Centrality Measures
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Practical Parallel Hypergraph Algorithms
Practical Parallel Hypergraph Algorithms Julian Shun [email protected] MIT CSAIL Abstract v While there has been signicant work on parallel graph pro- 0 cessing, there has been very surprisingly little work on high- e0 performance hypergraph processing. This paper presents v0 v1 v1 a collection of ecient parallel algorithms for hypergraph processing, including algorithms for betweenness central- e1 ity, maximal independent set, k-core decomposition, hyper- v2 trees, hyperpaths, connected components, PageRank, and v2 v3 e single-source shortest paths. For these problems, we either 2 provide new parallel algorithms or more ecient implemen- v3 tations than prior work. Furthermore, our algorithms are theoretically-ecient in terms of work and depth. To imple- (a) Hypergraph (b) Bipartite representation ment our algorithms, we extend the Ligra graph processing Figure 1. An example hypergraph representing the groups framework to support hypergraphs, and our implementa- , , , , , , and , , and its bipartite repre- { 0 1 2} { 1 2 3} { 0 3} tions benet from graph optimizations including switching sentation. between sparse and dense traversals based on the frontier size, edge-aware parallelization, using buckets to prioritize processing of vertices, and compression. Our experiments represented as hyperedges, can contain an arbitrary number on a 72-core machine and show that our algorithms obtain of vertices. Hyperedges correspond to group relationships excellent parallel speedups, and are signicantly faster than among vertices (e.g., a community in a social network). An algorithms in existing hypergraph processing frameworks. example of a hypergraph is shown in Figure 1a. CCS Concepts • Computing methodologies → Paral- Hypergraphs have been shown to enable richer analy- lel algorithms; Shared memory algorithms. -
Directed Graph Algorithms
Directed Graph Algorithms CSE 373 Data Structures Readings • Reading Chapter 13 › Sections 13.3 and 13.4 Digraphs 2 Topological Sort 142 322 143 321 Problem: Find an order in which all these courses can 326 be taken. 370 341 Example: 142 Æ 143 Æ 378 Æ 370 Æ 321 Æ 341 Æ 322 Æ 326 Æ 421 Æ 401 378 421 In order to take a course, you must 401 take all of its prerequisites first Digraphs 3 Topological Sort Given a digraph G = (V, E), find a linear ordering of its vertices such that: for any edge (v, w) in E, v precedes w in the ordering B C A F D E Digraphs 4 Topo sort – valid solution B C Any linear ordering in which A all the arrows go to the right F is a valid solution D E A B F C D E Note that F can go anywhere in this list because it is not connected. Also the solution is not unique. Digraphs 5 Topo sort – invalid solution B C A Any linear ordering in which an arrow goes to the left F is not a valid solution D E A B F C E D NO! Digraphs 6 Paths and Cycles • Given a digraph G = (V,E), a path is a sequence of vertices v1,v2, …,vk such that: ›(vi,vi+1) in E for 1 < i < k › path length = number of edges in the path › path cost = sum of costs of each edge • A path is a cycle if : › k > 1; v1 = vk •G is acyclic if it has no cycles. -
Approximating Network Centrality Measures Using Node Embedding and Machine Learning
Approximating Network Centrality Measures Using Node Embedding and Machine Learning Matheus R. F. Mendon¸ca,Andr´eM. S. Barreto, and Artur Ziviani ∗† Abstract Extracting information from real-world large networks is a key challenge nowadays. For instance, computing a node centrality may become unfeasible depending on the intended centrality due to its computational cost. One solution is to develop fast methods capable of approximating network centralities. Here, we propose an approach for efficiently approximating node centralities for large networks using Neural Networks and Graph Embedding techniques. Our proposed model, entitled Network Centrality Approximation using Graph Embedding (NCA-GE), uses the adjacency matrix of a graph and a set of features for each node (here, we use only the degree) as input and computes the approximate desired centrality rank for every node. NCA-GE has a time complexity of O(jEj), E being the set of edges of a graph, making it suitable for large networks. NCA-GE also trains pretty fast, requiring only a set of a thousand small synthetic scale-free graphs (ranging from 100 to 1000 nodes each), and it works well for different node centralities, network sizes, and topologies. Finally, we compare our approach to the state-of-the-art method that approximates centrality ranks using the degree and eigenvector centralities as input, where we show that the NCA-GE outperforms the former in a variety of scenarios. 1 Introduction Networks are present in several real-world applications spread among different disciplines, such as biology, mathematics, sociology, and computer science, just to name a few. Therefore, network analysis is a crucial tool for extracting relevant information. -
Graph Varieties Axiomatized by Semimedial, Medial, and Some Other Groupoid Identities
