Peripatric Speciation Andrew Z
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Tc Balikesir Üniversitesi Fen Bilimleri
T.C. BALIKESİR ÜNİVERSİTESİ FEN BİLİMLERİ ENSTİTÜSÜ BİYOLOJİ ANABİLİM DALI TÜRKİYE’DE YETİŞEN INULA L. (ASTERACEAE) TÜRLERİNİN MOLEKÜLER SİSTEMATİK ANALİZİ VE EKOLOJİSİ DOKTORA TEZİ EMRE SEVİNDİK BALIKESİR, MAYIS - 2014 T.C. BALIKESİR ÜNİVERSİTESİ FEN BİLİMLERİ ENSTİTÜSÜ BİYOLOJİ ANABİLİM DALI TÜRKİYE’DE YETİŞEN INULA L. (ASTERACEAE) TÜRLERİNİN MOLEKÜLER SİSTEMATİK ANALİZİ VE EKOLOJİSİ DOKTORA TEZİ EMRE SEVİNDİK BALIKESİR, MAYIS - 2014 KABUL VE ONAY SAYFASI EMRE SEVİNDİK tarafından hazırlanan “TÜRKİYE’DE YETİŞEN INULA L. (ASTERACEAE) TÜRLERİNİN MOLEKÜLER SİSTEMATİK ANALİZİ VE EKOLOJİSİ” adlı tez çalışmasının savunma sınavı 02.05.2014 tarihinde yapılmış olup aşağıda verilen jüri tarafından oy birliği / oy çokluğu ile Balıkesir Üniversitesi Fen Bilimleri Enstitüsü Biyoloji Anabilim Dalı Doktora Tezi olarak kabul edilmiştir. Jüri Üyeleri İmza Danışman Yard.Doç.Dr. Fatih COŞKUN Üye Prof.Dr. Gülendam TÜMEN ............ Üye Prof.Dr. Ali ÇELİK ................ Üye Prof.Dr. Ahmet DURAN ................ Üye Doç.Dr. Ekrem DÜNDAR .................. Jüri üyeleri tarafından kabul edilmiş olan bu tez BAÜ Fen Bilimleri Enstitüsü Yönetim Kurulunca onanmıştır. Fen Bilimleri Enstitüsü Müdürü Prof. Dr. Cihan ÖZGÜR ............................................. Bu tez çalışması Balıkesir Üniversitesi Bilimsel Araştırma Projeler Birimi tarafından BAP 2013/92 nolu proje ile desteklenmiştir. ÖZET TÜRKİYE’DE YETİŞEN INULA L. (ASTERACEAE) TÜRLERİNİN MOLEKÜLER SİSTEMATİK ANALİZİ VE EKOLOJİSİ DOKTORA TEZİ EMRE SEVİNDİK BALIKESİR ÜNİVERSİTESİ FEN BİLİMLERİ ENSTİTÜSÜ -
Local and Regional Influences on Arthropod Community
LOCAL AND REGIONAL INFLUENCES ON ARTHROPOD COMMUNITY STRUCTURE AND SPECIES COMPOSITION ON METROSIDEROS POLYMORPHA IN THE HAWAIIAN ISLANDS A DISSERTATION SUBMITTED TO THE GRADUATE DIVISION OF THE UNIVERSITY OF HAWAI'I IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY IN ZOOLOGY (ECOLOGY, EVOLUTION AND CONSERVATION BIOLOGy) AUGUST 2004 By Daniel S. Gruner Dissertation Committee: Andrew D. Taylor, Chairperson John J. Ewel David Foote Leonard H. Freed Robert A. Kinzie Daniel Blaine © Copyright 2004 by Daniel Stephen Gruner All Rights Reserved. 111 DEDICATION This dissertation is dedicated to all the Hawaiian arthropods who gave their lives for the advancement ofscience and conservation. IV ACKNOWLEDGEMENTS Fellowship support was provided through the Science to Achieve Results program of the U.S. Environmental Protection Agency, and training grants from the John D. and Catherine T. MacArthur Foundation and the National Science Foundation (DGE-9355055 & DUE-9979656) to the Ecology, Evolution and Conservation Biology (EECB) Program of the University of Hawai'i at Manoa. I was also supported by research assistantships through the U.S. Department of Agriculture (A.D. Taylor) and the Water Resources Research Center (RA. Kay). I am grateful for scholarships from the Watson T. Yoshimoto Foundation and the ARCS Foundation, and research grants from the EECB Program, Sigma Xi, the Hawai'i Audubon Society, the David and Lucille Packard Foundation (through the Secretariat for Conservation Biology), and the NSF Doctoral Dissertation Improvement Grant program (DEB-0073055). The Environmental Leadership Program provided important training, funds, and community, and I am fortunate to be involved with this network. -
Pu'u Wa'awa'a Biological Assessment
PU‘U WA‘AWA‘A BIOLOGICAL ASSESSMENT PU‘U WA‘AWA‘A, NORTH KONA, HAWAII Prepared by: Jon G. Giffin Forestry & Wildlife Manager August 2003 STATE OF HAWAII DEPARTMENT OF LAND AND NATURAL RESOURCES DIVISION OF FORESTRY AND WILDLIFE TABLE OF CONTENTS TITLE PAGE ................................................................................................................................. i TABLE OF CONTENTS ............................................................................................................. ii GENERAL SETTING...................................................................................................................1 Introduction..........................................................................................................................1 Land Use