Hedgehog Signaling Pathway and Lung Cancer
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Loss of the PTCH1 Tumor Suppressor Defines a New
Banerjee et al. J Transl Med (2019) 17:246 https://doi.org/10.1186/s12967-019-1995-z Journal of Translational Medicine RESEARCH Open Access Loss of the PTCH1 tumor suppressor defnes a new subset of plexiform fbromyxoma Sudeep Banerjee1,2, Christopher L. Corless3, Markku M. Miettinen4, Sangkyu Noh1, Rowan Ustoy1, Jessica L. Davis3, Chih‑Min Tang1, Mayra Yebra1, Adam M. Burgoyne5 and Jason K. Sicklick1* Abstract Background: Plexiform fbromyxoma (PF) is a rare gastric tumor often confused with gastrointestinal stromal tumor. These so‑called “benign” tumors often present with upper GI bleeding and gastric outlet obstruction. It was recently demonstrated that approximately one‑third of PF have activation of the GLI1 oncogene, a transcription factor in the hedgehog (Hh) pathway, via a MALAT1‑GLI1 fusion protein or GLI1 up‑regulation. Despite this discovery, the biology of most PFs remains unknown. Methods: Next generation sequencing (NGS) was performed on formalin‑fxed parafn‑embedded (FFPE) samples of PF specimens collected from three institutions (UCSD, NCI and OHSU). Fresh frozen tissue from one tumor was utilized for in vitro assays, including quantitative RT‑PCR and cell viability assays following drug treatment. Results: Eight patients with PF were identifed and 5 patients’ tumors were analyzed by NGS. An index case had a mono‑allelic PTCH1 deletion of exons 15–24 and a second case, identifed in a validation cohort, also had a PTCH1 gene loss associated with a suspected long‑range chromosome 9 deletion. Building on the role of Hh signaling in PF, PTCH1, a tumor suppressor protein, functions upstream of GLI1. Loss of PTCH1 induces GLI1 activation and down‑ stream gene transcription. -
The Role of Gli3 in Inflammation
University of New Hampshire University of New Hampshire Scholars' Repository Doctoral Dissertations Student Scholarship Winter 2020 THE ROLE OF GLI3 IN INFLAMMATION Stephan Josef Matissek University of New Hampshire, Durham Follow this and additional works at: https://scholars.unh.edu/dissertation Recommended Citation Matissek, Stephan Josef, "THE ROLE OF GLI3 IN INFLAMMATION" (2020). Doctoral Dissertations. 2552. https://scholars.unh.edu/dissertation/2552 This Dissertation is brought to you for free and open access by the Student Scholarship at University of New Hampshire Scholars' Repository. It has been accepted for inclusion in Doctoral Dissertations by an authorized administrator of University of New Hampshire Scholars' Repository. For more information, please contact [email protected]. THE ROLE OF GLI3 IN INFLAMMATION BY STEPHAN JOSEF MATISSEK B.S. in Pharmaceutical Biotechnology, Biberach University of Applied Sciences, Germany, 2014 DISSERTATION Submitted to the University of New Hampshire in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy In Biochemistry December 2020 This dissertation was examined and approved in partial fulfillment of the requirement for the degree of Doctor of Philosophy in Biochemistry by: Dissertation Director, Sherine F. Elsawa, Associate Professor Linda S. Yasui, Associate Professor, Northern Illinois University Paul Tsang, Professor Xuanmao Chen, Assistant Professor Don Wojchowski, Professor On October 14th, 2020 ii ACKNOWLEDGEMENTS First, I want to express my absolute gratitude to my advisor Dr. Sherine Elsawa. Without her help, incredible scientific knowledge and amazing guidance I would not have been able to achieve what I did. It was her encouragement and believe in me that made me overcome any scientific struggles and strengthened my self-esteem as a human being and as a scientist. -
