A Checklist of Alien and Cryptogenic Aquatic Species in Ireland
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Twenty Thousand Parasites Under The
ADVERTIMENT. Lʼaccés als continguts dʼaquesta tesi queda condicionat a lʼacceptació de les condicions dʼús establertes per la següent llicència Creative Commons: http://cat.creativecommons.org/?page_id=184 ADVERTENCIA. El acceso a los contenidos de esta tesis queda condicionado a la aceptación de las condiciones de uso establecidas por la siguiente licencia Creative Commons: http://es.creativecommons.org/blog/licencias/ WARNING. The access to the contents of this doctoral thesis it is limited to the acceptance of the use conditions set by the following Creative Commons license: https://creativecommons.org/licenses/?lang=en Departament de Biologia Animal, Biologia Vegetal i Ecologia Tesis Doctoral Twenty thousand parasites under the sea: a multidisciplinary approach to parasite communities of deep-dwelling fishes from the slopes of the Balearic Sea (NW Mediterranean) Tesis doctoral presentada por Sara Maria Dallarés Villar para optar al título de Doctora en Acuicultura bajo la dirección de la Dra. Maite Carrassón López de Letona, del Dr. Francesc Padrós Bover y de la Dra. Montserrat Solé Rovira. La presente tesis se ha inscrito en el programa de doctorado en Acuicultura, con mención de calidad, de la Universitat Autònoma de Barcelona. Los directores Maite Carrassón Francesc Padrós Montserrat Solé López de Letona Bover Rovira Universitat Autònoma de Universitat Autònoma de Institut de Ciències Barcelona Barcelona del Mar (CSIC) La tutora La doctoranda Maite Carrassón Sara Maria López de Letona Dallarés Villar Universitat Autònoma de Barcelona Bellaterra, diciembre de 2016 ACKNOWLEDGEMENTS Cuando miro atrás, al comienzo de esta tesis, me doy cuenta de cuán enriquecedora e importante ha sido para mí esta etapa, a todos los niveles. -
Role of Symbiotic Bacteria on Life History Traits of Freshwater Crustacean, Daphnia Magna
Title Role of symbiotic bacteria on life history traits of freshwater crustacean, Daphnia magna Author(s) Peerakietkhajorn, Saranya Citation Issue Date Text Version ETD URL https://doi.org/10.18910/54011 DOI 10.18910/54011 rights Note Osaka University Knowledge Archive : OUKA https://ir.library.osaka-u.ac.jp/ Osaka University Doctoral Dissertation Role of symbiotic bacteria on life history traits of freshwater crustacean, Daphnia magna Saranya Peerakietkhajorn June 2015 Department of Biotechnology Graduate School of Engineering Osaka University 1 Contents Chapter 1 General introduction 5 1.1 Biology of Daphnia 6 1.2 Daphnia in bioenvironmental sciences 10 1.3 Molecular genetics of Daphnia 10 1.4 Symbiosis 11 1.5 Objective of this study 14 Chapter 2 Role of symbiotic bacteria on life history traits of D. magna and bacterial community composition 2.1 Introduction 15 2.2 Material and Methods 2.2.1 Daphnia strain and culture condition 16 2.2.2 Axenic Chlorella 17 2.2.3 Preparation of aposymbiotic juvenile Daphnia 17 2.2.4 Bacteria-free culture of aposymbiotic Daphnia 18 2.2.5 Determination of longevity of Daphnia 18 2.2.6 Re-infection by co-culture with symbiotic Daphnia 18 2.2.7 Re-infection by dipping in Daphnia extracts 18 2.2.8 DNA extraction 19 2.2.9 Quantitative polymerase chain reaction (qPCR) 19 2.2.10 Sequencing 20 2.2.11 Statistical analyse 20 2.3 Results 2 2.3.1 Generation of aposymbiotic Daphnia 20 2.3.2 Longevity of aposymbiotic Daphnia 22 2.3.3 Population dynamics of aposymbiotic Daphnia 23 2.3.4 Recovery of fecundity of aposymbiotic Daphnia by re-infection 23 2.3.5 Sequencing of symbiotic bacteria 26 2.4 Discussion 30 2.5 Summary 32 Chapter 3 Role of Limnohabitans, a dominant bacterium on D. -
