Havelock Fine Scale Monitoring 2017
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
(Gastropoda: Batillariidae) from Elkhorn Slough, California, USA
Mitochondrial DNA Part B Resources ISSN: (Print) 2380-2359 (Online) Journal homepage: https://www.tandfonline.com/loi/tmdn20 The complete mitogenome of the invasive Japanese mud snail Batillaria attramentaria (Gastropoda: Batillariidae) from Elkhorn Slough, California, USA Hartnell College Genomics Group, Paulina Andrade, Lisbeth Arreola, Melissa Belnas, Estefania Bland, Araceli Castillo, Omar Cisneros, Valentin Contreras, Celeste Diaz, Kevin T. Do, Carlos Donate, Estevan Espinoza, Nathan Frater, Garry G. Gabriel, Eric A. Gomez, Gino F. Gonzalez, Myrka Gonzalez, Paola Guido, Dylan Guidotti, Mishell Guzman Espinoza, Ivan Haro, Javier Hernandez Lopez, Caden E. Hernandez, Karina Hernandez, Jazmin A. Hernandez-Salazar, Jeffery R. Hughey, Héctor Jácome-Sáenz, Luis A. Jimenez, Eli R. Kallison, Mylisa S. King, Luis J. Lazaro, Feifei Zhai Lorenzo, Isaac Madrigal, Savannah Madruga, Adrian J. Maldonado, Alexander M. Medina, Marcela Mendez-Molina, Ali Mendez, David Murillo Martinez, David Orozco, Juan Orozco, Ulises Ortiz, Jennifer M. Pantoja, Alejandra N. Ponce, Angel R. Ramirez, Israel Rangel, Eliza Rojas, Adriana Roque, Beatriz Rosas, Colt Rubbo, Justin A. Saldana, Elian Sanchez, Alicia Steinhardt, Maria O. Taveras Dina, Judith Torres, Silvestre Valdez-Mata, Valeria Vargas, Paola Vazquez, Michelle M. Vazquez, Irene Vidales, Frances L. Wong, Christian S. Zagal, Santiago Zamora & Jesus Zepeda Amador To cite this article: Hartnell College Genomics Group, Paulina Andrade, Lisbeth Arreola, Melissa Belnas, Estefania Bland, Araceli Castillo, Omar Cisneros, Valentin Contreras, Celeste Diaz, Kevin T. Do, Carlos Donate, Estevan Espinoza, Nathan Frater, Garry G. Gabriel, Eric A. Gomez, Gino F. Gonzalez, Myrka Gonzalez, Paola Guido, Dylan Guidotti, Mishell Guzman Espinoza, Ivan Haro, Javier Hernandez Lopez, Caden E. Hernandez, Karina Hernandez, Jazmin A. -
Shell Classification – Using Family Plates
Shell Classification USING FAMILY PLATES YEAR SEVEN STUDENTS Introduction In the following activity you and your class can use the same techniques as Queensland Museum The Queensland Museum Network has about scientists to classify organisms. 2.5 million biological specimens, and these items form the Biodiversity collections. Most specimens are from Activity: Identifying Queensland shells by family. Queensland’s terrestrial and marine provinces, but These 20 plates show common Queensland shells some are from adjacent Indo-Pacific regions. A smaller from 38 different families, and can be used for a range number of exotic species have also been acquired for of activities both in and outside the classroom. comparative purposes. The collection steadily grows Possible uses of this resource include: as our inventory of the region’s natural resources becomes more comprehensive. • students finding shells and identifying what family they belong to This collection helps scientists: • students determining what features shells in each • identify and name species family share • understand biodiversity in Australia and around • students comparing families to see how they differ. the world All shells shown on the following plates are from the • study evolution, connectivity and dispersal Queensland Museum Biodiversity Collection. throughout the Indo-Pacific • keep track of invasive and exotic species. Many of the scientists who work at the Museum specialise in taxonomy, the science of describing and naming species. In fact, Queensland Museum scientists -
Bering Sea Marine Invasive Species Assessment Alaska Center for Conservation Science
Bering Sea Marine Invasive Species Assessment Alaska Center for Conservation Science Scientific Name: Batillaria attramentaria Phylum Mollusca Common Name Japanese false cerith Class Gastropoda Order Neotaenioglossa Family Batillariidae Z:\GAP\NPRB Marine Invasives\NPRB_DB\SppMaps\BATATT.png 153 Final Rank 46.00 Data Deficiency: 12.50 Category Scores and Data Deficiencies Total Data Deficient Category Score Possible Points Distribution and Habitat: 12.25 23 7.50 Anthropogenic Influence: 6 10 0 Biological Characteristics: 17 25 5.00 Impacts: 5 30 0 Figure 1. Occurrence records for non-native species, and their geographic proximity to the Bering Sea. Ecoregions are based on the classification system by Spalding et al. (2007). Totals: 