Supplemental Citations

Alcolado, P. M., R. Claro-Madruga, and R. Estrada. 2000. Status and prospective of coral reef

management in Cuba. Coral Reef Status Report for Cuba, GCRMN. Accessed 13 October

2013 from reefbase.org/pdf/%20GCRMN2000CUB.

Alcolado P. M., P. Garcia-Parrado, and D. Hernandez-Munoz. 2008. Composition and structure

of gorgonian communities of coral reefs in the Sabana-Camagüey Archipelago, Cuba:

Connectivity and Determinant Factors. Bol. Invemar. 37(1):11–29.

Alino, P. M., P. W. Sammarco, J. C. Coll. 1988. Studies of the feeding preferences of Chaetodon

melannotus (Pisces) for soft corals (Coelenterata; Octocorallia). Proc. Sixth Int. Coral Reef

Symp. Townsville 3:31–36.

Andrews, K., L. Nall, C. Jeffrey, S. Pittman, K. Banks, C. Beaver, and W. Jaap. 2005. The state

of coral reef ecosystems of Florida. p. 150–200 In The State of Coral Reef Ecosystems of the

United States and Pacific Freely Associated States. U.S. Dep. Commer., NOAA Natl. Ocean

Serv., NCCOS, Silver Spring, Md., 522 p.

Armando Sanchez, J., and H. Wirshing. 2005. A field key to the identification of tropical western

Atlantic zooxanthellate octocorals (Octocorallia: Cnidaria). Carib. J. Sci. 3:508–522.

Ata, A., R. G. Kerr, C. E. Moya, and R. S. Jacobs. 2003. Identification of anti-inflammatory

1

diterpenes from the marine gorgonian Pseudopterogorgia elisabethae. Tetrahedron 59:4215–

4222.

Bak, R. P. M. 1987. Effects of chronic oil pollution on a Caribbean coral reef. Mar. Pollut. Bull.

18:534–539.

Baker, D. M., K. Kim, J. P. Andras, and J. P. Sparks. 2011. Light-mediated 15N fractionation in

Caribbean gorgonian octocorals: implications for pollution monitoring. Coral Reefs 30:709–

717. doi: https://doi.org/10.1007/s00338-011-0759-x.

Ballantine, D. L., R. S. Appeldoorn, P. Yoshioka, E. Weil, R. Armstrong, J. R. Garcia, F. P.

Otero, C. Sherman, E. A. Hernandez-Delgado, A. Bruckner, and C. Lilyestrom. 2008.

Biology and ecology of Puerto Rican coral reefs. In B. M. Riegl and R. E. Dodge (Editors),

Coral Reefs of the USA, p. 375–406. Springer, Dania Beach, Fla.

Banks, K. W., B. M. Riegl, V. P. Richards, B. K. Walker, P. Kevin, K. P. Helmle, L. K. B.

Jordan, J. Phipps, M. S. Shivji, R. E. Spieler, and R. E. Dodge. 2008. The reef tract of

continental southeast Florida (Miami-Dade, Broward and Palm Beach counties, USA). In B.

M. Riegl and R. E. Dodge (Editors), Coral Reefs of the USA., p. 175–220. Springer, Dania,

Fla.

2

Bardales, A. T. 1981. Reproductive patterns of three species of octocorals (families Telestidae,

Briareidae, Plexauridae) in the vicinity of La Parguera, Puerto Rico. M.Sc. Thesis, Univ.

Puerto Rico at Mayaguez, Puerto Rico, 86 p.

Bayer, F. M. 1952. New western Atlantic records of octocorals (Coelenterata: Anthozoa), with

descriptions of three new species. J. Wash. Acad. Sci. 42(6):183–189.

______. 1959. Octocorals from Surinam and the adjacent coasts of South America. Stud.

Fauna Surinam and Guyanas 6:1–43.

______. 1964. The genus Corallium (Gorgonacea: Scleraxonia) in the western North Atlantic

Ocean. Bull. Mar. Sci. 14(3):465–478.

______and E. Deichmann. 1958. Two new plexaurid gorgonians from the Bahama Islands.

Bull. Mar. Sci. Gulf Carib. 8(3):224–235.

______and A. J. Weinheimer (Editors). 1974. Prostaglandins from Plexaura homomalla:

Ecology, Utilization, and Conservation of a Major Medical Marine Resource: A Symposium.

Studies in Tropical Oceanography No. 12, University of Miami Press, Coral Gables, FL. 165 p.

Behety, P. A. 1975. Nuevos reportes de gorgonaceos (Coelenterata) para Cuba. Academia de

Ciencias Serie Oceanologica No. 3, 9 p.

3

Beiring, E. A. 1997. Life history and reproductive success of a broadcast-spawning gorgonian

coral and implications for conservation biology. Dissertation Thesis (Ph.D.), SUNY-Buffalo,

Buffalo, NY, 137 p.

Bellwood, D., T. Hughes, C. Folke, R. Steneck, and J. Wilson. 2005. New paradigms for

supporting the resilience of marine ecosystems. Trends Ecol. Evol. 20:380–386.

Boller, M. L., T. D. Swain, and H. R. Lasker. 2002. Skeletal morphology and material properties

of a fragmenting gorgonian coral. Mar. Ecol. Prog. Ser. 228:131–141.

Brazeau, D. A., and C. D. Harvell. 1994. Genetic structure of local populations and divergence

between growth forms in a clonal invertebrate, the Caribbean octocoral Briareum

asbestinum. Mar. Biol. 119:53–60.

______and H. R. Lasker. 1988. Inter-and intraspecific variation in gorgonian colony

morphology: quantifying branching patterns in arborescent animals. Coral Reefs 7:139–143.

