Bathurst Campus (The Study Area) Supports at Least 189 Species of Flora, of Which 83 (43.9%) Are Native and 106 (56.1%) Are Introduced
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Resolution of Deep Angiosperm Phylogeny Using Conserved Nuclear Genes and Estimates of Early Divergence Times
ARTICLE Received 24 Mar 2014 | Accepted 11 Aug 2014 | Published 24 Sep 2014 DOI: 10.1038/ncomms5956 OPEN Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of early divergence times Liping Zeng1, Qiang Zhang2, Renran Sun1, Hongzhi Kong3, Ning Zhang1,4 & Hong Ma1,5 Angiosperms are the most successful plants and support human livelihood and ecosystems. Angiosperm phylogeny is the foundation of studies of gene function and phenotypic evolution, divergence time estimation and biogeography. The relationship of the five divergent groups of the Mesangiospermae (B99.95% of extant angiosperms) remains uncertain, with multiple hypotheses reported in the literature. Here transcriptome data sets are obtained from 26 species lacking sequenced genomes, representing each of the five groups: eudicots, monocots, magnoliids, Chloranthaceae and Ceratophyllaceae. Phylogenetic analyses using 59 carefully selected low-copy nuclear genes resulted in highly supported relationships: sisterhood of eudicots and a clade containing Chloranthaceae and Ceratophyllaceae, with magnoliids being the next sister group, followed by monocots. Our topology allows a re-examination of the evolutionary patterns of 110 morphological characters. The molecular clock estimates of Mesangiospermae diversification during the late to middle Jurassic correspond well to the origins of some insects, which may have been a factor facilitating early angiosperm radiation. 1 State Key Laboratory of Genetic Engineering and Collaborative Innovation Center for Genetics and Development, Ministry of Education Key Laboratoryof Biodiversity Sciences and Ecological Engineering, Institute of Plant Biology, Institute of Biodiversity Science, Center for Evolutionary Biology, School of Life Sciences, Fudan University, 220 Handan Road, Yangpu District, Shanghai 200433, China. 2 Guangxi Institute of Botany, Guangxi Zhuang Autonomous Region and the Chinese Academy of Sciences, Guilin 541006, China. -
To Name Those Lost: Assessing Extinction Likelihood in the Australian Vascular Flora J.L
To name those lost: assessing extinction likelihood in the Australian vascular flora J.L. SILCOCK, A.R. FIELD, N.G. WALSH and R.J. FENSHAM SUPPLEMENTARY TABLE 1 Presumed extinct plant taxa in Australia that are considered taxonomically suspect, or whose occurrence in Australia is considered dubious. These require clarification, and their extinction likelihood is not assessed here. Taxa are sorted alphabetically by family, then species. No. of Species EPBC1 Last collections References and/or pers. (Family) (State)2 Notes on taxonomy or occurrence State Bioregion/s collected (populations) comms Trianthema cypseleoides Sydney (Aizoaceae) X (X) Known only from type collection; taxonomy needs to be resolved prior to targeted surveys being conducted NSW Basin 1839 1 (1) Steve Douglas Frankenia decurrens (Frankeniaceae) X (X) Very close to F.cinerea and F.brachyphylla; requires taxonomic work to determine if it is a good taxon WA Warren 1850 1 (1) Robinson & Coates (1995) Didymoglossum exiguum Also occurs in India, Sri Lanka, Thailand, Malay Peninsula; known only from type collection in Australia by Domin; specimen exists, but Field & Renner (2019); Ashley (Hymenophyllaceae) X (X) can't rule out the possibility that Domin mislabelled some of these ferns from Bellenden Ker as they have never been found again. QLD Wet Tropics 1909 1 (1) Field Hymenophyllum lobbii Domin specimen in Prague; widespread in other countries; was apparently common and good precision record, so should have been Field & Renner (2019); Ashley (Hymenophyllaceae) X (X) refound by now if present QLD Wet Tropics 1909 1 (1) Field Avon Wheatbelt; Esperance Known from four collections between 1844 and 1892; in her unpublished conspectus of Hemigenia, Barbara Rye included H. -
