The Many Links Between Wnt Signaling, Planar Cell Polarity, and Cilia
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Modeling Ciliopathies: Primary Cilia in Development and Disease
CHAPTER FIVE Modeling Ciliopathies: Primary Cilia in Development and Disease Robyn J. Quinlan, Jonathan L. Tobin, and Philip L. Beales Contents 1. The Human Ciliopathies 250 2. Bardet-Biedl Syndrome 251 3. Alstro¨m Syndrome 263 4. Polycystic Kidney Disease 264 5. Nephronophthisis 265 6. Meckel Syndrome 267 7. Joubert Syndrome 268 8. Jeune Syndrome 269 9. Oral–Facial–Digital Syndrome 269 10. The Structure and Function of the Cilium 270 10.1. The structure of primary cilia 270 10.2. Intraflagellar transport 272 10.3. IFT and ciliopathies 272 11. Cilia and Development 276 11.1. Left–right determination 276 11.2. Hedgehog signaling in ciliopathies 277 11.3. Cilia and polarity 280 11.4. Cilia and cystogenesis in mammals 283 11.5. Cilia and obesity 286 12. Therapies for Cystic Disease 287 13. Concluding Remarks 289 References 292 Abstract Primary (nonmotile) cilia are currently enjoying a renaissance in light of novel ascribed functions ranging from mechanosensory to signal transduction. Their importance for key developmental pathways such as Sonic Hedgehog (Shh) and Wnt is beginning to emerge. The function of nodal cilia, for example, is vital for Molecular Medicine Unit, Institute of Child Health, University College London, London, WC1N1EH, United Kingdom Current Topics in Developmental Biology, Volume 84 # 2008 Elsevier Inc. ISSN 0070-2153, DOI: 10.1016/S0070-2153(08)00605-4 All rights reserved. 249 250 Robyn J. Quinlan et al. breaking early embryonic symmetry, Shh signaling is important for tissue morphogenesis and successful Wnt signaling for organ growth and differentia- tion. When ciliary function is perturbed, photoreceptors may die, kidney tubules develop cysts, limb digits multiply and brains form improperly. -
The Role of Primary Cilia in the Pathophysiology of Neural Tube Defects
Neurosurg Focus 33 (4):E2, 2012 The role of primary cilia in the pathophysiology of neural tube defects TIMOTHY W. VOGEL, M.D.,1 CALVIN S. CARTER, B.S.,2 KINGSLEY ABODE-IYAMAH, M.D.,3 QIHONG ZHANG, PH.D.,2 AND SHENANDOAH ROBINSON, M.D.1 1Department of Neurosurgery, Children’s Hospital Boston, Harvard Medical School, Boston, Massachusetts; and 2Graduate Program in Neuroscience, 3Department of Neurosurgery, University of Iowa, Iowa City, Iowa Neural tube defects (NTDs) are a set of disorders that occur from perturbation of normal neural development. They occur in open or closed forms anywhere along the craniospinal axis and often result from a complex interaction between environmental and genetic factors. One burgeoning area of genetics research is the effect of cilia signaling on the developing neural tube and how the disruption of primary cilia leads to the development of NTDs. Recent progress has implicated the hedgehog (Hh), wingless-type integration site family (Wnt), and planar cell polarity (PCP) pathways in primary cilia as involved in normal neural tube patterning. A set of disorders involving cilia func- tion, known as ciliopathies, offers insight into abnormal neural development. In this article, the authors discuss the common ciliopathies, such as Meckel-Gruber and Joubert syndromes, that are associated with NTDs, and review cil- ia-related signaling cascades responsible for mammalian neural tube development. Understanding the contribution of cilia in the formation of NTDs may provide greater insight into this common set of -
Cilia in Hereditary Cerebral Anomalies Sophie Thomas, Lucile Boutaud, Madeline Louise Reilly, Alexandre Benmerah
Cilia in hereditary cerebral anomalies Sophie Thomas, Lucile Boutaud, Madeline Louise Reilly, Alexandre Benmerah To cite this version: Sophie Thomas, Lucile Boutaud, Madeline Louise Reilly, Alexandre Benmerah. Cilia in hereditary cerebral anomalies. Biology of the Cell, Wiley, 2019, 10.1111/boc.201900012. inserm-02263786 HAL Id: inserm-02263786 https://www.hal.inserm.fr/inserm-02263786 Submitted on 8 Aug 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Cilia in hereditary cerebral anomalies Sophie Thomas1,*, Lucile Boutaud1, Madeline Louise Reilly2,3, and Alexandre Benmerah2,* 1Laboratory of Embryology and Genetics of Human Malformation, INSERM UMR 1163, Paris Descartes University, Imagine Institute, 75015 Paris, France. 