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Plant Life MagillS Encyclopedia of Science
MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE Volume 4 Sustainable Forestry–Zygomycetes Indexes Editor Bryan D. Ness, Ph.D. Pacific Union College, Department of Biology Project Editor Christina J. Moose Salem Press, Inc. Pasadena, California Hackensack, New Jersey Editor in Chief: Dawn P. Dawson Managing Editor: Christina J. Moose Photograph Editor: Philip Bader Manuscript Editor: Elizabeth Ferry Slocum Production Editor: Joyce I. Buchea Assistant Editor: Andrea E. Miller Page Design and Graphics: James Hutson Research Supervisor: Jeffry Jensen Layout: William Zimmerman Acquisitions Editor: Mark Rehn Illustrator: Kimberly L. Dawson Kurnizki Copyright © 2003, by Salem Press, Inc. All rights in this book are reserved. No part of this work may be used or reproduced in any manner what- soever or transmitted in any form or by any means, electronic or mechanical, including photocopy,recording, or any information storage and retrieval system, without written permission from the copyright owner except in the case of brief quotations embodied in critical articles and reviews. For information address the publisher, Salem Press, Inc., P.O. Box 50062, Pasadena, California 91115. Some of the updated and revised essays in this work originally appeared in Magill’s Survey of Science: Life Science (1991), Magill’s Survey of Science: Life Science, Supplement (1998), Natural Resources (1998), Encyclopedia of Genetics (1999), Encyclopedia of Environmental Issues (2000), World Geography (2001), and Earth Science (2001). ∞ The paper used in these volumes conforms to the American National Standard for Permanence of Paper for Printed Library Materials, Z39.48-1992 (R1997). Library of Congress Cataloging-in-Publication Data Magill’s encyclopedia of science : plant life / edited by Bryan D. -
New Records of Benthic Marine Algae and Cyanobacteria for Costa Rica, and a Comparison with Other Central American Countries
Helgol Mar Res (2009) 63:219–229 DOI 10.1007/s10152-009-0151-1 ORIGINAL ARTICLE New records of benthic marine algae and Cyanobacteria for Costa Rica, and a comparison with other Central American countries Andrea Bernecker Æ Ingo S. Wehrtmann Received: 27 August 2008 / Revised: 19 February 2009 / Accepted: 20 February 2009 / Published online: 11 March 2009 Ó Springer-Verlag and AWI 2009 Abstract We present the results of an intensive sampling Rica; we discuss this result in relation to the emergence of program carried out from 2000 to 2007 along both coasts of the Central American Isthmus. Costa Rica, Central America. The presence of 44 species of benthic marine algae is reported for the first time for Costa Keywords Marine macroalgae Á Cyanobacteria Á Rica. Most of the new records are Rhodophyta (27 spp.), Costa Rica Á Central America followed by Chlorophyta (15 spp.), and Heterokontophyta, Phaeophycea (2 spp.). Overall, the currently known marine flora of Costa Rica is comprised of 446 benthic marine Introduction algae and 24 Cyanobacteria. This species number is an under estimation, and will increase when species of benthic The marine benthic flora plays an important role in the marine algae from taxonomic groups where only limited marine environment. It forms the basis of many marine information is available (e.g., microfilamentous benthic food chains and harbors an impressive variety of organ- marine algae, Cyanobacteria) are included. The Caribbean isms. Fish, decapods and mollusks are among the most coast harbors considerably more benthic marine algae (318 prominent species associated with the marine flora, which spp.) than the Pacific coast (190 spp.); such a trend has serves these animals as a refuge and for alimentation (Hay been observed in all neighboring countries. -
