Putrescine and Spermidine Changes in Heat-Synchronized Tetrahymena Populations

Total Page:16

File Type:pdf, Size:1020Kb

Putrescine and Spermidine Changes in Heat-Synchronized Tetrahymena Populations 604 B. HOLM AND O. HEBY Putrescine and Spermidine Changes in Heat-synchronized Tetrahymena Populations BORIS HOLM and OLLE HEBY Institute of Zoophysiology, University of Lund, S-223 62 Lund, Sweden (Z. Naturforsdi. 26 b, 604—606 [1971] ; received March 3, 1971) Putrescine and spermidine were the dominant polyamines in Tetrahymena cells. Spermine was present only in very small amounts. Changes in the amount of putrescine during and after the synchronizing heat treatment followed a definite quantitative pattern. Changes in the amount of spermidine were similar, though not so pronounced. The changes may be due to a varied influx of polyamines into the cells. Moreover, the exchange of polyamines between the cells and the culture medium must be specifically regulated since there seems to be a relatively greater accumulation of spermidine than of putrescine in the cells, and since spermine was almost excluded from the cells. Putrescine, spermidine and spermine have been medium, which consisted of 2 per cent proteose pep- found in all cells so far examined. Spermidine and tone (Difco), 0.3 per cent yeast extract (Difco) and inorganic salts in the following amounts per 1: 10 g spermine are dominant in animal cells, while MgS04x7H,0, 0.5 g CuCl2 x 2 H20, 7.5 g CaCl2 x putrescine and spermidine are the most frequent of 6 H20, 0.125 g FeCl3x6H20, 0.05 g MnCl2x4H20, these amines in bacteriaIn most cases, these 6 mg ZnAc x 2 H20, 2.5 g Fe(NH4) (S04) 2 x 6 H20. amines are referred to as polyamines, although After inoculation of each flask with 5 ml of 2-days putrescine is a diamine. Their postulated role as old stock cultures, and subsequent exponentiil growth stabilizers of nucleic acids has attracted much atten- for 14 hours, the cultures were synchronized by 7 heat shocks at 34 °C, lasting 30 min each, during a total tion 2' 3. In vitro experiments have yielded evidence period of 7 hours, according to SCHERBAUM and that polyamines compete with metal ions at the ZEUTHEN 9. The cultures were mixed and distributed organization of ribosomes (for references see again during the interval at 28 °C between the fourth STEVENS *) as well as with histones at nucleopro- and fifth shocks. 200 ml samples were withdrawn, two tein formation 4. at a time, at appropriate intervals during the heat treat- ment and the subsequent period up to and including The presence of putrescine, spermidine and sper- the second synchronous division. The samples were mine in Tetrahymena cells has earlier been estab- centrifuged and the cells were rapidly washed in 0.4 lished by WELLER, RAINA and JOHNSTONE5, and per cent NaCl, frozen and stored at — 20 °C. Small ARLOCK, HEBY and HOLM 6. These observations are samples (2 xl ml) were removed from each 200 ml sample before centrifugation and the number of cells confirmed in the present paper. The high amounts per ml was counted in a Celloscope. The times and of polyamines in the cell suggest that they may the degree of synchronous divisions were established participate in ionic regulation. The polyamine con- by calculating the maximum values of the ratio between tent during and after heat treatment changes in- the number of cells in division and the total number of versely with the amount of bound Mg and in parallel cells. with the stability of DNA previously registered 7' 8. Preparation and analysis of polyamines: Frozen cell samples of 2.0 —2.5 ml volume were homogenized in ice-cold 0.9 per cent NaCl with a Teflon homogenizer. Material and Methods The proteins in the homogenates were precipitated by addition of ice-cold trichloroacetic acid and removed Experimental cultivation and sampling: The ciliate by filtration. The supernatants were extracted three Tetrahymena pyriformis, amicronucleate strain GL, was times with diethyl ether to remove the acid, and the cultured at 28 °C in Fernbach flasks containing 500 ml amines were then extracted into n-butanol according Reprints request to Dr. BORIS HOLM, Institute of Zoophy- 5 D. L. WELLER, A. RAINA, and D. B. JOHNSTONE, Biochim. siology University of Lund, S-223 62 Lund, Sweden. biophysica Acta [Amsterdam] 157, 558 [1968]. 