______and ______. 1989. The reproductive cycle and spawning in a Caribbean

gorgonian. Biol. Bull. 176:1–7.

______and ______. 1992. Growth rates and growth strategy in a clonal marine

invertebrate, the Caribbean octocoral Briareum asbestinum. Biol. Bull. 183:269–277.

4

Brinkhuis, V. 2009. Assessment of gorgonian transplantation techniques offshore southeast

Florida. M.Sc. Thesis, Nova Southeastern University Oceanographic Center, Dania Beach,

Fla., 96 p.

Bruckner, A. W. 2005. The importance of the marine ornamental reef fish trade in the wider

Caribbean. Rev. Biol. Trop. 53:127–137.

Cadena, N. J., C. Rey, M. Hernández-Hoyos, J. Sánchez, T. Darío, A. N. Stanislas, and J. A.

Sánchez. 2010. Linking local to global properties in branching modular networks: gorgonian

coral colonies. Mar. Biol. 157:1003–1010. (doi: https://doi.org/10.1007/s00227-009-1380-1).

Cairns, S. D. 2009. Influence of Frederick (Ted) M. Bayer on deep-water octocoral research.

Mar. Ecol. Prog. Ser. 397:7–10, doi: 10.3354/meps08066.

Cerrano, C., A. Arillo, F. Azzini, B. Calcinai, L. Castellano, C. Muti, L. Valisano, G. Zega, and

G. Bavestrello. 2005. Gorgonian population recovery after a mass mortality event. Aquat.

Conserv. Mar. Freshw. 15:147–157.

Chacón-Gómez, I. C., J. Reyes, and N. Santodomingo. 2012. Deep-water octocorals (Anthozoa:

Cnidaria) collected from the Colombian Caribbean during “Macrofauna Explorations” 1998–

2002. Boletín de Invest Mar. Costeras INVEMAR. 41(1):193–211.

Chamberlain, C. K. 1967. Some Octocorallia of Isla de Lobos, Veracruz, Mexico. Coastal Stud.

5

Inst., Louisiana State Univ., Baton Rouge, LA.

Chiappone, M., H. Dienes, D. W. Swanson, and S. L. Miller. 2003. Density and gorgonian host-

occupation patterns by flamingo tongue snails (Cyphoma gibbosum) in the Florida Keys.

Carib. J. Sci. 39(1):116–127.

______and K. M. Sullivan. 1997. Reef invertebrates of the Exuma Cays: Part 2 –

Octocorals. Bahamas J. Sci. 6:31–37.

Coffroth, M. A., T. L. Goulet, and S. R. Santos. 2001. Early ontogenic expression of specificity

in a cnidarian-algal symbiosis. Mar. Ecol. Prog. Ser. 222:85–96.

______and H. R. Lasker. 1998a. Larval paternity and male reproductive success of a

broadcast-spawning gorgonian, Plexaura kuna. Mar. Biol. 131:329–337.

______and ______. 1998b) Population structure of a clonal gorgonian coral: the

interplay between clonal reproduction and disturbance. Evolution 52(2):379–393.

______, ______, M. E. Diamond, J. A. Bruenn, and E. Bermingham. 1992. DNA

fingerprints of a gorgonian coral: a method for detecting clonal structure in a vegetative

species. Mar. Biol. 114:317–325.

______, C. L. Lewis, S. R. Santos, J. L. Weaver. 2006. Environmental populations of

6

symbiotic dinoflagellates in the genus Symbiodinium (Freudenthal) can initiate symbiosis

with reef cnidarians. Curr. Biol. 16:985–987.

Collier, C., R. E. Dodge, D. Gilliam, K. Gracie, L. Gregg, W. Jaap, M. Mastry, and N. Poulos.

2007. Rapid response and restoration for coral reef injuries in southeast Florida: Guidelines

and recommendations. Workshop Presentation. Fla. Dep. Environ. Prot. (FDEP) through an

agreement with the National Coral Reef Inst. (NCRI) at Nova Southeastern Univ.

______, R. Ruzicka, K. Banks, L. Barbieri, B. Beal, D. Bingham, and 21 additional authors.

2008. The State of Coral Reef Ecosystems of Southeast Florida. Paper presented at The State

of Coral Reef Ecosystems of the United States and Pacific Freely Associated States. U.S.

Dep. Commer., NOAA, Natl. Ocean Serv., NCCOS. Silver Spring, MD, 569 p.

Coma, R., and H. R. Lasker. 1997. Effects of spatial distribution and reproductive biology on in

situ fertilization rates of a broadcast-spawning invertebrate. Biol. Bull. 193:20–29.

______, E. Pola, M. Ribes, and M. Zabala. 2004. Long-term assessment of temperate

octocoral mortality patterns, protected vs. unprotected areas. Ecol. App. 14(5):1466–1478.

Correa, H., B. Haltli, C. Duque, and R. Kerr. 2013. Bacterial communities of the gorgonian

octocoral Pseudopterogorgia elisabethae. Micro Ecol. 66:972–985.

______, A. L. Valenzuela, L. F. Ospina, and C. Duque. 2009. Anti-inflammatory effects of

7

the gorgonian Pseudopterogorgia elisabethae collected at the Islands of Providencia and San

Andrés (SW Caribbean). J. Inflamm 6(5), doi:10.1186/1476-9255-6-5.

D’armas, H., D. Bermúdez, and A. Castera. 2004. Bioactividad de algunos octocorales de aguas

Venezolanas. Saber 16(1):19–25.