40.25 87.50 12.50 Occurrence record data source(s): NEMESIS and NAS databases. General Biological Information Tolerances and Thresholds Minimum Temperature (°C) -2 Minimum Salinity (ppt) 7 Maximum Temperature (°C) 40 Maximum Salinity (ppt) 33 Minimum Reproductive Temperature (°C) Minimum Reproductive Salinity (ppt) Maximum Reproductive Temperature (°C) Maximum Reproductive Salinity (ppt) Additional Notes Size of adult shells ranges from 10 to 34 mm. The shell is usually gray-brown, often with a white band below the suture, but can range from light brown to dirty-black. Historically introduced with the Pacific oyster, Crassostrea gigas, but in recent years, it has been found in areas where oysters are not cultivated. Nevertheless, its spread has been attributed to anthropogenic vectors rather than natural dispersal. Report updated on Wednesday, December 06, 2017 Page 1 of 13 1. Distribution and Habitat 1.1 Survival requirements - Water temperature Choice: Considerable overlap – A large area (>75%) of the Bering Sea has temperatures suitable for year-round survival Score: A 3.75 of High uncertainty? 3.75 Ranking Rationale: Background Information: Temperatures required for year-round survival occur over a large Based on its geographic distribution, B. -
THE LISTING of PHILIPPINE MARINE MOLLUSKS Guido T
August 2017 Guido T. Poppe A LISTING OF PHILIPPINE MARINE MOLLUSKS - V1.00 THE LISTING OF PHILIPPINE MARINE MOLLUSKS Guido T. Poppe INTRODUCTION The publication of Philippine Marine Mollusks, Volumes 1 to 4 has been a revelation to the conchological community. Apart from being the delight of collectors, the PMM started a new way of layout and publishing - followed today by many authors. Internet technology has allowed more than 50 experts worldwide to work on the collection that forms the base of the 4 PMM books. This expertise, together with modern means of identification has allowed a quality in determinations which is unique in books covering a geographical area. Our Volume 1 was published only 9 years ago: in 2008. Since that time “a lot” has changed. Finally, after almost two decades, the digital world has been embraced by the scientific community, and a new generation of young scientists appeared, well acquainted with text processors, internet communication and digital photographic skills. Museums all over the planet start putting the holotypes online – a still ongoing process – which saves taxonomists from huge confusion and “guessing” about how animals look like. Initiatives as Biodiversity Heritage Library made accessible huge libraries to many thousands of biologists who, without that, were not able to publish properly. The process of all these technological revolutions is ongoing and improves taxonomy and nomenclature in a way which is unprecedented. All this caused an acceleration in the nomenclatural field: both in quantity and in quality of expertise and fieldwork. The above changes are not without huge problematics. Many studies are carried out on the wide diversity of these problems and even books are written on the subject. -
Estuary Monitoring Toolkit Turning the Tide 2006
An estuaries toolkit for New Zealand communities Gretchen Robertson & Monica Peters Published by the TAIERI Trust, 2006 Cover Artwork by Theresa Reihana - www.maoriart.com Illustrations by Monica Peters Graphic Design by Mark Jackson - www.ecoimage.co.nz This work is copyright. The copying, adaptation, or issuing of this work to the public on a non-profit basis is welcomed. No other use of this work is permitted without the prior consent of the copyright holder(s). The TAIERI Trust acknowledges the Minister for the Environment’s Sustainable Management Fund, which is administered by the Ministry for the Environment. The Ministry for the Environment does not support or endorse the content of this publication in any way. I Acknowledgements Thank you to the Waikouaiti-Karitane River and Estuary Care Group for your patience in trialing early drafts of the monitoring section. To Dr Barry Robertson and Leigh Stevens of Wriggle Coastal Management, your willingness to work with us to develop user-friendly tools for estuarine monitoring and assessment have transformed this kit from an idea to a reality. To Mark Jackson for his wonderful graphic design skills. To the Cawthron Institute for providing images and advice, especially Rod Asher for his species identification knowledge. To employees of the New Zealand Landcare Trust for providing information about community estuary groups around New Zealand. To the Manawatu Estuary Trust for providing us with inspiration and a copy of your wonderful CD. To the Auckland Regional Council and Christchurch City Council for information about your estuarine programmes. To NIWA for providing inspiration through your mangrove based ‘Estuary Monitoring by Communities’ document. -