Specified Protected Matters Impact Profiles (Including Risk Assessment)
Appendix F Specified Protected Matters impact profiles (including risk assessment) Roads and Maritime Services EPBC Act Strategic Assessment – Strategic Assessment Report 1. FA1 - Wetland-dependent fauna Species included (common name, scientific name) Listing SPRAT ID Australasian Bittern (Botaurus poiciloptilus) Endangered 1001 Oxleyan Pygmy Perch (Nannoperca oxleyana) Endangered 64468 Blue Mountains Water Skink (Eulamprus leuraensis) Endangered 59199 Yellow-spotted Tree Frog/Yellow-spotted Bell Frog (Litoria castanea) Endangered 1848 Giant Burrowing Frog (Heleioporus australicus) Vulnerable 1973 Booroolong Frog (Litoria booroolongensis) Endangered 1844 Littlejohns Tree Frog (Litoria littlejohni) Vulnerable 64733 1.1 Wetland-dependent fauna description Item Summary Description Found in the waters, riparian vegetation and associated wetland vegetation of a diversity of freshwater wetland habitats. B. poiciloptilus is a large, stocky, thick-necked heron-like bird with camouflage-like plumage growing up to 66-76 cm with a wingspan of 1050-1180 cm and feeds on freshwater crustacean, fish, insects, snakes, leaves and fruit. N. oxleyana is light brown to olive coloured freshwater fish with mottling and three to four patchy, dark brown bars extending from head to tail and a whitish belly growing up to 35-60 mm. This is a mobile species that is often observed individually or in pairs and sometimes in small groups but does not form schools and feed on aquatic insects and their larvae (Allen, 1989; McDowall, 1996). E. leuraensis is an insectivorous, medium-sized lizard growing to approximately 20 cm in length. This species has a relatively dark brown/black body when compared to other Eulamprus spp. Also has narrow yellow/bronze to white stripes along its length to beginning of the tail and continuing along the tail as a series of spots (LeBreton, 1996; Cogger, 2000). -
Highly Variable Chloroplast Markers for Evaluating Plant Phylogeny at Low Taxonomic Levels and for DNA Barcoding
Highly Variable Chloroplast Markers for Evaluating Plant Phylogeny at Low Taxonomic Levels and for DNA Barcoding Wenpan Dong1,2, Jing Liu1,3,JingYu1,3, Ling Wang2, Shiliang Zhou1* 1 State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing, China, 2 College of Landscape Architecture, Northeast Forestry University, Harbin, China, 3 Graduate University of Chinese Academy of Sciences, Beijing, China Abstract Background: At present, plant molecular systematics and DNA barcoding techniques rely heavily on the use of chloroplast gene sequences. Because of the relatively low evolutionary rates of chloroplast genes, there are very few choices suitable for molecular studies on angiosperms at low taxonomic levels, and for DNA barcoding of species. Methodology/Principal Findings: We scanned the entire chloroplast genomes of 12 genera to search for highly variable regions. The sequence data of 9 genera were from GenBank and 3 genera were of our own. We identified nearly 5% of the most variable loci from all variable loci in the chloroplast genomes of each genus, and then selected 23 loci that were present in at least three genera. The 23 loci included 4 coding regions, 2 introns, and 17 intergenic spacers. Of the 23 loci, the most variable (in order from highest variability to lowest) were intergenic regions ycf1-a, trnK, rpl32-trnL, and trnH-psbA, followed by trnSUGA-trnGUCC, petA-psbJ, rps16-trnQ, ndhC-trnV, ycf1-b, ndhF, rpoB-trnC, psbE-petL, and rbcL-accD. Three loci, trnSUGA-trnGUCC, trnT-psbD, and trnW-psaJ, showed very high nucleotide diversity per site (p values) across three genera. -