Dayan, N., A. Babik, T. Higgs, and H. Lasker. 2011. The harvest of marine-derived cosmetic

ingredients: A case study of Pseudopterogorgia elisabethae. Cosmetics and Toiletry

126(8):572–577.

de Putron, S. J., and J. S. Ryland. 2009. Effect of seawater temperature on reproductive

seasonality and fecundity of Pseudoplexaura porosa (Cnidaria: Octocorallia):latitudinal

variation in Caribbean gorgonian reproduction. Invert. Biol. 128:213–22,

doi: 10.1111/j.1744-7410.2009.00170.x.

Devictor, S. T., and S. L. Morton. 2010. Identification guide to the shallow water (0–200 m)

octocorals of the South Atlantic Bight. Zootaxa 2599:1–62.

Drohan, A. F., D. A. Thoney, and A. C. Baker. 2005. Synergistic effect of high temperature and

ultraviolet-B radiation on the gorgonian Eunicea tourneforti (Octocorallia: Alcyonacea:

Plexauridae). Bull. Mar. Sci. 77:257–266.

Dube, D., K. Kim, A. P. Alker, and C. D. Harvell. 2002. Size structure and geographic variation

8

in chemical resistance of sea fan corals Gorgonia ventalina to a fungal pathogen. Mar. Ecol.

Prog. Ser. 231:139–150.

Duque-Alarcón, A., L. Z. Santiago-Vázquez, and R. G. Kerr. 2012. A microbial community

analysis of the octocoral Eunicea fusca. Electr J. Biotech [online] 15(5):15.

Epifanio, R., L. F. Maia, J. R. Pawlik, and W. Fenical. 2007. Antipredatory secosterols from the

octocoral Pseudopterogorgia americana. Mar. Ecol. Prog. Ser. 329:307–31.

Espinosa, Y. O., L. Hernandez-Fernandez, and A. J. Capote. 2010. Structure and injuries of

octocoral communities (Octocorallia: Alcyonacea) of Ecological Reserve Siboney-Jutici,

Santiago de Cuba, Cuba. Rev. Biol. Trop. 58(4):1211–1221.

Etnoyer, P. J., H. H. Wirshing, J. A. Sánchez, and M. Solan. 2010. Rapid assessment of octocoral

diversity and habitat on Saba Bank, Netherlands Antilles. PloS One 5:351–370.

Fabricus, K. and P. Alderslade. 2001. Soft corals and sea fans. A comprehensive guide to the

shallow-water genera of the central-west Pacific, the Indian Ocean and the Red Sea.

Australian Inst. Mar. Sci., Townsville, 264 p.

Fabricius, K. E., A. Genin, and Y. Benayahu. 1995. Flow-dependent herbivory and growth in

zooxanthellae-free soft corals. Limnol Oceanogr. 40:1290–1301.

9

Fenical, W. 1987. Marine soft corals of the Genus Pseudopterogorgia: A resource for novel anti-

inflammatory diterpenoids. J. Nat Prod 50(6):1001–1008.

Florida Administrative Code and Florida Administrative Register 2010. Retrieved from Florida

Department of State:

flrules.org/gateway/RuleNo.asp?title=REPORTING%20REQUIREMENTS%20FOR%20TH

E%20MARINE%20FISHERIES%20INFORMATIONSYSTEM&ID=68E-5.002, Accessed

21 November 2014.

Florida Department of State, Florida Administrative Code and Florida Administrative Resister

2010. Florida marine life rule. Retrieved from:

flrules.org/gateway/ChapterHome.asp?Chapter=68B-42, Accessed 11 November 2014.

Gerhart, D. J. 1990. Fouling and gastropod predation: Consequences of grazing for a tropical

octocoral. Mar. Ecol. Prog. Ser. 62:103–108.

Gilliam, D. 2010. Southeast Florida Coral Reef Evaluation and Monitoring Project 2009 year 7

Final Report, Miami Beach, FL. 42 p.

Gittings, S. 2003. Pre-construction coral survey of the M/V Wellwood grounding site: April 23–

24, 2002. Marine Sanctuaries Conservation Series MSD-03-1. U.S. Department of

Commerce, National Oceanic and Atmospheric Administration, Marine Sanctuaries Division,

Silver Spring, MD, 16 p.

10

Gittings, S. R., T. J. Bright, and D. K. Hagman. 1993. The M/V Wellwood and other large vessel

groundings: coral reef damage and recovery. p. 174–180 In Global aspects of coral reefs:

health, hazards, and history. Rosenstiel School of Marine and Atmospheric Science,

University of Miami, Miami.

______, ______, and B. S. Holland. 1990. Five years of coral recovery following a

freighter grounding in the Florida Keys. p. 89–105 In 10th Annual Scientific Diving

Symposium of the American Academy of Underwater Sciences: Diving for Science 1990. St.

Petersburg, Fla.

Goenaga, C. 1991. The state of coral reefs in the wider Caribbean. Interciencia 16(1):12–20.

Goffredo, S., and H. R. Lasker. 2006. Modular growth of a gorgonian coral can generate

predictable patterns of colony growth. J. Exp. Mar. Biol. Ecol. 336:221–229.

Goldberg, W. M., and Y. Benayahu. 1987. Spicule formation in the gorgonian coral

Pseudoplexaura flagellosa. 1: Demonstration of intracellular and extracellular growth and the

effect of ruthenium red during decalcification. Bull. Mar. Sci. 40(2):287–303.

Gonzales-Brito, P. 1970. Una lista de los octocorales de Puerto Rico. Carib. J. Sci. 10:63–69.

Gorgonian and sponges for seahorse tank? 2006) Retrieved from Reef Central Online

11

Community: reefcentral.com/forums/showthread.php?t=784736.