1 L. STEVENS, Biol. Rev. 45,1 [1970]. 6 P. ARLOCK, O. HEBY, and B. HOLM, J. Protozool. 16 Suppl. 2 R. R. MACGREGOR and H. R. MAHLER, Arch. Biochem. 33 [1969], Biophysics 120, 136 [1967]. 7 B. HOLM, Exp. Cell Res. 53,18 [1968], 3 O. HEBY and I. AGRELL, Hoppe-Seyler's Z. physiol. Chem. 8 B. HOLM, J. Protozool. 17, 615 [1970], 352, 29 [1971]. 9 O. SCHERBAUM and E. ZEUTHEN, Exp. Cell Res., Suppl., 4 I. AGRELL and O. HEBY, Hoppe-Seyler's Z. physiol. Chem. 3,312 [1955]. 352, 39 [1971]. PUTRESCINE AND SPERMIDINE CHANGES 605 10 r 160 to RAINA . The rc-butanol layer was acidified and lyo- spermidine philized. The residues were dissolved in 0.1 M HCl and stored in small test-tubes until analysis. The polyamines were separated by thin-layer chro- -80 matography according to HAMMOND and HERBST U. 5 [A samples were applied on thin-layer plates coated with Whatman Cellulose CC41. The solvent system used was ethylene glycol monomethyl ether : propionic g L0 acid : water (70 : 15 : 15) saturated with NaCl. The solvent was removed by heating and the plates immer- sed in a 1 per cent solution of ninhydrin in absolute putrescine ethanol containing 1 per cent 2,4,6-trimethylpyridine. -160 The plates were developed at 60 °C for 15 minutes and the coloured spots were scraped off and aspirated quantitatively3 into 70 per cent ethanol. When the colour had been eluted, the cellulose powder was sedimented by centrifugation. The absorbance of poly- amines at 575 m/u was used for the quantitative deter- minations. L Standard solutions of spermine tetrahydrochloride, 0 spermidine trihydrochloride and putrescine dihydro- chloride (Calbiochem) were included in duplicate on EH 60 120 180 each thin-layer plate. min. after EH- Fig. 1. Changes in the amounts of putrescine and sper- Results midine during and after the synchronizing heat treatment of Tetrahymena cells. Standard errors are given for the mean Of the polyamines, putrescine and spermidine ap- values of samples. The vertical broken lines indicate the mean times for the first and second synchronous divisions. The ab- peared in the highest amounts in the Tetrahymena scissa shows the last four heat hocks, EH (end of heat treat- cells. Spermine was present, but only in very small ment) and the following 210 minutes. The values after the amounts. Cadaverine, which had earlier been ob- syndironous divisions increase in proportion to the actual number of cells, so that all values correspond to the number tained 6, could not be detected by the present of original cells obtained at EH. method. The changes in the amounts of intracellular putrescine and 6.8 ± 0.4 nmoles spermidine per mil- putrescine between the fourth shock and the second lion cells. The pure medium was found to contain synchronous division are shown in Fig. 1. The peak 180 nmoles putrescine, 47 nmoles spermidine and during the last shock is statistically significant (/ = 40 nmoles spermine per ml respectively. These 10, Z = 3.38 and P<0.01) as is the increase from values were compared with the polyamine concentra- EH (EH = end of heat treatment) to 60 minutes tion in the Tetrahymena cells. By estimating the cell after EH (/= 10, « = 3.49 and P<0.01). The peak volume at EH to be 70 ju\ per million cells, ac- between the synchronous divisions is also significant cording to ZEUTHEN and SCHERBAUM 12, it was (/ = 5, « = 3.05 and P<0.05). The changes in sper- calculated that