Practices...............................................................................................................1 Geology..................................................................................................................................3 Lava Flows............................................................................................................................5 Lava Tubes ...........................................................................................................................5 Cinder Cones ........................................................................................................................7 Soils .......................................................................................................................................9 -
Historical Biogeography of Thyrsophorini Psocids and Description of a New Neotropical Species of Thyrsopsocopsis (Psocodea: Psocomorpha: Psocidae)
European Journal of Taxonomy 194: 1–16 ISSN 2118-9773 http://dx.doi.org/10.5852/ejt.2016.194 www.europeanjournaloftaxonomy.eu 2016 · Román-Palacios C. et al. This work is licensed under a Creative Commons Attribution 3.0 License. Research article urn:lsid:zoobank.org:pub:96E9EA43-F6FE-492E-97BE-60DFB8EDE935 Historical biogeography of Thyrsophorini psocids and description of a new neotropical species of Thyrsopsocopsis (Psocodea: Psocomorpha: Psocidae) Cristian ROMÁN-PALACIOS 1,*, Alfonso N. GARCÍA ALDRETE 2 & Ranulfo GONZÁLEZ OBANDO 3 1,3 Departamento de Biología, Facultad de Ciencias Naturales y Exactas, Universidad del Valle, Santiago de Cali, Colombia. 2 Departamento de Zoología, Instituto de Biología, Universidad Nacional Autónoma de México, Apartado Postal 70-153, 04510 Mexico City, Mexico. * Corresponding author: [email protected] 1 urn:lsid:zoobank.org:author:E88D0518-B6CB-4FE7-9EFC-F789EA6F05AD 2 urn:lsid:zoobank.org:author:9E03B921-78AE-4ED6-B1EA-9DCA01BE20BC 3 urn:lsid:zoobank.org:author:16C7AD76-F035-4C8B-8C00-A228CCCD39B0 Abstract. When based on phylogenetic proposals, biogeographic historic narratives have a great interest for hypothesizing paths of origin of the current biodiversity. Among the many questions that remain unsolved about psocids, the distribution of Thyrsophorini represents still a remarkable enigma. This tribe had been considered as exclusively Neotropical, until the description of Thyrsopsocopsis thorntoni Mockford, 2004, from Vietnam. Three hypotheses have been proposed to explain this atypical distribution, recurring to dispersal, vicariance and morphological parallelism between lineages, but the lack of evidence has not allowed a unique support. Here, we describe a new Neotropical species of Thyrsopsocopsis, and also attempt to test the three biogeographical hypotheses in a phylogenetic context. -
Southern Wing-Banded Antbird, Myrmornis Torquata Myrmornithinae
Thamnophilidae: Antbirds, Species Tree I Northern Wing-banded Antbird, Myrmornis stictoptera ⋆Southern Wing-banded Antbird, Myrmornis torquata ⋆ Myrmornithinae Spot-winged Antshrike, Pygiptila stellaris Russet Antshrike, Thamnistes anabatinus Rufescent Antshrike, Thamnistes rufescens Guianan Rufous-rumped Antwren, Euchrepomis guianensus ⋆Western Rufous-rumped Antwren, Euchrepomis callinota Euchrepomidinae Yellow-rumped Antwren, Euchrepomis sharpei Ash-winged Antwren, Euchrepomis spodioptila Chestnut-shouldered Antwren, Euchrepomis humeralis ⋆Stripe-backed Antbird, Myrmorchilus strigilatus ⋆Dot-winged Antwren, Microrhopias quixensis ⋆Yapacana Antbird, Aprositornis disjuncta ⋆Black-throated Antbird, Myrmophylax atrothorax ⋆Gray-bellied Antbird, Ammonastes pelzelni MICRORHOPIINI ⋆Recurve-billed Bushbird, Neoctantes alixii ⋆Black Bushbird, Neoctantes niger Rondonia Bushbird, Neoctantes atrogularis Checker-throated Stipplethroat, Epinecrophylla fulviventris Western Ornate Stipplethroat, Epinecrophylla ornata Eastern Ornate Stipplethroat, Epinecrophylla hoffmannsi Rufous-tailed Stipplethroat, Epinecrophylla erythrura White-eyed Stipplethroat, Epinecrophylla leucophthalma Brown-bellied Stipplethroat, Epinecrophylla gutturalis Foothill Stipplethroat, Epinecrophylla spodionota Madeira Stipplethroat, Epinecrophylla amazonica Roosevelt Stipplethroat, Epinecrophylla dentei Negro Stipplethroat, Epinecrophylla pyrrhonota Brown-backed Stipplethroat, Epinecrophylla fjeldsaai ⋆Napo Stipplethroat, Epinecrophylla haematonota ⋆Streak-capped Antwren, Terenura -
