Stable Isotopes and the Ecology and Physiology of Reptiles

Total Page:16

File Type:pdf, Size:1020Kb

Stable Isotopes and the Ecology and Physiology of Reptiles Utah State University DigitalCommons@USU All Graduate Theses and Dissertations Graduate Studies 5-2016 Stable Isotopes and the Ecology and Physiology of Reptiles Andrew M. Durso Utah State University Follow this and additional works at: https://digitalcommons.usu.edu/etd Part of the Biology Commons Recommended Citation Durso, Andrew M., "Stable Isotopes and the Ecology and Physiology of Reptiles" (2016). All Graduate Theses and Dissertations. 5064. https://digitalcommons.usu.edu/etd/5064 This Dissertation is brought to you for free and open access by the Graduate Studies at DigitalCommons@USU. It has been accepted for inclusion in All Graduate Theses and Dissertations by an authorized administrator of DigitalCommons@USU. For more information, please contact [email protected]. STABLE ISOTOPES AND THE ECOLOGY AND PHYSIOLOGY OF REPTILES by Andrew M. Durso A dissertation submitted in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY in Biology Approved: ______________________ ______________________ Susannah S. French Alan H. Savitzky Major Professor Committee Member ______________________ ______________________ Edmund D. Brodie Lise M. Aubry Committee Member Committee Member ______________________ ______________________ Daniel A. Warner Mark McLellan Committee Member Vice President for Research and Dean of the School of Graduate Studies UTAH STATE UNIVERSITY Logan, Utah 2016 ii Copyright © Andrew M. Durso 2016 All Rights Reserved iii ABSTRACT Stable Isotopes and the Ecology and Physiology of Reptiles by Andrew M. Durso, Doctor of Philosophy Utah State University, 2016 Major Professor: Dr. Susannah S. French Department: Biology Animals trade-off limited resources among competing demands. Trade-offs are difficult to quantify because it is challenging to measure investment into disparate physiological systems using a common scale. Additionally, biologists desire methods to more precisely measure energy status in wild animals. I used stable isotopes to help solve both of these problems. I examined natural spatial and temporal variation in stable isotope signatures of wild lizards and found significant variation. In the lab, I was able to demonstrate the utility of nitrogen stable isotope ratios of uric acid pellets for measuring nutritional stress. By tracing labeled amino acids through the bodies of gravid female lizards, I demonstrated that vitellogenesis and wound healing compete for amino acids and quantified the direction and magnitude of the trade-offs. I showed that reproductive-immune trade-offs vary based on reproductive stage and energy availability, have effects on metabolism and immune function, and are influenced by hormonal mechanisms. My findings shed light on the interconnectedness of stable isotope endpoints and key physiological systems in animals. I showed that isotopic signatures of physiological stress can be reflected at a large scale in natural populations, and I made novel measurements of the size and direction of trade-offs, which were formerly limited to physiological and performance outcomes. (160 pages) iv PUBLIC ABSTRACT Stable Isotopes and the Ecology and Physiology of Reptiles Andrew M. Durso When animals don’t have enough food, they have to “choose” between “spending” their limited energy on themselves or on their offspring. Biologists think that reptiles can make this choice quickly in response to different environments. But, it can be hard to study these choices because it is hard to convert between, for example, the number of eggs laid and the speed of healing a wound. By using stable isotope chemistry, we can collect more detailed and comparable information about how lizards and other animals spend their limited resources than with any other method. For example, lizards in the wild have similar stable isotope signatures to nearby plants and insects, because their bodies are built out of these foods. In the lab, the stable isotope signatures of lizard “pee” (uric acid) change in predictable ways when they are hungry. We could essentially measure how hungry a wild lizard is by looking at the stable isotope signatures of its uric acid. We can also use a stable isotope “spike” to track where resources go within a lizard’s body. Because protein from food is used for both healing wounds and creating egg yolk, we can measure which of these is a greater priority for lizards by examining the amount of our stable isotope spike that ends up in both places. I found that lizards make different choices under different circumstances; in particular, their stage of pregnancy had a strong effect on how much protein they put into their eggs. This technique could be used on any animal, isn’t very expensive, and could help us learn a lot more about exactly how our bodies, and those of other animals, work. v ACKNOWLEDGMENTS During the course of this dissertation, I received funding, directly or indirectly, from the National Science Foundation, USDA Agricultural Research Service, USU College of Science, USU Department of Biology, USU Ecology Center, and Utah Public Radio. Wild lizards were collected under the authority of Utah State Department of Wildlife Resources COR #1COLL8382 and handled in accordance with USU IACUC protocol #2068. I received generous technical and logistical support with mass spectrometry from John Stark, Kendal Morris, Katrina Slabaugh, and Tom Maddox. Michael Angilletta and Dale DeNardo provided support to Geoff Smith as he collected respirometry data at Arizona State University. Michael Piep and Carlee Coleman helped me with plant identification, and James Pitts helped me with insect identification. Susan Durham advised me on statistics. I