Oecd Guidelines for the Testing of Chemicals
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The 2014 Golden Gate National Parks Bioblitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event
National Park Service U.S. Department of the Interior Natural Resource Stewardship and Science The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 ON THIS PAGE Photograph of BioBlitz participants conducting data entry into iNaturalist. Photograph courtesy of the National Park Service. ON THE COVER Photograph of BioBlitz participants collecting aquatic species data in the Presidio of San Francisco. Photograph courtesy of National Park Service. The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 Elizabeth Edson1, Michelle O’Herron1, Alison Forrestel2, Daniel George3 1Golden Gate Parks Conservancy Building 201 Fort Mason San Francisco, CA 94129 2National Park Service. Golden Gate National Recreation Area Fort Cronkhite, Bldg. 1061 Sausalito, CA 94965 3National Park Service. San Francisco Bay Area Network Inventory & Monitoring Program Manager Fort Cronkhite, Bldg. 1063 Sausalito, CA 94965 March 2016 U.S. Department of the Interior National Park Service Natural Resource Stewardship and Science Fort Collins, Colorado The National Park Service, Natural Resource Stewardship and Science office in Fort Collins, Colorado, publishes a range of reports that address natural resource topics. These reports are of interest and applicability to a broad audience in the National Park Service and others in natural resource management, including scientists, conservation and environmental constituencies, and the public. The Natural Resource Report Series is used to disseminate comprehensive information and analysis about natural resources and related topics concerning lands managed by the National Park Service. -
Salmon Mortalities at Inver Bay and Mcswyne’S Bay Finfish Farms, County Donegal, Ireland, During 2003 ______
6$/0210257$/,7,(6$7,19(5%$<$1'0&6:<1(¶6%$< ),1),6+)$506&2817<'21(*$/,5(/$1''85,1* )HEUXDU\ 0V0DUJRW&URQLQ 'U&DUROLQH&XVDFN 0V)LRQD*HRJKHJDQ 'U'DYH-DFNVRQ 'U(YLQ0F*RYHUQ 'U7HUU\0F0DKRQ 'U)UDQFLV2¶%HLUQ 0U0LFKHiOÏ&LQQHLGH 0U-RH6LONH &KHPLVWU\6HFWLRQ0DULQH,QVWLWXWH*DOZD\ (G 3K\WRSODQNWRQ8QLW0DULQH,QVWLWXWH*DOZD\ )LVK+HDOWK8QLW0DULQH,QVWLWXWH'XEOLQ $TXDFXOWXUH8QLW0DULQH,QVWLWXWH*DOZD\ &KHPLVWU\6HFWLRQ0DULQH,QVWLWXWH*DOZD\ %LRWR[LQ8QLW0DULQH,QVWLWXWH'XEOLQ %HQWKLF0RQLWRULQJ8QLW0DULQH,QVWLWXWH*DOZD\ 0DULQH(QYLURQPHQW )RRG6DIHW\6HUYLFHV0DULQH,QVWLWXWH*DOZD\ %LRWR[LQ8QLW0DULQH,QVWLWXWH*DOZD\ ,66112 Salmon Mortalities at Inver Bay and McSwyne’s Bay Finfish farms, County Donegal, Ireland, during 2003 ________________________________________________________________________ 2 Marine, Environment and Health Series, No.15, 2004 ___________________________________________________________________________________ Page no. CHAPTER 1 INTRODUCTION 6 1.1 Summary 6 1.2 Background 6 1.3 Summary mortalities by farm 8 1.4 Pattern of mortality development 9 1.5 Phases of MI investigation 10 1.6 Alternative scenarios 11 CHAPTER 2 ENVIRONMENTAL CONDITIONS 12 2.1 Summary 12 2.2 Currents 12 2.3 Water column structure 17 2.4 Wind data 19 2.5 Temperatures recorded in Inver and McSwynes Bay during 2003 21 2.6 References 24 CHAPTER 3 FISH HEALTH AND FARM MANAGEMENT, 2003 25 3.1 Data sources and approach 25 3.2 Site visits and Veterinary investigations 25 3.3 Farm management 36 3.4 Feed 36 3.5 Cage analysis 37 3.6 Sea lice (counts and treatments) 37 3.7 Discussion -
Using Toxicity Tests in Ecological Risk Assessment Toxicity Tests Are Used to Expose Test Organisms to a 2
United States Office of Publication 9345.0-05I Environmental Solid Waste and March 1994 Protection Emergency Response Agency ECO Update Office of Emergency Remedial Response Intermittent Bulletin Hazardous Site Evaluation Division (5204G) Volume 2 Number1 Using Toxicity Tests in Ecological Risk Assessment Toxicity tests are used to expose test organisms to a 2. Toxicity tests can evaluate the aggregate toxic effects of medium—water, sediment, or soil—and evaluate the effects of all contaminants in a medium. Many Superfund sites present contamination on the survival, growth, reproduction, behavior a complex array of contaminants, with