Kosuda, K. Viability of Drosophila Melanogaster Female Flies Carrying
Dros. Inf. Serv. 97 (2014) Research Notes 131 Drosophila it was also shown that mating latency is also affected by body size, age, and diet (Hegde and Krishna, 1997; Somashekar and Krishna 2011; Singh and Sisodia, 2012). In P. straiata courtship activities of male and female culminate in copulation (Latha and Krishna, 2014). Longer copulation is an adaptation of males which could reduce the risk of sperm competition with future ejaculations with the help of mating plug which prevents the female from remating before oviposition (Gilchrist and Partridge, 2000). In the present study it was found that flies grown on organic banana fruit had copulated significantly longer compared to flies grown on non-organic banana and wheat cream agar media (Figure 3 and Table 1). Our results in P. straiata confirm work of organic banana fruit on reproduction (Chabra et al., 2013). Longer the duration of copulation, greater is the transfer of accessory gland proteins and sperm to the mated female (Hegde and Krishna, 1997; Somashekar and Krishna, 2011). Fecundity is the most obvious trait that influences the reproductive ability of female usually considered as female fitness component. It is known that fecundity is influenced by age, body size, and diet of an organism (Krishna and Hegde 1997). In P. straiata flies grown on organic banana fruit based media had greater number of ovarioles compared to flies grown in other two media (Figure 4 and Table 1). In the present study, flies used were of same age and were grown in same conditions but foods were different. Therefore, in the present study quality of food had influenced fecundity in P. -
AOU Classification Committee – North and Middle America
AOU Classification Committee – North and Middle America Proposal Set 2016-C No. Page Title 01 02 Change the English name of Alauda arvensis to Eurasian Skylark 02 06 Recognize Lilian’s Meadowlark Sturnella lilianae as a separate species from S. magna 03 20 Change the English name of Euplectes franciscanus to Northern Red Bishop 04 25 Transfer Sandhill Crane Grus canadensis to Antigone 05 29 Add Rufous-necked Wood-Rail Aramides axillaris to the U.S. list 06 31 Revise our higher-level linear sequence as follows: (a) Move Strigiformes to precede Trogoniformes; (b) Move Accipitriformes to precede Strigiformes; (c) Move Gaviiformes to precede Procellariiformes; (d) Move Eurypygiformes and Phaethontiformes to precede Gaviiformes; (e) Reverse the linear sequence of Podicipediformes and Phoenicopteriformes; (f) Move Pterocliformes and Columbiformes to follow Podicipediformes; (g) Move Cuculiformes, Caprimulgiformes, and Apodiformes to follow Columbiformes; and (h) Move Charadriiformes and Gruiformes to precede Eurypygiformes 07 45 Transfer Neocrex to Mustelirallus 08 48 (a) Split Ardenna from Puffinus, and (b) Revise the linear sequence of species of Ardenna 09 51 Separate Cathartiformes from Accipitriformes 10 58 Recognize Colibri cyanotus as a separate species from C. thalassinus 11 61 Change the English name “Brush-Finch” to “Brushfinch” 12 62 Change the English name of Ramphastos ambiguus 13 63 Split Plain Wren Cantorchilus modestus into three species 14 71 Recognize the genus Cercomacroides (Thamnophilidae) 15 74 Split Oceanodroma cheimomnestes and O. socorroensis from Leach’s Storm- Petrel O. leucorhoa 2016-C-1 N&MA Classification Committee p. 453 Change the English name of Alauda arvensis to Eurasian Skylark There are a dizzying number of larks (Alaudidae) worldwide and a first-time visitor to Africa or Mongolia might confront 10 or more species across several genera. -
EXPERIMENTAL EVIDENCE for SALTATIONAL CHROMOSOME EVOLUTION in CAL YCADENIA PAUCIFLORA GRAY (ASTERACEAE) Pauciflora Are Fairly Fe