Goulet, T. A., and M. A. Coffroth. 1997. A within colony comparison of zooxanthella genotypes

in the Caribbean gorgonian Plexaura kuna. Proc. Eighth Int. Coral Reef Symp. Panama

2:1331–1334.

______and ______. 2003. Stability of an octocoral-algal symbiosis over time and

space. Mar. Ecol. Prog. Ser. 250:117–124.

______and ______. 2004a. Genetic composition of zooxanthellae between and

within colonies of the octocoral Plexaura kuna based on small subunit rDNA and multilocus

DNA fingerprinting. Mar. Biol. 142:233–239.

______and ______. 2004b. The genetic identity of dinoflagellate symbionts in

Caribbean octocorals. Coral Reefs 23:465–472, doi: 10.1007/s00338-004-0408-8.

______, C. Simmons, and D. Goulet. 2008. Worldwide biogeography of Symbiodinium in

tropical octocorals. Mar. Ecol. Prog. Ser. 355:45–58, doi: 10.3354/meps07214.

Grigg, R. W. 1972. Orientation and growth form of sea fans. Limnol Oceanogr. 17:185–192.

Guisan, A., and N. E. Zimmermann. 2000. Predictive habitat distribution models in ecology.

Ecol. Model 135:147–186, doi: 10.1016/S0304-3800(00)00354-9.

12

Gutierrez-Rodriguez, C., M. S. Barbeitos, J. A. Sanchez, and H. R. Lasker. 2009.

Phylogeography and morphological variation of the branching octocoral Pseudopterogorgia

elisabethae. Mol. Phylogenetics Evol. 50:1–15.

______and H. R. Lasker. 2004. Reproductive biology, development, and planula behavior

in the Caribbean gorgonian Pseudopterogorgia elisabethae. Invert. Biol. 123:54–67.

Hart, S. P., and M. J. Keough. 2009. Does size predict demographic fate? Modular demography

and constraints on growth determine response to decreases in size. Ecology 90:1670–1678.

Henry, L. A., and M. Hart. 2005. Regeneration from injury and resource allocation in sponges

and corals-a review. Int. Rev. Hydrobiol. 90:125–158.

Hernández, L. F., and P. M. Alcolado. 2007. Estructura de la comunidad de octocorales de una

zona propuesta como área protegida en Cayo Coco, Cuba. Rev. Invest. Mar. 28(3):209–216.

Hernandez-Delgado, E. A., L. Alicea-Rodriguez, C. G. Toledo, and A. M. Sabat. 2000. Baseline

characterization of coral reefs and fish communities within the proposed Culebra Island

marine fishery reserve, Puerto Rico. Proc. Gulf Carib. Fish Inst. 51:537–555.

Hernández-Muñoz, D., P. M. Alcolado, and M. Hernandez-Gonzalez. 2008. Effects of a

submarine discharge of urban waste on octocoral (Octocorallia: Alcyonacea) communities in

13

Cuba]. Rev. Biol. Trop. 56:65–75.

Hinman, J. 1973. Studies on experimental harvesting and regrowth of Plexaura homomalla in

Grand Cayman waters. Paper presented at the Offshore Technology Conference.

Hudson, J. H., and R. Diaz. 1988. Damage survey and restoration of M/V Wellwood grounding

site, Molasses Reef, Key Largo National Marine Sanctuary, Florida. Proc. Sixth Int. Coral

Reef Symp. Townsville 2:231–236.

Hudson, J. H., and E. C. Franklin. 2006. Coral reef restoration of a storm-disturbed vessel

grounding site in the Florida Keys National Marine Sanctuary, USA. Proc. Tenth Int. Coral

Reef Symp. Okinawa 2:1631–1636.

Hunt, L. R., S. M. Smith, K. R. Downum, and L. D. Mydlarz. 2012. Microbial regulation in

gorgonian corals. Marine Drugs 10(6):1225–1243.

Jaap, W. C., A. Szmant, K. Jaap, J. Dupont, R. Clarke, P. Somerfield, J. S. Ault, J. Bohnsack, S.

G. Kellison, and G. T. Kellison. 2008. A perspective on the biology of Florida Keys coral

reefs. In B. M. Riegl and R. E. Dodge (Editors), Coral Reefs of the USA. Springer, p. 75–

125, Dania, Fla.

Jaap, W. C., and J. L. Wheaton. 1977. Unpublished Report to the National Park Service on coral

research in Biscayne National Monument. Cited In Dupont J, Jaap W, Hallock P 2008) A

14

retrospective analysis and comparative study of stony coral assemblages in Biscayne

National Park, FL (1977–2000). Carib. J. Sci. 44:334–344.

Jackson, J. B., and T. P. Hughes. 1985. Adaptive strategies of coral-reef invertebrates. Amer. Sci.

73:265–274.

Jamison, J. L., and H. R. Lasker. 2008. Identification of octocoral recruits using microsatellite

primers: Relationships between recruitment and adult distribution of Pseudopterogorgia sp.

Limnol Oceanogr. 53:1963–1972.

Jeyasuria, P., and J. C. Lewis. 1987. Mechanical properties of the axial skeleton in gorgonians.

Coral Reefs 5:213–219.

Jolles, A. E., P. Sullivan, A. P. Alker, and C. D. Harvell. 2002. Disease transmission of

aspergillosis in sea fans: inferring process from spatial pattern. Ecology 83:2373–2378.

Jones, J. A. 1977. Morphology and development of southeastern Florida patch reefs. Proc. Third Int.

Coral Reef Symp. Miami 2:231–235.

Jordán, E. 1979. An analysis of gorgonian community in reef calcareous platform of the

Caribbean coast of Mexico. An Cent Cien Mar. Limnol UNAM 61:87–96.