Birth Defects Caused by Mutations in Human GLI3 and Mouse Gli3 Genescga
doi:10.1111/j.1741-4520.2009.00266.x Congenital Anomalies 2010; 50, 1–7 1 REVIEW ARTICLE Birth defects caused by mutations in human GLI3 and mouse Gli3 genescga_ 266 1..71..7 Ichiro Naruse1, Etsuko Ueta1, Yoshiki Sumino1, Masaya Ogawa1, and Satoshi Ishikiriyama2 1School of Health Science, Faculty of Medicine, Tottori University, Yonago, and 2Division of Clinical Genetics and Cytogenetics, Shizuoka Children’s Hospital, Shizuoka, Japan ABSTRACT GLI3 is the gene responsible for Greig cepha- type-A (PAP-A) and preaxial polydactyly type-IV (PPD-IV). A lopolysyndactyly syndrome (GCPS), Pallister–Hall syndrome mimic phenomenon is observed in mice. Investigation of human (PHS) and Postaxial polydactyly type-A (PAP-A). Genetic poly- GLI3 and Gli3 genes has progressed using the knowledge of dactyly mice such as Pdn/Pdn (Polydactyly Nagoya), XtH/XtH Cubitus interruptus (Ci) in Drosophila, a homologous gene of GLI3 (Extra toes) and XtJ/XtJ (Extra toes Jackson) are the mouse and Gli3 genes. These genes have been highly conserved in the homolog of GCPS, and Gli3tmlUrtt/Gli3tmlUrt is produced as the animal kingdom throughout evolution. Now, a lot of mutant mice of mouse homolog of PHS. In the present review, relationships Gli3 gene have been known and knockout mice have been pro- between mutation points of GLI3 and Gli3, and resulting phe- duced. It is expected that the knowledge obtained from mutant and notypes in humans and mice are described. It has been con- knockout mice will be extrapolated to the manifestation mecha- firmed that mutation in the upstream or within the zinc finger nisms in human diseases to understand the diseases caused by the domain of the GLI3 gene induces GCPS; that in the post-zinc mutations in GLI3 gene. -
Distinct Activities of Gli1 and Gli2 in the Absence of Ift88 and the Primary Cilia
Journal of Developmental Biology Article Distinct Activities of Gli1 and Gli2 in the Absence of Ift88 and the Primary Cilia Yuan Wang 1,2,†, Huiqing Zeng 1,† and Aimin Liu 1,* 1 Department of Biology, Eberly College of Sciences, Center for Cellular Dynamics, Huck Institute of Life Science, The Penn State University, University Park, PA 16802, USA; [email protected] (Y.W.); [email protected] (H.Z.) 2 Department of Occupational Health, School of Public Health, China Medical University, No.77 Puhe Road, Shenyang North New Area, Shenyang 110122, China * Correspondence: [email protected]; Tel.: +1-814-865-7043 † These authors contributed equally to this work. Received: 2 November 2018; Accepted: 16 February 2019; Published: 19 February 2019 Abstract: The primary cilia play essential roles in Hh-dependent Gli2 activation and Gli3 proteolytic processing in mammals. However, the roles of the cilia in Gli1 activation remain unresolved due to the loss of Gli1 transcription in cilia mutant embryos, and the inability to address this question by overexpression in cultured cells. Here, we address the roles of the cilia in Gli1 activation by expressing Gli1 from the Gli2 locus in mouse embryos. We find that the maximal activation of Gli1 depends on the cilia, but partial activation of Gli1 by Smo-mediated Hh signaling exists in the absence of the cilia. Combined with reduced Gli3 repressors, this partial activation of Gli1 leads to dorsal expansion of V3 interneuron and motor neuron domains in the absence of the cilia. Moreover, expressing Gli1 from the Gli2 locus in the presence of reduced Sufu has no recognizable impact on neural tube patterning, suggesting an imbalance between the dosages of Gli and Sufu does not explain the extra Gli1 activity. -
Hedgehog Interacting Protein (HHIP) Represses Airway Remodeling And