had the privilege of working with several wonderful lab assistants, especially Sydney Greenfield and Cheyne Warren, but also Sabrina Anderson, Tyler Hansen, Heather Jones, Kati Mattinson, Sarah Mueller, and Taylor Pettit. I also enjoyed the company and help of numerous field assistants, including Alex Berryman, Jennica Blasi, Trevor Brown, Naomi Clements, Holly Flann, Dacia Hunter, Jenny Kordosky, Georgia Kosmala, Nick Kiriazis, John Pettit, Austin Spence, Marilize van der Walt, Richard Walker, Eleanor Watson, and Julianne Wood. I wish to thank my advisor, Susannah French, and my committee members, Al Savitzky, Butch Brodie, Lise Aubry, and Dan Warner, for their mentorship and support. Their graduate students and my friends, Lori Neuman-Lee, Geoff Smith, Alison Webb, Spencer Hudson, Shab Mohammadi, and Gareth Hopkins, were indispensable companions in the field and lab. USU Biology faculty Marty Crump and Nancy Huntly mentored me in numerous ways. Finally, I wish to thank my partner, Kendal Morris, and my family, especially my mother Sandy Durso, father Paul Durso, and brother Kevin Durso, for their love and support in all things. vi CONTENTS Page ABSTRACT ......................................................................................................................... iii PUBLIC ABSTRACT............................................................................................................ iv ACKNOWLEDGMENTS ....................................................................................................... v LIST OF TABLES ...............................................................................................................viii LIST OF FIGURES ............................................................................................................... ix CHAPTER 1. INTRODUCTION ...................................................................................................... 1 A Stable Isotope Primer .............................................................................................. 1 Stable Isotopes and Animal Physiology........................................................................ 2 Trade-offs in Animal Physiology ................................................................................. 4 Natural Abundance Variation in Stable Isotope Ratios .................................................. 5 Stable Isotope Tracer Experiments ............................................................................... 7 Reptiles...................................................................................................................... 7 Dissertation Overview................................................................................................. 9 References ............................................................................................................... 12 2. STOICHIOMETRIC AND STABLE ISOTOPE RATIOS SUPPORT STRESS PHYSIOLOGY OF WILD LIZARDS IN AN URBAN LANDSCAPE ........................ 22 Introduction ............................................................................................................. 22 Methods ................................................................................................................... 25 Results ..................................................................................................................... 28 Tables and Figures.................................................................................................... 29 Discussion................................................................................................................ 40 References ............................................................................................................... 44 3. STABLE ISOTOPE RATIOS OUTPERFORM OTHER PHYSIOLOGICAL ENDPOINTS OF NUTRITIONAL STRESS .............................................................
Recommended publications
  • Xenosaurus Tzacualtipantecus. the Zacualtipán Knob-Scaled Lizard Is Endemic to the Sierra Madre Oriental of Eastern Mexico
    Xenosaurus tzacualtipantecus. The Zacualtipán knob-scaled lizard is endemic to the Sierra Madre Oriental of eastern Mexico. This medium-large lizard (female holotype measures 188 mm in total length) is known only from the vicinity of the type locality in eastern Hidalgo, at an elevation of 1,900 m in pine-oak forest, and a nearby locality at 2,000 m in northern Veracruz (Woolrich- Piña and Smith 2012). Xenosaurus tzacualtipantecus is thought to belong to the northern clade of the genus, which also contains X. newmanorum and X. platyceps (Bhullar 2011). As with its congeners, X. tzacualtipantecus is an inhabitant of crevices in limestone rocks. This species consumes beetles and lepidopteran larvae and gives birth to living young. The habitat of this lizard in the vicinity of the type locality is being deforested, and people in nearby towns have created an open garbage dump in this area. We determined its EVS as 17, in the middle of the high vulnerability category (see text for explanation), and its status by the IUCN and SEMAR- NAT presently are undetermined. This newly described endemic species is one of nine known species in the monogeneric family Xenosauridae, which is endemic to northern Mesoamerica (Mexico from Tamaulipas to Chiapas and into the montane portions of Alta Verapaz, Guatemala). All but one of these nine species is endemic to Mexico. Photo by Christian Berriozabal-Islas. amphibian-reptile-conservation.org 01 June 2013 | Volume 7 | Number 1 | e61 Copyright: © 2013 Wilson et al. This is an open-access article distributed under the terms of the Creative Com- mons Attribution–NonCommercial–NoDerivs 3.0 Unported License, which permits unrestricted use for non-com- Amphibian & Reptile Conservation 7(1): 1–47.