Trees, Shrubs, and Perennials That Intrigue Me (Gymnosperms First
Big-picture, evolutionary view of trees and shrubs (and a few of my favorite herbaceous perennials), ver. 2007-11-04 Descriptions of the trees and shrubs taken (stolen!!!) from online sources, from my own observations in and around Greenwood Lake, NY, and from these books: • Dirr’s Hardy Trees and Shrubs, Michael A. Dirr, Timber Press, © 1997 • Trees of North America (Golden field guide), C. Frank Brockman, St. Martin’s Press, © 2001 • Smithsonian Handbooks, Trees, Allen J. Coombes, Dorling Kindersley, © 2002 • Native Trees for North American Landscapes, Guy Sternberg with Jim Wilson, Timber Press, © 2004 • Complete Trees, Shrubs, and Hedges, Jacqueline Hériteau, © 2006 They are generally listed from most ancient to most recently evolved. (I’m not sure if this is true for the rosids and asterids, starting on page 30. I just listed them in the same order as Angiosperm Phylogeny Group II.) This document started out as my personal landscaping plan and morphed into something almost unwieldy and phantasmagorical. Key to symbols and colored text: Checkboxes indicate species and/or cultivars that I want. Checkmarks indicate those that I have (or that one of my neighbors has). Text in blue indicates shrub or hedge. (Unfinished task – there is no text in blue other than this text right here.) Text in red indicates that the species or cultivar is undesirable: • Out of range climatically (either wrong zone, or won’t do well because of differences in moisture or seasons, even though it is in the “right” zone). • Will grow too tall or wide and simply won’t fit well on my property. -
Australian Plants Suitable for Tamworth Regional Council Areas
Australian Plants Suitable for Tamworth Regional Council Areas Eucalyptus blakelyi Photo Tony Croft Tamworth Group of Australian Plants Society As at July 2007 Eucalyptus blakelyi II TAMWORTH REGIONAL COUNCIL RAINFALL DATA Most of the Tamworth Regional Council area receives an average annual rainfall of 600 to 800mm except for the north- west corner on the Mount Kaputar plateau and the tablelands country from Bendemeer through Woolbrook to Hanging Rock above Nundle which often receives between 800 to 1000mm. Similarly temperatures vary across the region with average annual minimums on the tablelands and nearby areas between 6 and 9 degrees Celsius. A series of frosts are received across the entire region each winter. Average annual maximums are between 18 and 21 degrees on the tablelands, 21 to 24 degrees across most of the region and 24 to 27 degrees in the west of the region. 1. Barraba 2. Manilla 250 180 160 200 140 120 150 2004/2005 100 2004-2005 80 100 Average Average 60 50 40 20 0 0 il il ec Jan eb ay ec Jan eb ay July Aug Sept Oct Nov D F Apr M June July Aug Sept Oct Nov D F Apr M June March March 3. Nundle 4.Tamworth 250 200 250 200 m 150 2004-2005 2003-2004 150 2003-2004 Average 100 100 2004-2005 m in Rainfall 50 50 0 y t l e 0 ct an h J rc Jul gust Sep O Nov Dec Feb Apri May Jun n b y Ma uly Oct e rch pril une Au J Aug Sept Nov Dec Ja F a A Ma J M Recent and Average Rainfall for Barraba, Manilla, Nundle, Tamworth and Woolbrook Location Rainfall Rainfall Average 2004-2005 2003-2004 Rainfall in mm in mm in mm Barraba 780.9 689 Manilla 627.9 498.1 651.4 Not Nundle 793.7 868 Available Tamworth 629.6 759.2 673 Woolbrook 686.8 784.5 783 More detailed weather information can be found on the Bureau of Meteorology website. -
