SCHUSTER, PETER, University of Vienna Full Professor Of
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Contrasting Theories of Life: Historical Context, Current Theories
BioSystems 188 (2020) 104063 Contents lists available at ScienceDirect BioSystems journal homepage: www.elsevier.com/locate/biosystems Review article Contrasting theories of life: Historical context, current theories. In search of an ideal theory Athel Cornish-Bowden <, María Luz Cárdenas Aix Marseille Univ, CNRS, BIP, IMM, Marseille, France ARTICLEINFO ABSTRACT Keywords: Most attempts to define life have concentrated on individual theories, mentioning others hardly at all, but here Autocatalytic sets we compare all of the major current theories. We begin by asking how we know that an entity is alive, and Autopoiesis continue by describing the contributions of La Mettrie, Burke, Leduc, Herrera, Bahadur, D'Arcy Thompson and, Chemoton especially, Schrödinger, whose book What is Life? is a vital starting point. We then briefly describe and discuss Closure (M, R) systems, the hypercycle, the chemoton, autopoiesis and autocatalytic sets. All of these incorporate the Hypercycle Metabolic circularity idea of circularity to some extent, but all of them fail to take account of mechanisms of metabolic regulation, (M, R) systems which we regard as crucial if an organism is to avoid collapsing into a mass of unregulated reactions. In Origin of life a final section we study the extent to which each of the current theories can aid in the search for a more Self-organization complete theory of life, and explain the characteristics of metabolic control analysis that make it essential for an adequate understanding of organisms. Contents 1. General introduction -
MARTIN A. NOWAK Curriculum Vitae
MARTIN A. NOWAK Curriculum Vitae Personal Information Name: Martin Andreas Nowak Address: Program for Evolutionary Dynamics, Harvard University One Brattle Square, Cambridge, MA 02138 Phone: (617) 496-4737 Fax: (617) 496-4629 Email: [email protected] Web: www.ped.fas.harvard.edu Degrees: M.Sc. Vienna, Ph.D. Vienna, M.A. (honoris causa) Oxford, A.M. (honoris causa) Harvard, Ph.D. (honoris causa) Cuza University of Iasi, Ph.D. (honoris causa) Dominican School of Philosophy and Theology Current position Professor of Mathematics and Biology, Harvard University Director, Program for Evolutionary Dynamics, Harvard University Education 1975-1983 Albertus Magnus Gymnasium in Vienna 1983-1989 University of Vienna, studying Biochemistry and Mathematics 1985 First Diploma: Biochemistry (first class honors) 1987 Diploma thesis: Theoretical Chemistry 1987 Second Diploma: Biochemistry (first class honors; finished one year faster) 1987-1989 Doctoral thesis: Mathematics 1989 Final exams for degree Doctor rerum naturalium (with highest honors) Scientific career Vienna: 1987-1988 Institute for Theoretical Chemistry, Peter Schuster 1987-1989 Institute for Mathematics, Karl Sigmund 1988 Max Planck Institute for Biophysical Chemistry, Göttingen, Manfred Eigen 1993 "Habilitation" at the Institute of Mathematics, University of Vienna Oxford: 1989-1990 Erwin Schrödinger Scholarship to work with Robert May (Lord May of Oxford) 1990-1992 Guy Newton Junior Research Fellow, Wolfson College 1991 Royal Society Research Grant Page 1 of 30 1992-1998 Wellcome -
LAUDATIO on the Occasion of the Investiture of Professor Martin
LAUDATIO on the occasion of the investiture of Professor Martin Andreas NOWAK , of Harvard University, USA, with the degree of Doctor Honoris Causa of Alexandru Ioan Cuza University of Iaşi 9th June 2010 www.uaic.ro Laudatio In honor of Professor Martin Andreas NOWAK , Harvard University, USA “Science is organised knowledge. Wisdom is organised life.” The words of Immanuel Kant quoted above provide us with the appropriate background against which we can speak of a scholar who, by means of science, produces wisdom. Our attempt today - at mentioning the merits which entitle us to confer Professor Nowak the highest distinction an academic institution can offer – is a delicate one, since, unfair as it may be, we can only select from the multitude of his discoveries and accomplishments. Born in 1965 in Vienna, Martin Nowak begins his studies in the fields of Biochemistry and Mathematics at the University of Vienna. He graduates in 