Research Article Genetic Diversity of Freshwater Leeches in Lake Gusinoe (Eastern Siberia, Russia)
Hindawi Publishing Corporation e Scientific World Journal Volume 2014, Article ID 619127, 11 pages http://dx.doi.org/10.1155/2014/619127 Research Article Genetic Diversity of Freshwater Leeches in Lake Gusinoe (Eastern Siberia, Russia) Irina A. Kaygorodova,1 Nadezhda Mandzyak,1 Ekaterina Petryaeva,1,2 and Nikolay M. Pronin3 1 Limnological Institute, 3 Ulan-Batorskaja Street, Irkutsk 664033, Russia 2 Irkutsk State University, 5 Sukhe-Bator Street, Irkutsk 664003, Russia 3 Institute of General and Experimental Biology, 6 Sakhyanova Street, Ulan-Ude 670047, Russia Correspondence should be addressed to Irina A. Kaygorodova; [email protected] Received 30 July 2014; Revised 7 November 2014; Accepted 7 November 2014; Published 27 November 2014 Academic Editor: Rafael Toledo Copyright © 2014 Irina A. Kaygorodova et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The study of leeches from Lake Gusinoe and its adjacent area offered us the possibility to determine species diversity. Asa result, an updated species list of the Gusinoe Hirudinea fauna (Annelida, Clitellata) has been compiled. There are two orders and three families of leeches in the Gusinoe area: order Rhynchobdellida (families Glossiphoniidae and Piscicolidae) and order Arhynchobdellida (family Erpobdellidae). In total, 6 leech species belonging to 6 genera have been identified. Of these, 3 taxa belonging to the family Glossiphoniidae (Alboglossiphonia heteroclita f. papillosa, Hemiclepsis marginata,andHelobdella stagnalis) and representatives of 3 unidentified species (Glossiphonia sp., Piscicola sp., and Erpobdella sp.) have been recorded. The checklist gives a contemporary overview of the species composition of leeches and information on their hosts or substrates. -
Microbiomes of Gall-Inducing Copepod Crustaceans from the Corals Stylophora Pistillata (Scleractinia) and Gorgonia Ventalina
www.nature.com/scientificreports OPEN Microbiomes of gall-inducing copepod crustaceans from the corals Stylophora pistillata Received: 26 February 2018 Accepted: 18 July 2018 (Scleractinia) and Gorgonia Published: xx xx xxxx ventalina (Alcyonacea) Pavel V. Shelyakin1,2, Sofya K. Garushyants1,3, Mikhail A. Nikitin4, Sofya V. Mudrova5, Michael Berumen 5, Arjen G. C. L. Speksnijder6, Bert W. Hoeksema6, Diego Fontaneto7, Mikhail S. Gelfand1,3,4,8 & Viatcheslav N. Ivanenko 6,9 Corals harbor complex and diverse microbial communities that strongly impact host ftness and resistance to diseases, but these microbes themselves can be infuenced by stresses, like those caused by the presence of macroscopic symbionts. In addition to directly infuencing the host, symbionts may transmit pathogenic microbial communities. We analyzed two coral gall-forming copepod systems by using 16S rRNA gene metagenomic sequencing: (1) the sea fan Gorgonia ventalina with copepods of the genus Sphaerippe from the Caribbean and (2) the scleractinian coral Stylophora pistillata with copepods of the genus Spaniomolgus from the Saudi Arabian part of the Red Sea. We show that bacterial communities in these two systems were substantially diferent with Actinobacteria, Alphaproteobacteria, and Betaproteobacteria more prevalent in samples from Gorgonia ventalina, and Gammaproteobacteria in Stylophora pistillata. In Stylophora pistillata, normal coral microbiomes were enriched with the common coral symbiont Endozoicomonas and some unclassifed bacteria, while copepod and gall-tissue microbiomes were highly enriched with the family ME2 (Oceanospirillales) or Rhodobacteraceae. In Gorgonia ventalina, no bacterial group had signifcantly diferent prevalence in the normal coral tissues, copepods, and injured tissues. The total microbiome composition of polyps injured by copepods was diferent. -