Discussiones Mathematicae General Algebra and Applications 40 (2020) 143–157 doi:10.7151/dmgaa.1344 GRAPH VARIETIES AXIOMATIZED BY SEMIMEDIAL, MEDIAL, AND SOME OTHER GROUPOID IDENTITIES Erkko Lehtonen Technische Universit¨at Dresden Institut f¨ur Algebra 01062 Dresden, Germany e-mail: [email protected] and Chaowat Manyuen Department of Mathematics, Faculty of Science Khon Kaen University Khon Kaen 40002, Thailand e-mail: [email protected] Abstract Directed graphs without multiple edges can be represented as algebras of type (2, 0), so-called graph algebras. A graph is said to satisfy an identity if the corresponding graph algebra does, and the set of all graphs satisfying a set of identities is called a graph variety. We describe the graph varieties axiomatized by certain groupoid identities (medial, semimedial, autodis- tributive, commutative, idempotent, unipotent, zeropotent, alternative). Keywords: graph algebra, groupoid, identities, semimediality, mediality. 2010 Mathematics Subject Classification: 05C25, 03C05. 1. Introduction Graph algebras were introduced by Shallon [10] in 1979 with the purpose of providing examples of nonfinitely based finite algebras. Let us briefly recall this concept. Given a directed graph G = (V, E) without multiple edges, the graph algebra associated with G is the algebra A(G) = (V ∪ {∞}, ◦, ∞) of type (2, 0), 144 E. Lehtonen and C. Manyuen where ∞ is an element not belonging to V and the binary operation ◦ is defined by the rule u, if (u, v) ∈ E, u ◦ v := (∞, otherwise, for all u, v ∈ V ∪ {∞}. We will denote the product u ◦ v simply by juxtaposition uv. Using this representation, we may view any algebraic property of a graph algebra as a property of the graph with which it is associated. -
Networkx: Network Analysis with Python
NetworkX: Network Analysis with Python Salvatore Scellato Full tutorial presented at the XXX SunBelt Conference “NetworkX introduction: Hacking social networks using the Python programming language” by Aric Hagberg & Drew Conway Outline 1. Introduction to NetworkX 2. Getting started with Python and NetworkX 3. Basic network analysis 4. Writing your own code 5. You are ready for your project! 1. Introduction to NetworkX. Introduction to NetworkX - network analysis Vast amounts of network data are being generated and collected • Sociology: web pages, mobile phones, social networks • Technology: Internet routers, vehicular flows, power grids How can we analyze this networks? Introduction to NetworkX - Python awesomeness Introduction to NetworkX “Python package for the creation, manipulation and study of the structure, dynamics and functions of complex networks.” • Data structures for representing many types of networks, or graphs • Nodes can be any (hashable) Python object, edges can contain arbitrary data • Flexibility ideal for representing networks found in many different fields • Easy to install on multiple platforms • Online up-to-date documentation • First public release in April 2005 Introduction to NetworkX - design requirements • Tool to study the structure and dynamics of social, biological, and infrastructure networks • Ease-of-use and rapid development in a collaborative, multidisciplinary environment • Easy to learn, easy to teach • Open-source tool base that can easily grow in a multidisciplinary environment with non-expert users -
Network Analysis of the Multimodal Freight Transportation System in New York City
Network Analysis of the Multimodal Freight Transportation System in New York City Project Number: 15 – 2.1b Year: 2015 FINAL REPORT June 2018 Principal Investigator Qian Wang Researcher Shuai Tang MetroFreight Center of Excellence University at Buffalo Buffalo, NY 14260-4300 Network Analysis of the Multimodal Freight Transportation System in New York City ABSTRACT The research is aimed at examining the multimodal freight transportation network in the New York metropolitan region to identify critical links, nodes and terminals that affect last-mile deliveries. Two types of analysis were conducted to gain a big picture of the region’s freight transportation network. First, three categories of network measures were generated for the highway network that carries the majority of last-mile deliveries. They are the descriptive measures that demonstrate the basic characteristics of the highway network, the network structure measures that quantify the connectivity of nodes and links, and the accessibility indices that measure the ease to access freight demand, services and activities. Second, 71 multimodal freight terminals were selected and evaluated in terms of their accessibility to major multimodal freight demand generators such as warehousing establishments. As found, the most important highways nodes that are critical in terms of connectivity and accessibility are those in and around Manhattan, particularly the bridges and tunnels connecting Manhattan to neighboring areas. Major multimodal freight demand generators, such as warehousing establishments, have better accessibility to railroad and marine port terminals than air and truck terminals in general. The network measures and findings in the research can be used to understand the inventory of the freight network in the system and to conduct freight travel demand forecasting analysis. -