the approximate concentration of midine content are not so pronounced (Fig. 1). The putrescine and spermidine in the cells was 5 and 8 peak at 60 minutes after EH is, however, significant times higher, respectively, than in the medium. (/= 10, t = 2.13 and P<0.05). The intracellular amount of putrescine exceeded that of spermidine by Discussion more than a factor of 2. The amounts of putrescine and spermidine in the The variation in the amount of putrescine in heat- heat-synchronized cell cultures at EH were about synchronized Tetrahymena cultures closely parallels three times higher than in exponentially growing cul- the change in the uptake of 3H-putrescine from the tures. The latter contained 21.7+1.8 nmoles medium13. As there are polyamines in the sur- 10 A. RAINA, Acta physiol. scand. 60, Suppl. 218, 1 [1963]. 12 E. ZEUTHEN and O. SCHERBAUM, in: Recent Developments 11 J. E. HAMMOND and E .J. HERBST, Analyt. Biochem. [New in Cell Physiology, (J. A. KITCHING, ed.). Butterworths, York] 22, 474 [1968]. London, 141, 1954. 13 B. HOLM and H. EMANUELSSON, Z. Zellforsch. 115, 593 [1971]. 606 PUTRESCINE AND SPERMIDINE CHANGES 606 rounding medium, it seems reasonable to assume These simple relationships between some cations that part of the increase may be due to an in- may not be relevant under the more complicated creased influx into the cells. Results earlier obtained conditions in vivo. However, the magnitude of the suggest a very low or non-existent spermidine syn- changes in the ion content of heat-synchronized Tetra- thesis in Tetrahymena; no 3H-putrescine was found hymena suggests that the variations in polyamine to be transformed to 3H-spermidine13. An endo- content must be taken into account. During the seventh genous production of putrescine in Tetrahymena shock the amount of bound Mg increased by about cannot be confirmed until it has been shown that 25 nmoles per million cells while the putrescine possible precursors such as arginine and ornithine content decreased by about 40 nmoles per million are incorporated into putrescine.
Recommended publications
  • (N-BUTYL)-I,3-DIAMINOPROPANE on POLYAMINE METABOLISM, CELL GROWTH and SENSITIVITY to CHLOROETHYLATING AGENTS
    Biochemical Pharmacoh~gy. Vol. 46, No. 4, pp. 717-724, 1993. (101g~-2952/93 $6.1111 + (I.{KI Printed in Great Britain. © 1993. Pergamon Press Lid EFFECT OF N-(n-BUTYL)-I,3-DIAMINOPROPANE ON POLYAMINE METABOLISM, CELL GROWTH AND SENSITIVITY TO CHLOROETHYLATING AGENTS ANTHONY E. PEGG*'t" and JAMES K. COWARD~: *Departments of Cellular and Molecular Physiology and Pharmacology, Milton S. Hershey Medical Center. Pennsylvania State University College of Medicine, Hershey, PA 17033; and CDepartments of Chemistry and Medicinal Chemistry, The University of Michigan. Ann Arbor, MI 48109, U.S.A. (Received 29 January 1993: accepted 5 April 1993) Abstract--The effects of N-(n-butyl)-l,3-diaminopropane (BDAP) on cell growth and polyamine content were examined in L1210, SV-3T3 and HT-29 cells. In all cases, BDAP was a specific and highly effective inhibitor of spermine synthesis, and spermine levels were greatly suppressed in the presence of 50/LM BDAP. At the same time, there was a parallel increase in spermidine, which equalled or exceeded the fall in spermine so that total polyamine levels were not reduced. Cell growth was not affected in short-term experiments but culture of L1210 cells for 72-144 hr in the presence of BDAP did lead to an effect on growth that was reversed by the addition of spermine. These results suggest that, in the short term, a normal growth rate is maintained by spermidine but that a function or cellular component critically dependent on spermine becomes depleted at longer times. BDAP was a weak inducer of spermidine/spermine-Nl-acetyltransferase and this enzyme may be responsible for excretion or degradation of the inhibitor.
