Allosteric Modulators of GABAB Receptors
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Molecular Dissection of G-Protein Coupled Receptor Signaling and Oligomerization
MOLECULAR DISSECTION OF G-PROTEIN COUPLED RECEPTOR SIGNALING AND OLIGOMERIZATION BY MICHAEL RIZZO A Dissertation Submitted to the Graduate Faculty of WAKE FOREST UNIVERSITY GRADUATE SCHOOL OF ARTS AND SCIENCES in Partial Fulfillment of the Requirements for the Degree of DOCTOR OF PHILOSOPHY Biology December, 2019 Winston-Salem, North Carolina Approved By: Erik C. Johnson, Ph.D. Advisor Wayne E. Pratt, Ph.D. Chair Pat C. Lord, Ph.D. Gloria K. Muday, Ph.D. Ke Zhang, Ph.D. ACKNOWLEDGEMENTS I would first like to thank my advisor, Dr. Erik Johnson, for his support, expertise, and leadership during my time in his lab. Without him, the work herein would not be possible. I would also like to thank the members of my committee, Dr. Gloria Muday, Dr. Ke Zhang, Dr. Wayne Pratt, and Dr. Pat Lord, for their guidance and advice that helped improve the quality of the research presented here. I would also like to thank members of the Johnson lab, both past and present, for being valuable colleagues and friends. I would especially like to thank Dr. Jason Braco, Dr. Jon Fisher, Dr. Jake Saunders, and Becky Perry, all of whom spent a great deal of time offering me advice, proofreading grants and manuscripts, and overall supporting me through the ups and downs of the research process. Finally, I would like to thank my family, both for instilling in me a passion for knowledge and education, and for their continued support. In particular, I would like to thank my wife Emerald – I am forever indebted to you for your support throughout this process, and I will never forget the sacrifices you made to help me get to where I am today. -
GABA Receptors
D Reviews • BIOTREND Reviews • BIOTREND Reviews • BIOTREND Reviews • BIOTREND Reviews Review No.7 / 1-2011 GABA receptors Wolfgang Froestl , CNS & Chemistry Expert, AC Immune SA, PSE Building B - EPFL, CH-1015 Lausanne, Phone: +41 21 693 91 43, FAX: +41 21 693 91 20, E-mail: [email protected] GABA Activation of the GABA A receptor leads to an influx of chloride GABA ( -aminobutyric acid; Figure 1) is the most important and ions and to a hyperpolarization of the membrane. 16 subunits with γ most abundant inhibitory neurotransmitter in the mammalian molecular weights between 50 and 65 kD have been identified brain 1,2 , where it was first discovered in 1950 3-5 . It is a small achiral so far, 6 subunits, 3 subunits, 3 subunits, and the , , α β γ δ ε θ molecule with molecular weight of 103 g/mol and high water solu - and subunits 8,9 . π bility. At 25°C one gram of water can dissolve 1.3 grams of GABA. 2 Such a hydrophilic molecule (log P = -2.13, PSA = 63.3 Å ) cannot In the meantime all GABA A receptor binding sites have been eluci - cross the blood brain barrier. It is produced in the brain by decarb- dated in great detail. The GABA site is located at the interface oxylation of L-glutamic acid by the enzyme glutamic acid decarb- between and subunits. Benzodiazepines interact with subunit α β oxylase (GAD, EC 4.1.1.15). It is a neutral amino acid with pK = combinations ( ) ( ) , which is the most abundant combi - 1 α1 2 β2 2 γ2 4.23 and pK = 10.43. -
A 3-Fold Kernel Approach for Characterizing Late Onset Alzheimer’S Disease
bioRxiv preprint doi: https://doi.org/10.1101/397760; this version posted August 22, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. A 3-fold kernel approach for characterizing Late Onset Alzheimer’s Disease Margherita Squillarioa,*, Federico Tomasia, Veronica Tozzoa, Annalisa Barlaa and Daniela Ubertib “for the Alzheimer’s Disease Neuroimaging Initiative**” aDIBRIS, University of Genoa, Via Dodecaneso 35, I-16146 Genova, Italy. E-mail address: {squillario, federico.tomasi, veronica.tozzo}@dibris.unige.it, [email protected] bDepartment of Molecular and Translational Medicine, University of Brescia, Viale Europa 11, 25123, Brescia, Italy. E-mail address: [email protected] * Corresponding author and Lead Contact. Tel: +39-010-353-6707; Fax: +39-010-353- 6699. ** Data used in preparation of this article were obtained from the Alzheimer’s Disease Neuroimaging Initiative (ADNI) database (adni.loni.usc.edu). As such, the investigators within the ADNI contributed to the design and implementation of ADNI and/or provided data but did not participate in analysis or writing of this report. A complete listing of ADNI investigators can be found at: http://adni.loni.usc.edu/wp- content/uploads/how_to_apply/ADNI_Acknowledgement_List.pdf 1 bioRxiv preprint doi: https://doi.org/10.1101/397760; this version posted August 22, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. -