The Identification of Functional, Sequestered, Symbiotic Chloroplasts
University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School 2006 The identification of functional, sequestered, symbiotic chloroplasts in Elysia clarki: A crucial step in the study of horizontally transferred, nuclear algal genes Nicholas E. Curtis University of South Florida Follow this and additional works at: http://scholarcommons.usf.edu/etd Part of the American Studies Commons Scholar Commons Citation Curtis, Nicholas E., "The identification of functional, sequestered, symbiotic chloroplasts in Elysia clarki: A crucial step in the study of horizontally transferred, nuclear algal genes" (2006). Graduate Theses and Dissertations. http://scholarcommons.usf.edu/etd/2496 This Dissertation is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. The Identification of Functional, Sequestered, Symbiotic Chloroplasts in Elysia clarki: A Crucial Step in the Study of Horizontally Transferred, Nuclear Algal Genes by Nicholas E. Curtis A thesis submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy Department of Biology College of Arts and Sciences University of South Florida Major Professor: Sidney K. Pierce, Jr., Ph.D. Clinton J. Dawes, Ph.D. Kathleen M. Scott, Ph.D. Brian T. Livingston, Ph.D. Date of Approval: June 15, 2006 Keywords: Bryopsidales, kleptoplasty, sacoglossan, rbcL, chloroplast symbiosis Penicillus, Halimeda, Bryopsis, Derbesia © Copyright 2006, Nicholas E. Curtis Note to Reader The original of this document contains color that is necessary for understanding the data. The original dissertation is on file with the USF library in Tampa, Florida. -
Analysis of the Mycosporine-Like Amino Acid (MAA) Pattern of the Salt Marsh Red Alga Bostrychia Scorpioides
marine drugs Article Analysis of the Mycosporine-Like Amino Acid (MAA) Pattern of the Salt Marsh Red Alga Bostrychia scorpioides Maria Orfanoudaki 1 , Anja Hartmann 1,*, Julia Mayr 1,Félix L. Figueroa 2 , Julia Vega 2 , John West 3, Ricardo Bermejo 4 , Christine Maggs 5 and Markus Ganzera 1 1 Institute of Pharmacy/Pharmacognosy, University of Innsbruck, Innrain 80-82, 6020 Innsbruck, Austria; [email protected] (M.O.); [email protected] (J.M.); [email protected] (M.G.) 2 Experimental Centre Grice-Hutchinson, Institute of Blue Biotechnology and Development (IBYDA), University of Malaga, 29004 Malaga, Spain; [email protected] (F.L.F.); [email protected] (J.V.) 3 School of BioSciences, University of Melbourne, Parkville, VIC 3010, Australia; [email protected] 4 Earth and Ocean Sciences, School of Natural Sciences and Ryan Institute, National University of Ireland, H91 TK33 Galway, Ireland; [email protected] 5 Medical Biology Centre, School of Biological Sciences, Queen’s University Belfast, Belfast BT22 1PF, UK; [email protected] * Correspondence: [email protected]; Tel.: +43-512-507-58430 Abstract: This study presents the validation of a high-performance liquid chromatography diode array detector (HPLC-DAD) method for the determination of different mycosporine-like amino acids (MAAs) in the red alga Bostrychia scorpioides. The investigated MAAs, named bostrychines, have only been found in this specific species so far. The developed HPLC-DAD method was successfully applied for the quantification of the major MAAs in Bostrychia scorpioides extracts, collected from four Citation: Orfanoudaki, M.; different countries in Europe showing only minor differences between the investigated samples. -
Organellar Genome Evolution in Red Algal Parasites: Differences in Adelpho- and Alloparasites
