Inhibition of the G9a/GLP Histone Methyltransferase Complex Modulates Anxiety-Related Behavior in Mice
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Epigenetic Regulation of the PTEN–AKT–RAC1 Axis by G9a Is Critical for Tumor Growth in Alveolar Rhabdomyosarcoma Akshay V
Published OnlineFirst March 4, 2019; DOI: 10.1158/0008-5472.CAN-18-2676 Cancer Molecular Cell Biology Research Epigenetic Regulation of the PTEN–AKT–RAC1 Axis by G9a Is Critical for Tumor Growth in Alveolar Rhabdomyosarcoma Akshay V. Bhat1, Monica Palanichamy Kala1, Vinay Kumar Rao1, Luca Pignata2, Huey Jin Lim3, Sudha Suriyamurthy1, Kenneth T.Chang4,Victor K. Lee3, Ernesto Guccione2, and Reshma Taneja1 Abstract Alveolar rhabdomyosarcoma (ARMS) is an aggressive suppressor PTEN was a direct target gene of G9a. G9a pediatric cancer with poor prognosis. As transient and stable repressed PTEN expression in a methyltransferase activity– modifications to chromatin have emerged as critical dependent manner, resulting in increased AKT and RAC1 mechanisms in oncogenic signaling, efforts to target epige- activity. Re-expression of constitutively active RAC1 in G9a- netic modifiers as a therapeutic strategy have accelerated in deficient tumor cells restored oncogenic phenotypes, demon- recent years. To identify chromatin modifiers that sustain strating its critical functions downstream of G9a. Collectively, tumor growth, we performed an epigenetic screen and our study provides evidence for a G9a-dependent epigenetic found that inhibition of lysine methyltransferase G9a sig- program that regulates tumor growth and suggests targeting nificantly affected the viability of ARMS cell lines. Targeting G9a as a therapeutic strategy in ARMS. expression or activity of G9a reduced cellular proliferation and motility in vitro and tumor growth in vivo.Transcrip- Significance: These findings demonstrate that RAC1 is an tome and chromatin immunoprecipitation–sequencing effector of G9a oncogenic functions and highlight the poten- analysis provided mechanistic evidence that the tumor- tial of G9a inhibitors in the treatment of ARMS. -
Overexpression of the Histone Dimethyltransferase G9a in Nucleus Accumbens Shell Increases Cocaine Self- Administration, Stress-Induced Reinstatement, and Anxiety
The Journal of Neuroscience, January 24, 2018 • 38(4):803–813 • 803 Neurobiology of Disease Overexpression of the Histone Dimethyltransferase G9a in Nucleus Accumbens Shell Increases Cocaine Self- Administration, Stress-Induced Reinstatement, and Anxiety X Ethan M. Anderson,1 Erin B. Larson,1 XDaniel Guzman,1 Anne Marie Wissman,1 Rachael L. Neve,2 XEric J. Nestler,3 and X David W. Self1 1Department of Psychiatry, The Seay Center for Basic and Applied Research in Psychiatric Illness, University of Texas Southwestern Medical Center, Dallas, Texas, 75390, 2Viral Gene Transfer Core, Department of Brain and Cognitive Sciences, McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, and 3Icahn School of Medicine at Mount Sinai, Department of Neuroscience, New York, New York 10029 Repeated exposure to cocaine induces lasting epigenetic changes in neurons that promote the development and persistence of addiction. One epigenetic alteration involves reductions in levels of the histone dimethyltransferase G9a in nucleus accumbens (NAc) after chronic cocaine administration. This reduction in G9a may enhance cocaine reward because overexpressing G9a in the NAc decreases cocaine- conditioned place preference. Therefore, we hypothesized that HSV-mediated G9a overexpression in the NAc shell (NAcSh) would attenuate cocaine self-administration (SA) and cocaine-seeking behavior. Instead, we found that G9a overexpression, and the resulting increase in histone 3 lysine 9 dimethylation (H3K9me2), increases sensitivity to cocaine reinforcement and enhances motivation for cocaine in self-administering male rats. Moreover, when G9a overexpression is limited to the initial 15 d of cocaine SA training, it produces an enduring postexpression enhancement in cocaine SA and prolonged (over 5 weeks) increases in reinstatement of cocaine seeking induced by foot-shock stress, but in the absence of continued global elevations in H3K9me2. -
A Computational Approach for Defining a Signature of Β-Cell Golgi Stress in Diabetes Mellitus