a mixture of potentially and/or other attributes of these organisms. These tests may harmful substances present in the media. At such sites, help to determine whether the contaminant concentrations in a chemical data alone cannot accurately predict the toxicity of site’s media are high enough to cause adverse effects in the contaminants. Rather, toxicity tests measure the aggregate organisms. Generally, toxicity tests involve collecting effects of contaminated media on organisms. These effects samples of media from a site and sending them to a toxicity result from characteristics of the medium itself (such as laboratory, where the tests are performed. On occasion hardness and pH, in the case of water), interactions among investigators1 measure toxicity by exposing test organisms to contaminants, and interactions between contaminants and soil or water on site—these are known as in situ tests. media. Consequently, observed toxicity test results may often vary from those predicted by chemical data alone. As the general guidelines at the end of this Bulletin indicate, not all sites require toxicity tests. -
Gene-Signature-Derived Ic50s/Ec50s Reflect the Potency of Causative
www.nature.com/scientificreports OPEN Gene-signature-derived IC50s/EC50s refect the potency of causative upstream targets and downstream phenotypes Stefen Renner1 ✉ , Christian Bergsdorf1, Rochdi Bouhelal1, Magdalena Koziczak-Holbro2, Andrea Marco Amati1,6, Valerie Techer-Etienne1, Ludivine Flotte2, Nicole Reymann1, Karen Kapur3, Sebastian Hoersch3, Edward James Oakeley4, Ansgar Schufenhauer1, Hanspeter Gubler3, Eugen Lounkine5,7 & Pierre Farmer1 ✉ Multiplexed gene-signature-based phenotypic assays are increasingly used for the identifcation and profling of small molecule-tool compounds and drugs. Here we introduce a method (provided as R-package) for the quantifcation of the dose-response potency of a gene-signature as EC50 and IC50 values. Two signaling pathways were used as models to validate our methods: beta-adrenergic agonistic activity on cAMP generation (dedicated dataset generated for this study) and EGFR inhibitory efect on cancer cell viability. In both cases, potencies derived from multi-gene expression data were highly correlated with orthogonal potencies derived from cAMP and cell growth readouts, and superior to potencies derived from single individual genes. Based on our results we propose gene-signature potencies as a novel valid alternative for the quantitative prioritization, optimization and development of novel drugs. Gene expression signatures are widely used in the feld of translational medicine to defne disease sub-types1, severity2 and predict treatment outcome3. Bridging this technology to early drug discovery was previously pro- posed years ago4,5 but its prohibitive costs limited this approach. Te recent advancement of massively parallel gene expression technologies such as RASL-seq.6, DRUG-seq.7, QIAseq.8,9, PLATE-seq.10, or LINCS L100011 are now transforming the feld of compound profling, enabling larger scale profling and screening experiments at a more afordable cost12–17. -
First Record of Navicula Pelagica (Bacillariophyta) in the South Atlantic Ocean: the Intriguing Occurrence of a Sea-Ice-Dwelling Species in a Tropical Estuary
First record of Navicula pelagica (Bacillariophyta) in the South Atlantic Ocean: the intriguing occurrence of a sea-ice-dwelling species in a tropical estuary HELEN MICHELLE DE JESUS AFFE1*, DIOGO SOUZA BEZERRA ROCHA2, MARIÂNGELA MENEZES3 & JOSÉ MARCOS DE CASTRO NUNES1 1 Laboratório de Algas Marinhas, Instituto de Biologia, Universidade Federal da Bahia. Rua Barão de Jeremoabo s/n, Ondina, Salvador, Bahia, 40170-115. Brazil 2 Instituto de Pesquisa Jardim Botânico do Rio de Janeiro. Rua Pacheco Leão, nº 915, Rio de Janeiro, Rio de Janeiro, 22460-030. Brazil 3 Laboratório de Ficologia, Departamento de Botânica, Museu Nacional, Universidade Federal do Rio de Janeiro. Quinta da Boa Vista s/n, São Cristovão, Rio de Janeiro, Rio de Janeiro, 20940040. Brazil * Corresponding author: [email protected] Abstract. Despite the wide distribution of species of the genus Navicula in the most diverse habitats around the globe, Navicula pelagica Cleve (Bacillariophyceae) is reported almost exclusively as one of the main components of the diatom biota of Arctic sea-ice. The present study is the first record of N. pelagica in the South Atlantic Ocean (Brazil) and demonstrates an ecological niche model of the species. The analyzed specimens were rectangular, with rounded angles in pleural view, the pervalvar axis measured 7.9-9.5μm and the apical axis 22-25μm, an evident central nucleus and two comma-shaped chloroplasts, one on each side of the nucleus, were observed. The specimens formed chains of 35 cells, on average, arranged in the typical pattern of rotation about the chain axis relative to their neighboring cell. The applied ecological niche model indicated that the Brazilian coast has low environmental suitability (~12%) for the development of N. -
Clinical Pharmacokinetics 38
Clin Pharmacokinet 2000 Jun; 38 (6): 505-518 ORIGINAL RESEARCH ARTICLE 0312-5963/00/0006-0505/$20.00/0 © Adis International Limited. All rights reserved. Pharmacokinetic-Pharmacodynamic Modelling of the Antipyretic Effect of Two Oral Formulations of Ibuprofen Iñaki F. Trocóniz,1 Santos Armenteros,2 María V. Planelles,3 Julio Benítez,4 Rosario Calvo5 and Rosa Domínguez2 1 Department of Pharmacy and Pharmaceutical Technology, Faculty of Pharmacy, University of Navarra, Pamplona, Spain 2 Medical Department, Laboratorios Knoll S.A., Madrid, Spain 3 Department of Paediatrics, Clinic Hospital, Valencia, Spain 4 Department of Pharmacology, Faculty of Medicine, University of Extremadura, Badajoz, Spain 5 Department of Pharmacology, Faculty of Medicine, University of the Basque Country, Lejona, Spain Abstract Objective: To analyse the population pharmacokinetic-pharmacodynamic relation- ships of racemic ibuprofen administered in suspension or as effervescent granules with the aim of exploring the effect of formulation on the relevant pharmaco- dynamic parameters. Design: The pharmacokinetic model was developed from a randomised, cross- over bioequivalence study of the 2 formulations in healthy adults. The pharmaco- dynamic model was developed from a randomised, multicentre, single dose efficacy and safety study of the 2 formulations in febrile children. Patients and participants: Pharmacokinetics were studied in 18 healthy volun- teers aged 18 to 45 years, and pharmacodynamics were studied in 103 febrile children aged between 4 and 16 years with bodyweight ≥25kg. Methods: The pharmacokinetic study consisted of two 1-day study occasions, each separated by a 1-week washout period. On each occasion ibuprofen 400mg was administered orally as suspension or granules. The time course of the anti- pyretic effect was evaluated in febrile children receiving a single oral dose of 7 mg/kg in suspension or 200 or 400mg as effervescent granules. -
Center for Environmental Research and Coastal Oceans Monitoring (CERCOM)
Center for Environmental Research and Coastal Oceans Monitoring (CERCOM) Molloy College Great South Bay, Long Island, New York Summer Phytoplankton Identification & Monitoring Program Annual Inventory Report 2019 FINAL REPORT Director; Dr. John T. Tanacredi Scientific Research Technical Assistant; Mr. Kyle F. Maurelli Administrative Coordinator; Ms. Regina Gorney Address: 132 Clyde Street West Sayville, NY 11796 2019 Student Intern Participation: Drew O’Connor Earth & Environmental Molloy College Studies Thomas Nadraus Biology Molloy College Brian Ford Biology Molloy College Ryan Mehryari Biology Molloy College Daman Kaur Nursing Molloy College Nick Buscemi Earth & Environmental Boston University Studies/ Philosophy Desmond Smith Earth & Environmental Molloy College Studies Erin Tudryn Earth & Environmental Molloy College Studies/ ART Caroline Kane Earth & Environmental Molloy College Studies Mark Maurelli Biomedical Engineering Stevens Institute for Technology Phytoplankton Collection Methodologies: 80 micron Plankton Tow Net with sample bottle attachment Phytoplankton Protocol: 1. Gather Samples 2. Make one slide per sample 3. View slides using microscope connected with computer 4. Record findings using “ Row # “ and “ Colum letter “ 5. Record using “ Tally’s “ per species found within sample 6. Capture anything interesting “ Take Picture “ 7. Duplicate pictures taken 8. Make sure measurement of species found is taken 9. Email Jennifer Maucher at [email protected] , include pictures, questions and names of the species you “guess” you found. If requested by NOAA, Jennifer will ask for a water sample from our findings. Phytoplankton Monitoring Network Harmful Algae Bloom Screening Data Entry Navigate to https://coastalscience.noaa.gov/research/stressor-impacts- mitigation/pmn/data/submit-data-regions/ (using Google Chrome, it can be found on the bookmarks bar), and select Atlantic Region 1. -