University of Rhode Island DigitalCommons@URI Open Access Dissertations 2017 Organellar Genome Evolution in Red Algal Parasites: Differences in Adelpho- and Alloparasites Eric Salomaki University of Rhode Island, [email protected] Follow this and additional works at: https://digitalcommons.uri.edu/oa_diss Recommended Citation Salomaki, Eric, "Organellar Genome Evolution in Red Algal Parasites: Differences in Adelpho- and Alloparasites" (2017). Open Access Dissertations. Paper 614. https://digitalcommons.uri.edu/oa_diss/614 This Dissertation is brought to you for free and open access by DigitalCommons@URI. It has been accepted for inclusion in Open Access Dissertations by an authorized administrator of DigitalCommons@URI. For more information, please contact [email protected]. ORGANELLAR GENOME EVOLUTION IN RED ALGAL PARASITES: DIFFERENCES IN ADELPHO- AND ALLOPARASITES BY ERIC SALOMAKI A DISSERTATION SUBMITTED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY IN BIOLOGICAL SCIENCES UNIVERSITY OF RHODE ISLAND 2017 DOCTOR OF PHILOSOPHY DISSERTATION OF ERIC SALOMAKI APPROVED: Dissertation Committee: Major Professor Christopher E. Lane Jason Kolbe Tatiana Rynearson Nasser H. Zawia DEAN OF THE GRADUATE SCHOOL UNIVERSITY OF RHODE ISLAND 2017 ABSTRACT Parasitism is a common life strategy throughout the eukaryotic tree of life. Many devastating human pathogens, including the causative agents of malaria and toxoplasmosis, have evolved from a photosynthetic ancestor. However, how an organism transitions from a photosynthetic to a parasitic life history strategy remains mostly unknown. Parasites have independently evolved dozens of times throughout the Florideophyceae (Rhodophyta), and often infect close relatives. This framework enables direct comparisons between autotrophs and parasites to investigate the early stages of parasite evolution. -
An Annotated List of Marine Chlorophyta from the Pacific Coast of the Republic of Panama with a Comparison to Caribbean Panama Species
Nova Hedwigia 78 1•2 209•241 Stuttgart, February 2004 An annotated list of marine Chlorophyta from the Pacific Coast of the Republic of Panama with a comparison to Caribbean Panama species by Brian Wysor The University of Louisiana at Lafayette, Department of Biology PO Box 42451, Lafayette, LA 70504-2451, USA. Present address: Bigelow Laboratory for Ocean Sciences PO Box 475, McKown Point, West Boothbay Harbor, ME 04575, USA. With 21 figures, 3 tables and 1 appendix Wysor, B. (2004): An annotated list of marine Chlorophytafrom the Pacific Coast of the Republic of Panama with a comparison to Caribbean Panama species. - Nova Hedwigia 78: 209-241. Abstract: Recent study of marine macroalgal diversity of the Republic of Panama has led to a substantial increase in the number of seaweed species documented for the country. In this updated list of marine algae based on collections made in 1999 and reports from the literature, 44 Chlorophyta (43 species and one variety) are documented for the Pacific coast of Panama, including 27 new records. A comparison of chlorophyte diversity along Caribbean and Pacific coasts revealed greater diversity at nearly all taxonomic levels in the Caribbean flora. Differences in environmentalregime (e.g., absence of sea grasses, lower abundance and diversity of hermatypic corals, and greater tidal range along the Pacific coast) explained some of the discrepancy in diversity across the isthmus. Fifteen taxa were common to Caribbean and Pacific coasts, but the number of amphi-isthmian taxa nearly doubled when taxa from nearby floras were includedin the estimate. These taxa may represent daughter populations of a formerly contiguouspopulation that was severed by the emerging Central American Isthmus. -
Rhodophyta, Rhodomelaceae): an Important Systematic Character by Celia M
