Investigation of Pollen Limitation, Inbreeding and Outbreeding Depression and Heterosis in Euphrasia Stricta Var
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Priority Actions to Improve Provenance Decision-Making
Forum Priority Actions to Improve Provenance Decision-Making MARTIN F. BREED, PETER A. HARRISON, ARMIN BISCHOFF, PAULA DURRUTY, NICK J. C. GELLIE, EMILY K. GONZALES, KAYRI HAVENS, MARION KARMANN, FRANCIS F. KILKENNY, SIEGFRIED L. KRAUSS, ANDREW J. LOWE, PEDRO MARQUES, PAUL G. NEVILL, PATI L. VITT, AND ANNA BUCHAROVA Selecting the geographic origin—the provenance—of seed is a key decision in restoration. The last decade has seen a vigorous debate on whether to use local or nonlocal seed. The use of local seed has been the preferred approach because it is expected to maintain local adaptation and avoid deleterious population effects (e.g., maladaptation and outbreeding depression). However, the impacts of habitat fragmentation and climate change on plant populations have driven the debate on whether the local-is-best standard needs changing. This debate has largely been theoretical in nature, which hampers provenance decision-making. Here, we detail cross-sector priority actions to improve provenance decision-making, including embedding provenance trials into restoration projects; developing dynamic, evidence-based provenance policies; and establishing stronger research–practitioner collaborations to facilitate the adoption of research outcomes. We discuss how to tackle these priority actions in order to help satisfy the restoration sector’s requirement for appropriately provenanced seed. Keywords: assisted migration, ecological restoration, local adaptation, restoration genetics he restoration sector’s demand for seed is Williams et al. 2014, Havens et al. 2015, Prober et al. 2015, Tenormous and is rapidly increasing with the growth Breed et al. 2016b, Christmas et al. 2016b). in the global restoration effort (Verdone and Seidl 2017). -
Modeling Factors Affecting the Severity of Outbreeding Depression
Modeling Factors Affecting the Severity of Outbreeding Depression SUZANNE EDMANDS* AND CHARLES C. TIMMERMAN† *Department of Biological Sciences, University of Southern California, Los Angeles, CA 90089, U.S.A., email [email protected] †997 West 30th Street, Los Angeles CA 90007, U.S.A. Abstract: Hybridization between populations may cause either increased fitness (“hybrid vigor”) or de- creased fitness (“outbreeding depression”). Translocation between populations may therefore in some cases be a successful means of combating genetic erosion and preserving evolutionary potential, whereas in other cases it may make the situation worse by inducing outbreeding depression. Because genetic distance alone is a poor predictor of the success or failure of hybridization, we developed a computer model (ELAB) to explore other factors affecting the consequences of hybridization. Our model simulates diploid, unisexual popula- tions following Mendelian rules, and in this study we used it to test the effect of a variety of parameters on both the magnitude and duration of outbreeding depression. We focused our simulations on the effects of (1) divergence between populations, (2) the genetic basis of outbreeding depression (disruption of local adap- tation vs. intrinsic coadaptation), (3) population parameters such as mutation rate and recombination rate, and (4) alternative management schemes (50:50 mixture vs. one migrant per generation). The magnitude of outbreeding depression increased linearly with genetic distance, whereas the duration of outbreeding de- pression showed a more complex curvilinear relationship. With genetic distance held constant, magnitude in- creased with larger population size, lower mutation rate, cross-fertilization, and higher recombination rate, whereas duration increased with larger population size and partial self-fertilization. -
Examining Genetic Diversity, Outbreeding Depression, and Local Adaptation in a Native Fish Reintroduction Program a DISSERTATION
