Zool.-Bot. Ges. Österreich, Austria; download unter www.biologiezentrum.at M.A.JACII&L. Ji(cds.): Water Beetles of China Vol.11 123-129 Wien, December 1998 AMPHIZOIDAE: Description of Amphizoa smetanai sp.n. and supplementary description of A. davidi LUCAS (Coleoptera) R.E. ROUGULEY, W. XIE & P. Yu Abstract A new species, Amphizoa smetanai (Coleoptera: Amphizoidae), is described from Emci Shan, Sichuan Province, China. The adult female of Amphizoa davidi LUCAS is described for the first time in this paper. A revised key to the adults of all six known species (three North American and three Chinese) of Amphizoa is provided. Key words: Coleoptera, Amphizoidae, Amphizoa davidi, Amphizoa smetanai, new species, China. Introduction The family Amphizoidae includes only one genus, Amphizoa LECONTE, 1853, and presently it consists of six known species. There are three species in western North America: A. insolens LECONTE, 1853, A. striata VAN DYKE, 1927, and A. lecontei MATTHEWS, 1872, and three in China: A. davidi LUCAS, 1882, A. sinica Yu & STORK, 1991, and A. smetanai sp.n. In North America, amphizoids are restricted to the western states and provinces from Alaska south to southern California and east to central Wyoming and Colorado. The Chinese species occur in Jilin and Sichuan. -
Measuring Genome Sizes Using Read-Depth, K-Mers, and Flow Cytometry: Methodological Comparisons in Beetles (Coleoptera)
G3: Genes|Genomes|Genetics Early Online, published on June 29, 2020 as doi:10.1534/g3.120.401028 1 Measuring genome sizes using read-depth, k-mers, and flow 2 cytometry: methodological comparisons in beetles (Coleoptera) 3 James M. Pflug,*, Valerie Renee Holmes,† Crystal Burrus,† J. Spencer Johnston,† and David R. 4 Maddison* 5 6 *Department of Integrative Biology, Oregon State University, Corvallis, OR 97331, USA 7 †Department of Entomology, Texas A&M University, College Station, TX 77843, USA 8 1 Corresponding author: 3029 Cordley Hall, Department of Integrative Biology, Oregon State University, Corvallis, OR 97331 USA. E-mail: [email protected] © The Author(s) 2020. Published by the Genetics Society of America. 2 9 Abstract 10 Measuring genome size across different species can yield important insights into 11 evolution of the genome and allow for more informed decisions when designing next-generation 12 genomic sequencing projects. New techniques for estimating genome size using shallow 13 genomic sequence data have emerged which have the potential to augment our knowledge of 14 genome sizes, yet these methods have only been used in a limited number of empirical studies. In 15 this project, we compare estimation methods using next-generation sequencing (k-mer methods 16 and average read depth of single-copy genes) to measurements from flow cytometry, a standard 17 method for genome size measures, using ground beetles (Carabidae) and other members of the 18 beetle suborder Adephaga as our test system. We also present a new protocol for using read- 19 depth of single-copy genes to estimate genome size. -
STUTTGARTER BEITRÄGE ZUR NATURKUNDE Ser
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Stuttgarter Beiträge Naturkunde Serie A [Biologie] Jahr/Year: 1991 Band/Volume: 469_A Autor(en)/Author(s): Beutel Rolf Georg Artikel/Article: Internal and External Structures of the Head of 3rd instar Larvae oi Amphizoa lecontei Matthews (Coleoptera: Amphizoidae). A Contribution towards the Clarification of the Systematic Position of Amphizoidae 1-24 download Biodiversity Heritage Library, http://www.biodiversitylibrary.org/ "^Stuttgarter Beiträge zur' Naturkunde Serie A (Biologie) Herauseeber: Staatliches Museum für Naturkunde, Rosenstein 1, Stuttgarter Beitr. Naturk. Ser. A Nr. 469 24 S. Stuttgart, 15. 10. 1991 Internal and External Structures of the Head of 3^^ instar Larvae oi Amphizoa lecontei Matthews (Coleoptera: Amphizoidae). A Contribution towards the Clarification of the Systematic Position of Amphizoidae By Rolf G. Beutel, Aachen With 8 fieures Summary 1.) Internal and external structures of the head of 3'''' instar larvae of Amphizoa lecontei Matthews 1872 were examined and interpreted phylogenetically. 2.) The presence of strongly developed, complex ventral pharyngeal dilator muscles is con- sidered as a possible synapomorphy of Trachypachini and Hydradephaga excl. Gyrinidae. 3.) Caudal tentorial arms, the complete loss of the lacinia, and the origin of the galea from the unsclerotized mesal side of palpomere I are considered as synapomorphies of a monophy- letic unit comprising Trachypachini, Noteridae, Amphizoidae, Hygrobiidae, and Dytiscidae. 4.) Separation of the posterior tentorial grooves as found in larvae of Haliplidae, Noteridae, Amphizoidae, Hygrobiidae, and Dytiscidae is a feature vi^hich has probably evolved several times independently. 5.) The articulation of the maxilla with an elongated, flexible process of the anterior margin of the head capsule is a possible synapomorphy of Noteridae, Amphizoidae, Hygrobiidae, and Dytiscidae. -
Does Mating Negatively Affect Female Immune Defences in Insects?
