Status of the Open Sea Fisheries in the Alboran Sea Draft Internal Report
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Article Evolutionary Dynamics of the OR Gene Repertoire in Teleost Fishes
bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Article Evolutionary dynamics of the OR gene repertoire in teleost fishes: evidence of an association with changes in olfactory epithelium shape Maxime Policarpo1, Katherine E Bemis2, James C Tyler3, Cushla J Metcalfe4, Patrick Laurenti5, Jean-Christophe Sandoz1, Sylvie Rétaux6 and Didier Casane*,1,7 1 Université Paris-Saclay, CNRS, IRD, UMR Évolution, Génomes, Comportement et Écologie, 91198, Gif-sur-Yvette, France. 2 NOAA National Systematics Laboratory, National Museum of Natural History, Smithsonian Institution, Washington, D.C. 20560, U.S.A. 3Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, D.C., 20560, U.S.A. 4 Independent Researcher, PO Box 21, Nambour QLD 4560, Australia. 5 Université de Paris, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France 6 Université Paris-Saclay, CNRS, Institut des Neurosciences Paris-Saclay, 91190, Gif-sur- Yvette, France. 7 Université de Paris, UFR Sciences du Vivant, F-75013 Paris, France. * Corresponding author: e-mail: [email protected]. !1 bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract Teleost fishes perceive their environment through a range of sensory modalities, among which olfaction often plays an important role. -
FISH LIST WISH LIST: a Case for Updating the Canadian Government’S Guidance for Common Names on Seafood
FISH LIST WISH LIST: A case for updating the Canadian government’s guidance for common names on seafood Authors: Christina Callegari, Scott Wallace, Sarah Foster and Liane Arness ISBN: 978-1-988424-60-6 © SeaChoice November 2020 TABLE OF CONTENTS GLOSSARY . 3 EXECUTIVE SUMMARY . 4 Findings . 5 Recommendations . 6 INTRODUCTION . 7 APPROACH . 8 Identification of Canadian-caught species . 9 Data processing . 9 REPORT STRUCTURE . 10 SECTION A: COMMON AND OVERLAPPING NAMES . 10 Introduction . 10 Methodology . 10 Results . 11 Snapper/rockfish/Pacific snapper/rosefish/redfish . 12 Sole/flounder . 14 Shrimp/prawn . 15 Shark/dogfish . 15 Why it matters . 15 Recommendations . 16 SECTION B: CANADIAN-CAUGHT SPECIES OF HIGHEST CONCERN . 17 Introduction . 17 Methodology . 18 Results . 20 Commonly mislabelled species . 20 Species with sustainability concerns . 21 Species linked to human health concerns . 23 Species listed under the U .S . Seafood Import Monitoring Program . 25 Combined impact assessment . 26 Why it matters . 28 Recommendations . 28 SECTION C: MISSING SPECIES, MISSING ENGLISH AND FRENCH COMMON NAMES AND GENUS-LEVEL ENTRIES . 31 Introduction . 31 Missing species and outdated scientific names . 31 Scientific names without English or French CFIA common names . 32 Genus-level entries . 33 Why it matters . 34 Recommendations . 34 CONCLUSION . 35 REFERENCES . 36 APPENDIX . 39 Appendix A . 39 Appendix B . 39 FISH LIST WISH LIST: A case for updating the Canadian government’s guidance for common names on seafood 2 GLOSSARY The terms below are defined to aid in comprehension of this report. Common name — Although species are given a standard Scientific name — The taxonomic (Latin) name for a species. common name that is readily used by the scientific In nomenclature, every scientific name consists of two parts, community, industry has adopted other widely used names the genus and the specific epithet, which is used to identify for species sold in the marketplace. -
European Anchovy Engraulis Encrasicolus (Linnaeus, 1758) From
