A Taxonomic Re-Evaluation of the Allium Sanbornii Complex
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Other Botanical Resource Assessment
USDA Forest Service Tahoe National Forest District Yuba River Ranger District OTHER BOTANICAL RESOURCE ASSESSMENT Yuba Project 08/01/2017 Prepared by: Date: Courtney Rowe, District Botanist TABLE OF CONTENTS 1 TNF Watch List Botanical Species ........................................................................................................ 1 1.1 Introduction ................................................................................................................................ 1 1.2 Summary of Analysis Procedure .................................................................................................. 2 1.3 Project Compliance ..................................................................................................................... 2 2 Special Status Plant Communities ....................................................................................................... 5 2.1 Introduction ................................................................................................................................ 5 2.2 Project Compliance ..................................................................................................................... 5 3 Special Management Designations ..................................................................................................... 6 3.1 Introduction ................................................................................................................................ 6 3.2 Project Compliance .................................................................................................................... -
Amphibian Alliance for Zero Extinction Sites in Chiapas and Oaxaca
Amphibian Alliance for Zero Extinction Sites in Chiapas and Oaxaca John F. Lamoreux, Meghan W. McKnight, and Rodolfo Cabrera Hernandez Occasional Paper of the IUCN Species Survival Commission No. 53 Amphibian Alliance for Zero Extinction Sites in Chiapas and Oaxaca John F. Lamoreux, Meghan W. McKnight, and Rodolfo Cabrera Hernandez Occasional Paper of the IUCN Species Survival Commission No. 53 The designation of geographical entities in this book, and the presentation of the material, do not imply the expression of any opinion whatsoever on the part of IUCN concerning the legal status of any country, territory, or area, or of its authorities, or concerning the delimitation of its frontiers or boundaries. The views expressed in this publication do not necessarily reflect those of IUCN or other participating organizations. Published by: IUCN, Gland, Switzerland Copyright: © 2015 International Union for Conservation of Nature and Natural Resources Reproduction of this publication for educational or other non-commercial purposes is authorized without prior written permission from the copyright holder provided the source is fully acknowledged. Reproduction of this publication for resale or other commercial purposes is prohibited without prior written permission of the copyright holder. Citation: Lamoreux, J. F., McKnight, M. W., and R. Cabrera Hernandez (2015). Amphibian Alliance for Zero Extinction Sites in Chiapas and Oaxaca. Gland, Switzerland: IUCN. xxiv + 320pp. ISBN: 978-2-8317-1717-3 DOI: 10.2305/IUCN.CH.2015.SSC-OP.53.en Cover photographs: Totontepec landscape; new Plectrohyla species, Ixalotriton niger, Concepción Pápalo, Thorius minutissimus, Craugastor pozo (panels, left to right) Back cover photograph: Collecting in Chamula, Chiapas Photo credits: The cover photographs were taken by the authors under grant agreements with the two main project funders: NGS and CEPF. -
Mise Au Point D'une Méthode De Détection