Manual of Experimentation in Planaria
l\ MANUAL .OF PSYCHOLOGICAL EXPERIMENTATION ON PLANARIANS Ed;ted by James V. McConnell A MANUAL OF PSYCHOLOGICAL EXPERIMENTATI< ON PlANARIANS is a special publication of THE WORM RUNNER'S DIGEST James V. McConnell, Editor Mental Health Research Institute The University of Michigan Ann Arbor, Michigan BOARD OF CONSULTING EDITORS: Dr. Margaret L. Clay, Mental Health Research Institute, The University of Michigan Dr. WiHiam Corning, Department of Biophysics, Michigan State University Dr. Peter Driver, Stonehouse, Glouster, England Dr. Allan Jacobson, Department of Psychology, UCLA Dr. Marie Jenkins, Department of Biology, Madison College, Harrisonburg, Virginir Dr. Daniel P. Kimble, Department of Psychology, The University of Oregon Mrs. Reeva Jacobson Kimble, Department of Psychology, The University of Oregon Dr. Alexander Kohn, Department of Biophysics, Israel Institute for Biological Resear( Ness-Ziona, Israel Dr. Patrick Wells, Department of Biology, Occidental College, Los Angeles, Calif 01 __ Business Manager: Marlys Schutjer Circulation Manager: Mrs. Carolyn Towers Additional copies of this MANUAL may be purchased for $3.00 each from the Worm Runner's Digest, Box 644, Ann Arbor, Michigan. Information concerning subscription to the DIGEST itself may also be obtained from this address. Copyright 1965 by James V. McConnell No part of this MANUAL may be ;e�p� oduced in any form without prior written consen MANUAL OF PSYCHOLOGICAL EXPERIMENTATION ON PLANARIANS ·� �. : ,. '-';1\; DE DI�C A T 1 a'li � ac.-tJ.l that aILe. plle.J.le.l1te.cl iVl thiJ.l f, fANUA L [ve.lle. pUIlc.ilaJ.le.d blj ituVldlle.dJ.l 0& J.lc.ie.l1tiJ.ltJ.lo wil , '{'l1d.{.vidua"tlu aVld c.olle.c.t- c.aVlVlot be.g.{.Vl to l1ame. -
Review and Meta-Analysis of the Environmental Biology and Potential Invasiveness of a Poorly-Studied Cyprinid, the Ide Leuciscus Idus
REVIEWS IN FISHERIES SCIENCE & AQUACULTURE https://doi.org/10.1080/23308249.2020.1822280 REVIEW Review and Meta-Analysis of the Environmental Biology and Potential Invasiveness of a Poorly-Studied Cyprinid, the Ide Leuciscus idus Mehis Rohtlaa,b, Lorenzo Vilizzic, Vladimır Kovacd, David Almeidae, Bernice Brewsterf, J. Robert Brittong, Łukasz Głowackic, Michael J. Godardh,i, Ruth Kirkf, Sarah Nienhuisj, Karin H. Olssonh,k, Jan Simonsenl, Michał E. Skora m, Saulius Stakenas_ n, Ali Serhan Tarkanc,o, Nildeniz Topo, Hugo Verreyckenp, Grzegorz ZieRbac, and Gordon H. Coppc,h,q aEstonian Marine Institute, University of Tartu, Tartu, Estonia; bInstitute of Marine Research, Austevoll Research Station, Storebø, Norway; cDepartment of Ecology and Vertebrate Zoology, Faculty of Biology and Environmental Protection, University of Lodz, Łod z, Poland; dDepartment of Ecology, Faculty of Natural Sciences, Comenius University, Bratislava, Slovakia; eDepartment of Basic Medical Sciences, USP-CEU University, Madrid, Spain; fMolecular Parasitology Laboratory, School of Life Sciences, Pharmacy and Chemistry, Kingston University, Kingston-upon-Thames, Surrey, UK; gDepartment of Life and Environmental Sciences, Bournemouth University, Dorset, UK; hCentre for Environment, Fisheries & Aquaculture Science, Lowestoft, Suffolk, UK; iAECOM, Kitchener, Ontario, Canada; jOntario Ministry of Natural Resources and Forestry, Peterborough, Ontario, Canada; kDepartment of Zoology, Tel Aviv University and Inter-University Institute for Marine Sciences in Eilat, Tel Aviv, -
The 17Th International Colloquium on Amphipoda