Molecular Phylogenetic Relationship of Thiaridean Genus Tarebia Lineate
Journal of Entomology and Zoology Studies 2017; 5(3): 1489-1492 E-ISSN: 2320-7078 P-ISSN: 2349-6800 Molecular phylogenetic relationship of Thiaridean JEZS 2017; 5(3): 1489-1492 © 2017 JEZS genus Tarebia lineate (Gastropoda: Cerithioidea) Received: 23-03-2017 Accepted: 24-04-2017 as determined by partial COI sequences Chittaranjan Jena Department of Biotechnology, Vignan’s University (VFSTRU), Chittaranjan Jena and Krupanidhi Srirama Vadlamudi, Andhra Pradesh, India Abstract An attempt was made to investigate phylogenetic affinities of the genus Tarebia lineata sampled from Krupanidhi Srirama the Indian subcontinent using partial mitochondrial COI gene sequence. The amplified partial mt-COI Department of Biotechnology, gene sequence using universal primers, LCO1490 and HCO2198 resulted into ~700 base pair DNA Vignan’s University (VFSTRU), Vadlamudi, Andhra Pradesh, fragment. The obtained nucleotide sequence of partial COI gene of T. lineata was submitted to BLAST India analysis and 36 close relative sequences of the chosen genera, Cerithioidea were derived. Maximum likelihood (ML) algorithm in-biuilt in RAxML software tool was used to estimate phylogenetic their affinities. The present analysis revealed that a single assemblage of the family Thiaridae supported by a bootstrap value of 96% is earmarked at the base of the derived cladogram as a cluster and emerged as a sister group with another four Cerithioideans. Our dataset brought add-on value to the current taxonomy of Thiaridae of the clade Sorbeconcha by clustering them as sister and non-sister groups indicating the virtual relations. Out of seven genera, Tarebia and Melanoides formed as primary and secondary clusters within the Thiaridae. The monophyly of Thiaridae and its conspecifics were depicted in the cladogram. -
8. the Mollusk Fauna of the Monte Postale
Rendiconti della Società Paleontologica Italiana, 4, 2014, pp. 89-94 Excursion guidebook CBEP 2014-EPPC 2014-EAVP 2014-Taphos 2014 Conferences The Bolca Fossil-Lagerstätten: A window into the Eocene World (editors C.A. Papazzoni, L. Giusberti, G. Carnevale, G. Roghi, D. Bassi & R. Zorzin) 8. The mollusk fauna of the Monte Postale Stefano DOMINICI S. Dominici, Museo di Storia Naturale, Università di Firenze, Via La Pira 4, I-50121 Firenze, Italy; !$`"$ Fossil marine mollusks from Monte Postale, about one mile NE of Bolca (Verona and Vicenza Provinces) and 300 m N of the “Pesciara” (see the map in Papazzoni & Trevisani, 2006), were collected and catalogued at least since the 18th`[ seen, in the second decade of the 19th century, as means to date the rocks, and the already O"~P`[` geologists. In 1823, on the footsteps of Alberto Fortis (1778), Alexandre Brongniart drew stratigraphic sections and collected fossils in the Vicenza province, assigning the Bolca and Roncà invertebrates to one and the same geological interval. In the newly introduced 5~`[` Paris Basin. This meant to Brongniart that they belonged to the older Tertiary, and were distinct from the fossil shells described by Giambattista Brocchi in 1814, typifying the younger Tertiary (Rudwick, 2005). “I can relate the calcareous-trappic terrains of Northern Italy to the lower formation, the most ancient of the upper sediment [i.e., the Tertiary]. I’m struck by the analogy between these two terrains, their utter similarity under almost any aspect. Nothing of the lower terrains of the Parisian limestone is missing in Bolca, Roncà, etc. -
Gastropod Fauna of the Cameroonian Coasts