1987, a year earlier than normally scheduled and with the highest marks, having had the privilege to work under the supervision of Peter Schuster – the current president of the Austrian Academy of Sciences. Together, they continued the quasispecies theory (a theory on which Professor Schuster had worked with the German Professor Manfred Eigen, the Nobel Prize laureate for Chemistry in 1967). Martin Nowak himself cooperated with Professor 1 Eigen in 1988 at the Max Planck Institute for Biophysical Chemistry, Göttingen. Two years later, at the age of 24, Martin Nowak is awarded the title of ” Doctor rerum naturalium sub auspiciis praesidentis ” – by the same university - with a thesis in Mathematics about the evolution of cooperation. -
RNA Viruses: Esteban Domingo, Colin R
Bioinformatics and the molecular connection to biology Peter Schuster Institut für Theoretische Chemie, Universität Wien, Austria and The Santa Fe Institute, Santa Fe, New Mexico, USA 10 Years of Bioinformatics in Leipzig Leipzig, 20.09.2012 Web-Page for further information: http://www.tbi.univie.ac.at/~pks Prologue There will never be a Newton of the blade of grass, because human science will never be able to explain how a living being can originate from inanimate matter. Immanuel Kant, 1790 Three interpretations of Kant‘s „Newton of the blade of grass“: (i) Life science will never be explainable by methods based on physics and chemistry. (ii) Origin of life questions are outside science. (iii) Application of mathematics to biology leads nowhere. I maintainDarwin‘s onlyselection that and in Mendelian every specialgenetics beingdoctrine at serious of natureodds in the only biology so much of the earlyscience twentieth can centurybe found have asbeen there first united is mathematics in the mathematical in it. model of population genetics. Three historical examples of using mathematics in biology 1. The case that did not happen – Charles Darwin 2. Blind insight or correct guess – Gregor Mendel 3. Nature has chosen a less elegant way – Alan Turing Voyage on HMS Beagle, 1831 - 1836 Charles Darwin, 1809 - 1882 Phenotypes Fibonacci series geometric progression exponential function Leonardo da Pisa „Fibonacci“ Thomas Robert Malthus, Leonhard Euler, ~1180 – ~1240 1766 – 1834 1717 – 1783 autocatalysis dx = f x (1− x) ⇒ x(t) = x (0) exp( f t) dt competition dx k = f x ; k =1,2,,n dt k k xk (t) = xk (0) exp( fk t) The chemistry and the mathematics of reproduction Pierre-François Verhulst, 1804-1849 d x x = f x1− dt γ x γ x(t) = 0 x0 + (γ +x0 )exp(− ft) the consequence of finite resources fitness values: The logistic equation, 1828 f1 = 2.80, f2 = 2.35, f3 = 2.25, and f4 = 1.75 Three necessary conditions for Darwinian evolution are: 1. -
5.2 Turning Points
essay turning points Prisoners of the dilemma When mathematics and biology met on a mountain. Martin A. Nowak nce a year, the theoretical chemist Peter Schuster used to take his stu- Odents from the University of Vienna to a small house in the Austrian mountains. During the day we skied, of course, but in the evening the emphasis was on science. I was a first-year PhD student looking for a project. The mathematician Karl Sigmund was there and gave a talk on what was a new topic for him: the prisoner’s dilemma. At the end of the talk I asked a question, and the next day we travelled back to Vienna, endlessly debat- ing this game. In subsequent days, I visited Karl’s office and we started to do calculations. We had become prisoners of the dilemma. I was amazed that mathematics could be used to explore the evolution of social inter- actions. In the prisoner’s dilemma, two play- An Austrian holiday led to iterated cooperation between Karl Sigmund (left) and Martin Nowak. ers have a choice between cooperation and defection. If both cooperate, they get more pleased my parents. But in the last vacation Within a year,we had conceived an evolu- than if both defect. But if one cooperates before university, I realized that my passion tionary description of probabilistic strate- while the other defects, the cooperator gets was to understand the natural laws of living gies in the prisoner’s dilemma struggling the lowest score and the defector the highest. systems, and I switched from medicine to bio- for cooperation by natural selection (see This is the dilemma.