    [Show full text]
  • Supporting Information
    Supporting Information Janzer et al. 10.1073/pnas.1409844111 SI Materials and Methods Lipogenesis. De novo lipogenesis was measured in MCF-10A Cell Lines and Culture Conditions. MCF-10A ER-Src cells were ERSrc cells 24 h after treatment ± tamoxifen and ± biguanide. 14 grown as previously described in DMEM/F12 media supple- Cells were pulsed for 4 h with 0.8 μCi C-glucose (Perkin- mented with charcoal stripped FBS, penicillin/streptomycin, Elmer) per 800 μL media ± biguanide. Cells were rinsed twice puromycin, EGF, hydrocortisone, insulin, and choleratoxin (1). with PBS and then lysed in 0.5% Triton X-100. The lipid fraction Transformation via Src activation was induced by addition to was obtained by chloroform and methanol (2:1 vol/vol) extrac- 1 μM tamoxifen (Sigma) for 24 h. Metformin (300 μM) or tion, followed by the addition of water. Samples were centri- 14 phenformin (10 μM) was added, together with tamoxifen. fuged, and the bottom phase was collected to measure C CAMA-1 cells were grown in DMEM media containing 10% incorporation into lipids. All scintillation counts were normal- FBS and antibiotics. ized to protein concentrations. Mammosphere Culture Conditions. CAMA-1 cells were trypsinized Statistical Analysis. To identify significantly altered metabolites and counted, and 10,000 cells/mL were seeded in ultra-low at- with either metformin or phenformin treatment in comparison tachment plates in serum-free mammosphere media as previously with control treatment, metabolites from each sample were described (2). Cells were passaged every 7 d and collected in normalized to total metabolite counts. A Student t test was 50-mL tubes, and the plate was washed once with PBS and performed, and changed metabolites with a P < 0.05 were used combined with the collected cells.
    [Show full text]
  • Possible Applications of Diethylenetriamine (Deta) in Co2 Capturing- a Mini - Review
    ___________________ POSSIBLE APPLICATIONS OF DIETHYLENETRIAMINE (DETA) IN CO2 CAPTURING- A MINI - REVIEW Rawat N1,*, Iglič A1,2, Gimsa J3 1Laboratory of Physics, Faculty of Electrical Engineering, University of Ljubljana, 1000 Ljubljana, Slovenia 2Laboratory of Clinical Biophysics, Chair, Faculty of Medicine, University of Ljubljana, 1000 Ljubljana, Slovenia 3University of Rostock, Chair for Biophysics, Gertrudenstr. 11A, 18057 Rostock, Germany *[email protected] Abstract In the past decades, reduction of carbon dioxide (CO2) emissions into the atmosphere has become a challenging goal. Capturing the CO2 directly before storage is becoming a thriving alternative approach. Septavaux et al. (1) have proposed a CO2 fixation method using diethylenetriamine (DETA) to produce a range of carbamation species that can be used for metal separation and recovery. They could show that lanthanum and nickel can be separated from the exhaust gases of vehicle engines by successive CO2-induced selective precipitations. Individual metal components of La2Ni9Co alloys used to manufacture batteries for electric vehicles can also be separated. Here we suggest to use DETA as a mediator for an attractive interaction between like-charged macroions. ___________________ 79 1. Introduction Carbon dioxide (CO2) emission into the atmosphere has increased at an alarming rate. In order to reduce CO2 emissions, adequate measures for CO2 capture and storage (CCS) or utilization (CCU) need to be taken (2). Since CCS is expensive therefore more attention is directed towards CCU because it has other economic advantages. CCU would significantly reduce the cost of storage due to recycling of CO2 for further usage. In this context, Septavaux et al. (1) recently showed that the cost of CO2 capturing with the industrial polyamine DETA can be reduced even further with another environmentally beneficial process (3).