Checklist of the Vascular Plants of San Diego County 5Th Edition
cHeckliSt of tHe vaScUlaR PlaNtS of SaN DieGo coUNty 5th edition Pinus torreyana subsp. torreyana Downingia concolor var. brevior Thermopsis californica var. semota Pogogyne abramsii Hulsea californica Cylindropuntia fosbergii Dudleya brevifolia Chorizanthe orcuttiana Astragalus deanei by Jon P. Rebman and Michael G. Simpson San Diego Natural History Museum and San Diego State University examples of checklist taxa: SPecieS SPecieS iNfRaSPecieS iNfRaSPecieS NaMe aUtHoR RaNk & NaMe aUtHoR Eriodictyon trichocalyx A. Heller var. lanatum (Brand) Jepson {SD 135251} [E. t. subsp. l. (Brand) Munz] Hairy yerba Santa SyNoNyM SyMBol foR NoN-NATIVE, NATURaliZeD PlaNt *Erodium cicutarium (L.) Aiton {SD 122398} red-Stem Filaree/StorkSbill HeRBaRiUM SPeciMeN coMMoN DocUMeNTATION NaMe SyMBol foR PlaNt Not liSteD iN THE JEPSON MANUAL †Rhus aromatica Aiton var. simplicifolia (Greene) Conquist {SD 118139} Single-leaF SkunkbruSH SyMBol foR StRict eNDeMic TO SaN DieGo coUNty §§Dudleya brevifolia (Moran) Moran {SD 130030} SHort-leaF dudleya [D. blochmaniae (Eastw.) Moran subsp. brevifolia Moran] 1B.1 S1.1 G2t1 ce SyMBol foR NeaR eNDeMic TO SaN DieGo coUNty §Nolina interrata Gentry {SD 79876} deHeSa nolina 1B.1 S2 G2 ce eNviRoNMeNTAL liStiNG SyMBol foR MiSiDeNtifieD PlaNt, Not occURRiNG iN coUNty (Note: this symbol used in appendix 1 only.) ?Cirsium brevistylum Cronq. indian tHiStle i checklist of the vascular plants of san Diego county 5th edition by Jon p. rebman and Michael g. simpson san Diego natural history Museum and san Diego state university publication of: san Diego natural history Museum san Diego, california ii Copyright © 2014 by Jon P. Rebman and Michael G. Simpson Fifth edition 2014. isBn 0-918969-08-5 Copyright © 2006 by Jon P. -
Ecology of Sydney Plant Species Part 8
Benson & McDougall, Ecology of Sydney plant species 8 241 Ecology of Sydney plant species Part 8 Dicotyledon families Rutaceae to Zygophyllaceae Doug Benson and Lyn McDougall Benson, Doug and McDougall, Lyn (National Herbarium of New South Wales, Royal Botanic Gardens, Sydney, Australia 2001. Email: [email protected]) 2001 Ecology of Sydney plant species: Part 8 Dicotyledon families Rutaceae to Zygophyllaceae. Cunninghamia 7(2) 241–462. Ecological data in tabular form are provided on 325 plant species of the families Rutaceae to Zygophyllaceae, 236 native and 89 exotics, occurring in the Sydney region, defined by the Central Coast and Central Tablelands botanical subdivisions of New South Wales (approximately bounded by Lake Macquarie, Orange, Crookwell and Nowra). Relevant Local Government Areas are Auburn, Ashfield, Bankstown, Bathurst, Baulkham Hills, Blacktown, Blayney, Blue Mountains, Botany, Burwood, Cabonne, Camden, Campbelltown, Canterbury, Cessnock, Concord, Crookwell, Drummoyne, Evans, Fairfield, Greater Lithgow, Gosford, Hawkesbury, Holroyd, Hornsby, Hunters Hill, Hurstville, Kiama, Kogarah, Ku-Ring-Gai, Lake Macquarie, Lane Cove, Leichhardt, Liverpool, Manly, Marrickville, Mosman, Mulwaree, North Sydney, Oberon, Orange, Parramatta, Penrith, Pittwater, Randwick, Rockdale, Ryde, Rylstone, Shellharbour, Shoalhaven, Singleton, South Sydney, Strathfield, Sutherland, Sydney City, Warringah, Waverley, Willoughby, Wingecarribee, Wollondilly, Wollongong, Woollahra and Wyong. The study area falls within the Sydney Basin IBRA -
Species List