Synthèse Et Evaluation De Nouveau Agents De Protection Contre Les Rayonnements Ionisants Brice Nadal
Synthèse et Evaluation de nouveau agents de protection contre les rayonnements ionisants Brice Nadal To cite this version: Brice Nadal. Synthèse et Evaluation de nouveau agents de protection contre les rayonnements ion- isants. Chimie. Université Paris Sud - Paris XI, 2009. Français. tel-00447089 HAL Id: tel-00447089 https://tel.archives-ouvertes.fr/tel-00447089 Submitted on 14 Jan 2010 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. N° D’ORDRE : 9602 UNIVERSITÉ PARIS SUD XI FACULTÉ DES SCIENCES D’ORSAY THÈSE DE DOCTORAT Présentée en vue de l’obtention du grade de DOCTEUR EN SCIENCES DE L’UNIVERSITÉ PARIS SUD XI Spécialité Chimie Organique Par Brice NADAL Ingénieur CPE Lyon Synthèse et évaluation de nouveaux agents de protection contre les rayonnements ionisants Soutenue le 29 octobre 2009 devant la commission d’examen : Professeur Cyrille Kouklovsky Président Docteur Paul-Henri Ducrot Rapporteur Professeur Olivier Piva Rapporteur Docteur Claude Lion Examinateur Docteur Pierre Bischoff Examinateur Docteur Thierry Le Gall Directeur de thèse N° D’ORDRE -
CPR Description
- 1 - The Continuous Plankton Recorder Survey of the North Pacific Sonia D. Batten1 & David W. Welch2 1Sir Alister Hardy Foundation for Ocean Science, Plymouth, UK. [email protected] 2Department of Fisheries and Oceans Canada, Nanaimo, BC. [email protected] Background Zooplankton are a key intermediate trophic group between the primary production in the ocean and fish and larger marine organisms that form valued resources. Large scale routine sampling in the open ocean from research vessels is impractical because of the large costs involved, consequently the north Pacific has been poorly sampled to date. Observed and predicted climate changes, observed large scale changes in Pacific salmon populations and other higher trophic levels all point to a need for large scale monitoring to detect changes in the ocean. The North Pacific Marine Science Organisation (PICES) supported the initiative to begin collecting baseline plankton data at its 1998 annual meeting, through the MONITOR Task team, and has remained closely linked with this program since its commencement in 2000. The eventual aim is a multidisciplinary monitoring program that will allow explanation of the measured variability. The initial proposal sought to make use of existing expertise in the North Atlantic, where the Hardy Continuous Plankton Recorder (CPR) has been deployed from Ships of Opportunity (merchant vessels going about their regular activities) for the last 70 years. Although designed in the 1920s, the CPR is a robust, reliable plankton sampler (Fig 1) that can be deployed and operated at the high speeds of modern commercial vessels (in excess of 20 knots). -
Introduction
Guidance for Assay Development & HTS March 2007 Version 5 Section I: Introduction Introduction Copyright © 2005, Eli Lilly and Company and the National Institutes of Health Chemical Genomics Center. All Rights Reserved. For more information, please review the Privacy Policy and Site Usage and Agreement. Table of Contents A. INTRODUCTION This document is written to provide guidance to investigators that are interested in developing assays useful for the evaluation of compound collections to identify chemical probes that modulate the activity of biological targets. Originally written as a guide for therapeutic projects teams within a major pharmaceutical company, this manual has been adapted to provide guidelines for: a. Identifying potential assay formats compatible with High Throughput Screen (HTS), and Structure