Geodesic Distance Descriptors
Geodesic Distance Descriptors Gil Shamai and Ron Kimmel Technion - Israel Institute of Technologies [email protected] [email protected] Abstract efficiency of state of the art shape matching procedures. The Gromov-Hausdorff (GH) distance is traditionally used for measuring distances between metric spaces. It 1. Introduction was adapted for non-rigid shape comparison and match- One line of thought in shape analysis considers an ob- ing of isometric surfaces, and is defined as the minimal ject as a metric space, and object matching, classification, distortion of embedding one surface into the other, while and comparison as the operation of measuring the discrep- the optimal correspondence can be described as the map ancies and similarities between such metric spaces, see, for that minimizes this distortion. Solving such a minimiza- example, [13, 33, 27, 23, 8, 3, 24]. tion is a hard combinatorial problem that requires pre- Although theoretically appealing, the computation of computation and storing of all pairwise geodesic distances distances between metric spaces poses complexity chal- for the matched surfaces. A popular way for compact repre- lenges as far as direct computation and memory require- sentation of functions on surfaces is by projecting them into ments are involved. As a remedy, alternative representa- the leading eigenfunctions of the Laplace-Beltrami Opera- tion spaces were proposed [26, 22, 15, 10, 31, 30, 19, 20]. tor (LBO). When truncated, the basis of the LBO is known The question of which representation to use in order to best to be the optimal for representing functions with bounded represent the metric space that define each form we deal gradient in a min-max sense. -
Measuring Homophily
Measuring Homophily Matteo Cristani, Diana Fogoroasi, and Claudio Tomazzoli University of Verona fmatteo.cristani, diana.fogoroasi.studenti, [email protected] Abstract. Social Network Analysis is employed widely as a means to compute the probability that a given message flows through a social net- work. This approach is mainly grounded upon the correct usage of three basic graph- theoretic measures: degree centrality, closeness centrality and betweeness centrality. We show that, in general, those indices are not adapt to foresee the flow of a given message, that depends upon indices based on the sharing of interests and the trust about depth in knowledge of a topic. We provide new definitions for measures that over- come the drawbacks of general indices discussed above, using Semantic Social Network Analysis, and show experimental results that show that with these measures we have a different understanding of a social network compared to standard measures. 1 Introduction Social Networks are considered, on the current panorama of web applications, as the principal virtual space for online communication. Therefore, it is of strong relevance for practical applications to understand how strong a member of the network is with respect to the others. Traditionally, sociological investigations have dealt with problems of defining properties of the users that can value their relevance (sometimes their impor- tance, that can be considered different, the first denoting the ability to emerge, and the second the relevance perceived by the others). Scholars have developed several measures and studied how to compute them in different types of graphs, used as models for social networks. This field of research has been named Social Network Analysis. -
Modeling Customer Preferences Using Multidimensional Network Analysis in Engineering Design
Modeling customer preferences using multidimensional network analysis in engineering design Mingxian Wang1, Wei Chen1, Yun Huang2, Noshir S. Contractor2 and Yan Fu3 1 Department of Mechanical Engineering, Northwestern University, Evanston, IL 60208, USA 2 Science of Networks in Communities, Northwestern University, Evanston, IL 60208, USA 3 Global Data Insight and Analytics, Ford Motor Company, Dearborn, MI 48121, USA Abstract Motivated by overcoming the existing utility-based choice modeling approaches, we present a novel conceptual framework of multidimensional network analysis (MNA) for modeling customer preferences in supporting design decisions. In the proposed multidimensional customer–product network (MCPN), customer–product interactions are viewed as a socio-technical system where separate entities of `customers' and `products' are simultaneously modeled as two layers of a network, and multiple types of relations, such as consideration and purchase, product associations, and customer social interactions, are considered. We first introduce a unidimensional network where aggregated customer preferences and product similarities are analyzed to inform designers about the implied product competitions and market segments. We then extend the network to a multidimensional structure where customer social interactions are introduced for evaluating social influence on heterogeneous product preferences. Beyond the traditional descriptive analysis used in network analysis, we employ the exponential random graph model (ERGM) as a unified statistical -