______. 2002. Gorgonian distribution patterns in coral reef environments of the Gulf of

15

Mexico: evidence of sporadic ecological connectivity? Coral Reefs 21:205–215.

______, M. Moreno, and E. Martin. 1981. Community structure of coral reefs in the Mexican

Caribbean. Proc. Fourth Int. Coral Reef Symp. Manila 2:303–308.

______and R. S. Nugent. 1978. Evaluacion poblacional de Plexaura homomalla (Esper) en

la costa noreste de la Peninsula de Yucatan, (Octocorallia) [Mexico]. Paper presented at the

Anales Del Centro de Ciencias del Mar. y Limnología.

Kai, S., and K. Sakai. 2008. Effect of colony size and age on resource allocation between growth

and reproduction in the corals Goniastrea aspera and Favites chinensis. Mar. Ecol. Prog. Ser.

354:133–139.

Kim, E. A. B., H. R. Lasker, M. A. Coffroth, and K. Kim. 2004. Morphological and genetic

variation across reef habitats in a broadcast-spawning gorgonian coral. Hydrobiologia

530/531:423–432.

Kim, K., C. D. Harvell, P. D. Kim, G. W. Smith, and S. M. Merkel. 2000. Fungal disease

resistance of Caribbean sea fan corals (Gorgonia sp.). Mar. Biol. 136:259–267.

______, A. P. Alker, and C. D. Harvell. 2000. Chemical resistance of gorgonian corals

against fungal infections. Mar. Biol. 137:393–401.

16

______and H. R. Lasker. 1997. Flow-mediated resource competition in the suspension

feeding gorgonian Plexaura homomalla (Esper). J. Exp. Mar. Biol. Ecol. 215:49–64.

Kinzie, R. A. 1974a. Experimental infection of aposymbiotic gorgonian polyps with

zooxanthellae. J. Exp. Mar. Biol. Ecol. 15:335–345.

______. 1974b. Plexaura homomalla: the biology of a harvestable marine resource. In F. M.

Bayer and A. J. Weinheimer (Editors), Prostaglandins from Plexaura homomalla: ecology,

utilization, and conservation of a major medical marine resource: a symposium, p. 22–38. Stud.

Trop. Oceanography No. 12, Univ. Miami Press, Coral Gables, Fla.

Kirk, N. L., J. P. Andras, C. D. Harvell, S. R. Santos, and M. A. Coffroth. 2009. Population

structure of Symbiodinium associated with the common sea fan, Gorgonia ventalina, in the

Florida Keys across distance, depth, and time. Mar. Biol. 156:1609–1623.

Kirk, N. L., J. Ward, D. Harvell, and M. A. Coffroth. 2005. Stable Symbiodinium composition in

the sea fan Gorgonia ventalina during temperature and disease stress. Biol. Bull. 209:227–

234.

Kühlmann, D. H. H. 1988. The sensitivity of coral reefs to environmental pollution. Ambio

17(1):13–21.

LaJeunesse, T. 2002. Diversity and community structure of symbiotic dinoflagellates from

17

Caribbean coral reefs. Mar. Biol. 141:387–400.

Lang da Silveira, F., and T. Van't Hof . 1977. Regeneration in the gorgonian Plexaura flexuosa

(Cnidaria, Octocorallia). Bijdr Dierk 47:99–108.

Lasker, H. R. 1990. Clonal propagation and population dynamics of a gorgonian coral. Ecology

71:1578–1589.

______. 1991. Population growth of a gorgonian coral: equilibrium and non-equilibrium

sensitivity to changes in life history variables. Oecologia 86:503–509.

______. 2006. High fertilization success in a surface-brooding Caribbean gorgonian. Biol.

Bull. 210:10–17.

______, M. L. Boller, J. Castanaro, and J. A. Sanchez. 2003. Determinate growth and

modularity in a gorgonian octocoral. Biol. Bull. 205:319–330.

______, D. A. Brazeau, J. Calderon, M. A. Coffroth, R. Coma, and K. Kim. 1996. In situ

rates of fertilization among broadcast spawning gorgonian corals. Biol. Bull. 190:45–55.

______and ______. 1985. Determinate growth and modularity in a gorgonian

octocoral. Proc. Fifth Int. Coral Reef Congr Tahiti 205:319–330.

18

______, ______, Fitzgerald LM 1988. Foraging patterns of Cyphoma gibbosum on

octocorals: the roles of host choice and feeding preference. Biol. Bull. 174:254–266.

______and ______. 1999. Responses of clonal reef taxa to environmental change.

Amer. Zool. 39(1):92–103.

______, M. Gottfried, and M. A. Coffroth. 1983. Effects of depth on the feeding capabilities

of two octocorals. Mar. Biol. 73:73–78.

______, C. Gutierrez-Rodriguez, K. Bala, A. Hannes, and J. P. Bilewitch. 2008. Male

reproductive success during spawning events of the octocoral Pseudopterogorgia

elisabethae. Mar. Ecol. Prog. Ser. 367:153–161.

______, ______, and M. A. Coffroth. 1996. Reproductive and genetic variation among

Caribbean gorgonians: the differentiation of Plexaura kuna, new species. Bull. Mar. Sci.

58:277–288.

______, ______, and ______. 1998. Production, settlement and survival of

plexaurid gorgonian recruits. Mar. Ecol. Prog. Ser. 162:111–123.

Lewis, C. L., and M. A. Coffroth. 2004. The acquisition of exogenous algal symbionts by an

octocoral after bleaching. Science 304:1490–1492.

19

Lewis, J. B. 1982. Feeding behaviour and feeding ecology of the Octocorallia (Coelenterata:

Anthozoa). J. Zool. 196:371–384.