2Laboratory of Hereditary Kidney Diseases, INSERM UMR 1163, Paris Descartes University, Imagine Institute, 75015 Paris, France. 3Paris Diderot University, 75013 Paris, France. * To whom correspondence should be addressed: Alexandre Benmerah, Institut Imagine, 24 boulevard du Montparnasse, 75015 PARIS, France. Tel: +33 1 42 75 43 44, fax: +33 1 42 75 42 25, email: [email protected] Sophie Thomas, Institut Imagine, 24 boulevard du Montparnasse, 75015 PARIS, France. Tel : +33 +33 1 42 75 43 10, fax: +33 1 42 75 42 25, email: [email protected] 1 Abstract: Ciliopathies are complex genetic multisystem disorders causally related to abnormal assembly or function of motile or non-motile cilia. -
Primary Cilia in the Developing and Mature Brain
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Neuron Review Primary Cilia in the Developing and Mature Brain Alicia Guemez-Gamboa,1 Nicole G. Coufal,1 and Joseph G. Gleeson1,* 1Howard Hughes Medical Institute, Department of Neurosciences, University of California, San Diego, La Jolla, CA 92093, USA *Correspondence: [email protected] http://dx.doi.org/10.1016/j.neuron.2014.04.024 Primary cilia were the largely neglected nonmotile counterparts of their better-known cousin, the motile cilia. For years these nonmotile cilia were considered evolutionary remnants of little consequence to cellular func- tion. Fast forward 10 years and we now recognize primary cilia as key integrators of extracellular ligand- based signaling and cellular polarity, which regulate neuronal cell fate, migration, differentiation, as well as a host of adult behaviors. Important future questions will focus on structure-function relationships, their roles in signaling and disease and as areas of target for treatments. Introduction son, 2011). However, cilia still form in cells with mutations in The role of primary cilia are well known in special sensory cells these cilia genes, although they may be altered morphologically. involving hearing, vision, taste, and olfaction as the location of Therefore, it is important to differentiate between the role of a stimulus transduction, but their identification in other neural specific gene and the role of the entire cilium in a cell. By study- types came as somewhat of a surprise. Evidence for primary cilia ing ciliopathies, we can begin to understand the key roles of cilia in the vertebrate nervous system was first documented during in development and homeostasis, but we must recognize that electron microscopic examination of brain sections. -
Investigating Nephronophthisis Using a Novel Murine And
Investigating nephronophthisis using a novel murine and cell model. Ann Marie Hynes A thesis submitted for the Degree of Doctor of Philosophy Institute of Genetic Medicine, Newcastle University, September 2013 i Abstract Nephronophthisis (NPHP) is a major cause of pediatric renal failure. Currently there is little understanding of the aetiology of the disease. In order to identify the molecular events leading to NPHP, we have created a novel mutant mouse strain containing a truncating mutation in the Cep290 gene. Patients with mutations in CEP290 present with a ciliopathy phenotype that includes retinal dystrophy, cerebellum defects and NPHP. Characterisation of Cep290LacZ/LacZ mice confirms that they display all the features of the human condition. Microarray analysis of newborn kidney tissue was used to explore initiating events leading to NPHP. Ciliopathies have recently been associated with either disrupted Wingless integrated (Wnt) or sonic hedgehog (Shh) signaling. We show that mutant kidneys display abnormal Shh signaling in the absence of Wnt signaling abnormalities. Primary cell cultures of collecting duct (CDT) cells (isolated from Cep290LacZ/LacZ mice and wild-type litter mates crossed with the “immorto” mouse) were established and characterised. CDT cells expressed the mineral corticoid receptor (MR) and the epithelial sodium channel (ENaC) alpha subunit. The CDT cell lines formed epithelial layers and formed tubules when maintained in 3D culture media. Cep290LacZ/LacZ CDT cells displayed ciliogenesis abnormalities as well as abnormal spheroids with loss of lumen when grown in 3D culture. Pharmacological activation of Shh signaling (purmorphamine) partially rescues the spheroid and ciliogenesis defects in Cep290LacZ/LacZ CDT cells. This implicates abnormal Shh signaling in the onset of NPHP and suggests that targeted treatment of Shh antagonists have therapeutic potential. -