Helgol Mar Res (1999) 53:129–140 © Springer-Verlag and AWI 1999 ORIGINAL ARTICLE Klaus Bandel · Thorsten Kowalke Gastropod fauna of the Cameroonian coasts Received: 15 January 1999 / Accepted: 26 July 1999 Abstract Eighteen species of gastropods were encoun- flats become exposed. During high tide, most of the tered living near and within the large coastal swamps, mangrove is flooded up to the point where the influence mangrove forests, intertidal flats and the rocky shore of of salty water ends, and the flora is that of a freshwater the Cameroonian coast of the Atlantic Ocean. These re- regime. present members of the subclasses Neritimorpha, With the influence of brackish water, the number of Caenogastropoda, and Heterostropha. Within the Neriti- individuals of gastropod fauna increases as well as the morpha, representatives of the genera Nerita, Neritina, number of species, and changes in composition occur. and Neritilia could be distinguished by their radula Upstream of Douala harbour and on the flats that lead anatomy and ecology. Within the Caenogastropoda, rep- to the mangrove forest next to Douala airport the beach resentatives of the families Potamididae with Tympano- is covered with much driftwood and rubbish that lies on tonos and Planaxidae with Angiola are characterized by the landward side of the mangrove forest. Here, Me- their early ontogeny and ecology. The Pachymelaniidae lampus liberianus and Neritina rubricata are found as are recognized as an independent group and are intro- well as the Pachymelania fusca variety with granulated duced as a new family within the Cerithioidea. Littorini- sculpture that closely resembles Melanoides tubercu- morpha with Littorina, Assiminea and Potamopyrgus lata in shell shape. -
Smithsonian Miscellaneous Collections
SMITHSONIAN MISCELLANEOUS COLLECTIOXS. 227 AEEANGEMENT FAMILIES OF MOLLUSKS. PREPARED FOR THE SMITHSONIAN INSTITUTION BY THEODORE GILL, M. D., Ph.D. WASHINGTON: PUBLISHED BY THE SMITHSONIAN INSTITUTION, FEBRUARY, 1871. ^^1 I ADVERTISEMENT. The following list has been prepared by Dr. Theodore Gill, at the request of the Smithsonian Institution, for the purpose of facilitating the arrangement and classification of the Mollusks and Shells of the National Museum ; and as frequent applica- tions for such a list have been received by the Institution, it has been thought advisable to publish it for more extended use. JOSEPH HENRY, Secretary S. I. Smithsonian Institution, Washington, January, 1871 ACCEPTED FOR PUBLICATION, FEBRUARY 28, 1870. (iii ) CONTENTS. VI PAGE Order 17. Monomyaria . 21 " 18. Rudista , 22 Sub-Branch Molluscoidea . 23 Class Tunicata , 23 Order 19. Saccobranchia . 23 " 20. Dactjlobranchia , 24 " 21. Taeniobranchia , 24 " 22. Larvalia , 24 Class Braehiopoda . 25 Order 23. Arthropomata , 25 " . 24. Lyopomata , 26 Class Polyzoa .... 27 Order 25. Phylactolsemata . 27 " 26. Gymnolseraata . 27 " 27. Rhabdopleurse 30 III. List op Authors referred to 31 IV. Index 45 OTRODUCTIO^. OBJECTS. The want of a complete and consistent list of the principal subdivisions of the mollusks having been experienced for some time, and such a list being at length imperatively needed for the arrangement of the collections of the Smithsonian Institution, the present arrangement has been compiled for that purpose. It must be considered simply as a provisional list, embracing the results of the most recent and approved researches into the systematic relations and anatomy of those animals, but from which innova- tions and peculiar views, affecting materially the classification, have been excluded. -
Panpulmonata: Amphibolidae) in South-Eastern Australia
Biodiversity Data Journal 8: e54724 doi: 10.3897/BDJ.8.e54724 Research Article Genetic assessment of the variation and distribution of the species of Salinator (Panpulmonata: Amphibolidae) in south-eastern Australia Donald Colgan‡, Hugo Lumsdaine‡ ‡ The Australian Museum, Sydney, Australia Corresponding author: Donald Colgan ([email protected]) Academic editor: Cristian Altaba Received: 26 May 2020 | Accepted: 16 Sep 2020 | Published: 29 Oct 2020 Citation: Colgan D, Lumsdaine H (2020) Genetic assessment of the variation and distribution of the species of Salinator (Panpulmonata: Amphibolidae) in south-eastern Australia. Biodiversity Data Journal 8: e54724. https://doi.org/10.3897/BDJ.8.e54724 Abstract Amphibolidae is one of the most abundant families of gastropods in estuarine environments of south-eastern Australia. However, the range limits of the species of Salinator, one of the family’s two genera in the region, remain unclear partly due to uncertainty of identifications based solely on shell morphology. Insufficient data have been collected to address questions regarding the genetic variability of any of the species of Salinator. Here, DNA sequences from a segment of the cytochrome c oxidase subunit I and 28S ribosomal RNA genes were collected to investigate the distribution and variation of the three Salinator species in the region, these being S. fragilis, S. rhamphidia and S. tecta. The results demonstrate a large range extension in S. rhamphidia and suggest that S. tecta may have limited distribution in Tasmania. In contrast to previously-studied estuarine Mollusca in the south-eastern coasts of the mainland and Tasmania, S. rhamphidia has regional differentiation. There is evidence of genetic disequilibrium within S. -