European anchovy Engraulis encrasicolus (Linnaeus, 1758) from the Gulf of Annaba, east Algeria: age, growth, spawning period, condition factor and mortality Nadira Benchikh, Assia Diaf, Souad Ladaimia, Fatma Z. Bouhali, Amina Dahel, Abdallah B. Djebar Laboratory of Ecobiology of Marine and Littoral Environments, Department of Marine Science, Faculty of Science, University of Badji Mokhtar, Annaba, Algeria. Corresponding author: N. Benchikh, [email protected] Abstract. Age, growth, spawning period, condition factor and mortality were determined in the European anchovy Engraulis encrasicolus populated the Gulf of Annaba, east Algeria. The age structure of the total population is composed of 59.1% females, 33.5% males and 7.4% undetermined. The size frequency distribution method shows the existence of 4 cohorts with lengths ranging from 8.87 to 16.56 cm with a predominance of age group 3 which represents 69.73% followed by groups 4, 2 and 1 with respectively 19.73, 9.66 and 0.88%. The VONBIT software package allowed us to estimate the growth parameters: asymptotic length L∞ = 17.89 cm, growth rate K = 0.6 year-1 and t0 = -0.008. The theoretical maximum age or tmax is 4.92 years. The height-weight relationship shows that growth for the total population is a major allometry. Spawning takes place in May, with a gonado-somatic index (GSI) of 4.28% and an annual mean condition factor (K) of 0.72. The total mortality (Z), natural mortality (M) and fishing mortality (F) are 2.31, 0.56 and 1.75 year-1 respectively, with exploitation rate E = F/Z is 0.76 is higher than the optimal exploitation level of 0.5. -
Fisheries Centre
Fisheries Centre The University of British Columbia Working Paper Series Working Paper #2015 - 80 Reconstruction of Syria’s fisheries catches from 1950-2010: Signs of overexploitation Aylin Ulman, Adib Saad, Kyrstn Zylich, Daniel Pauly and Dirk Zeller Year: 2015 Email: [email protected] This working paper is made available by the Fisheries Centre, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada. Reconstruction of Syria’s fisheries catches from 1950-2010: Signs of overexploitation Aylin Ulmana, Adib Saadb, Kyrstn Zylicha, Daniel Paulya, Dirk Zellera a Sea Around Us, Fisheries Centre, University of British Columbia, 2202 Main Mall, Vancouver, BC, V6T 1Z4, Canada b President of Syrian National Committee for Oceanography, Tishreen University, Faculty of Agriculture, P.O. BOX; 1408, Lattakia, Syria [email protected] (corresponding author); [email protected]; [email protected]; [email protected]; [email protected] ABSTRACT Syria’s total marine fisheries catches were estimated for the 1950-2010 time period using a reconstruction approach which accounted for all fisheries removals, including unreported commercial landings, discards, and recreational and subsistence catches. All unreported estimates were added to the official data, as reported by the Syrian Arab Republic to the United Nation’s Food and Agriculture Organization (FAO). Total reconstructed catch for 1950-2010 was around 170,000 t, which is 78% more than the amount reported by Syria to the FAO as their national catch. The unreported components added over 74,000 t of unreported catches, of which 38,600 t were artisanal landings, 16,000 t industrial landings, over 4,000 t recreational catches, 3,000 t subsistence catches and around 12,000 t were discards. -
Jennings Et Al., 2002)
1 Food Webs Archimer December 2017, Volume 13, Pages 33-37 http://dx.doi.org/10.1016/j.fooweb.2017.08.001 http://archimer.ifremer.fr http://archimer.ifremer.fr/doc/00395/50614/ © 2017 Published by Elsevier Inc. Investigating feeding ecology of two anglerfish species, Lophius piscatorius and Lophius budegassa in the Celtic Sea using gut content and isotopic analyses Issac Pierre 1, 2, Robert Marianne 2, Le Bris Hervé 1, Rault Jonathan 2, Pawlowski Lionel 2, Kopp Dorothee 2 1 ESE, Ecology and Ecosystem Health, Agrocampus Ouest, INRA, 35042, Rennes, France 2 Ifremer, Unité de Sciences et Technologies Halieutiques, Laboratoire de Technologie et Biologie Halieutique, 8 rue François Toullec, F-56100, Lorient, France Abstract : We used stable isotope ratio and gut content analyses to determine and compare the feeding ecology of two commercially important predator species, Lophius piscatorius and Lophius budegassa in the Celtic sea, where data concerning their trophic ecology remain sparse. This study included two areas and two size-classes, showing that anglerfish in the Celtic sea are mainly piscivorous top predators as observed in other marine waters. However, a substantial part of the diet of the fish in the small size classes consists of benthic macro-invertebrates, mainly Crustaceans. Despite the common knowledge that they are opportunistic predators that display a low degree of prey selectivity, our results suggest that the two species have different trophic niches when they occur in the same area. In the shallow area, both small and large individuals of L. budegassa seemed to prefer Crustacean prey, whereas L. piscatorius showed a clear shift from Crustaceans to fish prey with increasing size-class in the two areas. -