Examining genetic diversity, outbreeding depression, and local adaptation in a native fish reintroduction program A DISSERTATION SUBMITTED TO THE FACULTY OF THE GRADUATE SCHOOL OF THE UNIVERSITY OF MINNESOTA BY DAVID DERLAND HUFF IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY BRUCE VONDRACEK AND RAYMOND M. NEWMAN, CO-ADVISORS May 2010 © David Derland Huff, 2010 Acknowledgements I am grateful to so many people for their contributions to my work and well-being during my time at the University of Minnesota that is difficult for me to know where to begin. I will start with Bruce Vondracek, who was very involved in this research and went out of his way to make himself available, even on short notice. He was instrumental in helping me obtain resources and funding for research and somehow scrounged funds for travel on every occasion that I asked for it. We also enjoyed many fishing trips in which we cumulatively landed thousands of trout. He always out-fished me no matter how hard I tried, except once, thanks to one ugly little green fly. Austen Cargill II provided me with a fellowship (and the aforementioned green fly) for the duration of my time in Minnesota and was also present on most of our fishing trips. I would like to thank him for this funding and for his generous hospitality, interesting conversations, and valuable fly-fishing advice. Funding was also provided by a doctoral dissertation fellowship from the Graduate School of the University of Minnesota. The Minnesota Department of Natural Resources, U.S. -
Towards Resolving Lamiales Relationships
Schäferhoff et al. BMC Evolutionary Biology 2010, 10:352 http://www.biomedcentral.com/1471-2148/10/352 RESEARCH ARTICLE Open Access Towards resolving Lamiales relationships: insights from rapidly evolving chloroplast sequences Bastian Schäferhoff1*, Andreas Fleischmann2, Eberhard Fischer3, Dirk C Albach4, Thomas Borsch5, Günther Heubl2, Kai F Müller1 Abstract Background: In the large angiosperm order Lamiales, a diverse array of highly specialized life strategies such as carnivory, parasitism, epiphytism, and desiccation tolerance occur, and some lineages possess drastically accelerated DNA substitutional rates or miniaturized genomes. However, understanding the evolution of these phenomena in the order, and clarifying borders of and relationships among lamialean families, has been hindered by largely unresolved trees in the past. Results: Our analysis of the rapidly evolving trnK/matK, trnL-F and rps16 chloroplast regions enabled us to infer more precise phylogenetic hypotheses for the Lamiales. Relationships among the nine first-branching families in the Lamiales tree are now resolved with very strong support. Subsequent to Plocospermataceae, a clade consisting of Carlemanniaceae plus Oleaceae branches, followed by Tetrachondraceae and a newly inferred clade composed of Gesneriaceae plus Calceolariaceae, which is also supported by morphological characters. Plantaginaceae (incl. Gratioleae) and Scrophulariaceae are well separated in the backbone grade; Lamiaceae and Verbenaceae appear in distant clades, while the recently described Linderniaceae are confirmed to be monophyletic and in an isolated position. Conclusions: Confidence about deep nodes of the Lamiales tree is an important step towards understanding the evolutionary diversification of a major clade of flowering plants. The degree of resolution obtained here now provides a first opportunity to discuss the evolution of morphological and biochemical traits in Lamiales. -
Revegetation Priorities D
Revegetation Priorities D. Terrance Booth and Kenneth P. Vogel Introduction A cultivar is a variety, strain, or population of known genetic Revegetation is a needed means of mitigating man-made and origin, produced under cultivation in a way to ensure its natural disturbance. Our current ability to address environ- genetic integrity is maintained. mental insults contrasts sharply with that existing when John Muir fi rst sowed the roots of environmental awareness or Aldo Leopold and Hugh H. Bennett inspired a land ethic and a sense of stewardship. We now have considerable revegeta- There is agreement among land managers, Federal and tion science and experience and—equally important—viable state agencies, conservation groups, and scientists that the native-seed and revegetation industries expert in repairing decisions should be based on research and science. There are environmental damage. Through the National Plant Mate- hundreds of species on the rangelands of North America and rials program, related and usually cooperative work within rigorous genetic and adaptation studies have been conducted state universities and other entities, and the development of on only a few, so the scientifi c information base is small in ecological service industries, our society has heeded Leop- comparison to that of cultivated crops. Our intent here is to old’s call to take pride in the “husbandry” of wild plants.1 Yet, summarize key aspects of this problem, suggest some potential wild-plant husbandry is now being questioned, as is the wis- approaches and solutions, and encourage further research. dom of much of the knowledge, experience, and use of plant materials developed over the past 3 to 5 decades. -