GABA Receptor Crosstalk the Inhibitory Neurotransmitter GABA Activates Both Ionotropic
RESEARCH HIGHLIGHTS IN BRIEF SYNAPTIC TRANSMISSION GABA receptor crosstalk The inhibitory neurotransmitter GABA activates both ionotropic type A GABA receptors (GABAARs) and metabotropic GABAB receptors (GABABRs). Two independent studies in rat brain slices now show that activation of postsynaptic GABABRs enhances signalling through extrasynaptic GABAARs. Activity-dependent changes in GABA concentration activate postsynaptic GABABRs leading to slow inhibition, whereas high-affinity GABAARs at extrasynaptic sites are activated tonically by ambient GABA. This tonic inhibitory tone has been implicated in synaptic integration, anxiety-related behaviours and seizure susceptibility. Tao et al. show that activation of postsynaptic GABABRs enhances GABAAR-mediated currents caused by exogenous GABA or the GABABR agonist baclofen in dentate gyrus granule cells (DGGCs) but not in CA1 pyramidal neurons or cortical layer 2/3 pyramidal neurons. Connelly et al. report similar crosstalk in thalamocortical neurons of the ventrobasal thalamus and cerebellar granule cells as well as in DGGCs. ORIGINAL RESEARCH PAPERS Tao, W. et al. Postsynaptic GABAB receptors enhance extrasynaptic GABAA receptor function in dentate gyrus granule cells. J. Neurosci. 33, 3738–3743 (2013) | Connelly, W. M. et al. GABAB receptors regulate extrasynaptic GABAA receptors. J. Neurosci. 33, 3780–3785 (2013) SIGNAL TRANSDUCTION JACOB reveals the origin of NMDAR signals Signalling through NMDA receptors (NMDARs) can trigger cell death or survival depending on whether activation of such receptors occurs at extrasynaptic or synaptic sites, respectively. It is unclear how these opposing signals are communicated to and discriminated by the nucleus, but the authors of this study show that differential phosphorylation of JACOB relays the origin of the NMDAR signal to the nucleus. -
A Review of Glutamate Receptors I: Current Understanding of Their Biology
J Toxicol Pathol 2008; 21: 25–51 Review A Review of Glutamate Receptors I: Current Understanding of Their Biology Colin G. Rousseaux1 1Department of Pathology and Laboratory Medicine, Faculty of Medicine, University of Ottawa, Ottawa, Ontario, Canada Abstract: Seventy years ago it was discovered that glutamate is abundant in the brain and that it plays a central role in brain metabolism. However, it took the scientific community a long time to realize that glutamate also acts as a neurotransmitter. Glutamate is an amino acid and brain tissue contains as much as 5 – 15 mM glutamate per kg depending on the region, which is more than of any other amino acid. The main motivation for the ongoing research on glutamate is due to the role of glutamate in the signal transduction in the nervous systems of apparently all complex living organisms, including man. Glutamate is considered to be the major mediator of excitatory signals in the mammalian central nervous system and is involved in most aspects of normal brain function including cognition, memory and learning. In this review, the basic biology of the excitatory amino acids glutamate, glutamate receptors, GABA, and glycine will first be explored. In the second part of this review, the known pathophysiology and pathology will be described. (J Toxicol Pathol 2008; 21: 25–51) Key words: glutamate, glycine, GABA, glutamate receptors, ionotropic, metabotropic, NMDA, AMPA, review Introduction and Overview glycine), peptides (vasopressin, somatostatin, neurotensin, etc.), and monoamines (norepinephrine, dopamine and In the first decades of the 20th century, research into the serotonin) plus acetylcholine. chemical mediation of the “autonomous” (autonomic) Glutamatergic synaptic transmission in the mammalian nervous system (ANS) was an area that received much central nervous system (CNS) was slowly established over a research activity. -
Multi-Functionality of Proteins Involved in GPCR and G Protein Signaling: Making Sense of Structure–Function Continuum with In