Unravelling the Cell Adhesion Defect in Meckel-Gruber Syndrome
Unravelling the Cell Adhesion Defect in Meckel-Gruber Syndrome Submitted by Benjamin Roland Alexander Meadows as a thesis for the degree of Doctor of Philosophy in Biological Sciences in September 2016 This thesis is available for Library use on the understanding that it is copyright material and that no quotation from the thesis may be published without proper acknowledgement. I certify that all material in this thesis which is not my own work has been identified and that no material has previously been submitted and approved for the award of a degree by this or any other University. ……………………………………………………………… 1 2 Acknowledgements The first people who must be thanked are my fellow Dawe group members Kate McIntosh, Kat Curry, and half of Holly Hardy, as well as all past group members and Helen herself, who has always been a supportive and patient supervisor with a worryingly encyclopaedic knowledge of the human proteome. Some (in the end, distressingly small) parts of this project would not have been possible without my western blot consultancy team, including senior western blot consultant Joe Costello and junior consultants Afsoon Sadeghi-Azadi, Jack Chen, Luis Godinho, Tina Schrader, Stacey Scott, Lucy Green, and Lizzy Anderson. James Wakefield is thanked for improvising a protocol for actin co- sedimentation out of almost thin air. Most surprisingly, it worked. Special thanks are due to the many undergraduates who have contributed to this project, without whose hard work many an n would be low: Beth Hickton, Grace Howells, Annie Toynbee, Alex Oldfield, Leonie Hawksley, and Georgie McDonald. Peter Splatt and Christian Hacker are thanked for their help with electron microscopy. -
The Role of Primary Cilia in the Pathophysiology of Neural Tube Defects
Neurosurg Focus 33 (4):E2, 2012 The role of primary cilia in the pathophysiology of neural tube defects TIMOTHY W. VOGEL, M.D.,1 CALVIN S. CARTER, B.S.,2 KINGSLEY ABODE-IYAMAH, M.D.,3 QIHONG ZHANG, PH.D.,2 AND SHENANDOAH ROBINSON, M.D.1 1Department of Neurosurgery, Children’s Hospital Boston, Harvard Medical School, Boston, Massachusetts; and 2Graduate Program in Neuroscience, 3Department of Neurosurgery, University of Iowa, Iowa City, Iowa Neural tube defects (NTDs) are a set of disorders that occur from perturbation of normal neural development. They occur in open or closed forms anywhere along the craniospinal axis and often result from a complex interaction between environmental and genetic factors. One burgeoning area of genetics research is the effect of cilia signaling on the developing neural tube and how the disruption of primary cilia leads to the development of NTDs. Recent progress has implicated the hedgehog (Hh), wingless-type integration site family (Wnt), and planar cell polarity (PCP) pathways in primary cilia as involved in normal neural tube patterning. A set of disorders involving cilia func- tion, known as ciliopathies, offers insight into abnormal neural development. In this article, the authors discuss the common ciliopathies, such as Meckel-Gruber and Joubert syndromes, that are associated with NTDs, and review cil- ia-related signaling cascades responsible for mammalian neural tube development. Understanding the contribution of cilia in the formation of NTDs may provide greater insight into this common set of -
Downregulating Hedgehog Signaling Reduces Renal Cystogenic Potential of Mouse Models