______and E. E. Post. 1982. Respiration and energetics in West Indian Gorgonacea

(Anthozoa, Octocorallia). Comp Biochem Physiol Part A Physiol 71(3):457–459.

Locke, J. M., J. P. Bilewitch, and K. A. Coates. 2013. Scleractinia, Octocorallia and Antipatharia

of Bermuda’s reefs and deep-water coral communities: a taxonomic perspective including

new records. p. 189–200 In Coral Reefs of the United Kingdom Overseas Territories.

Springer, NY.

Lutz, S. J., and R. N. Ginsberg. 2007. State of deep coral ecosystems in the Caribbean region:

Puerto Rico and the U.S. Virgin Islands. In The State of Deep Coral Ecosystems of the

United States, p. 307–365. NOAA Technical Memorandum CRCP-3, Silver Spring, Md.

Mayer, A., P. B. Jacobson, W. Fenical, R. S. Jacobs, and K. B. Glaser. 1998. Pharmacological

characterization of the pseudopterosins: Novel anti-inflammatory natural products isolated

from the Caribbean soft coral, Pseudopterogorgia elisabethae. Life Sciences 62:PL401–

PL407.

McLean, E. L., and P. M. Yoshioka. 2007. Associations and interactions between gorgonians and

sponges. Porifera Research: Biodiversity, Innovation, and Sustainability 443–448.

20

______and ______. 2008. Substratum effects on the growth and survivorship of the

sponge Desmapsamma anchorata. Carib. J. Sci. 44(1):83–89.

Menzel, L. P., C. H. Bigger, and B. Stein. 2012. Ultrastructure of Swiftia exserta, a gorgonian

octocoral from the western Atlantic. Microscopy Microanalysis 18(S2):80–81.

Mescher, K., and A. Sturgess. 2009. Coral reef recovery from hurricane damage and implications

of coral reeds for future medical discoveries. Epistimi:27–30.

Meszaros, A., and C. Bigger. 1999. Qualitative and quantitative study of wound healing

processes in the coelenterate, Plexaurella fusifera: Spatial, temporal, and environmental

(light attenuation) influences. J. Invert. Paleont. 73(3):321–331.

Miller, M. W. (Editor). 2003. Status of reef resources of Navassa Island: Cruise report Nov 2002.

NOAA Tech Mem NMFS-SEFSC-501, 119 p.

______and J. Barimo. 2001. Assessment of juvenile coral populations at two reef

restoration sites in the Florida Keys National Marine Sanctuary: Indicators of success? Bull.

Mar. Sci. 69:395–405.

Murdoch, G. R. 1978. Digestion, assimilation, and transport of food in the gastrovascular cavity

of a gorgonian octocoral (Cnidaria: Anthozoa). Bull. Mar. Sci. 28(2):354–362.

21

Mydlarz, L. D., R. S. Jacobs, J. Boehnlein, and R. G. Kerr. 2003. Pseudopterosin biosynthesis in

Symbiodinium sp., the dinoflagellate symbiont of Pseudopterogorgia elisabethae. Chem

Biol. 10(11):1051–1056.

O'Neal, W., and J. R. Pawlik. 2002. A reappraisal of the chemical and physical defenses of

Caribbean gorgonian corals against predatory fishes. Mar. Ecol. Prog. Ser. 240:117–126.

Obeso, J. R. 1993. Does defoliation affect reproductive output in herbaceous perennials and

woody plants in different ways? Func. Ecol. 7(2):150–155.

Olivera, E. Y., L. Hernandez-Fernandez, and C. A. Jover. 2010. Structure and injuries of

octocoral communities (Octocorallia: Alcyonacea) of Ecological Reserve Siboney-Juticí,

Santiago de Cuba, Cuba. Rev. Biol. Trop. 58(4):1211–1221.

Page, C. A., and H. R. Lasker. 2012. Effects of tissue loss, age and size on fecundity in the

octocoral Pseudopterogorgia elisabethae. J. Exp. Mar. Biol. Ecol. 434–435:47–52, doi:

10.1016/j.jembe.2012.07.022.

Pakes, M., and R. Woollacott. 2008. Reproduction of the gorgonian Plexaura flexuosa in

Bermuda. J. Exp. Mar. Biol. Ecol. 357:121–127.

Paul, V. J., R. W. Thacker, K. Banks, and S. Golubic. 2005. Benthic cyanobacterial bloom

impacts the reefs of South Florida (Broward County, USA). Coral Reefs 24:693–697.

22

Pérez, C. D., B. Neves, and D. H. R. Oliveira. 2011. New records of octocorals(Cnidaria:

Anthozoa) from the Brazilian coast. Aquat. Biol. 13(3):203–214.

Peters, E. C. 1984. A survey of cellular reactions to environmental and disease in Caribbean

scleractinian corals. Helg Meers 37:113–137.

______. 1993. Diseases of other invertebrate phyla: Porifera, Cnidaria, Ctenophora, Annelida,

Echinodermata. p. 393–449 In Pathobiology of Marine and Estuarine Organisms. Couch JA,

Fournie JW (Eds.), CRC Press, Boca Raton, FL.

Petes, L. E., C. D. Harvell, E. C. Peters, M. A. H. Webb, and K. M. Mullen. 2003. Pathogens

compromise reproduction and induce melanization in Caribbean sea fans. Mar. Ecol. Prog.

Ser. 264:167–171.

Pfennig, D. W. 2013. Inviable immigrants drive diversification in the sea. Proc. Natl. Acad. Sci.

110:3713–3714.

Poland, D. M., J. M. Mansfield, A. R. Hannes, C. L. Lewis, L. Fairbank, T. L. Shearer, S. J.