Page 1 of 781 Diabetes A Computational Approach for Defining a Signature of β-Cell Golgi Stress in Diabetes Mellitus Robert N. Bone1,6,7, Olufunmilola Oyebamiji2, Sayali Talware2, Sharmila Selvaraj2, Preethi Krishnan3,6, Farooq Syed1,6,7, Huanmei Wu2, Carmella Evans-Molina 1,3,4,5,6,7,8* Departments of 1Pediatrics, 3Medicine, 4Anatomy, Cell Biology & Physiology, 5Biochemistry & Molecular Biology, the 6Center for Diabetes & Metabolic Diseases, and the 7Herman B. Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, IN 46202; 2Department of BioHealth Informatics, Indiana University-Purdue University Indianapolis, Indianapolis, IN, 46202; 8Roudebush VA Medical Center, Indianapolis, IN 46202. *Corresponding Author(s): Carmella Evans-Molina, MD, PhD ([email protected]) Indiana University School of Medicine, 635 Barnhill Drive, MS 2031A, Indianapolis, IN 46202, Telephone: (317) 274-4145, Fax (317) 274-4107 Running Title: Golgi Stress Response in Diabetes Word Count: 4358 Number of Figures: 6 Keywords: Golgi apparatus stress, Islets, β cell, Type 1 diabetes, Type 2 diabetes 1 Diabetes Publish Ahead of Print, published online August 20, 2020 Diabetes Page 2 of 781 ABSTRACT The Golgi apparatus (GA) is an important site of insulin processing and granule maturation, but whether GA organelle dysfunction and GA stress are present in the diabetic β-cell has not been tested. We utilized an informatics-based approach to develop a transcriptional signature of β-cell GA stress using existing RNA sequencing and microarray datasets generated using human islets from donors with diabetes and islets where type 1(T1D) and type 2 diabetes (T2D) had been modeled ex vivo. To narrow our results to GA-specific genes, we applied a filter set of 1,030 genes accepted as GA associated. -
Original Article Preprogramming Therapeutic Response of PI3K/Mtor Dual Inhibitor Via the Regulation of EHMT2 and P27 in Pancreatic Cancer
Am J Cancer Res 2018;8(9):1812-1822 www.ajcr.us /ISSN:2156-6976/ajcr0082503 Original Article Preprogramming therapeutic response of PI3K/mTOR dual inhibitor via the regulation of EHMT2 and p27 in pancreatic cancer Yu-Feng Tian1,2, Hui-Ching Wang3,4, Chi-Wen Luo5, Wen-Chun Hung6, Yu-Han Lin3, Tzu-Yi Chen3, Chien-Feng Li7,8,9, Chen-Yi Lin10, Mei-Ren Pan3 1Division of Colorectal Surgery, Department of Surgery, Chi-Mei Medical Center, Tainan, Taiwan; 2Department of Health and Nutrition, Chia Nan University of Pharmacy and Science, Tainan, Taiwan; 3Graduate Institute of Clinical Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung, Taiwan; 4Division of Hematology and Oncology, Department of Internal Medicine, Kaohsiung Medical University Hospital, Kaohsiung Medical University, Kaohsiung, Taiwan; 5Division of Cardiology, Chang Gung Memorial Hospital-Kaohsiung Medical Center, Kaohsiung, Taiwan; 6National Institute of Cancer Research, National Health Research Institutes, Tainan 704, Taiwan; 7De- partment of Pathology, Chi Mei Medical Center, Tainan, Taiwan; 8National Institute of Cancer Research, National Health Research Institutes, Tainan, Taiwan; 9Department of Biotechnology, Southern Taiwan University of Science and Technology, Tainan, Taiwan; 10Division of Gastroenterology and Hepatology, Department of Internal Medicine, Chi-Mei Medical Center, Tainan, Taiwan Received July 12, 2018; Accepted August 14, 2018; Epub September 1, 2018; Published September 15, 2018 Abstract: Pancreatic ductal adenocarcinoma (PDAC) is an aggressive disease, which is characterized by its high in- vasiveness, rapid progression, and profound resistance to therapy. Gemcitabine is the first-line treatment option for pancreatic cancer patients, but the overall survival is quite low. Therefore, it is an urgent issue to identify new mol- ecules for improved therapies, with better efficacy and less toxicity. -
Enhancer Priming by H3K4 Methylation Safeguards Germline Competence