Utility of H3-Genesequences for Phylogenetic Reconstruction – a Case Study of Heterobranch Gastropoda –*
Bonner zoologische Beiträge Band 55 (2006) Heft 3/4 Seiten 191–202 Bonn, November 2007 Utility of H3-Genesequences for phylogenetic reconstruction – a case study of heterobranch Gastropoda –* Angela DINAPOLI1), Ceyhun TAMER1), Susanne FRANSSEN1), Lisha NADUVILEZHATH1) & Annette KLUSSMANN-KOLB1) 1)Department of Ecology, Evolution and Diversity – Phylogeny and Systematics, J. W. Goethe-University, Frankfurt am Main, Germany *Paper presented to the 2nd International Workshop on Opisthobranchia, ZFMK, Bonn, Germany, September 20th to 22nd, 2006 Abstract. In the present study we assessed the utility of H3-Genesequences for phylogenetic reconstruction of the He- terobranchia (Mollusca, Gastropoda). Therefore histone H3 data were collected for 49 species including most of the ma- jor groups. The sequence alignment provided a total of 246 sites of which 105 were variable and 96 parsimony informa- tive. Twenty-four (of 82) first base positions were variable as were 78 of the third base positions but only 3 of the se- cond base positions. H3 analyses showed a high codon usage bias. The consistency index was low (0,210) and a substitution saturation was observed in the 3r d codon position. The alignment with the translation of the H3 DNA sequences to amino-acid sequences had no sites that were parsimony-informative within the Heterobranchia. Phylogenetic trees were reconstructed using maximum parsimony, maximum likelihood and Bayesian methodologies. Nodilittorina unifasciata was used as outgroup. The resolution of the deeper nodes was limited in this molecular study. The data themselves were not sufficient to clar- ify phylogenetic relationships within Heterobranchia. Neither the monophyly of the Euthyneura nor a step-by-step evo- lution by the “basal” groups was supported. -
Caenogastropoda
13 Caenogastropoda Winston F. Ponder, Donald J. Colgan, John M. Healy, Alexander Nützel, Luiz R. L. Simone, and Ellen E. Strong Caenogastropods comprise about 60% of living Many caenogastropods are well-known gastropod species and include a large number marine snails and include the Littorinidae (peri- of ecologically and commercially important winkles), Cypraeidae (cowries), Cerithiidae (creep- marine families. They have undergone an ers), Calyptraeidae (slipper limpets), Tonnidae extraordinary adaptive radiation, resulting in (tuns), Cassidae (helmet shells), Ranellidae (tri- considerable morphological, ecological, physi- tons), Strombidae (strombs), Naticidae (moon ological, and behavioral diversity. There is a snails), Muricidae (rock shells, oyster drills, etc.), wide array of often convergent shell morpholo- Volutidae (balers, etc.), Mitridae (miters), Buccin- gies (Figure 13.1), with the typically coiled shell idae (whelks), Terebridae (augers), and Conidae being tall-spired to globose or fl attened, with (cones). There are also well-known freshwater some uncoiled or limpet-like and others with families such as the Viviparidae, Thiaridae, and the shells reduced or, rarely, lost. There are Hydrobiidae and a few terrestrial groups, nota- also considerable modifi cations to the head- bly the Cyclophoroidea. foot and mantle through the group (Figure 13.2) Although there are no reliable estimates and major dietary specializations. It is our aim of named species, living caenogastropods are in this chapter to review the phylogeny of this one of the most diverse metazoan clades. Most group, with emphasis on the areas of expertise families are marine, and many (e.g., Strombidae, of the authors. Cypraeidae, Ovulidae, Cerithiopsidae, Triphori- The fi rst records of undisputed caenogastro- dae, Olividae, Mitridae, Costellariidae, Tereb- pods are from the middle and upper Paleozoic, ridae, Turridae, Conidae) have large numbers and there were signifi cant radiations during the of tropical taxa.