Evaluating the Relative Risks of Inbreeding and Outbreeding for Conservation and Management
Molecular Ecology (2007) 16, 463–475 doi: 10.1111/j.1365-294X.2006.03148.x INVITEDBlackwell Publishing Ltd REVIEW Between a rock and a hard place: evaluating the relative risks of inbreeding and outbreeding for conservation and management SUZANNE EDMANDS Department of Biological Sciences, AHF 107, University of Southern California, Los Angeles, CA 90089-0371, USA Abstract As populations become increasingly fragmented, managers are often faced with the dilemma that intentional hybridization might save a population from inbreeding depression but it might also induce outbreeding depression. While empirical evidence for inbreeding depression is vastly greater than that for outbreeding depression, the available data suggest that risks of outbreeding, particularly in the second generation, are on par with the risks of inbreeding. Predicting the relative risks in any particular situation is complicated by vari- ation among taxa, characters being measured, level of divergence between hybridizing populations, mating history, environmental conditions and the potential for inbreeding and outbreeding effects to be occurring simultaneously. Further work on consequences of interpopulation hybridization is sorely needed with particular emphasis on the taxonomic scope, the duration of fitness problems and the joint effects of inbreeding and outbreeding. Meanwhile, managers can minimize the risks of both inbreeding and outbreeding by using intentional hybridization only for populations clearly suffering from inbreeding depression, maximizing the genetic and adaptive similarity between populations, and testing the effects of hybridization for at least two generations whenever possible. Keywords: fitness, hybridization, inbreeding depression, outbreeding depression Received 21 May 2006; revision accepted 1 September 2006 times more fit than the resident lineages (Ebert et al. -
Histochemical and Phytochemical Analysis of Lamium Album Subsp
molecules Article Histochemical and Phytochemical Analysis of Lamium album subsp. album L. Corolla: Essential Oil, Triterpenes, and Iridoids Agata Konarska 1, Elzbieta˙ Weryszko-Chmielewska 1, Anna Matysik-Wo´zniak 2 , Aneta Sulborska 1,*, Beata Polak 3 , Marta Dmitruk 1,*, Krystyna Piotrowska-Weryszko 1, Beata Stefa ´nczyk 3 and Robert Rejdak 2 1 Department of Botany and Plant Physiology, University of Life Sciences, Akademicka 15, 20-950 Lublin, Poland; [email protected] (A.K.); [email protected] (E.W.-C.); [email protected] (K.P.-W.) 2 Department of General Ophthalmology, Medical University of Lublin, Chmielna 1, 20-079 Lublin, Poland; [email protected] (A.M.-W.); [email protected] (R.R.) 3 Department of Physical Chemistry, Medical University of Lublin, Chod´zki4A, 20-093 Lublin, Poland; [email protected] (B.P.); offi[email protected] (B.S.) * Correspondence: [email protected] (A.S.); [email protected] (M.D.); Tel.: +48-81-445-65-79 (A.S.); +48-81-445-68-13 (M.D.) Abstract: The aim of this study was to conduct a histochemical analysis to localize lipids, terpenes, essential oil, and iridoids in the trichomes of the L. album subsp. album corolla. Morphometric examinations of individual trichome types were performed. Light and scanning electron microscopy Citation: Konarska, A.; techniques were used to show the micromorphology and localization of lipophilic compounds and Weryszko-Chmielewska, E.; iridoids in secretory trichomes with the use of histochemical tests. Additionally, the content of Matysik-Wo´zniak,A.; Sulborska, A.; essential oil and its components were determined using gas chromatography-mass spectrometry Polak, B.; Dmitruk, M.; (GC-MS). -
Flora of Vascular Plants of the Seili Island and Its Surroundings (SW Finland)
