bioRxiv preprint doi: https://doi.org/10.1101/2019.12.14.876516; this version posted December 15, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Distinct transcriptomic cell types and neural circuits of the subiculum and prosubiculum along 2 the dorsal-ventral axis 3 4 Song-Lin Ding1,2,*, Zizhen Yao1, Karla E. Hirokawa1, Thuc Nghi Nguyen1, Lucas T. Graybuck1, Olivia 5 Fong1, Phillip Bohn1, Kiet Ngo1, Kimberly A. Smith1, Christof Koch1, John W. Phillips1, Ed S. Lein1, 6 Julie A. Harris1, Bosiljka Tasic1, Hongkui Zeng1 7 8 1Allen Institute for Brain Science, Seattle, WA 98109, USA 9 10 2Lead Contact 11 12 *Correspondence:
[email protected] (SLD) 13 14 15 Highlights 16 17 1. 27 transcriptomic cell types identified in and spatially registered to “subicular” regions. 18 2. Anatomic borders of “subicular” regions reliably determined along dorsal-ventral axis. 19 3. Distinct cell types and circuits of full-length subiculum (Sub) and prosubiculum (PS). 20 4. Brain-wide cell-type specific projections of Sub and PS revealed with specific Cre-lines. 21 22 23 In Brief 24 25 Ding et al. show that mouse subiculum and prosubiculum are two distinct regions with differential 26 transcriptomic cell types, subtypes, neural circuits and functional correlation. The former has obvious 27 topographic projections to its main targets while the latter exhibits widespread projections to many 28 subcortical regions associated with reward, emotion, stress and motivation.