Cellular and Molecular Life Sciences (2019) 76:4461–4492 https://doi.org/10.1007/s00018-019-03276-1 Cellular andMolecular Life Sciences REVIEW Multi‑functionality of proteins involved in GPCR and G protein signaling: making sense of structure–function continuum with intrinsic disorder‑based proteoforms Alexander V. Fonin1 · April L. Darling2 · Irina M. Kuznetsova1 · Konstantin K. Turoverov1,3 · Vladimir N. Uversky2,4 Received: 5 August 2019 / Revised: 5 August 2019 / Accepted: 12 August 2019 / Published online: 19 August 2019 © Springer Nature Switzerland AG 2019 Abstract GPCR–G protein signaling system recognizes a multitude of extracellular ligands and triggers a variety of intracellular signal- ing cascades in response. In humans, this system includes more than 800 various GPCRs and a large set of heterotrimeric G proteins. Complexity of this system goes far beyond a multitude of pair-wise ligand–GPCR and GPCR–G protein interactions. In fact, one GPCR can recognize more than one extracellular signal and interact with more than one G protein. Furthermore, one ligand can activate more than one GPCR, and multiple GPCRs can couple to the same G protein. This defnes an intricate multifunctionality of this important signaling system. Here, we show that the multifunctionality of GPCR–G protein system represents an illustrative example of the protein structure–function continuum, where structures of the involved proteins represent a complex mosaic of diferently folded regions (foldons, non-foldons, unfoldons, semi-foldons, and inducible foldons). The functionality of resulting highly dynamic conformational ensembles is fne-tuned by various post-translational modifcations and alternative splicing, and such ensembles can undergo dramatic changes at interaction with their specifc partners. -
A NMDA-Receptor Calcium Influx Assay Sensitive to Stimulation By
www.nature.com/scientificreports OPEN A NMDA-receptor calcium infux assay sensitive to stimulation by glutamate and glycine/D-serine Received: 11 May 2017 Hongqiu Guo1, L. Miguel Camargo 1, Fred Yeboah1, Mary Ellen Digan1, Honglin Niu1, Yue Accepted: 1 September 2017 Pan2, Stephan Reiling1, Gilberto Soler-Llavina3, Wilhelm A. Weihofen1, Hao-Ran Wang1, Y. Published: xx xx xxxx Gopi Shanker3, Travis Stams1 & Anke Bill1 N-methyl-D-aspartate-receptors (NMDARs) are ionotropic glutamate receptors that function in synaptic transmission, plasticity and cognition. Malfunction of NMDARs has been implicated in a variety of nervous system disorders, making them attractive therapeutic targets. Overexpression of functional NMDAR in non-neuronal cells results in cell death by excitotoxicity, hindering the development of cell- based assays for NMDAR drug discovery. Here we report a plate-based, high-throughput approach to study NMDAR function. Our assay enables the functional study of NMDARs with diferent subunit composition after activation by glycine/D-serine or glutamate and hence presents the frst plate-based, high throughput assay that allows for the measurement of NMDAR function in glycine/D-serine and/ or glutamate sensitive modes. This allows to investigate the efect of small molecule modulators on the activation of NMDARs at diferent concentrations or combinations of the co-ligands. The reported assay system faithfully replicates the pharmacology of the receptor in response to known agonists, antagonists, positive and negative allosteric modulators, as well as the receptor’s sensitivity to magnesium and zinc. We believe that the ability to study the biology of NMDARs rapidly and in large scale screens will enable the identifcation of novel therapeutics whose discovery has otherwise been hindered by the limitations of existing cell based approaches. -
Positive Allosteric Modulation of Indoleamine 2,3-Dioxygenase 1