Biodiversity Journal, 2017, 8 (2): 391–394 MONOGRAPH The 17th International Colloquium on Amphipoda Sabrina Lo Brutto1,2,*, Eugenia Schimmenti1 & Davide Iaciofano1 1Dept. STEBICEF, Section of Animal Biology, via Archirafi 18, Palermo, University of Palermo, Italy 2Museum of Zoology “Doderlein”, SIMUA, via Archirafi 16, University of Palermo, Italy *Corresponding author, email: [email protected] th th ABSTRACT The 17 International Colloquium on Amphipoda (17 ICA) has been organized by the University of Palermo (Sicily, Italy), and took place in Trapani, 4-7 September 2017. All the contributions have been published in the present monograph and include a wide range of topics. KEY WORDS International Colloquium on Amphipoda; ICA; Amphipoda. Received 30.04.2017; accepted 31.05.2017; printed 30.06.2017 Proceedings of the 17th International Colloquium on Amphipoda (17th ICA), September 4th-7th 2017, Trapani (Italy) The first International Colloquium on Amphi- Poland, Turkey, Norway, Brazil and Canada within poda was held in Verona in 1969, as a simple meet- the Scientific Committee: ing of specialists interested in the Systematics of Sabrina Lo Brutto (Coordinator) - University of Gammarus and Niphargus. Palermo, Italy Now, after 48 years, the Colloquium reached the Elvira De Matthaeis - University La Sapienza, 17th edition, held at the “Polo Territoriale della Italy Provincia di Trapani”, a site of the University of Felicita Scapini - University of Firenze, Italy Palermo, in Italy; and for the second time in Sicily Alberto Ugolini - University of Firenze, Italy (Lo Brutto et al., 2013). Maria Beatrice Scipione - Stazione Zoologica The Organizing and Scientific Committees were Anton Dohrn, Italy composed by people from different countries. -
Hiller & Lessios 2017
www.nature.com/scientificreports OPEN Phylogeography of Petrolisthes armatus, an invasive species with low dispersal ability Received: 20 February 2017 Alexandra Hiller & Harilaos A. Lessios Accepted: 27 April 2017 Theoretically, species with high population structure are likely to expand their range, because marginal Published: xx xx xxxx populations are free to adapt to local conditions; however, meta-analyses have found a negative relation between structure and invasiveness. The crab Petrolisthes armatus has a wide native range, which has expanded in the last three decades. We sequenced 1718 bp of mitochondrial DNA from native and recently established populations to determine the population structure of the former and the origin of the latter. There was phylogenetic separation between Atlantic and eastern Pacific populations, and between east and west Atlantic ones. Haplotypes on the coast of Florida and newly established populations in Georgia and South Carolina belong to a different clade from those from Yucatán to Brazil, though a few haplotypes are shared. In the Pacific, populations from Colombia and Ecuador are highly divergent from those from Panamá and the Sea of Cortez. In general, populations were separated hundreds to million years ago with little subsequent gene flow. High genetic diversity in the newly established populations shows that they were founded by many individuals. Range expansion appears to have been limited by low dispersal rather than lack of ability of marginal populations to adapt to extreme conditions. The population-genetic constitution of marine invasive species in their native range is increasingly being stud- ied in efforts to determine the source of invasions into new areas (reviews in refs 1–5). -
Diversity of Alien Macroinvertebrate Species in Serbian Waters