Caractérisation des agents phytopathogènes responsables des pertes de la filière ail : mise au point d’une méthode de détection Paul L. Chretien To cite this version: Paul L. Chretien. Caractérisation des agents phytopathogènes responsables des pertes de la filière ail : mise au point d’une méthode de détection. Sciences agricoles. Université d’Avignon, 2021. Français. NNT : 2021AVIG0363. tel-03211009 HAL Id: tel-03211009 https://tel.archives-ouvertes.fr/tel-03211009 Submitted on 28 Apr 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. THÈSE DE DOCTORAT D’AVIGNON UNIVERSITÉ Ecole Doctorale 536 Agrosciences & Sciences Spécialité / Discipline de doctorat : BIOLOGIE Laboratoire Pathologie Végétale – INRAE PACA Présentée par Paul Chrétien Caractérisation des agents phytopathogènes responsables des pertes de la filière ail Mise au point d’une méthode de détection Soutenue publiquement le 18/02/2021 devant le jury composé de : Marie-Hélène Balesdent, Directrice de recherche, INRAE Rapporteure Philippe Reignault, Professeur, ANSES Rapporteur François Lecompte, Chargé de recherche, INRAE Examinateur Frédéric Suffert, Ingénieur de recherche, INRAE Examinateur Christel Leyronas, Ingénieure de recherche, INRAE Directrice de thèse Cindy Morris, Directrice de recherche, INRAE Directrice de thèse Céline Vézian, Responsable R&D, Alinéa coopérative Invitée À toi qui retombera sur ces pages. -
Special-Status Plants and Invasive/Noxious Weeds Technical Report
SACRAMENTO MUNICIPAL UTILITY DISTRICT UPPER AMERICAN RIVER PROJECT (FERC NO. 2101) SPECIAL-STATUS PLANTS AND INVASIVE/NOXIOUS WEEDS TECHNICAL REPORT Prepared by: Devine Tarbell & Associates, Inc. Sacramento, California Prepared for: Sacramento Municipal Utility District Sacramento, California JULY 2004 Sacramento Municipal Utility District Upper American River Project FERC Project No. 2101 TABLE OF CONTENTS Section & Description Page 1.0 INTRODUCTION .............................................................................................................. 1 2.0 BACKGROUND ................................................................................................................ 2 2.1 Special-Status Plants Study Plan ............................................................................ 2 2.2 Invasive/Noxious Weeds Study Plan...................................................................... 3 2.3 Water Year Types................................................................................................... 4 2.4 Agency Requested Information .............................................................................. 5 3.0 METHODS ......................................................................................................................... 5 3.1 Special-Status Plants............................................................................................... 5 3.2 Noxious Weeds ....................................................................................................... 6 4.0 RESULTS .......................................................................................................................... -
NORTH TABLE MOUNTAIN ECOLOGICAL RESERVE Land Management Plan
NORTH TABLE MOUNTAIN ECOLOGICAL RESERVE Land Management Plan Prepared for: December 2006 State of California The Resources Agency Department of Fish and Game NORTH TABLE MOUNTAIN ECOLOGICAL RESERVE Land Management Plan Prepared for: December 2006 State of California The Resources Agency Department of Fish and Game 8950 Cal Center Drive Building 3, Suite 300 Sacramento, CA 95826 916.564.4500 www.esassoc.com Los Angeles Oakland Orlando Petaluma Portland San Francisco Seattle Tampa 204427 ESA J MORTH TABLE MOUNTAIN ECOLOGICAL RESERVE Land Management Plan Approved by: Acting RegionalTftartager / Date _nhltn Acting Deputy Direaor for Regional Operations 'Date TABLE OF CONTENTS North Table Mountain Ecological Reserve Land Management Plan Page 1 Summary 1-1 2 Introduction 2-1 Purpose of Acquisition 2-1 Acquisition History 2-1 Purpose of This Management Plan 2-1 3 Property Description 3-1 Geographical Setting 3-1 Property Boundaries and Adjacent Lands 3-1 Geology, Soils, Climate, and Hydrology 3-1 Cultural Features 3-11 4 Vegetation Types, Habitat, and Species Descriptions 4-1 Vegetation Types and Habitats 4-1 Special-Status Species 4-5 5 Management Goals and Environmental Impacts 5-1 Definition of Terms Used in This Plan 5-1 Biological Elements: Goals, Objectives, and Environmental Impacts 5-1 Public Use Elements: Goals and Environmental Impacts 5-5 Facility Maintenance Elements: Goals and Environmental Impacts 5-6 6 Operations and Maintenance Summary 6-1 Operations and Maintenance Tasks to Implement Plan 6-1 Existing Staff and Additional Personnel -
Subphyl. Nov., Based on Multi-Gene Genealogies