BASIC RESEARCH www.jasn.org Downregulating Hedgehog Signaling Reduces Renal Cystogenic Potential of Mouse Models † † Pamela V. Tran,* George C. Talbott,* Annick Turbe-Doan,* Damon T. Jacobs, † † † Michael P. Schonfeld, Luciane M. Silva, Anindita Chatterjee, Mary Prysak,* † ‡ Bailey A. Allard, and David R. Beier* *Genetics Division, Brigham and Women’s Hospital, Harvard Medical School, Boston, Massachusetts; †Department of Anatomy and Cell Biology and the Kidney Institute, University of Kansas Medical Center, Kansas City, Kansas; and ‡Center for Developmental Biology and Regenerative Medicine, Seattle Children’s Research Institute, Seattle, Washington ABSTRACT Renal cystic diseases are a leading cause of renal failure. Mutations associated with renal cystic diseases reside in genes encoding proteins that localize to primary cilia. These cystoproteins can disrupt ciliary structure or cilia-mediated signaling, although molecular mechanisms connecting cilia function to renal cystogenesis remain unclear. The ciliary gene, Thm1(Ttc21b), negatively regulates Hedgehog signaling and is most commonly mutated in ciliopathies. We report that loss of murine Thm1 causes cystic kidney disease, with persistent proliferation of renal cells, elevated cAMP levels, and enhanced expression of Hedgehog signaling genes. Notably, the cAMP-mediated cystogenic potential of Thm1-null kidney explants was reduced by genetically deleting Gli2, a major transcriptional activator of the Hedgehog pathway, or by culturing with small molecule Hedgehog inhibitors. These Hedgehog inhibitors acted independently of protein kinase A and Wnt inhibitors. Furthermore, simultaneous deletion of Gli2 atten- uated the renal cystic disease associated with deletion of Thm1. Finally, transcripts of Hedgehog target genes increased in cystic kidneys of two other orthologous mouse mutants, jck and Pkd1, and Hedgehog inhibitors reduced cystogenesis in jck and Pkd1 cultured kidneys. -
The Nonmotile Ciliopathies Jonathan L
REVIEW The nonmotile ciliopathies Jonathan L. Tobin, PhD,1 and Philip L. Beales, BSc, MD, FRCP2 Abstract: Over the last 5 years, disorders of nonmotile cilia have come polycystic kidney disease (ADPKD)] to 1 in 150,000), the study of age and their study has contributed immeasurably to our understand- of ciliopathies has given rise to an important and dynamic new ing of cell biology and human genetics. This review summarizes the field of biology, which in turn is revealing previously unrecog- main features of the ciliopathies, their underlying genetics, and the nized cellular phenomena. Understanding these diseases has functions of the proteins involved. We describe some of the key findings been helped enormously by basic research into ciliated organ- in the field, including new animal models, the role of ciliopathy proteins isms such as the unicellular alga Chlamydomonas reinhardtii in signaling pathways and development, and the unusual genetics of and the flat-worm, Caenorhabditis elegans. The ciliopathies these diseases. We also discuss the therapeutic potential for these have, in return, shed light on the functional importance of cilia diseases and finally, discuss important future work that will extend our and their proteins in signaling and development. As such, the understanding of this fascinating organelle and its associated study of ciliopathies is a perfect example of how basic science pathologies. Genet Med 2009:11(6):386–402. can be used to understand human disease, and vice versa. The ciliopathies cause multisystem pathology, resulting in Key Words: ciliopathy, Bardet-Biedl, cilia, nonmotile, genetic disease very low quality of life and early death for many patients. -
Human Myelomeningocele Risk and Ultra-Rare Deleterious Variants In
www.nature.com/scientificreports OPEN Human myelomeningocele risk and ultra‑rare deleterious variants in genes associated with cilium, WNT‑signaling, ECM, cytoskeleton and cell migration K. S. Au1*, L. Hebert1, P. Hillman1, C. Baker1,6, M. R. Brown2, D.‑K. Kim2, K. Soldano3, M. Garrett3, A. Ashley‑Koch3, S. Lee4,5, J. Gleeson4,5, J. E. Hixson2, A. C. Morrison2 & H. Northrup1 Myelomeningocele (MMC) afects one in 1000 newborns annually worldwide and each surviving child faces tremendous lifetime medical and caregiving burdens. Both genetic and environmental factors contribute to disease risk but the mechanism is unclear. This study examined 506 MMC subjects for ultra‑rare deleterious variants (URDVs, absent in gnomAD v2.1.1 controls that have Combined Annotation Dependent Depletion score ≥ 20) in candidate genes either known to cause abnormal neural tube closure in animals or previously associated with human MMC in the current study cohort. Approximately 70% of the study subjects carried one to nine URDVs among 302 candidate genes. Half of the study subjects carried heterozygous URDVs in multiple genes involved in the structure and/or function of cilium, cytoskeleton, extracellular matrix, WNT signaling, and/or cell migration. Another 20% of the study subjects carried heterozygous URDVs in candidate genes associated with gene transcription regulation, folate metabolism, or glucose metabolism. Presence of URDVs in the candidate genes involving these biological function groups may elevate the risk of developing myelomeningocele in the study cohort. Successful neural tube formation relies on a series of orchestrated biological processes to facilitate convergent extension of neural ectodermal cells (NE) on the neural plate. -