Sturgeons of the Caspian Sea and Ural River
Photo and image credits: Front Cover: Top left, beluga sturgeon (Huso huso); Top Right: Russian sturgeon (Acipenser gueldenstaedtii); Bottom: stellate sturgeon (Acipenser stellatus); Todd Stailey, Tennessee Aquarium. Back Cover: “FISH IS OUR TREASURE”, Phaedra Doukakis, Ph. D. IOCS; Page 1: Shannon Crownover, The Nature Conservancy; Page 6, 9, 10, 11: Phaedra Doukakis, Ph. D., IOCS; Page 4, 5, 7 designed by Grace Lewis. Brochure content was developed by Alison Ormsby, Ph.D. and Phaedra Doukakis, Ph. D. with editorial review by Yael Wyner, Ph. D. Layout was designed by Grace Lewis. The brochure was developed under a generous grant from Agip KCO. Agip KCO Tel.: international line: 1, K. Smagulov Street +39 02 9138 3300 Atyrau, 06002 Tel: local lines: Republic of Kazakhstan (+7) 7122 92 3300 Fax: (+7) 7122 92 3310 Designed and printed in Kazakhstan www.agipkco.com Sturgeons of the Caspian Sea and Ural River www.oceanconservationscience.org A Unique and Precious Resource What are Sturgeon? River, other rivers off the Caspian Sea are used by sturgeons for With bony plates called scutes on their bodies and ancestors that reproduction, including the Volga River in Russia and the Kura date to the time of dinosaurs, sturgeons are unusual fish. Unlike River in Azerbaijan. However, dams on the Volga and Kura have other types of fish, sturgeons have scutes instead of scales. blocked sturgeons from being able to migrate upriver, and have changed the quality of the rivers so they are no longer able to support sturgeon reproduction. Reproduction: For sturgeon, the process of mixing female eggs and male sperm to create a fertilized egg that hatches into a baby sturgeon. -
By Species Items
1 Fish, crustaceans, molluscs, etc Capture production by species items Mediterranean and Black Sea C-37 Poissons, crustacés, mollusques, etc Captures par catégories d'espèces Méditerranée et mer Noire (a) Peces, crustáceos, moluscos, etc Capturas por categorías de especies Mediterráneo y Mar Negro English name Scientific name Species group Nom anglais Nom scientifique Groupe d'espèces 1998 1999 2000 2001 2002 2003 2004 Nombre inglés Nombre científico Grupo de especies t t t t t t t Freshwater bream Abramis brama 11 495 335 336 108 47 7 10 Common carp Cyprinus carpio 11 3 1 - 2 3 4 4 Roach Rutilus rutilus 11 1 1 2 7 11 12 5 Roaches nei Rutilus spp 11 13 78 73 114 72 83 47 Sichel Pelecus cultratus 11 105 228 276 185 147 52 39 Cyprinids nei Cyprinidae 11 - - 167 159 95 141 226 European perch Perca fluviatilis 13 - - - 1 1 - - Percarina Percarina demidoffi 13 - - - - 18 15 202 Pike-perch Stizostedion lucioperca 13 3 031 2 568 2 956 3 504 3 293 2 097 1 043 Freshwater fishes nei Osteichthyes 13 - - - 17 - 249 - Danube sturgeon(=Osetr) Acipenser gueldenstaedtii 21 114 36 20 8 10 3 3 Sterlet sturgeon Acipenser ruthenus 21 - - 0 - - - - Starry sturgeon Acipenser stellatus 21 13 11 5 3 5 1 1 Beluga Huso huso 21 12 10 1 0 4 1 3 Sturgeons nei Acipenseridae 21 290 185 59 22 23 14 8 European eel Anguilla anguilla 22 917 682 464 602 642 648 522 Salmonoids nei Salmonoidei 23 26 - - 0 - - 7 Pontic shad Alosa pontica 24 153 48 15 21 112 68 115 Shads nei Alosa spp 24 2 742 2 640 2 095 2 929 3 984 2 831 3 645 Azov sea sprat Clupeonella cultriventris 24 3 496 10 862 12 006 27 777 27 239 17 743 14 538 Three-spined stickleback Gasterosteus aculeatus 25 - - - 8 4 6 1 European plaice Pleuronectes platessa 31 - 0 6 7 7 5 5 European flounder Platichthys flesus 31 69 62 56 29 29 11 43 Common sole Solea solea 31 5 047 4 179 5 169 4 972 5 548 6 273 5 619 Wedge sole Dicologlossa cuneata 31 .. -
Chondrichthyan Fishes (Sharks, Skates, Rays) Announcements
