Suppression of Tumorigenicity-14, Encoding Matriptase, Is a Critical Suppressor of Colitis and Colitis-Associated Colon Carcinogenesis
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Role of S100A8/A9 for Cytokine Secretion, Revealed in Neutrophils Derived from ER-Hoxb8 Progenitors
International Journal of Molecular Sciences Article Role of S100A8/A9 for Cytokine Secretion, Revealed in Neutrophils Derived from ER-Hoxb8 Progenitors Yang Zhou †, Justine Hann †,Véronique Schenten, Sébastien Plançon, Jean-Luc Bueb, Fabrice Tolle ‡ and Sabrina Bréchard *,‡ Department of Life Sciences and Medicine, University of Luxembourg, 6 Avenue du Swing, L-4367 Belvaux, Luxembourg; [email protected] (Y.Z.); [email protected] (J.H.); [email protected] (V.S.); [email protected] (S.P.); [email protected] (J.-L.B.); [email protected] (F.T.) * Correspondence: [email protected]; Tel.: +352-466644-6434 † Both first authors contributed equally to this work. ‡ Both last authors contributed equally to this work. Abstract: S100A9, a Ca2+-binding protein, is tightly associated to neutrophil pro-inflammatory functions when forming a heterodimer with its S100A8 partner. Upon secretion into the extracellular environment, these proteins behave like damage-associated molecular pattern molecules, which actively participate in the amplification of the inflammation process by recruitment and activation of pro-inflammatory cells. Intracellular functions have also been attributed to the S100A8/A9 complex, notably its ability to regulate nicotinamide adenine dinucleotide phosphate (NADPH) oxidase activation. However, the complete functional spectrum of S100A8/A9 at the intracellular level is far from being understood. In this context, we here investigated the possibility that the absence of Citation: Zhou, Y.; Hann, J.; intracellular S100A8/A9 is involved in cytokine secretion. To overcome the difficulty of genetically Schenten, V.; Plançon, S.; Bueb, J.-L.; modifying neutrophils, we used murine neutrophils derived from wild-type and S100A9−/− Hoxb8 Tolle, F.; Bréchard, S. -
Recruitment of Monocytes to the Pre-Ovulatory Ovary Alex Paige Whitaker Eastern Kentucky University
Eastern Kentucky University Encompass Online Theses and Dissertations Student Scholarship January 2016 Recruitment of monocytes to the pre-ovulatory ovary Alex Paige Whitaker Eastern Kentucky University Follow this and additional works at: https://encompass.eku.edu/etd Part of the Biochemistry, Biophysics, and Structural Biology Commons Recommended Citation Whitaker, Alex Paige, "Recruitment of monocytes to the pre-ovulatory ovary" (2016). Online Theses and Dissertations. 445. https://encompass.eku.edu/etd/445 This Open Access Thesis is brought to you for free and open access by the Student Scholarship at Encompass. It has been accepted for inclusion in Online Theses and Dissertations by an authorized administrator of Encompass. For more information, please contact [email protected]. Recruitment of monocytes to the pre-ovulatory ovary By Alex Whitaker Bachelor of Science Eastern Kentucky University Richmond, Kentucky 2013 Submitted to the Faculty of the Graduate School of Eastern Kentucky University in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE May, 2016 Copyright © Alex Whitaker, 2016 All rights reserved ii DEDICATION This thesis is dedicated to my parents Steve and Debby Whitaker for their unwavering encouragement. iii ACKNOWLEDGEMENTS I would like to thank my mentor, Dr. Oliver R. Oakley, for his support, guidance, and help regarding the completion of this project. If not for the many demonstrations of experimental techniques, reassurance when experiments failed, and stimulating ideas and background knowledge, this research may not have been finished. In addition, I would like to thank the other committee members, Dr. Marcia Pierce and Lindsey Calderon for comments and assistance with writing. -