ATOLL RESEARCH BULLETIN NO. 312 PROCARP STRUCI'URE IN SOME CARIBBEAN SPECIES OF BOSTRYCHLA MONTAGNE (RHODOPHYTA, RHODOMELACEAE): AN IMPORTANT SYSTEMATIC CHARACTER BY CELIA M. SMITH, AND JAMES N. NORRIS ISSUED BY NATIONAL MUSEUM OF NATUFtAL HISTORY SMITHSONIAN INSTITUTION W&HINGTON,D.C.,U.SA. October 1988 PROCARP STRUCTURE IN SOME CARIBBEAN SPECIES OF BOSTRYCHU MONTAGNE (RHODOPHYTA, RHODOMELACEAE): - AN IMPORTANT SYSTEMATIC CHARACTER ABSTRACT Newly elucidated features which can be used for taxonomic purposes are shown by the pre- fertilization procarp structure in species of the red alga Bostrychia Mont. Because female gametophytes are apparently rare in Caribbean field populations, having been seldom collected, these reproductive characteristics have not been evaluated previously, but may provide greater stability to the systematics of Bosbychia which is now based almost entirely on vegetative characteristics. Four species of Bosbychia, as known from the Caribbean, B. montagnei Harv., B. binden Harv., B. tenella (Lamour.) J. Ag., and B. mdicans f. moniliformis Post, and one taxon of uncertain status, B. sp.?, were grown in culture and showed species specific features. Pre-fertilization structures that were quantified revealed differences in the length and width of trichogynes, the distribution and number of procarps present in fertile regions of the branchlets, and the number of cells of the fertile region. These differences show that reproductive structures are important taxonomic characters for species of Bosbychia and support the suggestion that Bostrychia is a primitive genus in the Rhodomelaceae. INTRODUCTION The red algal genus Bostrychia Montagne (1842, p.39) (Ceramiales, Rhodomelaceae) is wide- spread, occurring from tropical to cool-temperate regions, and usually associated with mangroves. -
Poblaciones De Macroalgas Asociadas a Raices Y Neumatoforos De Mangle: Estero El Tamarindo Departamento De La Union El Salvador”
UNIVERSIDAD DE EL SALVADOR FACULTAD DE CIENCIAS NATURALES Y MATEMÁTICA ESCUELA DE BIOLOGÍA “POBLACIONES DE MACROALGAS ASOCIADAS A RAICES Y NEUMATOFOROS DE MANGLE: ESTERO EL TAMARINDO DEPARTAMENTO DE LA UNION EL SALVADOR” TRABAJO DE GRADUACIÓN PRESENTADO POR: BR. CANDIDA ELENA CRUZ MADRID PARA OPTAR AL GRADO DE: LICENCIADA EN BIOLOGÍA CIUDAD UNIVERSITARIA, ABRIL 2010 UNIVERSIDAD DE EL SALVADOR FACULTAD DE CIENCIAS NATURALES Y MATEMÁTICA ESCUELA DE BIOLOGÍA “POBLACIONES DE MACROALGAS ASOCIADAS A RAICES Y NEUMATOFOROS DE MANGLE: ESTERO EL TAMARINDO DEPARTAMENTO DE LA UNION EL SALVADOR” TRABAJO DE GRADUACIÓN PRESENTADO POR: BR. CANDIDA ELENA CRUZ MADRID PARA OPTAR AL GRADO DE: LICENCIADA EN BIOLOGÍA ASESORA: ____________________ M.Sc. OLGA LIDIA TEJADA CIUDAD UNIVERSITARIA, ABRIL DE 2010 ii UNIVERSIDAD DE EL SALVADOR FACULTAD DE CIENCIAS NATURALES Y MATEMÁTICA ESCUELA DE BIOLOGÍA “POBLACIONES DE MACROALGAS ASOCIADAS A RAICES Y NEUMATOFOROS DE MANGLE: ESTERO EL TAMARINDO DEPARTAMENTO DE LA UNION, EL SALVADOR” TRABAJO DE GRADUACIÓN PRESENTADO POR: BR. CANDIDA ELENA CRUZ MADRID PARA OPTAR AL GRADO DE: LICENCIADA EN BIOLOGÍA JURADO: ____________________ LIC. RODOLFO FERNANDO MENJIVAR JURADO: ____________________ M.Sc. FRANCISCO ANTONIO CHICAS BATRES i CIUDAD UNIVERSITARIA, ABRIL DE 2010 AUTORIDADES UNIVERSITARIAS RECTOR: ING. RUFINO ANTONIO QUEZADA SANCHEZ SECRETARIO GENERAL: LIC. DOUGLAS VLADIMIR ALFARO CHAVEZ FISCAL: DR. RENE MADECADEL PERLA JIMENEZ DECANO DE LA FACULTAD: DR. RAFAEL ANTONIO GOMEZ ESCOTO DIRECTORA DE LA ESCUELA DE BIOLOGIA: M.Sc. NOHEMY ELIZABETH VENTURA CENTENO ii CIUDAD UNIVERSITARIA, ABRIL 2010 ASESORES Y JURADO ASESORES: M.Sc. OLGA LIDIA TEJADA JURADO EVALUADOR: LIC. RODOLFO FERNANDO MENJIVAR JURADO EVALUADOR: M.Sc. FRANCISCO ANTONIO CHICAS BATRES iii CIUDAD UNIVERSITARIA, ABRIL 2010 DEDICATORIA A Dios todopoderoso por permitirme llegar a mi meta con paciencia y determinación En memoria A mi abuelo Pablo Antonio Turcios (Q. -
A Multi-Locus Time-Calibrated Phylogeny of the Siphonous Green Algae