ISSN (print) 0093-4666 © 2011. Mycotaxon, Ltd. ISSN (online) 2154-8889 MYCOTAXON Volume 115, pp. 353–363 January–March 2011 doi: 10.5248/115.353 Mortierellomycotina subphyl. nov., based on multi-gene genealogies K. Hoffmann1*, K. Voigt1 & P.M. Kirk2 1 Jena Microbial Resource Collection, Institute of Microbiology, University of Jena, Neugasse 25, 07743 Jena, Germany 2 CABI UK Centre, Bakeham Lane, Egham, Surrey TW20 9TY, United Kingdom *Correspondence to: Hoff[email protected] Abstract — TheMucoromycotina unifies two heterogenous orders of the sporangiferous, soil- inhabiting fungi. The Mucorales comprise saprobic, occasionally facultatively mycoparasitic, taxa bearing a columella, whereas the Mortierellales encompass mainly saprobic fungi lacking a columella. Multi-locus phylogenetic analyses based on eight nuclear genes encoding 18S and 28S rRNA, actin, alpha and beta tubulin, translation elongation factor 1alpha, and RNA polymerase II subunits 1 and 2 provide strong support for separation of the Mortierellales from the Mucoromycotina. The existence of a columella is shown to serve as a synapomorphic morphological trait unique to Mucorales, supporting the taxonomic separation of the acolumellate Mortierellales from the columellate Mucoromycotina. Furthermore, irregular hyphal septation and development of subbasally vesiculate sporangiophores bearing single terminal sporangia strongly correlate with the phylogenetic delimitation of Mortierellales, supporting a new subphylum, Mortierellomycotina. Key words — Zygomycetes, SSU rDNA, LSU rDNA, protein-coding genes, monophyly Introduction The type species ofMortierella Coem. 1863, M. polycephala Coem. 1863, was originally isolated from a parasitic interaction with a mushroom and named in honour of M. Du Mortier, the president of the Société de Botanique de Belgique (Coemans 1863). However, the common habit of mortierellalean species is as soil saprobes, enabling the fungi to grow on excrements, decaying plants, or (not infrequently) on decaying mushrooms and mucoralean fungi (Fischer 1892). -
Region 1 Milkweed and Monarch Monitoring Geodatabase User Guide
Region 1 Milkweed and Monarch Monitoring Geodatabase User Guide Table of Contents Introduction .................................................................................................................................................. 2 Data Model Description ................................................................................................................................ 3 Procedures for Checking Out and Checking in ArcPad Layers for Field Data Collection .............................. 4 Prepare files for check out to mobile device ............................................................................................ 6 Load the data to the GPS Unit ................................................................................................................ 11 ArcPad Instructions ..................................................................................................................................... 13 All Form Properties ................................................................................................................................. 16 Grid Properties Form* ............................................................................................................................ 16 Habitat Association Form* ...................................................................................................................... 17 Management Actions Form .................................................................................................................... 19 Milkweed*.............................................................................................................................................. -
Sierra Nevada Framework FEIS Chapter 3