    [Show full text]
  • Aquiloeurycea Scandens (Walker, 1955). the Tamaulipan False Brook Salamander Is Endemic to Mexico
    Aquiloeurycea scandens (Walker, 1955). The Tamaulipan False Brook Salamander is endemic to Mexico. Originally described from caves in the Reserva de la Biósfera El Cielo in southwestern Tamaulipas, this species later was reported from a locality in San Luis Potosí (Johnson et al., 1978) and another in Coahuila (Lemos-Espinal and Smith, 2007). Frost (2015) noted, however, that specimens from areas remote from the type locality might be unnamed species. This individual was found in an ecotone of cloud forest and pine-oak forest near Ejido La Gloria, in the municipality of Gómez Farías. Wilson et al. (2013b) determined its EVS as 17, placing it in the middle portion of the high vulnerability category. Its conservation status has been assessed as Vulnerable by IUCN, and as a species of special protection by SEMARNAT. ' © Elí García-Padilla 42 www.mesoamericanherpetology.com www.eaglemountainpublishing.com The herpetofauna of Tamaulipas, Mexico: composition, distribution, and conservation status SERGIO A. TERÁN-JUÁREZ1, ELÍ GARCÍA-PADILLA2, VICENTE Mata-SILva3, JERRY D. JOHNSON3, AND LARRY DavID WILSON4 1División de Estudios de Posgrado e Investigación, Instituto Tecnológico de Ciudad Victoria, Boulevard Emilio Portes Gil No. 1301 Pte. Apartado postal 175, 87010, Ciudad Victoria, Tamaulipas, Mexico. Email: [email protected] 2Oaxaca de Juárez, Oaxaca, Código Postal 68023, Mexico. E-mail: [email protected] 3Department of Biological Sciences, The University of Texas at El Paso, El Paso, Texas 79968-0500, United States. E-mails: [email protected] and [email protected] 4Centro Zamorano de Biodiversidad, Escuela Agrícola Panamericana Zamorano, Departamento de Francisco Morazán, Honduras. E-mail: [email protected] ABSTRACT: The herpetofauna of Tamaulipas, the northeasternmost state in Mexico, is comprised of 184 species, including 31 anurans, 13 salamanders, one crocodylian, 124 squamates, and 15 turtles.
    [Show full text]
  • Squamate Reptiles Challenge Paradigms of Genomic Repeat Element Evolution Set by Birds and Mammals
    ARTICLE DOI: 10.1038/s41467-018-05279-1 OPEN Squamate reptiles challenge paradigms of genomic repeat element evolution set by birds and mammals Giulia I.M. Pasquesi1, Richard H. Adams1, Daren C. Card 1, Drew R. Schield1, Andrew B. Corbin1, Blair W. Perry1, Jacobo Reyes-Velasco1,2, Robert P. Ruggiero2, Michael W. Vandewege3, Jonathan A. Shortt4 & Todd A. Castoe1 1234567890():,; Broad paradigms of vertebrate genomic repeat element evolution have been largely shaped by analyses of mammalian and avian genomes. Here, based on analyses of genomes sequenced from over 60 squamate reptiles (lizards and snakes), we show that patterns of genomic repeat landscape evolution in squamates challenge such paradigms. Despite low variance in genome size, squamate genomes exhibit surprisingly high variation among spe- cies in abundance (ca. 25–73% of the genome) and composition of identifiable repeat ele- ments. We also demonstrate that snake genomes have experienced microsatellite seeding by transposable elements at a scale unparalleled among eukaryotes, leading to some snake genomes containing the highest microsatellite content of any known eukaryote. Our analyses of transposable element evolution across squamates also suggest that lineage-specific var- iation in mechanisms of transposable element activity and silencing, rather than variation in species-specific demography, may play a dominant role in driving variation in repeat element landscapes across squamate phylogeny. 1 Department of Biology, University of Texas at Arlington, 501S. Nedderman Drive, Arlington, TX 76019, USA. 2 Department of Biology, New York University Abu Dhabi, Saadiyat Island, United Arab Emirates. 3 Department of Biology, Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA 19122, USA.