Biodiversity Summary for NRM Regions Species List What is the summary for and where does it come from? This list has been produced by the Department of Sustainability, Environment, Water, Population and Communities (SEWPC) for the Natural Resource Management Spatial Information System. The list was produced using the AustralianAustralian Natural Natural Heritage Heritage Assessment Assessment Tool Tool (ANHAT), which analyses data from a range of plant and animal surveys and collections from across Australia to automatically generate a report for each NRM region. Data sources (Appendix 2) include national and state herbaria, museums, state governments, CSIRO, Birds Australia and a range of surveys conducted by or for DEWHA. For each family of plant and animal covered by ANHAT (Appendix 1), this document gives the number of species in the country and how many of them are found in the region. It also identifies species listed as Vulnerable, Critically Endangered, Endangered or Conservation Dependent under the EPBC Act. A biodiversity summary for this region is also available. For more information please see: www.environment.gov.au/heritage/anhat/index.html Limitations • ANHAT currently contains information on the distribution of over 30,000 Australian taxa. This includes all mammals, birds, reptiles, frogs and fish, 137 families of vascular plants (over 15,000 species) and a range of invertebrate groups. Groups notnot yet yet covered covered in inANHAT ANHAT are notnot included included in in the the list. list. • The data used come from authoritative sources, but they are not perfect. All species names have been confirmed as valid species names, but it is not possible to confirm all species locations. -
Biodiversity Survey and Assessment
l,, Ch ?,rles_ Sturt _____� 119 Un1vers1ty BIODIVERSITY SURVEY AND ASSESSMENT CHARLES STURT UNIVERSITY DUBBO Prepared by Colin C Bower PhD Biodiversity Assessment TABLE OF CONTENTS EXECUTIVE SUMMARY AND RECOMMENDATIONS 3 INTRODUCTION 6 THE STUDY AREA 6 Current and Former Land Use 8 Geology and Soils 8 Climate 9 Biogeographical and Botanical Regions 9 LITERATURE 10 THREATENED BIODIVERSITY 10 Threatened Flora and Fauna Species 10 Endangered Populations 11 Threatened Ecological Communities 20 Critical Habitat 20 METHODS 20 SURVEY TIMING AND SCOPE 20 WEATHER CONDITIONS 20 VEGETATION SAMPLING 24 Spot Sampling 24 Plantings 24 Searches for Threatened Species 25 Flora Species Listing 25 FAUNA SAMPLING 25 Amphibians 25 Reptiles 25 Birds 25 Mammals 25 Habitat Trees 26 Habitat Quality 26 Fauna Species Listing 26 RESULTS AND DISCUSSION 26 FLORA 26 Remnant Native Vegetation 26 The Original Vegetation 27 The Current Vegetation 29 Planted woodlots 29 Native grassland 31 Cropping and grazing paddocks 32 Ephemeral pond 34 Noxious and Nationally Significant Weeds 34 FAUNA 35 Birds 35 Mammals, Reptiles and Frogs 36 Habitat Trees 36 Pest Animals 37 THREATENED BIODIVERSITY 37 Threatened Flora Species 37 Threatened Ecological Communities 38 1 Biodiversity Assessment Threatened Fauna Species 38 AREAS IMPORTANT FOR BIODIVERSITY 42 ENVIRONMENTAL ISSUES 42 Salinisation 42 Noxious Animal control 42 Noxious Weed Control 42 RECOMMENDATIONS FOR BIODIVERSITY ENHANCEMENT 43 Principles 43 Biodiversity Recommendations 43 IMPACT ASSESSMENT 46 ASSESSMENTS OF SIGNIFICANCE 47 FLORA 47 Lobed Bluegrass 47 Other Threatened Flora 49 FAUNA 51 REFERENCES 57 APPENDIX 1. Flora Species List 60 APPENDIX 2. Bird Species List 66 APPENDIX 3. Suggested Plant Species for Rehabilitation Plantings 68 APPENDIX 4. -
Plant Communities of the South Eastern Highlands and Australian Alps Within the Murrumbidgee Catchment of New South Wales Version 1.1