As Myeloid-Derived Suppressor Cells to the Accumulation of Splenocytes That Act Mice Display Aberrant Myelopoiesis Leading
Mast Cell−deficient KitW-sh ''Sash'' Mutant Mice Display Aberrant Myelopoiesis Leading to the Accumulation of Splenocytes That Act as Myeloid-Derived Suppressor Cells This information is current as of September 24, 2021. Anastasija Michel, Andrea Schüler, Pamela Friedrich, Fatma Döner, Tobias Bopp, Markus Radsak, Markus Hoffmann, Manfred Relle, Ute Distler, Jörg Kuharev, Stefan Tenzer, Thorsten B. Feyerabend, Hans-Reimer Rodewald, Hansjörg Schild, Edgar Schmitt, Marc Becker and Michael Stassen Downloaded from J Immunol 2013; 190:5534-5544; Prepublished online 1 May 2013; doi: 10.4049/jimmunol.1203355 http://www.jimmunol.org/content/190/11/5534 http://www.jimmunol.org/ Supplementary http://www.jimmunol.org/content/suppl/2013/05/01/jimmunol.120335 Material 5.DC1 References This article cites 55 articles, 17 of which you can access for free at: http://www.jimmunol.org/content/190/11/5534.full#ref-list-1 by guest on September 24, 2021 Why The JI? Submit online. • Rapid Reviews! 30 days* from submission to initial decision • No Triage! Every submission reviewed by practicing scientists • Fast Publication! 4 weeks from acceptance to publication *average Subscription Information about subscribing to The Journal of Immunology is online at: http://jimmunol.org/subscription Permissions Submit copyright permission requests at: http://www.aai.org/About/Publications/JI/copyright.html Email Alerts Receive free email-alerts when new articles cite this article. Sign up at: http://jimmunol.org/alerts The Journal of Immunology is published twice each month by The American Association of Immunologists, Inc., 1451 Rockville Pike, Suite 650, Rockville, MD 20852 Copyright © 2013 by The American Association of Immunologists, Inc. -
Deimination, Intermediate Filaments and Associated Proteins
International Journal of Molecular Sciences Review Deimination, Intermediate Filaments and Associated Proteins Julie Briot, Michel Simon and Marie-Claire Méchin * UDEAR, Institut National de la Santé Et de la Recherche Médicale, Université Toulouse III Paul Sabatier, Université Fédérale de Toulouse Midi-Pyrénées, U1056, 31059 Toulouse, France; [email protected] (J.B.); [email protected] (M.S.) * Correspondence: [email protected]; Tel.: +33-5-6115-8425 Received: 27 October 2020; Accepted: 16 November 2020; Published: 19 November 2020 Abstract: Deimination (or citrullination) is a post-translational modification catalyzed by a calcium-dependent enzyme family of five peptidylarginine deiminases (PADs). Deimination is involved in physiological processes (cell differentiation, embryogenesis, innate and adaptive immunity, etc.) and in autoimmune diseases (rheumatoid arthritis, multiple sclerosis and lupus), cancers and neurodegenerative diseases. Intermediate filaments (IF) and associated proteins (IFAP) are major substrates of PADs. Here, we focus on the effects of deimination on the polymerization and solubility properties of IF proteins and on the proteolysis and cross-linking of IFAP, to finally expose some features of interest and some limitations of citrullinomes. Keywords: citrullination; post-translational modification; cytoskeleton; keratin; filaggrin; peptidylarginine deiminase 1. Introduction Intermediate filaments (IF) constitute a unique macromolecular structure with a diameter (10 nm) intermediate between those of actin microfilaments (6 nm) and microtubules (25 nm). In humans, IF are found in all cell types and organize themselves into a complex network. They play an important role in the morphology of a cell (including the nucleus), are essential to its plasticity, its mobility, its adhesion and thus to its function. -