www.nature.com/scientificreports OPEN Hedgehog interacting protein (HHIP) represses airway remodeling and metabolic reprogramming in COPD‑derived airway smooth muscle cells Yan Li1,2,7*, Li Zhang2,3, Francesca Polverino4, Feng Guo2, Yuan Hao2, Taotao Lao5, Shuang Xu2, Lijia Li2, Betty Pham2, Caroline A. Owen6 & Xiaobo Zhou2,6* Although HHIP locus has been consistently associated with the susceptibility to COPD including airway remodeling and emphysema in genome‑wide association studies, the molecular mechanism underlying this genetic association remains incompletely understood. By utilizing Hhip+/- mice and primary human airway smooth muscle cells (ASMCs), here we aim to determine whether HHIP haploinsufciency increases airway smooth muscle mass by reprogramming glucose metabolism, thus contributing to airway remodeling in COPD pathogenesis. The mRNA levels of HHIP were compared in normal and COPD‑derived ASMCs. Mitochondrial oxygen consumption rate and lactate levels in the medium were measured in COPD‑derived ASMCs with or without HHIP overexpression as readouts of glucose oxidative phosphorylation and aerobic glycolysis rates. The proliferation rate was measured in healthy and COPD‑derived ASMCs treated with or without 2‑DG. Smooth muscle mass around airways was measured by immunofuorescence staining for α‑smooth muscle actin (α‑SMA) in lung sections from Hhip+/- mice and their wild type littermates, Hhip+/+ mice. Airway remodeling was assessed in Hhip+/- and Hhip+/- mice exposed to 6 months of cigarette smoke. Our results show HHIP inhibited aerobic glycolysis and represses cell proliferation in COPD‑derived ASMCs. Notably, knockdown of HHIP in normal ASMCs increased PKM2 activity. Importantly, Hhip+/- mice demonstrated increased airway remodeling and increased intensity of α‑SMA staining around airways compared to Hhip+/+ mice. -
Highly Conserved C-Terminal Region of Indian Hedgehog N-Fragment Contributes to Its Auto-Processing and Multimer Formation
biomolecules Article Highly Conserved C-Terminal Region of Indian Hedgehog N-Fragment Contributes to Its Auto-Processing and Multimer Formation Xiaoqing Wang 1,2 , Hao Liu 3 , Yanfang Liu 2, Gefei Han 2, Yushu Wang 2 , Haifeng Chen 3,*, Lin He 2,* and Gang Ma 1,2,* 1 Bio-X-Renji Hospital Research Center, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai 200240, China; [email protected] 2 Key Laboratory for the Genetics of Developmental and Neuropsychiatric Disorders (Ministry of Education), Bio-X Institutes, Shanghai Jiao Tong University, Shanghai 200240, China; [email protected] (Y.L.); [email protected] (G.H.); [email protected] (Y.W.) 3 State Key Laboratory of Microbial Metabolism, Department of Bioinformatics and Biostatistics, National Experimental Teaching Center for Life Sciences and Biotechnology, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China; [email protected] * Correspondence: [email protected] (H.C.); [email protected] (L.H.); [email protected] (G.M.) Abstract: Hedgehog (HH) is a highly conserved secretory signalling protein family mainly involved in embryonic development, homeostasis, and tumorigenesis. HH is generally synthesised as a precursor, which subsequently undergoes autoproteolytic cleavage to generate an amino-terminal fragment (HH-N), mediating signalling, and a carboxyl-terminal fragment (HH-C), catalysing the Citation: Wang, X.; Liu, H.; Liu, Y.; auto-processing reaction. The N-terminal region of HH-N is required for HH multimer formation Han, G.; Wang, Y.; Chen, H.; He, L.; to promote signal transduction, whilst the functions of the C-terminal region of HH-N remain Ma, G. -
Underestimated PTCH1 Mutation Rate in Sporadic Keratocystic Odontogenic Tumors Q