water Article Diversity of Alien Macroinvertebrate Species in Serbian Waters Katarina Zori´c* , Ana Atanackovi´c,Jelena Tomovi´c,Božica Vasiljevi´c,Bojana Tubi´c and Momir Paunovi´c Department for Hydroecology and Water Protection, Institute for Biological Research “Siniša Stankovi´c”—NationalInstitute of Republic of Serbia, University of Belgrade, Bulevar despota Stefana 142, 11060 Belgrade, Serbia; [email protected] (A.A.); [email protected] (J.T.); [email protected] (B.V.); [email protected] (B.T.); [email protected] (M.P.) * Correspondence: [email protected] Received: 29 September 2020; Accepted: 7 December 2020; Published: 15 December 2020 Abstract: This article provides the first comprehensive list of alien macroinvertebrate species registered and/or established in aquatic ecosystems in Serbia as a potential threat to native biodiversity. The list comprised field investigations, articles, grey literature, and unpublished data. Twenty-nine species of macroinvertebrates have been recorded since 1942, with a domination of the Ponto-Caspian faunistic elements. The majority of recorded species have broad distribution and are naturalized in the waters of Serbia, while occasional or single findings of seven taxa indicate that these species have failed to form populations. Presented results clearly show that the Danube is the main corridor for the introduction and spread of non-native species into Serbia. Keywords: Serbia; inland waters; allochthonous species; introduction 1. Introduction The Water Framework Directive (WFD) [1] represents key regulation and one of the most important documents in the European Union water legislation since it was adopted in 2000. -
Successions of Phytobenthos Species in a Mediterranean Transitional Water System: the Importance of Long Term Observations
A peer-reviewed open-access journal Nature ConservationSuccessions 34: 217–246 of phytobenthos (2019) species in a Mediterranean transitional water system... 217 doi: 10.3897/natureconservation.34.30055 RESEARCH ARTICLE http://natureconservation.pensoft.net Launched to accelerate biodiversity conservation Successions of phytobenthos species in a Mediterranean transitional water system: the importance of long term observations Antonella Petrocelli1, Ester Cecere1, Fernando Rubino1 1 Water Research Institute (IRSA) – CNR, via Roma 3, 74123 Taranto, Italy Corresponding author: Antonella Petrocelli ([email protected]) Academic editor: A. Lugliè | Received 25 September 2018 | Accepted 28 February 2019 | Published 3 May 2019 http://zoobank.org/5D4206FB-8C06-49C8-9549-F08497EAA296 Citation: Petrocelli A, Cecere E, Rubino F (2019) Successions of phytobenthos species in a Mediterranean transitional water system: the importance of long term observations. In: Mazzocchi MG, Capotondi L, Freppaz M, Lugliè A, Campanaro A (Eds) Italian Long-Term Ecological Research for understanding ecosystem diversity and functioning. Case studies from aquatic, terrestrial and transitional domains. Nature Conservation 34: 217–246. https://doi.org/10.3897/ natureconservation.34.30055 Abstract The availability of quantitative long term datasets on the phytobenthic assemblages of the Mar Piccolo of Taranto (southern Italy, Mediterranean Sea), a lagoon like semi-enclosed coastal basin included in the Italian LTER network, enabled careful analysis of changes occurring in the structure of the community over about thirty years. The total number of taxa differed over the years. Thirteen non-indigenous species in total were found, their number varied over the years, reaching its highest value in 2017. The dominant taxa differed over the years. -
The Contested Isle: the Hibernian Tribunal
