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Antibiotic Adjuvants  Bioorganic & Medicinal Chemistry Letters 27 (2017) 4221–4228 Contents lists available at ScienceDirect Bioorganic & Medicinal Chemistry Letters journal homepage: www.elsevier.com/locate/bmcl Digest Antibiotic adjuvants – A strategy to unlock bacterial resistance to antibiotics Concepción González-Bello Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, Jenaro de la Fuente s/n, 15782 Santiago de Compostela, Spain article info abstract Article history: Resistance to available antibiotics in pathogenic bacteria is currently a global challenge since the number Received 23 June 2017 of strains that are resistant to multiple types of antibiotics has increased dramatically each year and has Revised 8 August 2017 spread worldwide. To unlock this problem, the use of an ‘antibiotic adjuvant’ in combination with an Accepted 13 August 2017 antibiotic is now being exploited. This approach enables us to prolong the lifespan of these life-saving Available online 14 August 2017 drugs. This digests review provides an overview of the main types of antibiotic adjuvants, the basis of their operation and the remaining issues to be tackled in this field. Particular emphasis is placed on those Keywords: compounds that are already in clinical development, namely b-lactamase inhibitors. Resistance breakers Ó 2017 The Author(s). Published by Elsevier Ltd. This is an open access article under the CC BY-NC-ND Antibiotic potentiators ESKAPE pathogens license (http://creativecommons.org/licenses/by-nc-nd/4.0/). b-Lactamase inhibitors Efflux pump inhibitors Permeabilizers The discovery of penicillin during the first half of the 20th cen- Escherichia coli, Enterobacter spp., Serratia spp., Proteus spp., Provi- tury and all the antibiotics developed thereafter undoubtedly rep- dencia spp., and Morganella spp.). These bacteria are resistant to resents one of the most important achievements in medicine. carbapenems, which are the only remaining therapy that is often These drugs have not only saved millions of lives but are also a considered as antibiotics of last resort.4 To this list we must add key tool in the success of common hospital procedures such as Mycobacterium tuberculosis, the causative agent of tuberculosis, general surgery, organ transplantation, dialysis for renal failure which is already considered as a top global health priority. The and chemotherapy for cancer, for which their capacity to treat sec- high and medium categories involve increasingly drug-resistant ondary infections is crucial. Regrettably, the ability of these drugs bacteria that require more monitoring and prevention activities. to cure infectious diseases is now in serious danger due to the This priority list of bacterial pathogens is an excellent guide for emergence and spread worldwide of strains that are multidrug- the prioritization of incentives and funding for R&D aimed at dis- resistant to antibiotics.1 The European Center for Disease Preven- covering new and effective antibacterial therapies, which is tion and Control (ECDC) estimates that about 25,000 Europeans undoubtedly necessary.5 die each year as a direct consequence of a multidrug-resistant A recent study has shown that resistance to antibiotics is a nat- infection and €1.5 billion is spent in extra patient care costs.2 ural phenomenon that predates the golden age of antibiotic ther- According to the U.S. Center for Disease Control & Prevention apy due to the intrinsic evolutionary character and adaptability (CDC), a similar number of deaths also occur in the USA. of bacteria.6 Nonetheless, human behavior has undoubtedly been The WHO has recently published a global priority pathogens list decisive in reaching bacterial resistance to the current alarming of antibiotic-resistant bacteria (Table 1).3 Based on diverse criteria levels. One of the key factors is the abuse and misuse of these drugs such as mortality, prevalence of resistance, treatability or current over the years in humans, animals and plants, including for the pipeline, bacterial pathogens have been ranked as critical, high treatment of non-bacterial diseases. As shown recently, this behav- and medium. This study revealed that the situation is highly criti- ior has favored the appearance of tolerance and this, in turn, facil- cal for healthcare-associated infections caused by the Gram-nega- itates the emergence of resistance.7 Another critical point that is tive ESKAPE pathogens Acinetobacter baumannii, Pseudomonas limiting our capacity to deal with multidrug resistant bacteria is aeruginosa and Enterobacteriaceae (including Klebsiella pneumoniae, the flagging investment in R&D on novel antibiotics by the large pharmaceutical companies since the 1960s. This is mainly due E-mail address: [email protected] to: (a) the huge economic cost of bringing a drug to the market; http://dx.doi.org/10.1016/j.bmcl.2017.08.027 0960-894X/Ó 2017 The Author(s). Published by Elsevier Ltd. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). 4222 C. González-Bello / Bioorganic & Medicinal Chemistry Letters 27 (2017) 4221–4228 Table 1 WHO priority bacterial pathogens list for research and development of new antibiotics.a Priority Bacterial Pathogen Critical Acinetobacter baumannii, carbapenem-resistant Pseudomonas aeruginosa, carbapenem-resistant Enterobacteriaceae,b carbapenem-resistant, 3rd generation cephalosporin-resistant Mycobacteria, including Mycobacterium tuberculosis High Enterococcus faecium, vancomycin-resistant Staphylococcus aureus, methicillin-resistant, vancomycin intermediate and resistant Helicobacter pylori, clarithromycin-resistant Campylobacter, fluoroquinolone-resistant Salmonella spp., fluoroquinolone-resistant Neisseria gonorrhoeae, 3rd generation cephalosporin-resistant, fluoroquinolone-resistant Medium Streptococcus pneumoniae, penicillin-non-susceptible Haemophilus influenza, ampicillin-resistant Shigella spp., fluoroquinolone-resistant Fig. 1. Antibiotics in clinical trials that have a new mechanism of action. a Ref. 3. b It includes Klebsiella pneumonia, Escherichia coli, Enterobacter spp., Serratia spp., Proteus spp., and Providencia spp., Morganella spp. Taken together, it seems clear that it is crucial to search not only for more effective anti-infective drugs but also to develop novel chemical entities with new mechanisms of action. A great deal of (b) the low profit margin for non-chronic diseases of this type com- effort is currently being devoted, particularly in academia, to inves- pared with continuing ones such as cancer or mental diseases and tigate the potential of unexploited essential processes in bacteria (c) the belief that the great therapeutic arsenal available was suffi- and to develop novel scaffolds that target them, as well as to study cient to deal with this issue.8 As a consequence, the clinical pipe- the biochemical basis of these targets in detail. The increasing line for antibiotics is almost empty compared to more than 500 availability of bacterial genome sequences in general, and the iden- chronic-disease drugs for which resistance is not an issue. tification of the essential genes for bacterial survival in particular, It is also relevant that most of the antibiotics in clinical use tar- have contributed greatly to the progress made in this area of get a small number and the same type of key functions for bacterial research. However, the development of antibiotics that act on survival and resistance to them is widespread and well known novel targets is a very challenging and expensive task, as evidenced (Table 2).9 by the fact that there are only two compounds in clinical trials that Specifically, the available antibiotics target: (1) cell-wall meet this premise. A good example is CARB-X (Combating Antibi- biosynthesis; (2) protein synthesis (subunit 30S or 50S of ribo- otic Resistant Bacteria Biopharmaceutical Accelerator), the world’s some); (3) DNA replication and repair (RNA polymerase, DNA gyr- largest public-private partnership, which was recently created and ase); (4) folic acid metabolism; and (5) membrane structure. An is devoted antibacterial preclinical R&D.11 Funded by BARDA and analysis of the antibiotics currently in clinical development (about the UK’s Wellcome Trust, and supported by NIAID, CARB-X will 40 small molecules) revealed that unfortunately this trend has not spend $450 million from 2017À2021 to bring innovative treat- changed significantly (Fig. S1).10 The Pew Charitable Trust high- ments toward clinical trials. In contrast, greater success has been lighted that nearly all of the antibiotics approved in the last achieved with those approaches that minimize the emergence 30 years are modifications of earlier classes to make them more and impact of resistance to antibiotics by the use of an ‘antibiotic efficient and robust against resistant bacteria. Specifically, only adjuvant’ in combination with an antibiotic. This booming and suc- two of them are compounds with a new mechanism of action cessful strategy will be the focus of this digest review. An overview (Fig. 1): (a) Brilacidin (PMX-30063, Phase 2, Cellceutix Corp.) is a of the recent efforts carried out on such combined therapies to face synthetic mimetic of host defense protein, which is the first line the challenge of multidrug resistance to antibiotics is reviewed. of defense against microbial infection in many species; and (b) Antibiotic Adjuvants: These
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