    [Show full text]
  • Article the Bee Hemolymph Metabolome: a Window Into the Impact of Viruses on Bumble Bees
    Article The Bee Hemolymph Metabolome: A Window into the Impact of Viruses on Bumble Bees Luoluo Wang 1,2, Lieven Van Meulebroek 3, Lynn Vanhaecke 3, Guy Smagghe 2 and Ivan Meeus 2,* 1 Guangdong Provincial Key Laboratory of Insect Developmental Biology and Applied Technology, Institute of Insect Science and Technology, School of Life Sciences, South China Normal University, Guangzhou, China; [email protected] 2 Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Ghent, Belgium; [email protected], [email protected] 3 Laboratory of Chemical Analysis, Department of Veterinary Public Health and Food Safety, Faculty of Vet- erinary Medicine, Ghent University, Merelbeke, Belgium; [email protected]; [email protected] * Correspondence: [email protected] Selection of the targeted biomarker set: In total we identified 76 metabolites, including 28 amino acids (37%), 11 carbohy- drates (14%), 11 carboxylic acids, 2 TCA intermediates, 4 polyamines, 4 nucleic acids, and 16 compounds from other chemical classes (Table S1). We selected biologically-relevant biomarker candidates based on a three step approach: (1) their expression profile in stand- ardized bees and its relation with viral presence, (2) pathways analysis on significant me- tabolites; and (3) a literature search to identify potential viral specific signatures. Step (1) and (2), pathways analysis on significant metabolites We performed two-way ANOVA with Tukey HSD tests for post-hoc comparisons and used significant metabolites for metabolic pathway analysis using the web-based Citation: Wang, L.L.; Van platform MetaboAnalyst (http://www.metaboanalyst.ca/) in order to get insights in the Meulebroek, L.; Vanhaecke.
    [Show full text]
  • Evaluation of Polyamine and Proline Levels During
    Plant Physiol. (1987) 84, 692-695 0032-0889/87/84/0692/04/$O 1.00/0 Evaluation of Polyamine and Proline Levels during Low Temperature Acclimation of Citrus' Received for publication November 28, 1986 and in revised form February 25, 1987 MOSBAH M. KUSHAD* AND GEORGE YELENOSKY Department ofHorticulture, Virginia Polytechnic Institute and State University, Blacksburg, Virginia 24061 (M.M.K.), and United States Department ofAgriculture, Agricultural Research Service, 2120 Camden Road, Orlando, Florida 32803 (G.Y.) ABSTRACT Polyamines especially Put2 have been associated with various stress conditions (6, 7, 22, 31). Put has been shown to accumulate The polyamines (PA) putrescine (Put), spermidine (Spd), and spermine during chilling injury of citrus and pepper fruits (17), K+ and (Spm) were measured during 3 weeks exposure to cold hardening (15.6°C Mg2' deficiencies (14, 21, 22), in Cd2+ treated bean and oat day and 4.4°C night) and nonhardening (32.2°C day and 21.1°C night) leaves (26), at low pH (31), and during SO2 fumigation (20). temperature regimes in three citrus cultivars: sour orange (SO) (Citrus Recently, it was reported that the relative changes rather than aurantium L.), 'valencia' (VAL) (Citrus sinensis L. Osbeck), and rough the absolute levels of Put are more important in predicting lemon (RL) (Citrus jambhiri Lush). The changes in PA were compared Phaseolus species responses to chilling temperature (12). The to the amount of free proline, percent wood kill and percent leaf kill. A increase in Put is believed to contribute to balancing the increase 2- to 3-fold increase in Spd concentrations were observed in hardened in anion concentration during these stress conditions.
    [Show full text]
  • Urinary Metabolomics to Identify a Unique Biomarker Panel for Detecting Colorectal Cancer: a Multicenter Study
    Published OnlineFirst May 31, 2019; DOI: 10.1158/1055-9965.EPI-18-1291 Research Article Cancer Epidemiology, Biomarkers Urinary Metabolomics to Identify a Unique & Prevention Biomarker Panel for Detecting Colorectal Cancer: A Multicenter Study Lu Deng1, Kathleen Ismond1,2, Zhengjun Liu3, Jeremy Constable4, Haili Wang2, Olusegun I. Alatise5, Martin R. Weiser4, T.P. Kingham4, and David Chang1,2 Abstract Background: Population-based screening programs are paring the metabolomic profiles from colorectal cancer versus credited with earlier colorectal cancer diagnoses and treat- controls. Multiple models were constructed leading to a good ment initiation, which reduce mortality rates and improve separation of colorectal cancer from controls. patient health outcomes. However, recommended screen- Results: A panel of 17 metabolites was identified as possible ing methods are unsatisfactory as they are invasive, are biomarkers for colorectal cancer. Using only two of the select- resource intensive, suffer from low uptake, or have poor ed metabolites, namely diacetylspermine and kynurenine, a diagnostic performance. Our goal was to identify a urine predictor for detecting colorectal cancer was developed with an metabolomic-based biomarker panel for the detection of AUC of 0.864, a specificity of 80.0%, and a sensitivity of colorectal cancer that has the potential for global popula- 80.0%. tion-based screening. Conclusions: We present a potentially "universal" metabo- Methods: Prospective urine samples were collected from lomic biomarker panel for colorectal cancer independent of study participants. Based upon colonoscopy and histopathol- cohort clinical features based on a North American popula- ogy results, 342 participants (colorectal cancer, 171; healthy tion. Further research is needed to confirm the utility of the controls, 171) from two study sites (Canada, United States) profile in a prospective, population-based colorectal cancer were included in the analyses.