Heredity (1980), 45 (1), 107-112 0018-067X/80/01940107$02.0O 1980. The Genetical Society of Great Britain EXPERIMENTALEVIDENCE FOR SALTATIONAL CHROMOSOME EVOLUTION IN CAL YCADENIA PAUCIFLORA GRAY (ASTERACEAE) GERALD D. CARR Department of Botany, University of Hawaii, 3190 Maile Way, Honolulu, Hawaii 96822, U.S.A. Received14.i.80 SUMMARY The fertility of the F1 structural heterozygote formed by crossing two aneuploid chromosome races of Calycadenia pauciflora is high despite the fact they are differentiated by the equivalent of three chromosome translocations. This and the fact that ancestral and derived structural homozygotes were recovered in experimental F2 and F3 progenies support the hypothesis that the derived race could have originated directly from the ancestral race in nature through a single saltational event involving multiple chromosome breaks. Two individuals with structurally unique, recombined chromosomes were also recovered in the F2 and the evolutionary potential of such products of meiosis in structural heterozygotes is considered to be significant. 1. INTRODUCTION THERE have been several experimental studies documenting the existence of pairs or groups of diploid plant species differentiated by little more than chromosome alterations, often accompanied by aneuploidy. Calycadenia, Chaenactis, Clarkia and Crepis are just a few of the genera in which this situation is best known or more frequent. In Clarkia, Lewis (1966) referred to this process of differentiation as saltational speciation. Others have used the term quantum evolution or quantum speciation in reference to this general phenomenon (cf. Grant, 1971). This type of chromosomal evolution requires that a new structural heterozygote pass through a "bottleneck of sterility" before the derived structural homozygote can be produced (cf. -
Tempo and Mode in the Macroevolutionary Reconstruction of Darwinism STEPHEN JAY GOULD Museum of Comparative Zoology, Harvard University, Cambridge, MA 02138
Proc. Nadl. Acad. Sci. USA Vol. 91, pp. 6764-6771, July 1994 Colloquium Paper This paper was presented at a coloquium ented "Tempo and Mode in Evolution" organized by Walter M. Fitch and Francisco J. Ayala, held January 27-29, 1994, by the National Academy of Sciences, in Irvine, CA. Tempo and mode in the macroevolutionary reconstruction of Darwinism STEPHEN JAY GOULD Museum of Comparative Zoology, Harvard University, Cambridge, MA 02138 ABSTRACT Among the several central nings of Dar- But conceptual complexity is not reducible to a formula or winism, his version ofLyellian uniformitranism-the extrap- epigram (as we taxonomists of life's diversity should know olationist commitment to viewing causes ofsmall-scale, observ- better than most). Too much ink has been wasted in vain able change in modern populations as the complete source, by attempts to define the essence ofDarwin's ideas, or Darwin- smooth extension through geological time, of all magnitudes ism itself. Mayr (1) has correctly emphasized that many and sequences in evolution-has most contributed to the causal different, if related, Darwinisms exist, both in the thought of hegemony of microevolutlon and the assumption that paleon- the eponym himself, and in the subsequent history of evo- tology can document the contingent history of life but cannot lutionary biology-ranging from natural selection, to genea- act as a domain of novel evolutionary theory. G. G. Simpson logical connection of all living beings, to gradualism of tried to combat this view of paleontology as theoretically inert change. in his classic work, Tempo and Mode in Evolution (1944), with It would therefore be fatuous to claim that any one legit- a brilliant argument that the two subjects of his tide fall into a imate "essence" can be more basic or important than an- unue paleontological domain and that modes (processes and other. -
Darwinian Evolution and Quantum Evolution
tics: Cu ne rr e en Nemer et al., Hereditary Genet 2017, 6:2 G t y R r e a t s i e DOI: 10.4172/2161-1041.1000181 d a e r r c e h H Hereditary Genetics ISSN: 2161-1041 Research Article Open Access Darwinian Evolution and Quantum Evolution are Complementary: A Perspective Georges Nemer1, Christina Bergqvist2 and Mazen Kurban1,2,3* 1Department of Biochemistry and Molecular Genetics, American University of Beirut, Beirut, Lebanon 2Department of Dermatology, American University of Beirut, Beirut, Lebanon 3Department of Dermatology, Columbia University, New York, USA Abstract Evolutionary biology has fascinated scientists since Charles Darwin who cornered the concept of natural selection in the 19th century. Accordingly, organisms better adapted to their environment tend to survive and produce more offspring; in other terms, randomly occurring mutations