Animal Biology 69 (2019) 117–136 brill.com/ab Does mating negatively affect female immune defences in insects? Keiko Oku1,∗, Tom A.R. Price2 and Nina Wedell1 1 Centre for Ecology and Conservation, University of Exeter, Cornwall Campus, Penryn TR10 9FE, UK 2 Institute of Integrative Biology, University of Liverpool, Biosciences Building, Crown Street, Liverpool L69 7ZB, UK Submitted: July 26, 2018. Final revision received: January 25, 2019. Accepted: February 4, 2019 Abstract Immunity is an important mechanism of protection against pathogens and parasites. One factor that can influence immunity is mating. During mating, male-derived materials are transferred to females, and the physical contact also involves the potential risk of sexually transmitted infections, and wound- ing. Thus, mating can challenge a female’s immune system. This review focuses on exploring how immunity and mating interact in female insects. Although mating has been shown to cause female immune responses in several species, the responses do not always match the observed resistance to pathogens/parasites. Mating up-regulates female immune responses while female resistance is reduced compared to virgin females in some species, and vice versa in other taxa. We discuss why mismatches occur and why post-mating female resistance differs among species, and suggest that measured im- mune responses may not correlate with female resistance. Also, the mating system will play a major role. Polyandrous mating systems can generate intense post-mating sexual conflict, which can im- pose high costs of mating on females. Reduced female post-mating resistance may be due to direct suppression of female immunity by males. -
Insect Egg Size and Shape Evolve with Ecology but Not Developmental Rate Samuel H
ARTICLE https://doi.org/10.1038/s41586-019-1302-4 Insect egg size and shape evolve with ecology but not developmental rate Samuel H. Church1,4*, Seth Donoughe1,3,4, Bruno A. S. de Medeiros1 & Cassandra G. Extavour1,2* Over the course of evolution, organism size has diversified markedly. Changes in size are thought to have occurred because of developmental, morphological and/or ecological pressures. To perform phylogenetic tests of the potential effects of these pressures, here we generated a dataset of more than ten thousand descriptions of insect eggs, and combined these with genetic and life-history datasets. We show that, across eight orders of magnitude of variation in egg volume, the relationship between size and shape itself evolves, such that previously predicted global patterns of scaling do not adequately explain the diversity in egg shapes. We show that egg size is not correlated with developmental rate and that, for many insects, egg size is not correlated with adult body size. Instead, we find that the evolution of parasitoidism and aquatic oviposition help to explain the diversification in the size and shape of insect eggs. Our study suggests that where eggs are laid, rather than universal allometric constants, underlies the evolution of insect egg size and shape. Size is a fundamental factor in many biological processes. The size of an 526 families and every currently described extant hexapod order24 organism may affect interactions both with other organisms and with (Fig. 1a and Supplementary Fig. 1). We combined this dataset with the environment1,2, it scales with features of morphology and physi- backbone hexapod phylogenies25,26 that we enriched to include taxa ology3, and larger animals often have higher fitness4. -
Sovraccoperta Fauna Inglese Giusta, Page 1 @ Normalize
Comitato Scientifico per la Fauna d’Italia CHECKLIST AND DISTRIBUTION OF THE ITALIAN FAUNA FAUNA THE ITALIAN AND DISTRIBUTION OF CHECKLIST 10,000 terrestrial and inland water species and inland water 10,000 terrestrial CHECKLIST AND DISTRIBUTION OF THE ITALIAN FAUNA 10,000 terrestrial and inland water species ISBNISBN 88-89230-09-688-89230- 09- 6 Ministero dell’Ambiente 9 778888988889 230091230091 e della Tutela del Territorio e del Mare CH © Copyright 2006 - Comune di Verona ISSN 0392-0097 ISBN 88-89230-09-6 All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, without the prior permission in writing of the publishers and of the Authors. Direttore Responsabile Alessandra Aspes CHECKLIST AND DISTRIBUTION OF THE ITALIAN FAUNA 10,000 terrestrial and inland water species Memorie del Museo Civico di Storia Naturale di Verona - 2. Serie Sezione Scienze della Vita 17 - 2006 PROMOTING AGENCIES Italian Ministry for Environment and Territory and Sea, Nature Protection Directorate Civic Museum of Natural History of Verona Scientifi c Committee for the Fauna of Italy Calabria University, Department of Ecology EDITORIAL BOARD Aldo Cosentino Alessandro La Posta Augusto Vigna Taglianti Alessandra Aspes Leonardo Latella SCIENTIFIC BOARD Marco Bologna Pietro Brandmayr Eugenio Dupré Alessandro La Posta Leonardo Latella Alessandro Minelli Sandro Ruffo Fabio Stoch Augusto Vigna Taglianti Marzio Zapparoli EDITORS Sandro Ruffo Fabio Stoch DESIGN Riccardo Ricci LAYOUT Riccardo Ricci Zeno Guarienti EDITORIAL ASSISTANT Elisa Giacometti TRANSLATORS Maria Cristina Bruno (1-72, 239-307) Daniel Whitmore (73-238) VOLUME CITATION: Ruffo S., Stoch F. -