table of contrents Sierra Nevada Forest Plan Amendment – Part 4.6 4.6. Vascular Plants, Bryophytes, and Fungi4.6. Fungi Introduction Part 3.1 of this chapter describes landscape-scale vegetation patterns. Part 3.2 describes the vegetative structure, function, and composition of old forest ecosystems, while Part 3.3 describes hardwood ecosystems and Part 3.4 describes aquatic, riparian, and meadow ecosystems. This part focuses on botanical diversity in the Sierra Nevada, beginning with an overview of botanical resources and then presenting a more detailed analysis of the rarest elements of the flora, the threatened, endangered, and sensitive (TES) plants. The bryophytes (mosses and liverworts), lichens, and fungi of the Sierra have been little studied in comparison to the vascular flora. In the Pacific Northwest, studies of these groups have received increased attention due to the President’s Northwest Forest Plan. New and valuable scientific data is being revealed, some of which may apply to species in the Sierra Nevada. This section presents an overview of the vascular plant flora, followed by summaries of what is generally known about bryophytes, lichens, and fungi in the Sierra Nevada. Environmental Consequences of the alternatives are only analyzed for the Threatened, Endangered, and Sensitive plants, which include vascular plants, several bryophytes, and one species of lichen. 4.6.1. Vascular plants4.6.1. plants The diversity of topography, geology, and elevation in the Sierra Nevada combine to create a remarkably diverse flora (see Section 3.1 for an overview of landscape patterns and vegetation dynamics in the Sierra Nevada). More than half of the approximately 5,000 native vascular plant species in California occur in the Sierra Nevada, despite the fact that the range contains less than 20 percent of the state’s land base (Shevock 1996). -
Phylogenetic Inferences in Prunus (Rosaceae) Using Chloroplast Ndhf and Nuclear Ribosomal ITS Sequences 1Jun WEN* 2Scott T
Journal of Systematics and Evolution 46 (3): 322–332 (2008) doi: 10.3724/SP.J.1002.2008.08050 (formerly Acta Phytotaxonomica Sinica) http://www.plantsystematics.com Phylogenetic inferences in Prunus (Rosaceae) using chloroplast ndhF and nuclear ribosomal ITS sequences 1Jun WEN* 2Scott T. BERGGREN 3Chung-Hee LEE 4Stefanie ICKERT-BOND 5Ting-Shuang YI 6Ki-Oug YOO 7Lei XIE 8Joey SHAW 9Dan POTTER 1(Department of Botany, National Museum of Natural History, MRC 166, Smithsonian Institution, Washington, DC 20013-7012, USA) 2(Department of Biology, Colorado State University, Fort Collins, CO 80523, USA) 3(Korean National Arboretum, 51-7 Jikdongni Soheur-eup Pocheon-si Gyeonggi-do, 487-821, Korea) 4(UA Museum of the North and Department of Biology and Wildlife, University of Alaska Fairbanks, Fairbanks, AK 99775-6960, USA) 5(Key Laboratory of Plant Biodiversity and Biogeography, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650204, China) 6(Division of Life Sciences, Kangwon National University, Chuncheon 200-701, Korea) 7(State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China) 8(Department of Biological and Environmental Sciences, University of Tennessee, Chattanooga, TN 37403-2598, USA) 9(Department of Plant Sciences, MS 2, University of California, Davis, CA 95616, USA) Abstract Sequences of the chloroplast ndhF gene and the nuclear ribosomal ITS regions are employed to recon- struct the phylogeny of Prunus (Rosaceae), and evaluate the classification schemes of this genus. The two data sets are congruent in that the genera Prunus s.l. and Maddenia form a monophyletic group, with Maddenia nested within Prunus. -
Herbivorous Insects and the Hawaiian Silversword Alliance: Coevolution Or Cospeciation?L
Pacific Science (1997), vol. 51, no. 4: 440-449 © 1997 by University of Hawai'i Press. All rights reserved Herbivorous Insects and the Hawaiian Silversword Alliance: Coevolution or Cospeciation?l GEORGE K. RODERICK2 ABSTRACT: Numerous groups of herbivorous insects in the Hawaiian archipelago have undergone adaptive radiations. R. C. L. Perkins collected and documented species in nearly all of these groups. In this study I tested whether patterns of host plant use by herbivorous insects can be explained by host plant history. I examined a group ofinsects in the planthopper genus Nesosydne (Hemiptera: Delphacidae) that feed on plants in the Hawaiian silversword alliance, many of which are endangered or threatened. For these Nesosydne species feeding on the silversword alliance, mitochondrial DNA sequence data revealed a statistically significant pattern of cospeciation between these insects and their hosts. These planthoppers are highly host-specific, with each species feeding on only one, or a