Rare Disease Registries in Europe
January 2015 Rare Disease Registries in Europe www.orpha.net Table of contents Methodology 3 List of rare diseases that are covered by the listed registries 4 Summary 13 1- Distribution of registries by country 13 2- Distribution of registries by coverage 14 3- Distribution of registries by affiliation 14 Distribution of registries by country 15 European registries 38 International registries 41 Orphanet Report Series - Rare Disease Registries in Europe - January 2015 2 http://www.orpha.net/orphacom/cahiers/docs/GB/Registries.pdf Methodology Patient registries and databases constitute key instruments to develop clinical research in the field of rare diseases (RD), to improve patient care and healthcare planning. They are the only way to pool data in order to achieve a sufficient sample size for epidemiological and/or clinical research. They are vital to assess the feasibility of clinical trials, to facilitate the planning of appropriate clinical trials and to support the enrolment of patients. Registries of patients treated with orphan drugs are particularly relevant as they allow the gathering of evidence on the effectiveness of the treatment and on its possible side effects, keeping in mind that marketing authorisation is usually granted at a time when evidence is still limited although already somewhat convincing. This report gather the information collected by Orphanet so far, regarding systematic collections of data for a specific disease or a group of diseases. Cancer registries are listed only if they belong to the network RARECARE or focus on a rare form of cancer. The report includes data about EU countries and surrounding countries participating to the Orphanet consortium. -
Ciliopathies: Primary Cilia and Signaling Pathways in Mammalian Development
8 Ciliopathies: Primary Cilia and Signaling Pathways in Mammalian Development Carmen Carrascosa Romero1, José Luis Guerrero Solano2 and Carlos De Cabo De La Vega3 1Neuropediatrics, 2Neurophsyology and 3Neuropsychopharmacology Units, Albacete General Hospital Spain 1. Introduction 1.1 Ciliopathies, an emerging class of human genetic diseases The physiological role of motile cilia or flagella in cell locomotion, sexual reproduction and fluid movements is well known. In 1898, the Swiss anatomist KW Zimmerman first described cilia on the surface of mammalian cells, for which he suggested a sensory role. His findings were largely ignored until the late 1960s, when Wheatley, using the electron microscope, stumbled upon a properly sized bubble in his histological preparation, verifying it as the cilium described by Zimmerman 63 years earlier[1]. Although it became known that all cells, from green alga Chlamydomonas to human cells – especially kidney cells– possessed a nonmotile cilium, it was initially considered a vestigial structure with no clear function. Recent discoveries have assigned novel functions to primary (nonmotile) cilia, ranging from mechanosensory in maintaining cellular homeostasis, to participation in signal transduction pathways that regulate intracellular Ca2+levels. Furthermore, the cilium is now emerging as an essential organelle in morphogenesis, important to key developmental pathways such as Sonic Hedgehog (Shh) and Wnt (planar cell polarity (PCP) pathways). The function of nodal cilia, for example, is vital for breaking early embryonic symmetry, Shh signaling is important for tissue morphogenesis and successful Wnt signaling for organ growth and differentiation. Defects in cilia formation or function have profound effects on anatomical development and the physiology of multiple organ systems such as death of photoreceptors, kidney tubule cysts, extra limb digits and brain malformation [2, 3].