Germline Variants in Driver Genes of Breast Cancer and Their Association with Familial and Early-Onset Breast Cancer Risk in a Chilean Population
cancers Article Germline Variants in Driver Genes of Breast Cancer and Their Association with Familial and Early-Onset Breast Cancer Risk in a Chilean Population Alejandro Fernandez-Moya 1, Sebastian Morales 1,* , Trinidad Arancibia 1, Patricio Gonzalez-Hormazabal 1, Julio C. Tapia 2, Raul Godoy-Herrera 1, Jose Miguel Reyes 3, Fernando Gomez 4, Enrique Waugh 4 and Lilian Jara 1,* 1 Programa de Genética Humana, Instituto de Ciencia Biomédicas (ICBM), Facultad de Medicina, Universidad de Chile, Santiago 8380453, Chile; [email protected] (A.F.-M.); [email protected] (T.A.); [email protected] (P.G.-H.); [email protected] (R.G.-H.) 2 Laboratorio de Transformación Celular, Departamento de Oncología Básico Clínica, Facultad de Medicina, Universidad de Chile, Santiago 8380453, Chile; [email protected] 3 Clínica Las Condes, Santiago 7591047, Chile; [email protected] 4 Clínica Santa María, Santiago 7520378, Chile; [email protected] (F.G.); [email protected] (E.W.) * Correspondence: [email protected] (S.M.); [email protected] (L.J.); Tel.: +56-9-98292094 (L.J.) Received: 11 September 2019; Accepted: 19 November 2019; Published: 20 January 2020 Abstract: The genetic variations responsible for tumorigenesis are called driver mutations. In breast cancer (BC), two studies have demonstrated that germline mutations in driver genes linked to sporadic tumors may also influence BC risk. The present study evaluates the association between SNPs and SNP-SNP interaction in driver genes TTN (rs10497520), TBX3 (rs2242442), KMT2D (rs11168827), and MAP3K1 (rs702688 and rs702689) with BC risk in BRCA1/2-negative Chilean families. The SNPs were genotyped in 489 BC cases and 1078 controls by TaqMan Assay. -
Suppressor of Cytokine Signaling-1 Peptidomimetic Limits Progression of Diabetic Nephropathy
BASIC RESEARCH www.jasn.org Suppressor of Cytokine Signaling-1 Peptidomimetic Limits Progression of Diabetic Nephropathy †‡ † †‡ † † Carlota Recio,* Iolanda Lazaro,* Ainhoa Oguiza,* Laura Lopez-Sanz,* Susana Bernal,* †‡ †‡ Julia Blanco,§ Jesus Egido, and Carmen Gomez-Guerrero* *Renal and Vascular Inflammation Group and †Division of Nephrology and Hypertension, Fundacion Jimenez Diaz University Hospital-Health Research Institute, Autonoma University of Madrid; ‡Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders; and §Department of Pathology, Hospital Clinico San Carlos, Madrid, Spain ABSTRACT Diabetes is the main cause of CKD and ESRD worldwide. Chronic activation of Janus kinase and signal transducer and activator of transcription (STAT) signaling contributes to diabetic nephropathy by inducing genes involved in leukocyte infiltration, cell proliferation, and extracellular matrix accumulation. This study examined whether a cell-permeable peptide mimicking the kinase-inhibitory region of suppressor of cy- tokine signaling-1 (SOCS1) regulatory protein protects against nephropathy by suppressing STAT-mediated cell responses to diabetic conditions. In a mouse model combining hyperglycemia and hypercholesterolemia (streptozotocin diabetic, apoE-deficient mice), renal STAT