Molecular Phylogenetics and Evolution 50 (2009) 642–653 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev A multi-locus time-calibrated phylogeny of the siphonous green algae Heroen Verbruggen a,*, Matt Ashworth b, Steven T. LoDuca c, Caroline Vlaeminck a, Ellen Cocquyt a, Thomas Sauvage d, Frederick W. Zechman e, Diane S. Littler f, Mark M. Littler f, Frederik Leliaert a, Olivier De Clerck a a Phycology Research Group and Center for Molecular Phylogenetics and Evolution, Ghent University, Krijgslaan 281, Building S8, 9000 Ghent, Belgium b Section of Integrative Biology, University of Texas at Austin, 1 University Station MS A6700, Austin, TX 78712, USA c Department of Geography and Geology, Eastern Michigan University, Ypsilanti, MI 48197, USA d Botany Department, University of Hawaii at Manoa, 3190 Maile Way, Honolulu, HI 96822, USA e Department of Biology, California State University at Fresno, 2555 East San Ramon Avenue, Fresno, CA 93740, USA f Department of Botany, National Museum of Natural History, Smithsonian Institution, Washington, DC 20560, USA article info abstract Article history: The siphonous green algae are an assemblage of seaweeds that consist of a single giant cell. They com- Received 4 November 2008 prise two sister orders, the Bryopsidales and Dasycladales. We infer the phylogenetic relationships Revised 15 December 2008 among the siphonous green algae based on a five-locus data matrix and analyze temporal aspects of their Accepted 18 December 2008 diversification using relaxed molecular clock methods calibrated with the fossil record. The multi-locus Available online 25 December 2008 approach resolves much of the previous phylogenetic uncertainty, but the radiation of families belonging to the core Halimedineae remains unresolved. -
Associated Species from Guam (Bryopsidales, Chlorophyta)1
J. Phycol. 48, 1090–1098 (2012) Ó 2012 Phycological Society of America DOI: 10.1111/j.1529-8817.2012.01199.x RHIPILIA COPPEJANSII, A NEW CORAL REEF-ASSOCIATED SPECIES FROM GUAM (BRYOPSIDALES, CHLOROPHYTA)1 Heroen Verbruggen2,3 Phycology Research Group, Ghent University, Krijgslaan 281 (S8), B-9000 Gent, Belgium and Tom Schils 3 University of Guam Marine Laboratory, UOG Station, Mangilao, Guam 96923, USA The new species Rhipilia coppejansii is described The species of the Udoteaceae cover a wide spec- from Guam. This species, which has the external trum of morphologies and the great majority of appearance of a Chlorodesmis species, features tena- them are calcified. Members of the genus Udotea cula upon microscopical examination, a diagnostic have multiaxial stipes and fan- or funnel-shaped character of Rhipilia. This unique morphology, blades (Littler and Littler 1990b). Rhipidosiphon is along with the tufA and rbcL data presented herein, structurally similar, but has a much simpler uniaxial set this species apart from others in the respective stipe and a single-layered blade (Littler and Littler genera. Phylogenetic analyses show that the taxon is 1990a, Coppejans et al. 2011). Penicillus and Rhipo- nested within the Rhipiliaceae. We discuss the diver- cephalus both consist of a stipe subtending a cap. sity and possible adaptation of morphological types Whereas, in Penicillus, the cap has a brush-like struc- in the Udoteaceae and Rhipiliaceae. ture, that of Rhipocephalus consists of numerous imbricated blades along a central stalk (Littler and Key index words: Bryopsidales; Chlorodesmis;DNA Littler 2000). In addition to these rather complex barcodes; morphology; rbcL; Rhipilia; taxonomy; thallus architectures, the Udoteaceae also contain tufA the genus Chlorodesmis. -
Chemotaxonomic Study of Bostrychia Spp. (Ceramiales, Rhodophyta) Based on Their Mycosporine-Like Amino Acid Content