Positive allosteric modulation of indoleamine 2,3- dioxygenase 1 restrains neuroinflammation Giada Mondanellia, Alice Colettib, Francesco Antonio Grecob, Maria Teresa Pallottaa, Ciriana Orabonaa, Alberta Iaconoa, Maria Laura Belladonnaa, Elisa Albinia,b, Eleonora Panfilia, Francesca Fallarinoa, Marco Gargaroa, Giorgia Mannia, Davide Matinoa, Agostinho Carvalhoc,d, Cristina Cunhac,d, Patricia Macielc,d, Massimiliano Di Filippoe, Lorenzo Gaetanie, Roberta Bianchia, Carmine Vaccaa, Ioana Maria Iamandiia, Elisa Proiettia, Francesca Bosciaf, Lucio Annunziatof,1, Maikel Peppelenboschg, Paolo Puccettia, Paolo Calabresie,2, Antonio Macchiarulob,3, Laura Santambrogioh,i,j,3, Claudia Volpia,3,4, and Ursula Grohmanna,k,3,4 aDepartment of Experimental Medicine, University of Perugia, 06100 Perugia, Italy; bDepartment of Pharmaceutical Sciences, University of Perugia, 06100 Perugia, Italy; cLife and Health Sciences Research Institute (ICVS), School of Medicine, University of Minho, 4710-057 Braga, Portugal; dICVS/3B’s–PT Government Associate Laboratory, 4704-553 Braga/Guimarães, Portugal; eDepartment of Medicine, University of Perugia, 06100 Perugia, Italy; fDepartment of Neuroscience, University of Naples Federico II, 80131 Naples, Italy; gDepartment of Gastroenterology and Hepatology, Erasmus Medical Centre–University Medical Centre Rotterdam, 3015 GD Rotterdam, The Netherlands; hEnglander Institute of Precision Medicine, Weill Cornell Medicine, New York, NY 10065; iDepartment of Radiation Oncology, Weill Cornell Medicine, New York, NY 10065; jDepartment of Physiology and Biophysics, Weill Cornell Medicine, New York, NY 10065; and kDepartment of Pathology, Albert Einstein College of Medicine, New York, NY 10461 Edited by Lawrence Steinman, Stanford University School of Medicine, Stanford, CA, and approved January 16, 2020 (received for review October 21, 2019) L-tryptophan (Trp), an essential amino acid for mammals, is the or necessary to contain the pathology (20). -
Allosteric Modulators of G Protein-Coupled Dopamine and Serotonin Receptors: a New Class of Atypical Antipsychotics
pharmaceuticals Review Allosteric Modulators of G Protein-Coupled Dopamine and Serotonin Receptors: A New Class of Atypical Antipsychotics Irene Fasciani 1, Francesco Petragnano 1, Gabriella Aloisi 1, Francesco Marampon 2, Marco Carli 3 , Marco Scarselli 3, Roberto Maggio 1,* and Mario Rossi 4 1 Department of Biotechnological and Applied Clinical Sciences, University of l’Aquila, 67100 L’Aquila, Italy; [email protected] (I.F.); [email protected] (F.P.); [email protected] (G.A.) 2 Department of Radiotherapy, “Sapienza” University of Rome, Policlinico Umberto I, 00161 Rome, Italy; [email protected] 3 Department of Translational Research and New Technology in Medicine and Surgery, University of Pisa, 56126 Pisa, Italy; [email protected] (M.C.); [email protected] (M.S.) 4 Institute of Molecular Cell and Systems Biology, University of Glasgow, Glasgow G12 8QQ, UK; [email protected] * Correspondence: [email protected] Received: 26 September 2020; Accepted: 11 November 2020; Published: 14 November 2020 Abstract: Schizophrenia was first described by Emil Krapelin in the 19th century as one of the major mental illnesses causing disability worldwide. Since the introduction of chlorpromazine in 1952, strategies aimed at modifying the activity of dopamine receptors have played a major role for the treatment of schizophrenia. The introduction of atypical antipsychotics with clozapine broadened the range of potential targets for the treatment of this psychiatric disease, as they also modify the activity of the serotoninergic receptors. Interestingly, all marketed drugs for schizophrenia bind to the orthosteric binding pocket of the receptor as competitive antagonists or partial agonists. -
Pharmacology of a Novel Biased Allosteric Modulator for NMDA Receptors
Pharmacology of a Novel Biased Allosteric Modulator for NMDA Receptors Lina Kwapisz Thesis submitted to the faculty of the Virginia Polytechnic Institute and State University in partial fulfillment of the requirements for the degree of Master of Science In Biomedical and Veterinary Sciences B. Costa, Co-Chair B. Klein M. Theus C. Reilly April 28th of 2021 Blacksburg, VA Keywords: NMDAR, allosteric modulation, CNS4, glutamate Pharmacology of a Novel Biased Allosteric Modulator for NMDA Receptors Lina Kwapisz ABSTRACT NMDA glutamate receptor is a ligand-gated ion channel that mediates a major component of excitatory neurotransmission in the central nervous system (CNS). NMDA receptors are activated by simultaneous binding of two different agonists, glutamate and glycine/ D- serine1. With aging, glutamate concentration gets altered, giving rise to glutamate toxicity that contributes to age-related pathologies like Parkinson’s disease, Alzheimer’s disease, amyotrophic lateral sclerosis, and dementia88,95. Some treatments for these conditions include NMDA receptor blockers like memantine130. However, when completely blocking the receptors, there