activation status correlated with the severity of nephropathy. Notably, compared with administration of vehicle or mutant inactive peptide, administration of the SOCS1 peptidomimetic at either early or advanced stages of diabetes ameliorated STAT activity and resulted in reduced serum creatinine level, albuminuria, and renal histologic changes (mesangial expansion, tubular injury, and fibrosis) over time. Mice treated with the SOCS1 peptidomimetic also exhibited reduced kidney leukocyte recruitment (T lymphocytes and classic M1 proinflammatory macrophages) and decreased expression levels of proinflammatory and profibrotic markers that were independent of glycemic and lipid changes. -
MALE Protein Name Accession Number Molecular Weight CP1 CP2 H1 H2 PDAC1 PDAC2 CP Mean H Mean PDAC Mean T-Test PDAC Vs. H T-Test
MALE t-test t-test Accession Molecular H PDAC PDAC vs. PDAC vs. Protein Name Number Weight CP1 CP2 H1 H2 PDAC1 PDAC2 CP Mean Mean Mean H CP PDAC/H PDAC/CP - 22 kDa protein IPI00219910 22 kDa 7 5 4 8 1 0 6 6 1 0.1126 0.0456 0.1 0.1 - Cold agglutinin FS-1 L-chain (Fragment) IPI00827773 12 kDa 32 39 34 26 53 57 36 30 55 0.0309 0.0388 1.8 1.5 - HRV Fab 027-VL (Fragment) IPI00827643 12 kDa 4 6 0 0 0 0 5 0 0 - 0.0574 - 0.0 - REV25-2 (Fragment) IPI00816794 15 kDa 8 12 5 7 8 9 10 6 8 0.2225 0.3844 1.3 0.8 A1BG Alpha-1B-glycoprotein precursor IPI00022895 54 kDa 115 109 106 112 111 100 112 109 105 0.6497 0.4138 1.0 0.9 A2M Alpha-2-macroglobulin precursor IPI00478003 163 kDa 62 63 86 72 14 18 63 79 16 0.0120 0.0019 0.2 0.3 ABCB1 Multidrug resistance protein 1 IPI00027481 141 kDa 41 46 23 26 52 64 43 25 58 0.0355 0.1660 2.4 1.3 ABHD14B Isoform 1 of Abhydrolase domain-containing proteinIPI00063827 14B 22 kDa 19 15 19 17 15 9 17 18 12 0.2502 0.3306 0.7 0.7 ABP1 Isoform 1 of Amiloride-sensitive amine oxidase [copper-containing]IPI00020982 precursor85 kDa 1 5 8 8 0 0 3 8 0 0.0001 0.2445 0.0 0.0 ACAN aggrecan isoform 2 precursor IPI00027377 250 kDa 38 30 17 28 34 24 34 22 29 0.4877 0.5109 1.3 0.8 ACE Isoform Somatic-1 of Angiotensin-converting enzyme, somaticIPI00437751 isoform precursor150 kDa 48 34 67 56 28 38 41 61 33 0.0600 0.4301 0.5 0.8 ACE2 Isoform 1 of Angiotensin-converting enzyme 2 precursorIPI00465187 92 kDa 11 16 20 30 4 5 13 25 5 0.0557 0.0847 0.2 0.4 ACO1 Cytoplasmic aconitate hydratase IPI00008485 98 kDa 2 2 0 0 0 0 2 0 0 - 0.0081 - 0.0 -
Mutant‑Allele Tumor Heterogeneity in Malignant Glioma Effectively Predicts Neoplastic Recurrence
6108 ONCOLOGY LETTERS 18: 6108-6116, 2019 Mutant‑allele tumor heterogeneity in malignant glioma effectively predicts neoplastic recurrence PENGFEI WU, WEI YANG, JIANXING MA, JINGYU ZHANG, MAOJUN LIAO, LUNSHAN XU, MINHUI XU and LIANG YI Department of Neurosurgery, Daping Hospital and Institute Research of Surgery, Army Medical University, Chongqing 400042, P.R. China Received March 13, 2019; Accepted September 6, 2019 DOI: 10.3892/ol.2019.10978 Abstract. Intra-tumor heterogeneity (ITH) is one of the most RFS of patients with glioma. In conclusion, the MATH value important causes of therapy resistance, which eventually of a patient may be an independent predictor that influences leads to the poor outcomes observed in patients with glioma. glioma recurrence. The nomogram model presented in the Mutant-allele tumor heterogeneity (MATH) values are based current study was an appropriate method to predict 1-, 2- and on whole‑exon sequencing and precisely reflect genetic ITH. 5-year RFS probabilities in patients with glioma. However, the significance of MATH values in predicting glioma recurrence remains unclear. Information of patients Introduction with glioma