Plant Communities of the South Eastern Highlands and Australian Alps within the Murrumbidgee Catchment of New South Wales Version 1.1 Cover photo: Riparian and dry forest plant communities adjacent to the Murrumbidgee River, Scottsdale Reserve (Bush Heritage Australia). Photographer: Rainer Rehwinkel The Office of Environment and Heritage NSW (OEH), part of the NSW Department of Premier and Cabinet, has compiled this report in good faith, exercising all due care and attention. OEH does not accept responsibility for any inaccurate or incomplete information supplied by third parties. No representation is made about the accuracy, completeness or suitability of the information in this publication for any particular purpose. OEH shall not be liable for any damage which may occur to any person or organisation taking action or not on the basis of this publication. Readers should seek appropriate advice when applying the information to their specific needs. This report should be cited as: Office of Environment and Heritage (2011) Plant Communities of the South Eastern Highlands and Australian Alps within the Murrumbidgee Catchment of New South Wales. Version 1.1. Technical Report. A Report to Catchment Action NSW. NSW Office of Environment and Heritage; Department of Premier and Cabinet, Queanbeyan. © Copyright State of NSW and the Office of Environment and Heritage. The State of NSW and OEH are pleased to allow this material to be reproduced in whole or in part for educational and non-commercial use, provided the meaning is unchanged and its source, publisher and authorship are acknowledged. Released by: Office of Environment and Heritage NSW 11 Farrer Place PO Box 733 Queanbeyan NSW 2620 Phone: (02) 6229 7000 (switchboard) OEH 2011/0613 August 2011 2 ACKNOWLEDGMENTS Project Coordination Data Analysis Rob Armstrong Ken Turner Keith McDougall Rob Armstrong Field Survey data collection Report Writing Contractors Rob Armstrong BlueGum Consulting (Tom O’Sullivan) Ken Turner David Eddy (privateer) Keith McDougall Ecological Australia Pty Ltd. -
Threatened Species Conservation Act 1995 No 101
Threatened Species Conservation Act 1995 No 101 Status information Currency of version Current version for 5 August 2016 to date (generated 11 August 2016 at 16:14). Legislation on the NSW legislation website is usually updated within 3 working days. Provisions in force All the provisions displayed in this version of the legislation have commenced. For commencement and other details see the Historical notes. Does not include amendments by: Environmental Planning and Assessment Amendment Act 2008 No 36 (amended by Statute Law (Miscellaneous Provisions) Act (No 2) 2014 No 88) (not commenced) This version of the legislation is compiled and maintained in a database of legislation by the Parliamentary Counsel’s Office and published on the NSW legislation website. New South Wales Threatened Species Conservation Act 1995 No 101 Contents Page Part 1 Preliminary 1 Name of Act 2 2 Commencement 2 3 Objects of Act 2 4 Definitions 2 4A Biodiversity values—meaning 5 5 Notes in text 5 5A Relationship between this Act and Part 7A of the Fisheries Management Act 1994 5 Part 2 Listing of threatened species, populations and ecological communities and key threatening processes Division 1 Lists of threatened species, populations and ecological communities and key threatening processes 6 Lists of endangered and critically endangered species, populations and ecological communities 7 7 Schedule 2 list of vulnerable species and ecological communities 8 8 Schedule 3 list of key threatening processes 8 9 Listing of nationally threatened species and ecological communities