    [Show full text]
  • Stable Isotope Methods in Biological and Ecological Studies of Arthropods
    eea_572.fm Page 3 Tuesday, June 12, 2007 4:17 PM DOI: 10.1111/j.1570-7458.2007.00572.x Blackwell Publishing Ltd MINI REVIEW Stable isotope methods in biological and ecological studies of arthropods CORE Rebecca Hood-Nowotny1* & Bart G. J. Knols1,2 Metadata, citation and similar papers at core.ac.uk Provided by Wageningen University & Research Publications 1International Atomic Energy Agency (IAEA), Agency’s Laboratories Seibersdorf, A-2444 Seibersdorf, Austria, 2Laboratory of Entomology, Wageningen University and Research Centre, P.O. Box 8031, 6700 EH Wageningen, The Netherlands Accepted: 13 February 2007 Key words: marking, labelling, enrichment, natural abundance, resource turnover, 13-carbon, 15-nitrogen, 18-oxygen, deuterium, mass spectrometry Abstract This is an eclectic review and analysis of contemporary and promising stable isotope methodologies to study the biology and ecology of arthropods. It is augmented with literature from other disciplines, indicative of the potential for knowledge transfer. It is demonstrated that stable isotopes can be used to understand fundamental processes in the biology and ecology of arthropods, which range from nutrition and resource allocation to dispersal, food-web structure, predation, etc. It is concluded that falling costs and reduced complexity of isotope analysis, besides the emergence of new analytical methods, are likely to improve access to isotope technology for arthropod studies still further. Stable isotopes pose no environmental threat and do not change the chemistry or biology of the target organism or system. These therefore represent ideal tracers for field and ecophysiological studies, thereby avoiding reductionist experimentation and encouraging more holistic approaches. Con- sidering (i) the ease with which insects and other arthropods can be marked, (ii) minimal impact of the label on their behaviour, physiology, and ecology, and (iii) environmental safety, we advocate more widespread application of stable isotope technology in arthropod studies and present a variety of potential uses.
    [Show full text]
  • UN CASO CLÍNICO DE ENVENENAMIENTO POR LA SERPIENTE Coniophanes Piceivittis COPE, EN HONDURAS Leonel Marineros¹ Y Edgardo Marineros-Banegas²
    Marineros, L. y E. Marineros-Banegas, 2019 UN CASO CLÍNICO DE ENVENENAMIENTO POR LA SERPIENTE Coniophanes piceivittis COPE, EN HONDURAS Leonel Marineros¹ y Edgardo Marineros-Banegas² ¹ Biólogo especialista en Vida Silvestre, investigador asociado al INCEBIO ² Facultad de Medicina, UNAH causing mild poisoning, characterized by Recibido: 23 de septiembre del 2019 inflammation and burning that can confuse Aceptado: 20 de diciembre del 2019 medical emergency care personnel; as if it Publicado: 31 de diciembre del 2019 were a bite by a vipérid. In this note, there Autor de correspondencia: Leonel Marineros: [email protected] is an official accident caused by the bite of Cita: Marineros, L. y E. Marineros- the snake Coniophanes piceivittis, known Banegas. 2019. Un caso clínico de as "guardacaninos black" happened on the envenenamiento por la serpiente periphery of Tegucigalpa. It is estimated as Coniophanes piceivittis Cope, En a moderate degree, the effects and clinical Honduras. Scientia hondurensis:2(2):29-33 care provided until the end of the symptoms are described. RESUMEN KEY WORDS: Colubrid, opistoglifa, Muchos colúbridos, conocidos como no toxic saliva, snake management venenosos, presentan saliva tóxica, aunque no mortal, sus componentes son capaces Los accidentes ofídicos representan un de causar un envenenamiento leve, serio problema de salud pública a nivel caracterizado por inflamación y ardor que mundial. Se estima que en Honduras puede confundir al personal de atención de ocurren más de 100 casos anuales, muchos emergencias médicas; como si se tratase de los cuales llegan a ser fatales; sin de una mordedura por un vipérido. En esta embargo, esta estadística no corresponde a nota, se presenta un accidente ofídico la realidad, ya que muchos de estos ocasionado por la mordedura de la accidentes no son registrados en las serpiente Coniophanes piceivittis, estadísticas hospitalarias (Marineros et al., conocida como “guardacaminos negra” 2012).