bioRxiv preprint doi: https://doi.org/10.1101/2020.07.07.192427; this version posted July 7, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Title: Enhancer priming by H3K4 methylation safeguards germline competence 1* 1 1,2 Authors: Tore Bleckwehl , Kaitlin Schaaf , Giuliano Crispatzu , Patricia 1,3 1,4 5 5 Respuela , Michaela Bartusel , Laura Benson , Stephen J. Clark , Kristel M. 6 7 1,8 7,9 Dorighi , Antonio Barral , Magdalena Laugsch , Miguel Manzanares , Joanna 6,10,11 5,12,13 1,3,14* Wysocka , Wolf Reik , Álvaro Rada-Iglesias Affiliations: 1 Center for Molecular Medicine Cologne (CMMC), University of Cologne, Germany. 2 Department of Internal Medicine 2, University Hospital Cologne. 3 Institute of Biomedicine and Biotechnology of Cantabria (IBBTEC), CSIC/University of Cantabria, Spain. 4 Department of Biology, Massachusetts Institute of Technology, USA. 5 Epigenetics Programme, Babraham Institute, Cambridge CB22 3AT, UK. 6 Department of Chemical and Systems Biology, Stanford University School of Medicine, USA. 7 Centro Nacional de Investigaciones Cardiovasculares (CNIC), Spain. 8 Institute of Human Genetics, Heidelberg University Hospital, Germany. 9 Centro de Biología Molecular Severo Ochoa (CBMSO), CSIC-UAM, Spain. 10 Department of Developmental Biology, Stanford University School of Medicine, USA. 11 Howard Hughes Medical Institute, Stanford University School of Medicine, USA. 12 Centre for Trophoblast Research, University of Cambridge, CB2 3EG, UK 13 Wellcome Trust Sanger Institute, Cambridge CB10 1SA, UK. -
Development and Validation of a Protein-Based Risk Score for Cardiovascular Outcomes Among Patients with Stable Coronary Heart Disease
Supplementary Online Content Ganz P, Heidecker B, Hveem K, et al. Development and validation of a protein-based risk score for cardiovascular outcomes among patients with stable coronary heart disease. JAMA. doi: 10.1001/jama.2016.5951 eTable 1. List of 1130 Proteins Measured by Somalogic’s Modified Aptamer-Based Proteomic Assay eTable 2. Coefficients for Weibull Recalibration Model Applied to 9-Protein Model eFigure 1. Median Protein Levels in Derivation and Validation Cohort eTable 3. Coefficients for the Recalibration Model Applied to Refit Framingham eFigure 2. Calibration Plots for the Refit Framingham Model eTable 4. List of 200 Proteins Associated With the Risk of MI, Stroke, Heart Failure, and Death eFigure 3. Hazard Ratios of Lasso Selected Proteins for Primary End Point of MI, Stroke, Heart Failure, and Death eFigure 4. 9-Protein Prognostic Model Hazard Ratios Adjusted for Framingham Variables eFigure 5. 9-Protein Risk Scores by Event Type This supplementary material has been provided by the authors to give readers additional information about their work. Downloaded From: https://jamanetwork.com/ on 10/02/2021 Supplemental Material Table of Contents 1 Study Design and Data Processing ......................................................................................................... 3 2 Table of 1130 Proteins Measured .......................................................................................................... 4 3 Variable Selection and Statistical Modeling ........................................................................................ -
Evidence for Non-Genetic Factors in C57BL/6 Mice Jennifer T
Virginia Commonwealth University VCU Scholars Compass Pharmacology and Toxicology Publications Dept. of Pharmacology and Toxicology 2011 Genomic Analysis of Individual Differences in Ethanol Drinking: Evidence for Non-Genetic Factors in C57BL/6 Mice Jennifer T. Wolstenholme Virginia Commonwealth University, [email protected] Jon A. Warner Virginia Commonwealth University Maria I. Capparuccini Virginia Commonwealth University, [email protected] See next page for additional authors Follow this and additional works at: http://scholarscompass.vcu.edu/phtx_pubs Part of the Medical Pharmacology Commons © 2011 Wolstenholme et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Downloaded from http://scholarscompass.vcu.edu/phtx_pubs/9 This Article is brought to you for free and open access by the Dept. of Pharmacology and Toxicology at VCU Scholars Compass. It has been accepted for inclusion in Pharmacology and Toxicology Publications by an authorized administrator of VCU Scholars Compass. For more information, please contact [email protected]. Authors Jennifer T. Wolstenholme, Jon A. Warner, Maria I. Capparuccini, Kellie J. Archer, Keith L. Shelton, and Michael F. Miles This article is available at VCU Scholars Compass: http://scholarscompass.vcu.edu/phtx_pubs/9 Genomic Analysis of Individual Differences in Ethanol Drinking: Evidence for Non-Genetic Factors -
Dimethylation of Histone 3 Lysine 9 Is Sensitive to the Epileptic Activity