RESEARCH PAPER . Text Information Aggregation with Centrality Attention
SCIENCE CHINA Information Sciences . RESEARCH PAPER . Text Information Aggregation with Centrality Attention Jingjing Gong, Hang Yan, Yining Zheng, Qipeng Guo, Xipeng Qiu* & Xuanjing Huang School of Computer Science, Fudan University, Shanghai 200433, China Shanghai Key Laboratory of Intelligent Information Processing, Fudan University, Shanghai 200433, China fjjgong, hyan11, ynzheng15, qpguo16, xpqiu, [email protected] Abstract A lot of natural language processing problems need to encode the text sequence as a fix-length vector, which usually involves aggregation process of combining the representations of all the words, such as pooling or self-attention. However, these widely used aggregation approaches did not take higher-order relationship among the words into consideration. Hence we propose a new way of obtaining aggregation weights, called eigen-centrality self-attention. More specifically, we build a fully-connected graph for all the words in a sentence, then compute the eigen-centrality as the attention score of each word. The explicit modeling of relationships as a graph is able to capture some higher-order dependency among words, which helps us achieve better results in 5 text classification tasks and one SNLI task than baseline models such as pooling, self-attention and dynamic routing. Besides, in order to compute the dominant eigenvector of the graph, we adopt power method algorithm to get the eigen-centrality measure. Moreover, we also derive an iterative approach to get the gradient for the power method process to reduce both memory consumption and computation requirement. Keywords Information Aggregation, Eigen Centrality, Text Classification, NLP, Deep Learning Citation Jingjing Gong, Hang Yan, Yining Zheng, Qipeng Guo, Xipeng Qiu, Xuanjing Huang. -
Matroid Theory
MATROID THEORY HAYLEY HILLMAN 1 2 HAYLEY HILLMAN Contents 1. Introduction to Matroids 3 1.1. Basic Graph Theory 3 1.2. Basic Linear Algebra 4 2. Bases 5 2.1. An Example in Linear Algebra 6 2.2. An Example in Graph Theory 6 3. Rank Function 8 3.1. The Rank Function in Graph Theory 9 3.2. The Rank Function in Linear Algebra 11 4. Independent Sets 14 4.1. Independent Sets in Graph Theory 14 4.2. Independent Sets in Linear Algebra 17 5. Cycles 21 5.1. Cycles in Graph Theory 22 5.2. Cycles in Linear Algebra 24 6. Vertex-Edge Incidence Matrix 25 References 27 MATROID THEORY 3 1. Introduction to Matroids A matroid is a structure that generalizes the properties of indepen- dence. Relevant applications are found in graph theory and linear algebra. There are several ways to define a matroid, each relate to the concept of independence. This paper will focus on the the definitions of a matroid in terms of bases, the rank function, independent sets and cycles. Throughout this paper, we observe how both graphs and matrices can be viewed as matroids. Then we translate graph theory to linear algebra, and vice versa, using the language of matroids to facilitate our discussion. Many proofs for the properties of each definition of a matroid have been omitted from this paper, but you may find complete proofs in Oxley[2], Whitney[3], and Wilson[4]. The four definitions of a matroid introduced in this paper are equiv- alent to each other. -
Network Science
This is a preprint of Katy Börner, Soma Sanyal and Alessandro Vespignani (2007) Network Science. In Blaise Cronin (Ed) Annual Review of Information Science & Technology, Volume 41. Medford, NJ: Information Today, Inc./American Society for Information Science and Technology, chapter 12, pp. 537-607. Network Science Katy Börner School of Library and Information Science, Indiana University, Bloomington, IN 47405, USA [email protected] Soma Sanyal School of Library and Information Science, Indiana University, Bloomington, IN 47405, USA [email protected] Alessandro Vespignani School of Informatics, Indiana University, Bloomington, IN 47406, USA [email protected] 1. Introduction.............................................................................................................................................2 2. Notions and Notations.............................................................................................................................4 2.1 Graphs and Subgraphs .........................................................................................................................5 2.2 Graph Connectivity..............................................................................................................................7 3. Network Sampling ..................................................................................................................................9 4. Network Measurements........................................................................................................................11