was obtained from The Cancer Genome Atlas database. The present study calculated the MATH value for Glioma is the most common primary malignant tumor in each patient, analyzed the distributions of MATH values the central nervous system (1). Despite surgery and radio- in different subtypes and investigated the rates of clinical therapy, chemotherapy and targeted therapy, the majority of recurrence in patients with different MATH values. Gene malignant gliomas still recur (2,3), which is primarily due enrichment and Cox regression analyses were performed to to chemo-radiotherapy resistance (4). -
Cutaneous Manifestations of Systemic Disease
Updates on Canine Atopic Dermatitis Karen L. Campbell, DVM, MS, DACVIM, DACVD Professor Emerita, University of Illinois Clinical Professor of Dermatology, University of Missouri Allergies in dogs Atopic Dermatitis • Affects 10-15% of dogs • Pathogenesis – Genetics – Immunological – Structural • Risk factors – Breed – Environment – Birthdate Implications: not a homogenous disease—many factors involved Genetics of Atopic Dermatitis • Breeds predisposed • Terriers, setters, beagles, boxers, Lhaso Apso, pug, bulldogs, miniature schnauzer, retrievers, Dalmatian, GSD, others • Breeding study (labs, retrievers) • 2 atopic parents: 65% offspring atopic • 1 atopic 1 normal: 57% offspring atopic • 2 normal parents: 11% offspring atopic Implication – ideal not to breed affected dogs Gene Mutations & AD • Filaggrin • Plakophilin 2 • SPINK5 • PPARγ • IgA deficiency (GSD) • Pro-inflammatory • S100A8 • INPPL1 • DPP4 Marsella R et al: TEM studies in experimental model of K9 AD. Vet Derm 21:81-88, 2010. Implications: not a homogenous disease, many targets for treatment, effectiveness of treatment may vary depending on cause in the individual dog Skin Barrier Dysfunction in AD Immunology of Atopy • Allergen exposure • Predominantly percutaneous • Increased absorption of allergens in dogs with defective skin barrier function • Antigen Processing Cells: • Langerhans cells and keratinocytes in skin • Present antigens to T- helper and B-cells to stimulate Ig production • Sites of Ig production • regional lymph nodes Immunological Imbalances in Atopy • Increased -
Organization, Evolution and Functions of the Human and Mouse Ly6/Upar Family Genes Chelsea L
Loughner et al. Human Genomics (2016) 10:10 DOI 10.1186/s40246-016-0074-2 GENE FAMILY UPDATE Open Access Organization, evolution and functions of the human and mouse Ly6/uPAR family genes Chelsea L. Loughner1, Elspeth A. Bruford2, Monica S. McAndrews3, Emili E. Delp1, Sudha Swamynathan1 and Shivalingappa K. Swamynathan1,4,5,6,7* Abstract Members of the lymphocyte antigen-6 (Ly6)/urokinase-type plasminogen activator receptor (uPAR) superfamily of proteins are cysteine-rich proteins characterized by a distinct disulfide bridge pattern that creates the three-finger Ly6/uPAR (LU) domain. Although the Ly6/uPAR family proteins share a common structure, their expression patterns and functions vary. To date, 35 human and 61 mouse Ly6/uPAR family members have been identified. Based on their subcellular localization, these proteins are further classified as GPI-anchored on the cell membrane, or secreted. The genes encoding Ly6/uPAR family proteins are conserved across different species and are clustered in syntenic regions on human chromosomes 8, 19, 6 and 11, and mouse Chromosomes 15, 7, 17, and 9, respectively. Here, we review the human and mouse Ly6/uPAR family gene and protein structure and genomic organization, expression, functions, and evolution, and introduce new names for novel family members. Keywords: Ly6/uPAR family, LU domain, Three-finger domain, uPAR, Lymphocytes, Neutrophils Introduction an overview of the Ly6/uPAR gene family and their gen- The lymphocyte antigen-6 (Ly6)/urokinase-type plas- omic organization, evolution, as well as functions, and minogen activator receptor (uPAR) superfamily of struc- provide a nomenclature system for the newly identified turally related proteins is characterized by the LU members of this family. -