Oral Oncology 51 (2015) 40–45 Contents lists available at ScienceDirect Oral Oncology journal homepage: www.elsevier.com/locate/oraloncology Underestimated PTCH1 mutation rate in sporadic keratocystic odontogenic tumors q Jiafei Qu a, Feiyan Yu a, Yingying Hong a, Yanyan Guo a, Lisha Sun b, Xuefen Li b, Jianyun Zhang a, ⇑ ⇑ Heyu Zhang b, Ruirui Shi b, Feng Chen b, , Tiejun Li a, a Department of Oral Pathology, Peking University School and Hospital of Stomatology, Beijing, China b Central Laboratory, Peking University School and Hospital of Stomatology, Beijing, China article info summary Article history: Objectives: Keratocystic odontogenic tumors (KCOTs) are benign cystic lesions of the jaws that occur spo- Received 11 July 2014 radically in isolation or in association with nevoid basal cell carcinoma syndrome (NBCCS). The protein Received in revised form 29 August 2014 patched homolog 1 gene (PTCH1) is associated with NBCCS development and tumor genesis associated Accepted 26 September 2014 with this syndrome. However, previous studies have revealed that more than 85% of syndromic KCOTs Available online 18 November 2014 and less than 30% of sporadic KCOTs harbor PTCH1 mutations. The significantly lower PTCH1 mutation rates observed in sporadic KCOTs suggest that they serve a minor role in pathogenesis. We aimed to Keywords: discern the importance of PTCH1 mutations in sporadic KCOTs. PTCH1 Materials and methods: PTCH1 mutational analysis was performed with 19 new sporadic KCOT cases by Mutation Keratocystic odontogenic tumors direct sequencing of epithelial lining samples separated from fibrous capsules. Using this approach, we further reexamined 9 sporadic KCOTs that were previously reported to lack PTCH1 mutations by our group. -
Arhgap36-Dependent Activation of Gli Transcription Factors
Arhgap36-dependent activation of Gli transcription factors Paul G. Racka,1, Jun Nia,1, Alexander Y. Payumoa, Vien Nguyenb,c, J. Aaron Crapstera, Volker Hovestadtd, Marcel Koole, David T. W. Jonese, John K. Michf,2, Ari J. Firestonea,3, Stefan M. Pfistere,g, Yoon-Jae Choh,i, and James K. Chena,j,4 Departments of aChemical and Systems Biology, hNeurology and Neurological Sciences, iNeurosurgery, jDevelopmental Biology, and fBiochemistry, Stanford University School of Medicine, Stanford, CA 94305; Departments of bPediatrics and cNeurosurgery, Eli and Edythe Broad Institute for Stem Cell Research and Regenerative Medicine, University of California, San Francisco, CA 94143; Divisions of dMolecular Genetics and ePediatric Neurooncology, German Cancer Research Center, 69120 Heidelberg, Germany; and gDepartment of Pediatric Oncology, Hematology, and Immunology, Heidelberg University Hospital, 69120 Heidelberg, Germany Edited* by Philip A. Beachy, Stanford University, Stanford, CA, and approved June 23, 2014 (received for review December 4, 2013) Hedgehog (Hh) pathway activation and Gli-dependent transcrip- find that Arhgap36 overexpression recapitulates multiple tion play critical roles in embryonic patterning, tissue homeostasis, aspects of Hh signal transduction, including reduced Gli3R lev- and tumorigenesis. By conducting a genome-scale cDNA over- els, ciliary accumulation of Gli2, and Gli1 expression. These expression screen, we have identified the Rho GAP family member effects are independent of Smo and require kinesin family Arhgap36 as a positive regulator of the Hh pathway in vitro and in member 3a (Kif3a) and intraflagellar transport protein 88 vivo. Arhgap36 acts in a Smoothened (Smo)-independent manner (Ift88). Arhgap36 also functionally interacts with Sufu and can to inhibit Gli repressor formation and to promote the activation of biochemically associate with this Gli antagonist. -
Members of the Rusc Protein Family Interact with Sufu and Inhibit