Connelly, N. L. Kirk, and M. A. Coffroth. 2013. Variation in Symbiodinium communities in

juvenile Briareum asbestinum (Cnidaria: Octocorallia) over temporal and spatial scales. Mar.

Ecol. Prog. Ser. 476:23–37.

23

Prada, C., and M. E. Hellberg. 2013. Long prereproductive selection and divergence by depth in

a Caribbean candelabrum coral. Proc. Natl Acad Sci. USA 110:3961–3966, doi:

10.1073/pnas.1208931110.

______, N. V. Schizas, and P. M. Yoshioka. 2008. Phenotypic plasticity or speciation? A

case from a clonal marine organism. BMC Evolutionary Biology 8:47 doi:10.1186/1471-

2148-8-47.

______, E. Weil, and P. M.Yoshioka. 2010. Octocoral bleaching during unusual thermal

stress. Coral Reefs 29:41–45. doi: 10.1007/s00338-009-0547-z.

Prada Montoya, C. A., and P. Yoshioka. 2007. Phenotypic and genetic variability in the

octocoral Plexaura flexuosa. M.Sc. Thesis, University of Puerto Rico-Mayaguez, Puerto

Rico, 75 p.

Randall, J. E. 1967. Food habits of reef fishes of the West Indies. Stud. Trop. Oceanogr. 5:665–847.

Rey-Villiers, N., and P. M. Alcolado. 2012. Variación de la talla de Eunicea flexuosa y Plexaura

kükenthali (Cnidaria: Octocorallia) en arrecifes coralinos cercanos a fuentes contaminantes

en La Habana, Cuba. Serie Oceanológica No. 11:91–102.

Rinkevich, B. 1996. Do reproduction and regeneration in damaged corals compete for energy

allocation? Marine ecology prog. ress series. Oldendorf 143:297–302.

24

Roussis, V., Z. Wu, W. Fenical, S. A. Strobel, G. D. Van Duyne, and J. Clardy. 1990. New anti-

inflammatory pseudopterosins from the marine octocoral Pseudopterogorgia elisabethae. J.

Org. Chem. 55(16):4916–4922.

Ruesink, J. L. and C. D. Harvell. 1990. Specialist predation on the Caribbean gorgonian

Plexaurella sp. by Cyphoma signatum (Gastropoda). Mar. Ecol. Prog. Ser. 65:265–272.

Sadovy, Y. 1992. A preliminary assessment of the export trade in marine aquarium organisms in

Puerto Rico. Proc. Seventh Int. Coral Reef Symp. Guam Vol. 2:1014–1022.

Sánchez, J. A. 2009. Systematics of the candelabrum gorgonian corals (Eunicea Lamouroux;

Plexauridae; Octocorallia; Cnidaria). Biol. J. Linn Soc 157:237–263.

______, C. Aguilar, D. Dorado, and N. Manrique. 2007. Phenotypic plasticity and

morphological integration in a marine modular invertebrate. BMC Evol. Biol. 7:122. (doi:

https://doi.org/10.1186/1471-2148-7-122).

Sánchez, J. A., J. M. Diaz, and S. Zea. 1997. Gorgonian communities in two contrasting

environments on oceanic atolls of the southwestern Caribbean. Bull. Mar. Sci. 61:453–465.

______and H. R. Lasker. 2003. Patterns of morphological integration in marine modular

organisms: supra-module organization in branching octocoral colonies. Proc. Royal Soc

Lond B 270:2039–2044.

25

______and ______. 2004. Do multi-branched colonial organisms exceed normal

growth after partial mortality? Proc. Biol. Sci. 271 Supp 3:S117–S120. (doi:

https://doi.org/10.1098/rsbl.2003.0108).

______, ______, E. G. Nepomuceno, J. D. Sanchez, and M. J. Woldenberg. 2004.

Branching and self-organization in marine modular colonial organisms: a model. Amer. Nat.

163:24–39. (doi: https://doi.org/10.1086/382139).

______, C. S. McFadden, S. C. France, and H. R. Lasker. 2003. Molecular phylogenetic

analyses of shallow-water Caribbean octocorals. Mar. Biol. 142:975–987.

______, S. Zea, and J. M. Diaz. 1998. Patterns of octocoral and black coral distribution in

the oceanic barrier reef-complex of Providencia Island, Southwestern Caribbean. Carib. J.

Sci. 34:250–264.

______, W. Zeng, V. R. Coluci, C. Simpson, and H. R. Lasker. 2003. How similar are

branching networks in nature? A view from the ocean: Caribbean gorgonian corals. J.

Theoret Biol. 222:135–138.

Santiago-Vázquez, L. Z., L. K. Ranzer, and R. G. Kerr. 2006. Comparison of two total RNA

extraction protocols using the marine gorgonian coral Pseudopterogorgia elisabethae and its

symbiont Symbiodinium sp. Electr J. Biotech 9(5):DOI: 10.2225/vol9-issue5-fulltext-15.

26

Santos Gutierrez-Rodriguez, S. R., H. R. Lasker, and M. A. Coffroth. 2003. Patterns of

Symbiodinium associations in the Caribbean gorgonian Pseudopterogorgia elisabethae: high

levels of genetic variability and population structure in symbiotic dinoflagellates of the

Bahamas. Mar. Biol. 143:111–120.

Schärer, M. T., and M. I. Nemeth. 2010. Mass mortality of gorgonians due to a Cyphoma

gibbosum (Linnaeus) population outbreak at Mona Island, Puerto Rico. Coral Reefs 29:533–

533.

Sebens, K. P., and K. Miles. 1988. Sweeper tentacles in a gorgonian octocoral: morphological

modifications for interference competition. Biol. Bull. 175:378–387.