Activity Relationship (SAR) b. Developing optimal assay reagents c. Optimizing assay protocol with respect to sensitivity, dynamic range, signal intensity and stability d. Adopting screening assays to automation and scale up in microtiter plate formats e. Statistical validation of the assay performance parameters f. Secondary follow up assays for chemical probe validation and SAR refinement g. Data standards to be followed in reporting screening and SAR assay results. General definition of biological assays This manual is intended to provide guidance in the area of biological assay development, screening and compound evaluation. In this regard an assay is defined by a set of reagents that produce a detectable signal allowing a biological process to be quantified. In general, the quality of an assay is defined by the robustness and reproducibility of this signal in the absence of any test compounds or in the presence of inactive compounds. -
How to Cite Complete Issue More Information About This Article
Acta Biológica Colombiana ISSN: 0120-548X Universidad Nacional de Colombia, Facultad de Ciencias, Departamento de Biología RUIZ GÓMEZ, Anderson; MANCERA PINEDA, José Ernesto POTENTIALLY TOXIC DINOFLAGELLATES ASSOCIATED TO SEAGRASS ON ISLA DE BARÚ, COLOMBIAN CARIBBEAN, DURING EL NIÑO 2015 Acta Biológica Colombiana, vol. 24, no. 1, 2019, January-April, pp. 109-117 Universidad Nacional de Colombia, Facultad de Ciencias, Departamento de Biología DOI: https://doi.org/10.15446/abc.v24n1.61799 Available in: https://www.redalyc.org/articulo.oa?id=319059543009 How to cite Complete issue Scientific Information System Redalyc More information about this article Network of Scientific Journals from Latin America and the Caribbean, Spain and Journal's webpage in redalyc.org Portugal Project academic non-profit, developed under the open access initiative Facultad de Ciencias ACTA BIOLÓGICA COLOMBIANA Departamento de Biología http://www.revistas.unal.edu.co/index.php/actabiol Sede Bogotá ARTÍCULO DE INVESTIGACIÓN / RESEARCH ARTICLE ECOLOGÍA POTENTIALLY TOXIC DINOFLAGELLATES ASSOCIATED TO SEAGRASS ON ISLA DE BARÚ, COLOMBIAN CARIBBEAN, DURING EL NIÑO 2015 Dinoflagelados potencialmente tóxicos asociados a pastos marinos en Isla de Barú, Caribe Colombiano, durante El Niño 2015 Anderson RUIZ GÓMEZ1, José Ernesto MANCERA PINEDA1* 1 Departamento de Biología, Facultad de Ciencias, Universidad Nacional de Colombia, Carrera 30 n°. 45-03, Bogotá, Colombia. *For correspondence: [email protected] Received: 30th December 2016, Returned for revision: 29th May 2018, Accepted: 27th November 2018. Associate Editor: Sergi Sabater. Citation/Citar este artículo como: RUIZ GÓMEZ Anderson, MANCERA PINEDA José Ernesto. Potentially Toxic Dinoflagellates Associated to Seagrass on Isla de Barú, Colombian Caribbean, During El Niño 2015. -
The Evolution of Silicon Transporters in Diatoms1
CORE Metadata, citation and similar papers at core.ac.uk Provided by Woods Hole Open Access Server J. Phycol. 52, 716–731 (2016) © 2016 The Authors. Journal of Phycology published by Wiley Periodicals, Inc. on behalf of Phycological Society of America. This is an open access article under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. DOI: 10.1111/jpy.12441 THE EVOLUTION OF SILICON TRANSPORTERS IN DIATOMS1 Colleen A. Durkin3 Moss Landing Marine Laboratories, 8272 Moss Landing Road, Moss Landing California 95039, USA Julie A. Koester Department of Biology and Marine Biology, University of North Carolina Wilmington, Wilmington North Carolina 28403, USA Sara J. Bender2 Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole Massachusetts 02543, USA and E. Virginia Armbrust School of Oceanography, University of Washington, Seattle Washington 98195, USA Diatoms are highly productive single-celled algae perhaps their dominant ability to take up silicic acid that form an intricately patterned silica cell wall after from seawater in diverse environmental conditions. every cell division. They take up and utilize silicic Key index words: diatoms; gene family; molecular acid from seawater via silicon transporter (SIT) evolution; nutrients; silicon; transporter proteins. This study examined the evolution of the SIT gene family