© 2016. Published by The Company of Biologists Ltd | Development (2016) 143, 3944-3955 doi:10.1242/dev.138917 RESEARCH ARTICLE Members of the Rusc protein family interact with Sufu and inhibit vertebrate Hedgehog signaling Zhigang Jin1, Tyler Schwend1,*, Jia Fu1, Zehua Bao2, Jing Liang2,‡, Huimin Zhao2, Wenyan Mei1 and Jing Yang1,§ ABSTRACT et al., 2004). The proper response of cells to Shh is crucial for these Hedgehog (Hh) signaling is fundamentally important for development developmental processes. and adult tissue homeostasis. It is well established that in vertebrates At the molecular level, the zinc-finger transcription factor Sufu directly binds and inhibits Gli proteins, the downstream Cubitus interruptus (Ci) and its vertebrate homologs, the mediators of Hh signaling. However, it is unclear how the inhibitory Gli proteins, act at the downstream end of the pathway to mediate function of Sufu towards Gli is regulated. Here we report that the Rusc Hh signaling in Drosophila and vertebrates, respectively. In family of proteins, the biological functions of which are poorly unstimulated cells, multiple inhibitory mechanisms act in understood, form a heterotrimeric complex with Sufu and Gli. Upon coordination to keep Ci/Gli in check. The Hh family of proteins Hh signaling, Rusc is displaced from this complex, followed by operates the pathway by relieving these inhibitory mechanisms, dissociation of Gli from Sufu. In mammalian fibroblast cells, which ultimately converts Ci and Gli into transcriptional activators knockdown of Rusc2 potentiates Hh signaling by accelerating and induces expression of Hh target genes. Interfering with these Hh signaling-induced dissociation of the Sufu-Gli protein complexes. -
Divergence and Perpetuation in Sufu Regulation of Gli
Downloaded from genesdev.cshlp.org on September 30, 2021 - Published by Cold Spring Harbor Laboratory Press PERSPECTIVE Variations in Hedgehog signaling: divergence and perpetuation in Sufu regulation of Gli Laurent Ruel and Pascal P. The´rond1 Institut Biologie du De´veloppement et Cancer-IBDC, Universite´ de Nice-Sophia Antipolis, CNRS UMR 6543, Centre de Biochimie, 06108 Nice Cedex 02, France The Hedgehog (Hh) proteins play a universal role in myelogenous leukaemia, and multiple myeloma, as well metazoan development. Nevertheless, fundamental dif- as cancers affecting the pancreas and digestive tract ferences exist between Drosophila and vertebrates in the (Beachy et al. 2004). transduction of the Hh signal, notably regarding the The importance of Hh as an organizing molecule is also role of primary cilia in mammalian cells. In this issue apparent in the conservation of its signaling pathway. In of Genes & Development, Chen and colleagues (pp. both Drosophila and vertebrates, secreted Hh binds to its 1910–1928) demonstrate that mouse Suppressor of fused receptor, Patched (Ptc), and to its coreceptor, interference (Sufu) regulates the stability of the transcription factors hedgehog (ihog/Cdo). It has been proposed that Ptc, which Gli2 and Gli3 by antagonizing the conserved Gli degra- constitutively represses the Hh pathway, belongs to a pro- dation device mediated by Hib/Spop in a cilia-independent ton gradient-driven transporter family and enzymatically manner. inhibits the conserved transmembrane protein Smooth- ened (Smo) of the G-protein-coupled receptor (GPCR) family (Taipale et al. 2002; Corcoran and Scott 2006). In Drosophila, the binding of Hh to Ptc induces transloca- The Hedgehog (Hh) family of secreted proteins is involved tion of Smo to the plasma membrane, leading to the in the developmental regulation of numerous tissues activation of Smo and of the downstream zinc finger and organs. -