    [Show full text]
  • Influence of Putrescine on Enzymes of Ammonium Assimilation in Maize Seedling
    American Journal of Plant Sciences, 2013, 4, 297-301 http://dx.doi.org/10.4236/ajps.2013.42039 Published Online February 2013 (http://www.scirp.org/journal/ajps) Influence of Putrescine on Enzymes of Ammonium Assimilation in Maize Seedling Vineeta Awasthi1 , Indreshu Kumar Gautam1, Rakesh Singh Sengar2, Sanjay Kumar Garg1* 1Department of Plant Science, M.J.P. Rohilkhand University, Bareilly, India; 2Sardar Vallabh Bhai Patel University of Agriculture and Technology, Meerut, India. Email: *[email protected] Received October 20th, 2012; revised November 22nd, 2012; accepted November 20th, 2012 ABSTRACT The effect of different concentrations of putrescine on biochemical changes in root and shoot of six days old maize seedlings in terms of enzymes of ammonium assimilation were examined. The results revealed that glutamate dehydro- genase (GDH) activity was enhanced at lower concentration of putrescine but at higher concentration, the activity of this enzyme was declined. Glutamine synthetase (GS) activity decreased with increase in concentration of putrescine and it was highest at 1000 µm concentration. Howe ver, glutamate synthase (GOGAT) activity increased with increase in concentration of putrescine upto 100 µm in root and upto 50 µm in shoot and further increase in concentration re- sulted in decline of enzymatic activity. Protein and total nitrogen content increased upto 10 µm concentration of putre- scine and it decreased further with increase in concentration both in root and shoot of maize seedling. Keywords: Glutamate Dehydrogenase; Glutamine Synthetase; Glutamate Synthase; Maize Seedlings; Putrescine; Zea mays 1. Introduction on effect of this growth regulator on enzymes of ammo- nium assimilation. Keeping above in view, the present In all tissues of higher plants nitrogen is assimilated into investigation was carried out to study the effect of putre- organic compounds by the glutamate synthase cycle, the scine on the enzymes of ammonium assimilation viz.
    [Show full text]
  • Neurochemical Analysis of Amino Acids, Polyamines and Carboxylic Acids: GC–MS Quantitation of Tbdms Derivatives Using Ammonia Positive Chemical Ionization Paul L
    Journal of Chromatography B, 831 (2006) 313–319 Neurochemical analysis of amino acids, polyamines and carboxylic acids: GC–MS quantitation of tBDMS derivatives using ammonia positive chemical ionization Paul L. Wood ∗, M. Amin Khan, Joseph R. Moskal The Falk Center for Molecular Therapeutics, Department of Biomedical Engineering, McCormick School of Engineering and Applied Sciences, Northwestern University, 1801 Maple Avenue, Suite 4306, Evanston, IL 60201, USA Received 21 October 2005; accepted 16 December 2005 Available online 10 January 2006 Abstract The GC–MS quantitation of a large number of neurochemicals utilizing a single derivatization step is not common but is provided by the reagent N-(tert-butyldimethylsilyl)-N-methyltrifluro-acetamide (MTBSTFA). Previous workers have utilized this derivative for GC–MS analy- ses of amino acids, carboxylic acids and urea with electron impact (EI) and with positive chemical ionization (PCI; methane as reagent gas). However, these conditions yield significant fragmentation, decreasing sensitivity and in some cases reducing specificity for quantitation with selected ion monitoring (SIM). Additionally, the majority of studies have used a single internal standard to quantitate many compounds. In this study we demonstrate that using isotopic dilution combined with ammonia as the reagent gas for PCI analyses, results in high precision and sensitivity in analyzing complex neurochemical mixes. We also demonstrate for the first time the utility of this derivative for the analy- sis of brain polyamines and the dipeptide cysteinyl glycine. In the case of ammonia as the reagent gas, all amino acids, polyamines and urea yielded strong [MH]+ ions with little or no fragmentation. In the case of carboxylic acids, [M + 18]+ ions predominated but [MH]+ ions were also noted.