    [Show full text]
  • Xenosaurus Tzacualtipantecus. the Zacualtipán Knob-Scaled Lizard Is Endemic to the Sierra Madre Oriental of Eastern Mexico
    Xenosaurus tzacualtipantecus. The Zacualtipán knob-scaled lizard is endemic to the Sierra Madre Oriental of eastern Mexico. This medium-large lizard (female holotype measures 188 mm in total length) is known only from the vicinity of the type locality in eastern Hidalgo, at an elevation of 1,900 m in pine-oak forest, and a nearby locality at 2,000 m in northern Veracruz (Woolrich- Piña and Smith 2012). Xenosaurus tzacualtipantecus is thought to belong to the northern clade of the genus, which also contains X. newmanorum and X. platyceps (Bhullar 2011). As with its congeners, X. tzacualtipantecus is an inhabitant of crevices in limestone rocks. This species consumes beetles and lepidopteran larvae and gives birth to living young. The habitat of this lizard in the vicinity of the type locality is being deforested, and people in nearby towns have created an open garbage dump in this area. We determined its EVS as 17, in the middle of the high vulnerability category (see text for explanation), and its status by the IUCN and SEMAR- NAT presently are undetermined. This newly described endemic species is one of nine known species in the monogeneric family Xenosauridae, which is endemic to northern Mesoamerica (Mexico from Tamaulipas to Chiapas and into the montane portions of Alta Verapaz, Guatemala). All but one of these nine species is endemic to Mexico. Photo by Christian Berriozabal-Islas. Amphib. Reptile Conserv. | http://redlist-ARC.org 01 June 2013 | Volume 7 | Number 1 | e61 Copyright: © 2013 Wilson et al. This is an open-access article distributed under the terms of the Creative Com- mons Attribution–NonCommercial–NoDerivs 3.0 Unported License, which permits unrestricted use for non-com- Amphibian & Reptile Conservation 7(1): 1–47.
    [Show full text]
  • Measurement of the Isotopic Composition of Dissolved Iron in the Open Ocean F
    Measurement of the isotopic composition of dissolved iron in the open ocean F. Lacan, Amandine Radic, Catherine Jeandel, Franck Poitrasson, Géraldine Sarthou, Catherine Pradoux, Remi Freydier To cite this version: F. Lacan, Amandine Radic, Catherine Jeandel, Franck Poitrasson, Géraldine Sarthou, et al.. Measure- ment of the isotopic composition of dissolved iron in the open ocean. Geophysical Research Letters, American Geophysical Union, 2008, pp.L24610. 10.1029/2008GL035841. hal-00399111 HAL Id: hal-00399111 https://hal.archives-ouvertes.fr/hal-00399111 Submitted on 15 Jul 2009 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. 1 Measurement of the Isotopic Composition of dissolved Iron in the Open Ocean 2 3 Lacan1 F., Radic1 A., Jeandel1 C., Poitrasson2 F., Sarthou3 G., Pradoux1 C., Freydier2 R. 4 5 1: CNRS, LEGOS, UMR5566, CNRS-CNES-IRD-UPS, Observatoire Midi-Pyrénées, 18, Av. 6 E. Belin, 31400 Toulouse, France. 7 2: LMTG, CNRS-UPS-IRD, 14-16, avenue Edouard Belin, 31400 Toulouse, France. 8 3: LEMAR, UMR CNRS 6539, IUEM, Technopole Brest Iroise, Place Nicolas Copernic, 9 29280 Plouzané, France. 10 11 Paper published in Geophysical Research Letters (2008) L24610. 12 We acknowledge Geophysical Research Letters and the American Geophysical Union copyright 13 14 This work demonstrates for the first time the feasibility of the measurement of the isotopic 15 composition of dissolved iron in seawater for a typical open ocean Fe concentration range 16 (0.1-1nM).