Biodiv. Res. Conserv. 53: 33-65, 2019 BRC www.brc.amu.edu.pl DOI 10.2478/biorc-2019-0003 Submitted 20.03.2018, Accepted 10.01.2019 Flora of vascular plants of the Seili island and its surroundings (SW Finland) Andrzej Brzeg1, Wojciech Szwed2 & Maria Wojterska1* 1Department of Plant Ecology and Environmental Protection, Faculty of Biology, Adam Mickiewicz University in Poznań, Umultowska 89, 61-614 Poznań, Poland 2Department of Forest Botany, Faculty of Forestry, Poznań University of Life Sciences, Wojska Polskiego 71D, 60-625 Poznań, Poland * corresponding author (e-mail: [email protected]; ORCID: https://orcid.org/0000-0002-7774-1419) Abstract. The paper shows the results of floristic investigations of 12 islands and several skerries of the inner part of SW Finnish archipelago, situated within a square of 11.56 km2. The research comprised all vascular plants – growing spontaneously and cultivated, and the results were compared to the present flora of a square 10 × 10 km from the Atlas of Vascular Plants of Finland, in which the studied area is nested. The total flora counted 611 species, among them, 535 growing spontaneously or escapees from cultivation, and 76 exclusively in cultivation. The results showed that the flora of Seili and adjacent islands was almost as rich in species as that recorded in the square 10 × 10 km. This study contributed 74 new species to this square. The hitherto published analyses from this area did not focus on origin (geographic-historical groups), socioecological groups, life forms and on the degree of threat of recorded species. Spontaneous flora of the studied area constituted about 44% of the whole flora of Regio aboënsis. -
Mixed-Source Reintroductions Lead to Outbreeding Depression in Second-Generation Descendents of a Native North American Fish
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Nebraska Cooperative Fish & Wildlife Research Nebraska Cooperative Fish & Wildlife Research Unit -- Staff Publications Unit 2011 Mixed-source reintroductions lead to outbreeding depression in second-generation descendents of a native North American fish David D. Huff University of Minnesota, [email protected] Loren M. Miller University of Minnesota Christopher J. Chizinski University of Minnesota, [email protected] Bruce Vondracek University of Minnesota, [email protected] Follow this and additional works at: https://digitalcommons.unl.edu/ncfwrustaff Part of the Aquaculture and Fisheries Commons, Environmental Indicators and Impact Assessment Commons, Environmental Monitoring Commons, Natural Resource Economics Commons, Natural Resources and Conservation Commons, and the Water Resource Management Commons Huff, David D.; Miller, Loren M.; Chizinski, Christopher J.; and Vondracek, Bruce, "Mixed-source reintroductions lead to outbreeding depression in second-generation descendents of a native North American fish" (2011). Nebraska Cooperative Fish & Wildlife Research Unit -- Staff Publications. 194. https://digitalcommons.unl.edu/ncfwrustaff/194 This Article is brought to you for free and open access by the Nebraska Cooperative Fish & Wildlife Research Unit at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Nebraska Cooperative Fish & Wildlife Research Unit -- Staff Publications by an authorized administrator of DigitalCommons@University -
Outbreeding Depression As a Selective Force on Mixed Mating in the Mangrove Rivulus Fish, Kryptolebias Marmoratus
bioRxiv preprint doi: https://doi.org/10.1101/2021.02.22.432322; this version posted February 22, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Outbreeding depression as a selective force on mixed mating in the mangrove rivulus fish, Kryptolebias marmoratus bioRxiv preprint doi: https://doi.org/10.1101/2021.02.22.432322; this version posted February 22, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract Mixed mating, a reproduction strategy utilized by many plants and invertebrates, optimizes the cost to benefit ratio of a labile mating system. One type of mixed mating includes outcrossing with conspecifics and self-fertilizing one’s own eggs. The mangrove rivulus fish (Kryptolebias marmoratus) is one of two vertebrates known to employ both self-fertilization (selfing) and outcrossing. Variation in rates of outcrossing and selfing within and among populations produces individuals with diverse levels of heterozygosity. I designed an experiment to explore the consequences of variable heterozygosity across four ecologically relevant conditions of salinity and water availability (10‰, 25‰, and 40‰ salinity, and twice daily tide changes). I report a significant increase in mortality in the high salinity (40‰) treatment. I also report significant effects on fecundity measures with increasing heterozygosity. The odds of laying eggs decreased with increasing heterozygosity across all treatments, and the number of eggs laid decreased with increasing heterozygosity in the 10‰ and 25‰ treatments. -