    [Show full text]
  • Limited Accessibility of Nitrogen Supplied As Amino Acids, Amides, and Amines As Energy
    bioRxiv preprint doi: https://doi.org/10.1101/2021.07.22.453390; this version posted July 22, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Limited accessibility of nitrogen supplied as amino acids, amides, and amines as energy 2 sources for marine Thaumarchaeota 3 4 Julian Damashek1,5, Barbara Bayer2,6, Gerhard J. Herndl2,3, Natalie J. Wallsgrove4, Tamara 5 Allen4, Brian N. Popp4, James T. Hollibaugh1 6 7 1Department of Marine Sciences, University of Georgia, Athens, GA, USA 8 2Department of Limnology and Bio-Oceanography, University of Vienna, Vienna, Austria 9 3Department of Marine Microbiology and Biogeochemistry, NIOZ, Royal Netherlands Institute 10 for Sea Research, Utrecht University, Utrecht, The Netherlands 11 4Department of Geology and Geophysics, University of Hawai’i at Manoa, Honolulu, HI, USA 12 5Present address: Department of Biology, Utica College, Utica, NY, USA 13 6Present address: Department of Ecology, Evolution, and Marine Biology, University of 14 California, Santa Barbara, CA 15 Corresponding authors: 16 Julian Damashek, 1600 Burrstone Road, Utica, NY 13502 • T: (315) 223-2326, F: (315) 792- 17 3831 • [email protected] 18 James T. Hollibaugh, 325 Sanford Drive, Athens, GA 30602 • T: (706) 542-7671, F: (706) 542- 19 5888 • [email protected] 20 Running title: DON oxidation by marine Thaumarchaeota 21 Keywords: Thaumarchaeota, nitrification, dissolved organic nitrogen, polyamines, reactive 22 oxygen species, archaea 23 Version 1 for biorXiv, 7/22/2021 bioRxiv preprint doi: https://doi.org/10.1101/2021.07.22.453390; this version posted July 22, 2021.
    [Show full text]
  • A Proposed Function for Spermine and Spermidine: Protection of Replicating DNA Against Damage by Singlet Oxygen (Sinlet Oxygen Q /Polymes) AHSAN U
    Proc. Natl. Acad. Sci. USA Vol. 89, pp. 11426-11427, December 1992 Biophysics A proposed function for spermine and spermidine: Protection of replicating DNA against damage by singlet oxygen (sinlet oxygen q /polymes) AHSAN U. KHANt, YING-HUA MEIt, AND THR3ISE WILSON* tDepartment of Pathology, Harvard Medical School, Boston, MA 02115; and *Department of Cellular and Developmental Biology, Harvard University, Cambridge, MA 02138 Communicated by Michael Kasha, August 31, 1992 (receivedfor review February 19, 1992) ABSTRACT Like al aiphatic i, the poya Aerated pyridine solutions of rubrene (0.22 mM) were spennne and sperme are ph l quncers of slt irradiated at 540 nm, and the concentration of rubrene was molecar oxygen (10?). The rate ant of these followed photometrically as a function of irradiation time, were determined in vitro with phocemcalygnrtoed down to a concentration ofrubrene ofabout one-halfits initial and the hydocbo rubrene a subste, i pyridie. At concentration; this was repeated in the presence of different milhmolar concentrt, Apmine and mide shol concentrations ofamines in the millimolarrange. Underthese quec 'o0 in vivo and prevt It from d DNA. It in conditions, ko/kA, the ratio of the pseudo-first-order rate proposed that a bk al nln of poyams I the pro- constant of decay of rubrene without amine to that with tection of repliang DNA against oxidative dama. amine, can be treated in a Stern-Volmer fashion. The slopes ofplots ofko/kA vs. amine concentration is kid, where is the ..... spermidine and spermine are widely distributed in lifetime of 102* in the absence of amine under the conditions nature, but their function is not known with any certainty" ofthe experiment.