that render the organism more fit to survival will be carried on and be transmitted to the offspring. Nearly a century later, science has seen the discovery of quantum mechanics, the branch of mechanics that deals with subatomic particles. Along with it, came the theory of quantum evolution whereby quantum effects can bias the process of mutation towards providing an advantage for organism survival. This is consistent with looking at the biological system as being a product of chemical-physical reactions, such that chemical structures arrange according to physical laws to form a replicative material referred to as the DNA. In this report, we attempt to reconcile both theories, trying to demonstrate that they complement each other, hoping to fill the gaps in our understandings of the versatility of the mutational status of the DNA as an essential mechanism of life compatibility. -
Abies Bracteata Revised 2011 1 Abies Bracteata (D. Don) Poit
Lead Forest: Los Padres National Forest Forest Service Endemic: No Abies bracteata (D. Don) Poit. (bristlecone fir) Known Potential Synonym: Abies venusta (Douglas ex Hook.) K. Koch; Pinus bracteata D. Don; Pinus venusta Douglas ex Hook (Tropicos 2011). Table 1. Legal or Protection Status (CNDDB 2011, CNPS 2011, and Other Sources). Federal Listing Status; State Heritage Rank California Rare Other Lists Listing Status Plant Rank None; None G2/S2.3 1B.3 USFS Sensitive Plant description: Abies bracteata (Pinaceae) (Fig. 1) is a perennial monoecious plant with trunks longer than 55 m and less than 1.3 m wide. The branches are more-or-less drooping, and the bark is thin. The twigs are glabrous, and the buds are 1-2.5 cm long, sharp-pointed, and non- resinous. The leaves are less than 6 cm long, are dark green, faintly grooved on their upper surfaces, and have tips that are sharply spiny. Seed cones are less than 9 cm long with stalks that are under15 mm long. The cones have bracts that are spreading, exserted, and that are 1.5–4.5 cm long with a slender spine at the apex. Taxonomy: Abies bracteata is a fir species and a member of the pine family (Pinaceae). Out of the fir species growing in North America (Griffin and Critchfield 1976), Abies bracteata has the smallest range and is the least abundant. Identification: Many features of A. bracteata can be used to distinguish this species from other conifers, including the sharp-tipped needles, thin bark, club-shaped crown, non-resinous buds, and exserted spine tipped bracts (Gymnosperms Database 2010). -
Diversification in the Hawaiian Drosophila
Diversification in the Hawaiian Drosophila By Richard Thomas Lapoint A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Environmental Science, Policy and Management in the Graduate Division of the University of California, Berkeley Committee in charge: Professor Patrick M. O’Grady, Chair Professor George K. Roderick Professor Craig Moritz Spring 2011 ! Diversification in the Hawaiian Drosophila Copyright 2011 By Richard Thomas Lapoint ! Abstract Diversification in the Hawaiian Drosophila by Richard Thomas Lapoint Doctor of Philosophy in Environmental Science, Policy and Management University of California, Berkeley Professor Patrick M. O’Grady, Chair The Hawaiian Islands have been recognized as an ideal place to study evolutionary processes due to their remote location, multitude of ecological niches and diverse biota. As the oldest and largest radiation in the Hawaiian Islands the Hawaiian Drosophilidae have been the focus of decades of evolutionary research and subsequently the basis for understanding how much of the diversity within these islands and other island systems have been generated. This dissertation revolves around the diversification of a large clade of Hawaiian Drosophila, and examines the molecular evolution of this group at several different temporal scales. The antopocerus, modified tarsus, ciliated tarsus (AMC) clade is a group of 90 described Drosophila species that utilize decaying leafs as a host substrate and are characterized by a set of diagnostic secondary sexual characters: modifications in either antennal or tarsal morphologies. This research uses both phylogenetic and population genetic methods to study how this clade has evolved at increasingly finer evolutionary scales, from lineage to population level.