Homozygosity at Its Limit: Inbreeding Depression in Wild Arabidopsis Arenosa Populations
bioRxiv preprint doi: https://doi.org/10.1101/2021.01.24.427284; this version posted January 25, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Barragan et al. Inbreeding Depression in A. arenosa Homozygosity at its Limit: Inbreeding Depression in Wild Arabidopsis arenosa Populations A. Cristina Barragan1, Maximilian Collenberg1, Rebecca Schwab1, Merijn Kerstens1a, Ilja Bezrukov1, Felix Bemm1,b, Doubravka Požárová2, Filip Kolář2, Detlef Weigel1* 1Department of Molecular Biology, Max Planck Institute for Developmental Biology, 72076 Tübingen, Germany 2Department of Botany, Faculty of Science, Charles University, 128 01 Prague, Czech Republic aCurrent address: Department of Plant Developmental Biology, Wageningen University and Research, 6708 PB, Wageningen, Netherlands bCurrent address: KWS Saat, 37574 Einbeck, Germany *Corresponding author: [email protected] (D.W.) Keywords: Arabidopsis arenosa, wild populations, deleterious phenotypes, inbreeding depression Abstract New combinations of genetic material brought together through hybridization can lead to unfit offspring as a result of outbreeding or inbreeding depression. In selfing plants such as Arabidopsis thaliana, outbreeding depression is typically the result of pairwise deleterious epistatic interactions between two alleles that can geographically co-occur. What remains elusive is how often alleles resulting in genetic incompatibilities co-occur in natural populations of outcrossing plant species. To address this question, we screened over two thousand five hundred wild Arabidopsis arenosa hybrid plants in search for potential genetic mismatches. We show that although abnormal deleterious phenotypes are common, the transcriptional profiles of these abnormal A. -
Evolutionary History and Genetic Connectivity Across Highly Fragmented Populations of an Endangered Daisy
Heredity (2021) 126:846–858 https://doi.org/10.1038/s41437-021-00413-0 ARTICLE Evolutionary history and genetic connectivity across highly fragmented populations of an endangered daisy 1 1 2 3 1 Yael S. Rodger ● Alexandra Pavlova ● Steve Sinclair ● Melinda Pickup ● Paul Sunnucks Received: 29 May 2020 / Revised: 24 January 2021 / Accepted: 25 January 2021 / Published online: 19 February 2021 © The Author(s) 2021. This article is published with open access Abstract Conservation management can be aided by knowledge of genetic diversity and evolutionary history, so that ecological and evolutionary processes can be preserved. The Button Wrinklewort daisy (Rutidosis leptorrhynchoides) was a common component of grassy ecosystems in south-eastern Australia. It is now endangered due to extensive habitat loss and the impacts of livestock grazing, and is currently restricted to a few small populations in two regions >500 km apart, one in Victoria, the other in the Australian Capital Territory and nearby New South Wales (ACT/NSW). Using a genome-wide SNP dataset, we assessed patterns of genetic structure and genetic differentiation of 12 natural diploid populations. We estimated intrapopulation genetic diversity to scope sources for genetic management. Bayesian clustering and principal coordinate 1234567890();,: 1234567890();,: analyses showed strong population genetic differentiation between the two regions, and substantial substructure within ACT/ NSW. A coalescent tree-building approach implemented in SNAPP indicated evolutionary divergence between the two distant regions. Among the populations screened, the last two known remaining Victorian populations had the highest genetic diversity, despite having among the lowest recent census sizes. A maximum likelihood population tree method implemented in TreeMix suggested little or no recent gene flow except potentially between very close neighbours.