Notch and TLR Signaling Coordinate Monocyte Cell Fate and Inflammation
RESEARCH ARTICLE Notch and TLR signaling coordinate monocyte cell fate and inflammation Jaba Gamrekelashvili1,2*, Tamar Kapanadze1,2, Stefan Sablotny1,2, Corina Ratiu3, Khaled Dastagir1,4, Matthias Lochner5,6, Susanne Karbach7,8,9, Philip Wenzel7,8,9, Andre Sitnow1,2, Susanne Fleig1,2, Tim Sparwasser10, Ulrich Kalinke11,12, Bernhard Holzmann13, Hermann Haller1, Florian P Limbourg1,2* 1Vascular Medicine Research, Hannover Medical School, Hannover, Germany; 2Department of Nephrology and Hypertension, Hannover Medical School, Hannover, Germany; 3Institut fu¨ r Kardiovaskula¨ re Physiologie, Fachbereich Medizin der Goethe-Universita¨ t Frankfurt am Main, Frankfurt am Main, Germany; 4Department of Plastic, Aesthetic, Hand and Reconstructive Surgery, Hannover Medical School, Hannover, Germany; 5Institute of Medical Microbiology and Hospital Epidemiology, Hannover Medical School, Hannover, Germany; 6Mucosal Infection Immunology, TWINCORE, Centre for Experimental and Clinical Infection Research, Hannover, Germany; 7Center for Cardiology, Cardiology I, University Medical Center of the Johannes Gutenberg-University Mainz, Mainz, Germany; 8Center for Thrombosis and Hemostasis, University Medical Center of the Johannes Gutenberg-University Mainz, Mainz, Germany; 9German Center for Cardiovascular Research (DZHK), Partner Site Rhine Main, Mainz, Germany; 10Department of Medical Microbiology and Hygiene, Medical Center of the Johannes Gutenberg- University of Mainz, Mainz, Germany; 11Institute for Experimental Infection Research, TWINCORE, Centre for -
Supplementary Table 1
Supplementary Table 1. 492 genes are unique to 0 h post-heat timepoint. The name, p-value, fold change, location and family of each gene are indicated. Genes were filtered for an absolute value log2 ration 1.5 and a significance value of p ≤ 0.05. Symbol p-value Log Gene Name Location Family Ratio ABCA13 1.87E-02 3.292 ATP-binding cassette, sub-family unknown transporter A (ABC1), member 13 ABCB1 1.93E-02 −1.819 ATP-binding cassette, sub-family Plasma transporter B (MDR/TAP), member 1 Membrane ABCC3 2.83E-02 2.016 ATP-binding cassette, sub-family Plasma transporter C (CFTR/MRP), member 3 Membrane ABHD6 7.79E-03 −2.717 abhydrolase domain containing 6 Cytoplasm enzyme ACAT1 4.10E-02 3.009 acetyl-CoA acetyltransferase 1 Cytoplasm enzyme ACBD4 2.66E-03 1.722 acyl-CoA binding domain unknown other containing 4 ACSL5 1.86E-02 −2.876 acyl-CoA synthetase long-chain Cytoplasm enzyme family member 5 ADAM23 3.33E-02 −3.008 ADAM metallopeptidase domain Plasma peptidase 23 Membrane ADAM29 5.58E-03 3.463 ADAM metallopeptidase domain Plasma peptidase 29 Membrane ADAMTS17 2.67E-04 3.051 ADAM metallopeptidase with Extracellular other thrombospondin type 1 motif, 17 Space ADCYAP1R1 1.20E-02 1.848 adenylate cyclase activating Plasma G-protein polypeptide 1 (pituitary) receptor Membrane coupled type I receptor ADH6 (includes 4.02E-02 −1.845 alcohol dehydrogenase 6 (class Cytoplasm enzyme EG:130) V) AHSA2 1.54E-04 −1.6 AHA1, activator of heat shock unknown other 90kDa protein ATPase homolog 2 (yeast) AK5 3.32E-02 1.658 adenylate kinase 5 Cytoplasm kinase AK7