1368 MOLECULAR MEDICINE REPORTS 17: 1368-1374, 2018 Dimethylation of Histone 3 Lysine 9 is sensitive to the epileptic activity, and affects the transcriptional regulation of the potassium channel Kcnj10 gene in epileptic rats SHAO-PING ZHANG1,2*, MAN ZHANG1*, HONG TAO1, YAN LUO1, TAO HE3, CHUN-HUI WANG3, XIAO-CHENG LI3, LING CHEN1,3, LIN-NA ZHANG1, TAO SUN2 and QI-KUAN HU1-3 1Department of Physiology; 2Ningxia Key Laboratory of Cerebrocranial Diseases, Incubation Base of National Key Laboratory, Ningxia Medical University; 3General Hospital of Ningxia Medical University, Yinchuan, Ningxia 750004, P.R. China Received February 18, 2017; Accepted September 13, 2017 DOI: 10.3892/mmr.2017.7942 Abstract. Potassium channels can be affected by epileptic G9a by 2-(Hexahydro-4-methyl-1H-1,4-diazepin-1-yl)-6,7-di- seizures and serve a crucial role in the pathophysiology of methoxy-N-(1-(phenyl-methyl)-4-piperidinyl)-4-quinazolinamine epilepsy. Dimethylation of histone 3 lysine 9 (H3K9me2) and tri-hydrochloride hydrate (bix01294) resulted in upregulation its enzyme euchromatic histone-lysine N-methyltransferase 2 of the expression of Kir4.1 proteins. The present study demon- (G9a) are the major epigenetic modulators and are associated strated that H3K9me2 and G9a are sensitive to epileptic seizure with gene silencing. Insight into whether H3K9me2 and G9a activity during the acute phase of epilepsy and can affect the can respond to epileptic seizures and regulate expression of transcriptional regulation of the Kcnj10 channel. genes encoding potassium channels is the main purpose of the present study. A total of 16 subtypes of potassium channel Introduction genes in pilocarpine-modelled epileptic rats were screened by reverse transcription-quantitative polymerase chain reac- Epilepsies are disorders of neuronal excitability, characterized tion, and it was determined that the expression ATP-sensitive by spontaneous and recurrent seizures. -
Locus-Specific Epigenetic Remodeling Controls Addiction- and Depression-Related Behaviors
Locus-specific epigenetic remodeling controls addiction- and depression-related behaviors The MIT Faculty has made this article openly available. Please share how this access benefits you. Your story matters. Citation Heller, Elizabeth A, Hannah M Cates, Catherine J Pena, Haosheng Sun, Ningyi Shao, Jian Feng, Sam A Golden, et al. “Locus-Specific Epigenetic Remodeling Controls Addiction- and Depression-Related Behaviors.” Nature Neuroscience 17, no. 12 (October 27, 2014): 1720–27. As Published http://dx.doi.org/10.1038/nn.3871 Publisher Nature Publishing Group Version Author's final manuscript Citable link http://hdl.handle.net/1721.1/102587 Terms of Use Creative Commons Attribution-Noncommercial-Share Alike Detailed Terms http://creativecommons.org/licenses/by-nc-sa/4.0/ NIH Public Access Author Manuscript Nat Neurosci. Author manuscript; available in PMC 2015 June 01. NIH-PA Author ManuscriptPublished NIH-PA Author Manuscript in final edited NIH-PA Author Manuscript form as: Nat Neurosci. 2014 December ; 17(12): 1720–1727. doi:10.1038/nn.3871. Locus-Specific Epigenetic Remodeling Controls Addiction- and Depression-Related Behaviors (NN-A50213-T) Elizabeth A. Heller, Fishberg Department of Neuroscience and Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA. Hannah M. Cates, Fishberg Department of Neuroscience and Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA. Catherine J. Peña, Fishberg Department of Neuroscience and Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA. Haosheng Sun, Fishberg Department of Neuroscience and Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA. -
Longitudinal Genome-Wide Methylation Study of Roux-En-Y Gastric Bypass Patients Reveals Novel Cpg Sites Associated with Essential Hypertension Adrian E