is a restriction of the receptor’s normal physiological function59. A different approach to regulate NMDAR receptors is thorough allosteric modulators that could allow cell type or circuit-specific modulation, due to widely distributed GluN2 expression, without global NMDAR overactivation59,65,122. In one study, we hypothesized that the compound CNS4 selectively modulates NMDA diheteromeric receptors (GluN2A, GluN2B, GuN2C, and GluN2C) based on (three) different glutamate concentrations. Electrophysiological recordings carried out on recombinant NMDA receptors expressed in xenopus oocytes revealed that 30μM and 100μM of CNS4 potentiated ionic currents for the GluN2C and GluN2D subunits with 0.3μM Glu/100μM Gly. -
Allosteric Modulation of GABAA Receptors by an Anilino Enaminone in an Olfactory Center of the Mouse Brain
Pharmaceuticals 2014, 7, 1069-1090; doi:10.3390/ph7121069 OPEN ACCESS pharmaceuticals ISSN 1424-8247 www.mdpi.com/journal/pharmaceuticals Review Allosteric Modulation of GABAA Receptors by an Anilino Enaminone in an Olfactory Center of the Mouse Brain Thomas Heinbockel 1,*, Ze-Jun Wang 1 and Patrice L. Jackson-Ayotunde 2 1 Department of Anatomy, College of Medicine, Howard University, Washington, DC 20059, USA; E-Mail: [email protected] 2 Department of Pharmaceutical Sciences, University of Maryland Eastern Shore, Princess Anne, MD 21853, USA; E-Mail: [email protected] * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +1-202-806-9873. External Editor: Marlene A. Jacobson Received: 15 April 2014; in revised form: 24 November 2014 / Accepted: 4 December 2014 / Published: 17 December 2014 Abstract: In an ongoing effort to identify novel drugs that can be used as neurotherapeutic compounds, we have focused on anilino enaminones as potential anticonvulsant agents. Enaminones are organic compounds containing a conjugated system of an amine, an alkene and a ketone. Here, we review the effects of a small library of anilino enaminones on neuronal activity. Our experimental approach employs an olfactory bulb brain slice preparation using whole-cell patch-clamp recording from mitral cells in the main olfactory bulb. The main olfactory bulb is a key integrative center in the olfactory pathway. Mitral cells are the principal output neurons of the main olfactory bulb, receiving olfactory receptor neuron input at their dendrites within glomeruli, and projecting glutamatergic axons through the lateral olfactory tract to the olfactory cortex. The compounds tested are known to be effective in attenuating pentylenetetrazol (PTZ) induced convulsions in rodent models. -
A Physiological Role for GABAA Receptor Desensitization – Induction of Long-Term Potentiation at Inhibitory Synapses
bioRxiv preprint doi: https://doi.org/10.1101/2020.06.02.128900; this version posted June 5, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. A physiological role for GABAA receptor desensitization – induction of long-term potentiation at inhibitory synapses Martin Field, Philip Thomas & Trevor G Smart Department of Neuroscience, Physiology & Pharmacology UCL Gower Street London WC1E 6BT bioRxiv preprint doi: https://doi.org/10.1101/2020.06.02.128900; this version posted June 5, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract GABAA receptors (GABAARs) are pentameric ligand-gated ion channels distributed throughout the brain where they mediate synaptic and tonic inhibition. Following activation, these receptors undergo desensitization which involves entry into long-lived agonist-bound closed states. Although the kinetic effects of this state are recognised and its structural basis has been uncovered, the physiological impact of desensitization on inhibitory neurotransmission remains unknown. Here we describe an enduring new form of long-term potentiation at inhibitory synapses that elevates synaptic current amplitude for 24 hrs following desensitization of GABAARs in response to prolonged agonist exposure or allosteric modulation. Using receptor mutants and allosteric modulators we demonstrate that desensitization of GABAARs facilitates their phosphorylation by PKC, which increases the number of receptors at inhibitory synapses. These observations provide a new physiological relevance to the desensitized state of GABAARs, acting as a signal to regulate the efficacy of inhibitory synapses during prolonged periods of inhibitory neurotransmission.