Shaffer, C. F., C. Bigger, C. Beck, and A. Shope. 2001. Effect of salinity stress on wound

healing in Plexaurella fusifera, a soft coral. Faseb Journal 15(4):A692.

Simpson, A. 2009. Reproduction in octocorals (Subclass Octocorallia):a review of published

literature. Univ. Maine, Darling Mar. Center. Accessed 12 November 2014.

http://www.ucs.louisiana.edu/~scf4101/Bambooweb/repro_AS.html.

Smith, L. D., and T. P. Hughes. 1999. An experimental assessment of survival, re-attachment

and fecundity of coral fragments. J. Exp. Mar. Biol. Ecol. 235:147–164.

Somerfield, P. J., W. C. Jaap, K. R. Clarke, M. Callahan, K. Hackett, J. Porter, M. Lybolt, C.

27

Tsokos, and G. Yanev. 2008. Changes in coral reef communities among the Florida Keys,

1996–2003. Coral Reefs 27:951–965.

Sorokin, Y. I. 1991. Biomass, metabolic rates and feeding of some common reef zoantharians

and octocorals. Australian J. Mar. Freshwater Res 42:729–741, doi: 10.1071/MF9910729.

South Atlantic Fishery Management Council (SAFMC) 2014. Coral Fishery Management Plan

(FMP). Retrieved from safmc.net/Library/Ecosystem/CoralFMP_History.pdf Accessed 10

November 2014.

Sponaugle, S., and M. LaBarbera. 1991. Drag-induced deformation: a functional feeding strategy

in two species of gorgonians. J. Exp. Mar. Biol. Ecol. 148:121–134.

Sterrer, W. 1986. Marine Fauna and Flora of Bermuda. A systematic guide to the identification of

marine organisms. Wiley-Interscience, NY. 742 p.

Swain, T. D., K. Kim, and H. R. Lasker. 1997. Use of fluorescence microscopy in an assay of

sperm density for the gorgonian coral, Plexaura kuna. Proc. Eighth Int. Coral Reef Symp.

Panama 2:1341–1344.

Szmant, A. M. 1986. Reproductive ecology of Caribbean reef corals. Coral Reefs 5:43–53.

Toledo-Hernández, C., V. Gulis, C. P. Ruiz-Diaz, A. Sabat, and P. Bayman. 2012. When

28

aspergillosis hits the fan: disease transmission and fungal biomass in diseased versus healthy

sea fans Gorgonia ventalina. Fungal Ecol. 6(2):161–167.

U.S. Senate Natural Resources Committee 1998. Senate staff analysis and economic impact

statement. Bill CS/SB 1506, Retrieved from

archive.flsenate.gov/data/session/1998/Senate/bills/analysis/pdf/SB1506.nr.pdf. Accessed 18

November 2014.

Van Oppen Mieog, M. J. H., J. C. Sanchez, and K. E. Fabricius. 2005. Diversity of algal

endosymbionts (zooxanthellae) in octocorals: the roles of geography and host relationships.

Mol. Ecol. 14:2403–2417.

Velayutham, P., V. Ramadhas, and K. Venkataramanujam. 2003. Gorgonians as an indicator of

metal pollution. SDMRI Res Publ. 3:149–153.

______and K. Venkataramanujam. 2005. Conservation measures on gorgonian corals.

Proc. Natl Sem Reef Ecosystem Remediation 3:244–245.

Vreeland, H. V., and H. R. Lasker. 1989. Selective feeding of the polychaete Hermodice

carunculata Pallas on Caribbean gorgonians. J. Exp. Mar. Biol. Ecol. 129:265–277.

Wagner, D. E., P. Kramer, and R. Van Woesik. 2010. Species composition, habitat, and water

quality influence on coral bleaching in southern Florida. Mar. Ecol. Prog. Ser. 408:65–78.

29

Wahle, C. M. 1983. Regeneration of injuries among Jamaican gorgonians: the roles of colony

physiology and environment. Biol. Bull. 165:778–790.

Weinheimer, A., and R. Spraggins. 1969. The occurrence of two new prostaglandin derivatives

(15-epi-PGA2) and its acetate, methyl ester) in the gorgonian Plexaura homomalla.

Tetrahedron Letters 10(59):5185–5188.

West, J. M. 1997. Plasticity in the sclerites of a gorgonian coral: tests of water motion, light

level, and damage cues. Biol. Bull. 192(2):279–289.

______, C. D. Harvell, and A. M. Walls. 1993. Morphological plasticity in a gorgonian

coral (Briareum asbestinum) over a depth cline. Mar. Ecol. Prog. Ser. 94:61–69.

Williamson, E. A., K. B. Strychar, K. Withers, and B. Sterba-Boatwright. 2011. Effects of

salinity and sedimentation on the gorgonian coral Leptogorgia virgulata (Lamarck 1815). J.

Exp. Mar. Biol. Ecol. 409:331–338.

Yoshioka, P. M. 1994. Size-specific life history pattern of a shallow-water gorgonian. J. Exp.

Mar. Biol. Ecol. 184:111–122.

______. 1996. Variable recruitment and its effects on the population and community

structure of shallow-water gorgonians. Bull. Mar. Sci. 59:433–443.

30

______. 2005. Biotic neighborhoods of shallow-water gorgonians of Puerto Rico. Bull.

Mar. Sci. 76(3):625–636.

______. 2009. Sediment transport and the distribution of shallow-water gorgonians. Carib.

J. Sci. 45:254–259.

______and B. B. Yoshioka. 1987. Variable effects of Hurricane David on the shallow-

water gorgonians of Puerto Rico. Bull. Mar. Sci. 40:132–144.

31