The Contested Isle Credits AUTHORS: Mark Lawford, Christian Jensen Romer, Matt Ryan, AUTHOR BIOGRAPHIES Mark Shirley DEVELOPMENT, EDITING, & PROJECT MANAGEMENT: David Chart Mark Lawford lives, works, and writes for Ars Magica in East- PROOFREADING, LAYOUT & ART DIRECTION: Cam Banks bourne, England. He’s also working on some original fiction, PROOFREADING ASSISTANCE: Jessica Banks & Michelle Nephew so please do wish him luck. He is very grateful to his fellow PUBLISHER: John Nephew author Matt Ryan for helping realize his aim of writing for COVER ILLUSTRATION: Christian St. Pierre a Tribunal book. CARTOGRAPHY: Matt Ryan Christian Jensen Romer is an unlikely candidate to write about INTERIOR ART: Jason Cole, Jenna Fowler, Christian St. Pierre, Ireland, being a Dane living in England. His passion for Irish Gabriel Verdon history and the medieval saints however led this to be his ADDITIONAL ART: Celtic Design. Mineola, NY: Dover Publications, favorite Ars Magica project to date, and he hopes you find as Inc., 2007. much joy in it as he did. He would like to dedicate his part of ARS MAGICA FIFTH EDITION TRADE DRESS: J. Scott Reeves this book to the memory of Christina Jones, who taught him PUBLISHER’S SPECIAL THANKS: Jerry Corrick & the gang at the the little Irish he knows and told him tales of her homeland. Source. Matt Ryan works in a university library in upstate New York. His forefathers were early participants in the Irish diaspora FIRST ROUND PLAYTESTERS: Jason Brennan, Justin Brennan, Elisha and his family has been in the States for several generations. Campbell, Robert Major; Leon Bullock, Peter Ryan, Chris He visited Ireland in 2001, during which time he swam in Barrett, John A Edge; Eirik Bull, Karl Trygve Kalleberg, Hel- the cove on Cape Clear Island, where he would later place ge Furuseth, André Neergaard, Sigurd Lund; Donna Giltrap, the covenant Cliffheart. -
Taxonomy, Biology and Phylogeny of Miraciidae (Copepoda: Harpacticoida)
TAXONOMY, BIOLOGY AND PHYLOGENY OF MIRACIIDAE (COPEPODA: HARPACTICOIDA) Rony Huys & Ruth Böttger-Schnack SARSIA Huys, Rony & Ruth Böttger-Schnack 1994 12 30. Taxonomy, biology and phytogeny of Miraciidae (Copepoda: Harpacticoida). - Sarsia 79:207-283. Bergen. ISSN 0036-4827. The holoplanktonic family Miraciidae (Copepoda, Harpacticoida) is revised and a key to the four monotypic genera presented. Amended diagnoses are given for Miracia Dana, Oculosetella Dahl and Macrosetella A. Scott, based on complete redescriptions of their respective type species M. efferata Dana, 1849, O. gracilis (Dana, 1849) and M. gracilis (Dana, 1847). A fourth genus Distioculus gen. nov. is proposed to accommodate Miracia minor T. Scott, 1894. The occurrence of two size-morphs of M. gracilis in the Red Sea is discussed, and reliable distribution records of the problematic O. gracilis are compiled. The first nauplius of M. gracilis is described in detail and changes in the structure of the antennule, P2 endopod and caudal ramus during copepodid development are illustrated. Phylogenetic analysis revealed that Miracia is closest to the miraciid ancestor and placed Oculosetella-Macrosetella at the terminal branch of the cladogram. Various aspects of miraciid biology are reviewed, including reproduction, postembryonic development, verti cal and geographical distribution, bioluminescence, photoreception and their association with filamentous Cyanobacteria {Trichodesmium). Rony Huys, Department of Zoology, The Natural History Museum, Cromwell Road, Lon don SW7 5BD, England. - Ruth Böttger-Schnack, Institut für Meereskunde, Düsternbroo- ker Weg 20, D-24105 Kiel, Germany. CONTENTS Introduction.............. .. 207 Genus Distioculus pacticoids can be carried into the open ocean by Material and methods ... .. 208 gen. nov.................. 243 algal rafting. Truly planktonic species which perma Systematics and Distioculus minor nently reside in the water column, however, form morphology ..........