    [Show full text]
  • Stable Isotope Analyses Differentiate Between Different Trophic Pathways Supporting Rocky-Reef Fishes
    MARINE ECOLOGY PROGRESS SERIES Vol. 95: 19-24, 1993 Published May 19 Mar. Ecol. Prog. Ser. Stable isotope analyses differentiate between different trophic pathways supporting rocky-reef fishes Carrie J. Thomas, Lawrence B. Cahoon Biological Sciences, University of North Carolina at Wilmington, Wilmington, North Carolina 28403, USA ABSTRACT: Stable isotope analyses of 5 reef-associated fishes, Decapterus punctatus. Diplodus holbrooki, Rhornboplites aurorubens. Pagrus pagrus, and Haernulon aurolineatum, were conducted to determine the ability of stable isotope analysis to distinguish among the species and the trophic pathways that support them. Analyses of F13C, 615~,and 634~from white swimming muscle yielded significant differences between species. Multiple stable isotope signatures of these 5 species indicated that at least 2 trophic pathways, one planktonic and one benthic, supported these reef-associated species. Variability of isotopic signatures within species was largely a result of collection site differ- ences. 8l3C and 615N values inchcated that all fishes were feeding at similar trophic levels. P4S values proved to be useful supplements to carbon and nitrogen isotope values in separating species by signature. INTRODUCTION sandy areas (Hales 1987, Donaldson 1991). Other fishes, such as Diplodus holbrooki (spottail pinfish), Total primary production on the continental shelf off feed upon benthic macroalgae and associated inverte- North Carolina, USA, is supported by 3 sources: phyto- brates (Hay & Sutherland 1988, Pike 1991). Finally, plankton, benthic macroalgae, and benthic micro- demersal zooplankton feed on benthic microalgae algae. Cahoon et al. (1990) found benthic microalgal (Tronzo 1989).Demersal zooplankton are in turn a food biomass frequently equalled or exceeded integrated item for fishes such as Haemulon aurolineatum phytoplankton biomass across the shelf.
    [Show full text]
  • Environmental Correlates to Amphibian and Reptile
    ENVIRONMENTAL CORRELATES TO AMPHIBIAN AND REPTILE DIVERSITY IN COSTA RICA A Thesis by DAVID EDELMAN LAURENCIO Submitted to the Office of Graduate Studies of Texas A&M University in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE May 2007 Major Subject: Wildlife and Fisheries Sciences ENVIRONMENTAL CORRELATES TO AMPHIBIAN AND REPTILE DIVERSITY IN COSTA RICA A Thesis by DAVID EDELMAN LAURENCIO Submitted to the Office of Graduate Studies of Texas A&M University in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE Approved by: Chair of Committee, Lee A. Fitzgerald Committee Members, James R. Dixon Robert A. Wharton Head of Department, Thomas E. Lacher Jr. May 2007 Major Subject: Wildlife and Fisheries Sciences iii ABSTRACT Environmental Correlates to Amphibian and Reptile Diversity in Costa Rica. (May 2007) David Edelman Laurencio, B.S., Texas A&M University Chair of Advisory Committee: Dr. Lee A. Fitzgerald The study of species diversity patterns and their causes remains a central theme of ecology. Work conducted over the last few decades has shown that both historical and ecological factors are important in determining species diversity patterns. Additionally, different causal mechanisms are important at different spatial and temporal scales. At the regional scale, species diversity patterns can best be studied in terms of three diversity components (alpha, beta and gamma). This study used the amphibians and reptiles of Costa Rica to examine these species diversity components at the regional scale. To accomplish this, existing species lists were compiled from the literature. Additionally, three herpetofaunal surveys were conducted at under surveyed sites to fill knowledge gaps.