few closely related, plant species. Patterns ofhost plant use across the plant lineage, as well as within extensive hybrid zones between members of the silversword alliance, suggest that planthopper diversification parallels host plant diversification. Data collected thus far are consis tent with, but do not directly demonstrate, reciprocal adaptation. For other herbivo rous insects associated with members of the Hawaiian silversword alliance, patterns of host plant use and evolutionary history are not yet well understood. However, cospeciation appears not to be universal. For example, endemic flies in the family Tephritidae (Diptera) are less host-specific and demonstrate host-switching. Research is under way to reveal the mechanisms associated with cospeciation and host switching for different insect groups associated with the Hawaiian silversword alliance. -
(Asteraceae) on the Canary Islands
G C A T T A C G G C A T genes Article Evolutionary Comparison of the Chloroplast Genome in the Woody Sonchus Alliance (Asteraceae) on the Canary Islands Myong-Suk Cho 1, Ji Young Yang 2, Tae-Jin Yang 3 and Seung-Chul Kim 1,* 1 Department of Biological Sciences, Sungkyunkwan University, Suwon 16419, Korea; [email protected] 2 Research Institute for Ulleung-do and Dok-do Island, Kyungpook National University, Daegu 41566, Korea; [email protected] 3 Department of Plant Science, Plant Genomics and Breeding Institute, Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul 08826, Korea; [email protected] * Correspondence: [email protected]; Tel.: +82-31-299-4499 Received: 11 February 2019; Accepted: 11 March 2019; Published: 14 March 2019 Abstract: The woody Sonchus alliance consists primarily of woody species of the genus Sonchus (subgenus Dendrosonchus; family Asteraceae). Most members of the alliance are endemic to the oceanic archipelagos in the phytogeographic region of Macaronesia. They display extensive morphological, ecological, and anatomical diversity, likely caused by the diverse habitats on islands and rapid adaptive radiation. As a premier example of adaptive radiation and insular woodiness of species endemic to oceanic islands, the alliance has been the subject of intensive evolutionary studies. While phylogenetic studies suggested that it is monophyletic and its major lineages radiated rapidly early in the evolutionary history of this group, genetic mechanisms of speciation and genomic evolution within the alliance remain to be investigated. We first attempted to address chloroplast (cp) genome evolution by conducting comparative genomic analysis of three representative endemic species (Sonchus acaulis, Sonchus canariensis, and Sonchus webbii) from the Canary Islands. -
Ventura County Plant Species of Local Concern
Checklist of Ventura County Rare Plants (Twenty-second Edition) CNPS, Rare Plant Program David L. Magney Checklist of Ventura County Rare Plants1 By David L. Magney California Native Plant Society, Rare Plant Program, Locally Rare Project Updated 4 January 2017 Ventura County is located in southern California, USA, along the east edge of the Pacific Ocean. The coastal portion occurs along the south and southwestern quarter of the County. Ventura County is bounded by Santa Barbara County on the west, Kern County on the north, Los Angeles County on the east, and the Pacific Ocean generally on the south (Figure 1, General Location Map of Ventura County). Ventura County extends north to 34.9014ºN latitude at the northwest corner of the County. The County extends westward at Rincon Creek to 119.47991ºW longitude, and eastward to 118.63233ºW longitude at the west end of the San Fernando Valley just north of Chatsworth Reservoir. The mainland portion of the County reaches southward to 34.04567ºN latitude between Solromar and Sequit Point west of Malibu. When including Anacapa and San Nicolas Islands, the southernmost extent of the County occurs at 33.21ºN latitude and the westernmost extent at 119.58ºW longitude, on the south side and west sides of San Nicolas Island, respectively. Ventura County occupies 480,996 hectares [ha] (1,188,562 acres [ac]) or 4,810 square kilometers [sq. km] (1,857 sq. miles [mi]), which includes Anacapa and San Nicolas Islands. The mainland portion of the county is 474,852 ha (1,173,380 ac), or 4,748 sq.