Chondrichthyan Fishes (sharks, skates, rays) Announcements 1. Please review the syllabus for reading and lab information! 2. Please do the readings: for this week posted now. 3. Lab sections: 4. i) Dylan Wainwright, Thursday 2 - 4/5 pm ii) Kelsey Lucas, Friday 2 - 4/5 pm iii) Labs are in the Northwest Building basement (room B141) 4. Lab sections done: first lab this week on Thursday! 5. First lab reading: Agassiz fish story; lab will be a bit shorter 6. Office hours: we’ll set these later this week Please use the course web site: note the various modules Outline Lecture outline: -- Intro. to chondrichthyan phylogeny -- 6 key chondrichthyan defining traits (synapomorphies) -- 3 chondrichthyan behaviors -- Focus on several major groups and selected especially interesting ones 1) Holocephalans (chimaeras or ratfishes) 2) Elasmobranchii (sharks, skates, rays) 3) Batoids (skates, rays, and sawfish) 4) Sharks – several interesting groups Not remotely possible to discuss today all the interesting groups! Vertebrate tree – key ―fish‖ groups Today Chondrichthyan Fishes sharks Overview: 1. Mostly marine 2. ~ 1,200 species 518 species of sharks 650 species of rays 38 species of chimaeras Skates and rays 3. ~ 3 % of all ―fishes‖ 4. Internal skeleton made of cartilage 5. Three major groups 6. Tremendous diversity of behavior and structure and function Chimaeras Chondrichthyan Fishes: 6 key traits Synapomorphy 1: dentition; tooth replacement pattern • Teeth are not fused to jaws • New rows move up to replace old/lost teeth • Chondrichthyan teeth are -
Active Faulting Geometry and Stress
Tectonics RESEARCH ARTICLE Active Faulting Geometry and Stress Pattern Near Complex 10.1029/2018TC004983 Strike-Slip Systems Along the Maghreb Region: Special Section: Constraints on Active Convergence Geodynamics, Crustal and Lithospheric Tectonics, and in the Western Mediterranean active deformation in the Mediterranean Regions Abdelkader Soumaya1,2 , Noureddine Ben Ayed3, Mojtaba Rajabi4 , Mustapha Meghraoui5, (A tribute to Prof. Renato Damien Delvaux6, Ali Kadri3, Moritz Ziegler7,8 , Said Maouche9, and Ahmed Braham2 Funiciello) 1Faculty of Sciences Tunis, University of Manar, Tunis, Tunisia, 2National Office of Mines, Tunisia, 3Faculty of Sciences Bizerte, 4 Key Points: University of Carthage, Tunis, Tunisia, Australian School of Petroleum, University of Adelaide, Adelaide, South Australia, • Maghreb region is characterized by Australia, 5Institut de Physique du Globe de Strasbourg (UMR 7516), Strasbourg, France, 6Earth Sciences Department, Royal different geometries of active Museum for Central Africa, Tervuren, Belgium, 7Helmholtz Centre Potsdam, German Research Centre for Geosciences GFZ, strike-slip faults Potsdam, Germany, 8Institute of Earth and Environmental Science, University of Potsdam, Potsdam, Germany, 9CRAAG, • Present-day active contraction on western Africa-Eurasia boundary is Bouzareah-Alger, Algeria accommodated by a combination of strike-slip and thrust faulting • Second-order tectonic regime across Abstract The Maghreb region (from Tunisia to Gibraltar) is a key area in the western Mediterranean to Maghreb varies with clockwise study the active tectonics and stress pattern across the Africa-Eurasia convergent plate boundary. In the rotation of S from east to west Hmax present study, we compile comprehensive data set of well-constrained crustal stress indicators (from single focal mechanism solutions, formal inversion of focal mechanism solutions, and young geologic fault slip data) based on our and published data analyses. -
ESS 345 Ichthyology
ESS 345 Ichthyology Evolutionary history of fishes 12 Feb 2019 (Who’s birthday?) Quote of the Day: We must, however, acknowledge, as it seems to me, that man with all his noble qualities... still bears in his bodily frame the indelible stamp of his lowly origin._______, (1809-1882) Evolution/radiation of fishes over time Era Cenozoic Fig 13.1 Fishes are the most primitive vertebrate and last common ancestor to all vertebrates They start the branch from all other living things with vertebrae and a cranium Chordata Notochord Dorsal hollow nerve cord Pharyngeal gill slits Postanal tail Urochordata Cephalochordata Craniates (mostly Vertebrata) Phylum Chordata sister is… Echinodermata Synapomorphy – They are deuterostomes Fish Evolutionary Tree – evolutionary innovations in vertebrate history Sarcopterygii Chondrichthyes Actinopterygii (fish) For extant fishes Osteichthyes Gnathostomata