Studies on Neotropical Fauna and Environment Study on The
This article was downloaded by: [Russian Academy of Sciences] On: 07 March 2014, At: 00:24 Publisher: Taylor & Francis Informa Ltd Registered in England and Wales Registered Number: 1072954 Registered office: Mortimer House, 37-41 Mortimer Street, London W1T 3JH, UK Studies on Neotropical Fauna and Environment Publication details, including instructions for authors and subscription information: http://www.tandfonline.com/loi/nnfe20 Study on the systematic position of Systolosoma breve Solier (Adephaga: Trachypachidae) Based on characters of the thorax Rolf G. Beutel a a Institut für Spezielle Zoologie und Evolutionsbiologie , FSU Jena , Erbertstraße 1, 07743, Jena, Germany Published online: 19 Nov 2008. To cite this article: Rolf G. Beutel (1994) Study on the systematic position of Systolosoma breve Solier (Adephaga: Trachypachidae) Based on characters of the thorax, Studies on Neotropical Fauna and Environment, 29:3, 161-167, DOI: 10.1080/01650529409360928 To link to this article: http://dx.doi.org/10.1080/01650529409360928 PLEASE SCROLL DOWN FOR ARTICLE Taylor & Francis makes every effort to ensure the accuracy of all the information (the “Content”) contained in the publications on our platform. However, Taylor & Francis, our agents, and our licensors make no representations or warranties whatsoever as to the accuracy, completeness, or suitability for any purpose of the Content. Any opinions and views expressed in this publication are the opinions and views of the authors, and are not the views of or endorsed by Taylor & Francis. The accuracy of the Content should not be relied upon and should be independently verified with primary sources of information. Taylor and Francis shall not be liable for any losses, actions, claims, proceedings, demands, costs, expenses, damages, and other liabilities whatsoever or howsoever caused arising directly or indirectly in connection with, in relation to or arising out of the use of the Content. -
Carabidae Semiochemistry: Current and Future Directions
Journal of Chemical Ecology https://doi.org/10.1007/s10886-018-1011-8 REVIEW ARTICLE Carabidae Semiochemistry: Current and Future Directions Adam M. Rork1 & Tanya Renner1 Received: 30 May 2018 /Revised: 14 August 2018 /Accepted: 23 August 2018 # Springer Science+Business Media, LLC, part of Springer Nature 2018 Abstract Ground beetles (Carabidae) are recognized for their diverse, chemically-mediated defensive behaviors. Produced using a pair of pygidial glands, over 250 chemical constituents have been characterized across the family thus far, many of which are considered allomones. Over the past century, our knowledge of Carabidae exocrine chemistry has increased substantially, yet the role of these defensive compounds in mediating behavior other than repelling predators is largely unknown. It is also unclear whether non-defensive compounds produced by ground beetles mediate conspecific and heterospecific interactions, such as sex- aggregation pheromones or kairomones, respectively. Here we review the current state of non-exocrine Carabidae semiochemistry and behavioral research, discuss the importance of semiochemical research including but not limited to allomones, and describe next-generation methods for elucidating the underlying genetics and evolution of chemically- mediated behavior. Keywords Carabidae . Chemical ecology . Allomones . Entomology . Semiochemistry . Transcriptomics . Phylogenetics Introduction and behavioral research in Carabidae and discuss new methods for studying the underlying genetics and evolution Ground beetles (Carabidae) have long captured the attention of biosynthetic pathways responsible for synthesis of these of evolutionary biologists and chemical ecologists due to their semiochemicals. great diversity and array of chemical defensive strategies (Darwin 1846;Eisner1958). Since Thomas Eisner’s pioneering studies on bombardier beetles, knowledge of cara- Carabidae Semiochemistry bid defensive chemistry has grown tremendously, with over 250 distinct chemical classes currently described (Lečić et al.