    [Show full text]
  • Spermidine for a Long, Dementia-Free Life?
    Global journal of Pharmacy & pharmaceutical Science ISSN:2573-2250 Mini Review Glob J Pharmaceu Sci Volume 2 Issue 1 - April 2017 Copyright © All rights are reserved by Dimitrios Tsikas DOI: 10.19080/GJPPS.2017.02.555576 Spermidine for a Long, Dementia-Free Life? Tsikas D*, Erik Hanff and Gorig Brunner Core Unit Proteomics, Hannover Medical School, Germany Submission: March 28, 2017; Published: April 27, 2017 *Corresponding author: Dimitrios Tsikas, Core Unit Proteomics, Hannover Medical School, Germany, Tel: E-mail: Abstract Spermidine, N-(3-aminopropyl) butane-1,4-diamine, is an endogenous basic compound known for more than 90 years. The biosynthesis of spermidine, its pharmacological properties including distribution, metabolism and excretion have been thoroughly investigated. Spermidine and other polyamines have been early associated with growth and aging, and were found to stabilize various cellular and subcellular components including nucleic acids due to their polyvalent cationic structures. Polyamines including spermidine have been found at elevated circulating and urinary concentrations in a variety of diseases including cancer and psoriasis. Thus, decreasing the concentration of polyamines mainly by inhibiting their biosynthesis is regarded as a realistic therapeutical strategy. Yet, more recent studies suggest that exogenous spermidine exerts beneficialSupplementation effects on the of brain the natural where compoundit protects fromspermidine age-induced has emerged memory as impairment, an autophagy protects and mitophagy the heart inducerand extents in a lifespan.mice model of aging and hypertension and lowered high blood pressure. In humans, high dietary spermidine intake was found to correlate with reduced blood pressure and decreased risk of cardiovascular disease and related death. Scientists in this area of research suggest that integration of spermidine in common diets may represent a cardio- and vascular-protective autophagy inducer in humans.
    [Show full text]
  • Putrescine and Spermidine Control Degradation and Synthesis Of
    THEJOURNAL OF BIOLOGICALCHEMISTRY Vol. 263. No. 20, Issue of July 15, pp. 10005-10008, 1988 0 1988 by The American Society for Biochemistry and Molecular Biology, Inc. Printed in U.S. A. Putrescine and Spermidine Control Degradation andSynthesis of Ornithine Decarboxylase in Neurospora crassa” (Received for publication, November 24, 1987) Glenn R. Barnett$, Manouchehr Seyfzadeh, and Rowland H. Davis4 From the Department of Molecular Biology and Biochemistry, University of California, Iruine, Imine, California 9271 7 Neurospora crmsa mycelia, when starvedfor poly- cells of N. crassa, and the regulatory pools are small (6, 10, amines, have 50-70-fold more ornithine decarboxyl- 11). (There is little spermine in N. crassa, and it has little ase activity and enzyme protein than unstarved my- effect on ornithine decarboxylase, even when elevated in celia.Using isotopic labeling and immunoprecipita- cellular concentration (6).)Because of continuing sequestra- tion, we determined the half-lifeand the synthetic rate tion of newly made polyamines, ornithine decarboxylase re- of the enzyme inmycelia differing in the rates of sponds much more readily to the rateof polyamine synthesis synthesis of putrescine, the product of ornithine decar- than to the pools present at any given time (6). For this boxylase, and spermidine, the main end-product of the reason, and because putrescine and spermidine are absorbed polyamine pathway. When the pathway was blocked poorly from the medium, we have manipulated the biosyn- between putrescine and spermidine, ornithine decar- boxylase synthesis rose 4-5-fold,regardless of the ac- thetic pathway (Fig. 1) in order to relate ornithine decarbox- cumulation of putrescine. This indicates that spermi- ylase regulation to thepotential metabolic signals, putrescine dine is a specific signal for the repression of enzyme and spermidine.
    [Show full text]