    [Show full text]
  • Ocean Ecogeochemistry a Review
    Oceanography and Marine Biology: An Annual Review, 2013, 51, 327-374 © Roger N. Hughes, David Hughes, and I. Philip Smith, Editors Taylor & Francis OcEaN EcOgeochemistry: a review KElton w. mcmahon1,2,3, Li Ling HamaDy1 & SImon R. ThorrolD1 1Biology Department, Woods Hole Oceanographic Institution, MS50, Woods Hole, MA 02543, USA E- mail: [email protected] (corresponding author), [email protected] 2Red Sea Research Center, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia E- mail: [email protected] 3Ocean Sciences Department, University of California-Santa Cruz, SantaCruz, CA 95064, USA animal movements and the acquisition and allocation of resources provide mechanisms for indi- vidual behavioural traits to propagate through population, community and ecosystem levels of biological organization. Recent developments in analytical geochemistry have provided ecolo- gists with new opportunities to examine movements and trophic dynamics and their subsequent influence on the structure and functioning of animal communities. we refer to this approach as ecogeochemistry—the application of geochemical techniques to fundamental questions in popula- tion and community ecology. we used meta- analyses of published data to construct δ2H, δ13c, δ15N, δ18O and Δ14c isoscapes throughout the world’s oceans. These maps reveal substantial spatial vari- ability in stable isotope values on regional and ocean- basin scales. we summarize distributions of dissolved metals commonly assayed in the calcified tissues of marine animals. Finally, we review stable isotope analysis (SIa) of amino acids and fatty acids. These analyses overcome many of the problems that prevent bulk SIa from providing sufficient geographic or trophic resolution in marine applications. we expect that ecologists will increasingly use ecogeochemistry approaches to estimate animal movements and trace nutrient pathways in ocean food webs.
    [Show full text]
  • Ocean Primary Production
    Learning Ocean Science through Ocean Exploration Section 6 Ocean Primary Production Photosynthesis very ecosystem requires an input of energy. The Esource varies with the system. In the majority of ocean ecosystems the source of energy is sunlight that drives photosynthesis done by micro- (phytoplankton) or macro- (seaweeds) algae, green plants, or photosynthetic blue-green or purple bacteria. These organisms produce ecosystem food that supports the food chain, hence they are referred to as primary producers. The balanced equation for photosynthesis that is correct, but seldom used, is 6CO2 + 12H2O = C6H12O6 + 6H2O + 6O2. Water appears on both sides of the equation because the water molecule is split, and new water molecules are made in the process. When the correct equation for photosynthe- sis is used, it is easier to see the similarities with chemo- synthesis in which water is also a product. Systems Lacking There are some ecosystems that depend on primary Primary Producers production from other ecosystems. Many streams have few primary producers and are dependent on the leaves from surrounding forests as a source of food that supports the stream food chain. Snow fields in the high mountains and sand dunes in the desert depend on food blown in from areas that support primary production. The oceans below the photic zone are a vast space, largely dependent on food from photosynthetic primary producers living in the sunlit waters above. Food sinks to the bottom in the form of dead organisms and bacteria. It is as small as marine snow—tiny clumps of bacteria and decomposing microalgae—and as large as an occasional bonanza—a dead whale.
    [Show full text]
  • Online Resources for Stable Isotope Laboratory Education and Training and Ecological Applications
    Online Resources for Stable Isotope Laboratory Education and Training and Ecological Applications Lisandra Trine, J. Renée Brooks, and William Rugh Ecological Effects Branch Pacific Ecological Systems Division Corvallis, OR, 97330 Introduction EPA’s Integrated Stable Isotope Research Facility developed a table of online educational and training resources for stable isotope analysis methods and ecological applications. This table was compiled from broad input from the stable isotope geochemistry community on the ISOGEOCHEM list serve. This resource material provides continued training of EPA and other staff in the greater stable isotope research group during situations when they may not have access to the laboratories. For any comments or recommendations to incorporate into this general listing, email [email protected]. Notice/Disclaimer Statement The views expressed in this document are those of the author(s) and do not necessarily represent the views or policies of the U.S. Environmental Protection Agency. Any mention of trade names, products, or services does not imply an endorsement by the U.S. Government or the U.S. Environmental Protection Agency. The EPA does not endorse any commercial products, services, or enterprises. This document provides links to non-EPA web sites that provide additional information about this topic. EPA cannot attest to the accuracy of information on that non-EPA page. Copywrite laws must be considered for all material in these links. Providing links to a non- EPA Web site is not an endorsement of the other site or the information it contains by EPA or any of its employees. Also, be aware that the privacy protection provided on the EPA.gov domain (see Privacy and Security Notice) may not be available at the external link.
    [Show full text]