Participation of HHIP Gene Variants in COPD Susceptibility, Lung Function, and Serum and Sputum Protein Levels in Women Exposed to Biomass-Burning Smoke
diagnostics Article Participation of HHIP Gene Variants in COPD Susceptibility, Lung Function, and Serum and Sputum Protein Levels in Women Exposed to Biomass-Burning Smoke Alejandro Ortega-Martínez 1,2 , Gloria Pérez-Rubio 1 , Alejandra Ramírez-Venegas 3, María Elena Ramírez-Díaz 4, Filiberto Cruz-Vicente 5, María de Lourdes Martínez-Gómez 6, Espiridión Ramos-Martínez 7 , Edgar Abarca-Rojano 2,* and Ramcés Falfán-Valencia 1,* 1 HLA Laboratory, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas, Mexico City 14080, Mexico; [email protected] (A.O.-M.); [email protected] (G.P.-R.) 2 Sección de Estudios de Posgrado e Investigación. Escuela Superior de Medicina, Instituto Politécnico Nacional, Plan de San Luis y Díaz Mirón s/n, Casco de Santo Tomas, Mexico City 11340, Mexico 3 Tobacco Smoking and COPD Research Department, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas, Mexico City 14080, Mexico; [email protected] 4 Coordinación de Vigilancia Epidemiológica, Jurisdicción 06 Sierra, Tlacolula de Matamoros Oaxaca, Servicios de Salud de Oaxaca, Oaxaca 70400, Mexico; [email protected] 5 Internal Medicine Department. Hospital Civil Aurelio Valdivieso, Servicios de Salud de Oaxaca, Oaxaca 68050, Mexico; fi[email protected] 6 Hospital Regional de Alta Especialidad de Oaxaca, Oaxaca 71256, Mexico; [email protected] 7 Experimental Medicine Research Unit, Facultad de Medicina, Universidad Nacional Autónoma de México, Mexico City 06720, Mexico; [email protected] * Correspondence: [email protected] (E.A.-R.); [email protected] (R.F.-V.); Tel.: +52-55-5729-6000 (ext. 62718) (E.A.-R.); +52-55-5487-1700 (ext. 5152) (R.F.-V.) Received: 6 August 2020; Accepted: 16 September 2020; Published: 23 September 2020 Abstract: Background: A variety of organic materials (biomass) are burned for cooking and heating purposes in poorly ventilated houses; smoke from biomass combustion is considered an environmental risk factor for chronic obstructive pulmonary disease COPD. -
1 Expression of Sonic Hedgehog and Pathway Components In
bioRxiv preprint doi: https://doi.org/10.1101/2021.03.30.437697; this version posted March 31, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Expression of Sonic Hedgehog and Pathway Components in the Embryonic Mouse Head: Anatomical Relationships Between Regulators of Positive and Negative Feedback Crystal L. Sigulinsky1, Xiaodong Li2, and Edward M. Levine1,2,3* 1 Department of Ophthalmology and Visual Sciences, John A. Moran Eye Center, University of Utah, Salt Lake City, Utah 2 Department of Ophthalmology and Visual Sciences, Vanderbilt Eye Institute, Vanderbilt University Medical Center, Nashville, Tennessee 3 Department of Cell and Developmental Biology, Vanderbilt University, Nashville, Tennessee *Corresponding Author 1 bioRxiv preprint doi: https://doi.org/10.1101/2021.03.30.437697; this version posted March 31, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. ABSTRACT Objective: The Hedgehog pathway is a fundamental signaling pathway in organogenesis. The expression patterns of the ligand Sonic Hedgehog (Shh) and key pathway components have been studied in many tissues but direct spatial comparisons across tissues with different cell compositions and structural organization are not common and could reveal tissue-specific differences in pathway dynamics. Results: We directly compared the expression characteristics of Shh, and four genes with functional roles in signaling and whose expression levels serve as readouts of pathway activity in multiple tissues of the embryonic mouse head at embryonic day 15.5 by serial in situ hybridization.