Boström et al. BMC Medical Genomics (2016) 9:20 DOI 10.1186/s12920-016-0180-y RESEARCH ARTICLE Open Access Longitudinal genome-wide methylation study of Roux-en-Y gastric bypass patients reveals novel CpG sites associated with essential hypertension Adrian E. Boström1*, Jessica Mwinyi1, Sarah Voisin1, Wenting Wu2, Bernd Schultes3, Kang Zhang2 and Helgi B. Schiöth1 Abstract Background: Essential hypertension is a significant risk factor for cardiovascular diseases. Emerging research suggests a role of DNA methylation in blood pressure physiology. We aimed to investigate epigenetic associations of promoter related CpG sites to essential hypertension in a genome-wide methylation approach. Methods: The genome-wide methylation pattern in whole blood was measured in 11 obese patients before and six months after Roux-en-Y gastric bypass surgery using the Illumina 450 k beadchip. CpG sites located within 1500 bp of the transcriptional start site of adjacent genes were included in our study, resulting in 124 199 probes investigated in the subsequent analysis. Percent changes in methylation states and SBP measured before and six months after surgery were calculated. These parameters were correlated to each other using the Spearman’s rank correlation method (Edgeworth series approximation). To further investigate the detected relationship between candidate CpG sites and systolic blood pressure levels, binary logistic regression analyses were performed in a larger and independent cohort of 539 individuals aged 19–101 years to elucidate a relationship between EH and the methylation state in candidate CpG sites. Results: We identified 24 promoter associated CpG sites that correlated with change in SBP after RYGB surgery (p <10−16). -
A Validation of Illumina EPIC Array System with Bisulfite-Based Amplicon Sequencing
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.25.115428; this version posted May 28, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. A validation of Illumina EPIC array system with bisulfite-based amplicon sequencing Alexandra Noble1, John Pearson2, Joseph Boden3, John Horwood3, Neil Gemmell4, Martin Kennedy2, Amy Osborne1 1Biological Sciences, University of Canterbury, Christchurch, New Zealand 2Department of Pathology and Biomedical Sciences, University of Otago, Christchurch, New Zealand 3Department of Psychological Medicine, University of Otago, Christchurch, New Zealand 4Department of Anatomy, University of Otago, Dunedin, New Zealand bioRxiv preprint doi: https://doi.org/10.1101/2020.05.25.115428; this version posted May 28, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Abstract The Illumina Infinium® MethylationEPIC BeadChip system (hereafter EPIC array) is considered to be the current gold standard detection method for assessing DNA methylation at the genome-wide level. EPIC arrays are used for hypothesis generation or pilot studies, the natural conclusion is to validate methylation candidates and expand these in a larger cohort, in a targeted manner. As such, an accurate smaller-scale, targeted technique, that generates data at the individual CpG level that is equivalent to the EPIC array, is needed. -
Identification and Characterization of Posttranslational Modification-Specific Binding Proteins in Vivo by Mammalian Tethered Catalysis
Identification and characterization of posttranslational modification-specific binding proteins in vivo by mammalian tethered catalysis Tanya M. Spektor and Judd C. Rice1 Department of Biochemistry and Molecular Biology, University of Southern California Keck School of Medicine, Los Angeles, CA 90033 Communicated by C. David Allis, The Rockefeller University, New York, NY, July 14, 2009 (received for review February 26, 2009) Increasing evidence indicates that an important consequence of To overcome some of the limitations of in vitro approaches, a protein posttranslational modification (PTM) is the creation of a high previously undescribed in vivo method called yeast tethered catal- affinity binding site for the selective interaction with a PTM-specific ysis was developed (1). Briefly, an expressed fusion protein con- binding protein (BP). This PTM-mediated interaction is typically re- taining a target peptide sequence was tethered to an enzyme quired for downstream signaling propagation and corresponding resulting in the constitutive PTM of the peptide and, thereby, biological responses. Because the vast majority of mammalian pro- served as the bait in yeast two-hybrid screens for putative PTMBPs. teins contain PTMs, there is an immediate need to discover and Although this technique was used successfully to identify yeast characterize previously undescribed PTMBPs. To this end, we devel- PTMBPs, the ability to detect PTMBPs in higher eukaryotes is oped and validated an innovative in vivo approach called mammalian constrained by the limitations