Supplementary Material Chemotaxonomic Study of Bostrychia spp. (Ceramiales, Rhodophyta) Based on Their Mycosporine-like Amino Acid Content Maria Orfanoudaki 1, Anja Hartmann 1,*, Mitsunobu Kamiya 2, John West 3 and Markus Ganzera 1 1 Institute of Pharmacy, Pharmacognosy, University of Innsbruck, Innrain 80-82, Innsbruck 6020, Austria; [email protected] (M.O.); [email protected] (M.G.) 2 Department of Ocean Sciences, School of Marine Resources and Environment, Tokyo University of Marine Science and Technology, Japan 4-5-7 Konan, Minato-ku, Tokyo 108-8477, Japan; [email protected] (M. K.) 3 School of BioSciences, University of Melbourne, Parkville, 3010 Victoria, Australia; [email protected] (J. W.) * Correspondence: [email protected] (A.H.); Tel.: +43 512 507-58430 Contents Figure S1 UV and Mass spectrum of compound the unidentified MAA at 7.6 min .................... 2 Figure S2 UV and Mass spectrum of compound the unidentified MAA at 9.9 min .................... 2 Figure S3 UV and Mass spectrum of compound the unidentified MAA at 8.0 min .................... 3 Figure S4 UV and Mass spectrum of compound the unidentified MAA at 21.2 min .................. 4 Table S1. Quantitative HPLC-DAD results for compounds 1-12 in the B. simpliciuscula/B. kingii and the B. moritziana/B. radicans complex ........................................................................................... 5 Table S2. Quantitative HPLC-DAD results for compounds 1-12 in Bostrychia spp. ................... 10 Table S3. Overview of the investigated samples of Bostrychia spp., their collection sites and dates. ...................................................................................................................................................... 16 Figure S1. UV and mass spectrum of compound the unidentified MAA at 7.6 min Figure S2. -
Halimeda (Green Siphonous Algae) from the Paleogene of (Morocco) – Taxonomy, Phylogeny and Paleoenvironment
CONTENTS Volume 53 Numbers1&2 2007 GENERAL MICROPALEONTOLOGY 1 Ovidiu N. Dragastan and Hans-Georg Herbig Halimeda (green siphonous algae) from the Paleogene of (Morocco) – Taxonomy, phylogeny and paleoenvironment TAXONOMY 73 Christopher W. Smart and Ellen Thomas Emendation of the genus Streptochilus Brönnimann and Resig 1971 (Foraminifera) and new species from the lower Miocene of the Atlantic and Indian Oceans PALEOCLIMATOLOGY 105 Harry J. Dowsett and Marci M. Robinson Mid-Pliocene planktic foraminifer assemblage of the North Atlantic Ocean BIOSTRATIGRAPHY 127 Mahmoud Faris and Aziz Mahmoud Abu Shama Nannofossil biostratigraphy of the Paleocene-lower Eocene succession in the Thamad area, east central Sinai, Egypt 145 Itsuki Suto The Oligocene and Miocene record of the diatom resting spore genus Liradiscus Greville in the Norwegian Sea TAXONOMIC NOTE 104 Elizabeth S. Carter New names for two Triassic radiolarian genera from the Queen Charlotte Islands: Ellisus replaces Harsa Carter 1991 non Marcus 1951; Serilla replaces Risella Carter 1993 non Gray 1840 (1847) ANNOUNCEMENT 160 “Catbox” — Ellis and Messina Catalogues on one DVD Halimeda (green siphonous algae) from the Paleogene of (Morocco) – Taxonomy, phylogeny and paleoenvironment Ovidiu N. Dragastan1 and Hans-Georg Herbig2 1University of Bucharest, Department of Geology and Paleontology, Bd. N. Balcescu No.1, 010041, Bucharest, Romania email: [email protected] 2Universität zu Köln, Institut für Geologie und Mineralogie, Arbeitsgruppe für Paläontologie und Historische Geologie, Zülpicher Strasse 49a, 50674 Köln, Germany email: [email protected] ABSTRACT: Calcareous algae of order Bryopsidales, family Halimedaceae abound in shallow marine ramp facies of the Jbel Guersif Formation (late Thanetian), Ait Ouarhitane Formation (middle – late Ypresian) and Jbel Tagount Formation (latest Ypresian to late Lutetian or latest Bartonian), southern rim of central High Atlas, Morocco.