Handout Vertebrata Craniata Figure only from Berkeley.edu Hypothesis of fish (vert) origins Background 570 MYA – first large radiation of multicellular life – Fossils of the Burgess Shale – Called the Cambrian explosion Garstang Hypothesis 1928 Neoteny of sessile invertebrates Mistake that was “good” Mudpuppy First Vertebrates Vertebrates appear shortly after Cambrian explosion, 530 MYA – Conodonts Notochord replaced by segmented or partially segmented vertebrate and brain is enclosed in cranium Phylogenetic tree Echinoderms, et al. Other “inverts” Vertebrate phyla X Protostomes Deuterostomes Nephrozoa – bilateral animals First fishes were jawless appearing -
THE CASE AGAINST Marine Mammals in Captivity Authors: Naomi A
s l a m m a y t T i M S N v I i A e G t A n i p E S r a A C a C E H n T M i THE CASE AGAINST Marine Mammals in Captivity The Humane Society of the United State s/ World Society for the Protection of Animals 2009 1 1 1 2 0 A M , n o t s o g B r o . 1 a 0 s 2 u - e a t i p s u S w , t e e r t S h t u o S 9 8 THE CASE AGAINST Marine Mammals in Captivity Authors: Naomi A. Rose, E.C.M. Parsons, and Richard Farinato, 4th edition Editors: Naomi A. Rose and Debra Firmani, 4th edition ©2009 The Humane Society of the United States and the World Society for the Protection of Animals. All rights reserved. ©2008 The HSUS. All rights reserved. Printed on recycled paper, acid free and elemental chlorine free, with soy-based ink. Cover: ©iStockphoto.com/Ying Ying Wong Overview n the debate over marine mammals in captivity, the of the natural environment. The truth is that marine mammals have evolved physically and behaviorally to survive these rigors. public display industry maintains that marine mammal For example, nearly every kind of marine mammal, from sea lion Iexhibits serve a valuable conservation function, people to dolphin, travels large distances daily in a search for food. In learn important information from seeing live animals, and captivity, natural feeding and foraging patterns are completely lost. -
Africa-Arabia-Eurasia Plate Interactions and Implications for the Dynamics of Mediterranean Subduction and Red Sea Rifting
This page added by the GeoPRISMS office. Africa-Arabia-Eurasia plate interactions and implications for the dynamics of Mediterranean subduction and Red Sea rifting Authors: R. Reilinger, B. Hager, L. Royden, C. Burchfiel, R. Van der Hilst Department of Earth, Atmospheric, and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA USA, [email protected], Tel: (617)253 -7860 This page added by the GeoPRISMS office. Our proposed GeoPRISMS Initiative is based on the premise that understanding the mechanics of plate motions (i.e., the force balance on the plates) is necessary to develop realistic models for plate interactions, including processes at subduction and extensional (rifting) plate boundaries. Important advances are being made with new geologic and geophysical techniques and observations that are providing fundamental insights into the dynamics of these plate tectonic processes. Our proposed research addresses directly the following questions identified in the GeoPRISMS SCD Draft Science Plan: 4.2 (How does deformation across the subduction plate boundary evolve in space and time, through the seismic cycle and beyond?), 4.6 (What are the physical and chemical conditions that control subduction zone initiation and the development of mature arc systems?), and 4.7 (What are the critical feedbacks between surface processes and subduction zone mechanics and dynamics?). It has long been recognized that the Greater Mediterranean region provides a natural laboratory to study a wide range of geodynamic processes (Figure 1) including ocean subduction and continent- continent collision (Hellenic arc, Arabia-Eurasia collision), lithospheric delamination (E Turkey High Plateau, Alboran Sea/High Atlas), back-arc extension (Mediterranean basins, including Alboran, Central Mediterranean, Aegean), “escape” tectonics and associated continental transform faulting (Anatolia, North and East Anatolian faults), and active continental and ocean rifting (East African and northern Red Sea rifting, central Red Sea and Gulf of Aden young ocean rifting).