Seaweed Biodiversity of India: Reviewing Current Knowledge to Identify Gaps, Challenges, and Opportunities
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Revision of Herbarium Specimens of Freshwater Enteromorpha-Like Ulva (Ulvaceae, Chlorophyta) Collected from Central Europe During the Years 1849–1959
Phytotaxa 218 (1): 001–029 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ PHYTOTAXA Copyright © 2015 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.218.1.1 Revision of herbarium specimens of freshwater Enteromorpha-like Ulva (Ulvaceae, Chlorophyta) collected from Central Europe during the years 849–959 ANDRZEJ S. RYBAK Department of Hydrobiology, Institute of Environmental Biology, Faculty of Biology, Adam Mickiewicz University, Umultowska 89, PL61 – 614 Poznań, Poland. [email protected] Abstract This paper presents results concerning the taxonomic revision of Ulva taxa originating from herbarium specimens dating back to 1849–1959. A staining and softening mixture was applied to allow a detailed morphometric analysis of thalli and cells and to detect many morphological details. The study focused on individuals collected exclusively from inland water ecosystems (having no contact with sea water). Detailed analysis concerned the following items: structures of thalli and cells, number of pyrenoids per cell, configuration of cells inside the thallus, occurrence or not of branching thallus, shapes of apical cells, and shape of chromatophores. The objective of the study was to confirm the initial identifications of specimens of Ulva held in herbaria. The study sought to determine whether saltwater species of the genus Ulva, e.g., Ulva compressa and U. intestinalis, could have been found in European freshwater ecosystems in 19th and 20th centuries. Moreover, the paper presents a method for the initial treatment of voucher specimens for viewing stained cellular structures that are extremely vulnerable to damage (the oldest specimens were more than 160 years old). -
Asexual Life History by Biflagellate Zoids In
Aquatic Botany 91 (2009) 213–218 Contents lists available at ScienceDirect Aquatic Botany journal homepage: www.elsevier.com/locate/aquabot Asexual life history by biflagellate zoids in Monostroma latissimum (Ulotrichales) Felix Bast a,*, Satoshi Shimada b, Masanori Hiraoka a, Kazuo Okuda a a Graduate School of Kuroshio Science, Kochi University, 2-5-1 Akebono, Kochi 780-8520, Japan b Graduate School of Humanities and Sciences, Ochanomizu University, Tokyo 112-8610, Japan ARTICLE INFO ABSTRACT Article history: Monostroma latissimum (Kuetzing) Wittrock is a monostromatic green alga of commercial importance in Received 16 December 2008 Japan. Here we report the serendipitous discovery of asexually reproducing specimens collected from Received in revised form 26 May 2009 Usa, on the Pacific coast of Kochi Prefecture, south-western Japan. Zoids were found to be biflagellate and Accepted 24 June 2009 negatively phototactic. Germination of settled zoids was observed to follow erect-filamentous ontogeny Available online 1 July 2009 similar to that of the previously reported sexual strain. Moreover, the newly discovered asexual strain had identical sequences of nuclear encoded ITS (Internal Transcribed Spacer) region to that of the sexual Keywords: strain. On the basis of this finding, we postulate that the ITS sequences may have been maintained in Internal Transcribed Spacer these conspecific strains despite the evolution in sexuality. Relationships were investigated among M. Life history Phylogeny latissimum and other monostromatic taxa within the -
Exhaustive Reanalysis of Barcode Sequences from Public
Exhaustive reanalysis of barcode sequences from public repositories highlights ongoing misidentifications and impacts taxa diversity and distribution: a case study of the Sea Lettuce. Antoine Fort1, Marcus McHale1, Kevin Cascella2, Philippe Potin2, Marie-Mathilde Perrineau3, Philip Kerrison3, Elisabete da Costa4, Ricardo Calado4, Maria Domingues5, Isabel Costa Azevedo6, Isabel Sousa-Pinto6, Claire Gachon3, Adrie van der Werf7, Willem de Visser7, Johanna Beniers7, Henrice Jansen7, Michael Guiry1, and Ronan Sulpice1 1NUI Galway 2Station Biologique de Roscoff 3Scottish Association for Marine Science 4University of Aveiro 5Universidade de Aveiro 6University of Porto Interdisciplinary Centre of Marine and Environmental Research 7Wageningen University & Research November 24, 2020 Abstract Sea Lettuce (Ulva spp.; Ulvophyceae, Ulvales, Ulvaceae) is an important ecological and economical entity, with a worldwide distribution and is a well-known source of near-shore blooms blighting many coastlines. Species of Ulva are frequently misiden- tified in public repositories, including herbaria and gene banks, making species identification based on traditional barcoding hazardous. We investigated the species distribution of 295 individual distromatic foliose strains from the North East Atlantic by traditional barcoding or next generation sequencing. We found seven distinct species, and compared our results with all worldwide Ulva spp sequences present in the NCBI database for the three barcodes rbcL, tuf A and the ITS1. Our results demonstrate a large degree of species misidentification in the NCBI database. We estimate that 21% of the entries pertaining to foliose species are misannotated. In the extreme case of U. lactuca, 65% of the entries are erroneously labelled specimens of another Ulva species, typically U. fenestrata. In addition, 30% of U. -
Differentiation Between Some Ulva Spp. by Morphological, Genetic and Biochemical Analyses
Филогенетика Вавиловский журнал генетики и селекции. 2017;21(3):360367 ОРИГИНАЛЬНОЕ ИССЛЕДОВАНИЕ / ORIGINAL ARTICLE DOI 10.18699/VJ17.253 Differentiation between some Ulva spp. by morphological, genetic and biochemical analyses M.M. Ismail1 , S.E. Mohamed2 1 Marine Environmental Division, National Institute of Oceanography and Fisheries, Alexandria, Egypt 2 Department of Molecular Biology, Genetic Engineering and Biotechnology Research Institute, Sadat City University, Sadat City, Egypt Ulva is most common green seaweed in Egypt coast, it used as a Различия между некоторыми source of food, feed, medicines and fertilizers in all the world. This study is the first time to investigate the morphological, genetic видами рода Ulva, выявленные and biochemical variation within four Ulva species collected путем морфологического, from Eastern Harbor, Alexandria. The morphology description of генетического и биохимического thallus showed highly variations according to species, but there is not enough data to make differentiation between species in the анализа same genus since it is impacted with environmental factors and development stage of seaweeds. Genetic variations between the М.М. Исмаил1 , С.Э. Мохамед2 tested Ulva spp. were analyzed using random amplified polymor phic DNA (RAPD) analyses which shows that it would be possible 1 Отдел исследований морской среды Национального института to establish a unique fingerprint for individual seaweeds based on океанографии и рыболовства, Александрия, Египет 2 Отдел молекулярной биологии Исследовательского института the combined results generated from a small collection of prim генной инженерии и биотехнологий, Садатский университет, ers. The dendrogram showed that the most closely species are Садат, Египет U. lactuca and U. compressa, while, U. fasciata was far from both U. -
Using a Macroalgal Functional Form Approach to Assess the Level of Disturbance of Seagrass Meadows in Bahía of Nuevitas, Cuba (2000-2002)
American Journal of Plant Sciences, 2019, 10, 2020-2033 https://www.scirp.org/journal/ajps ISSN Online: 2158-2750 ISSN Print: 2158-2742 Using a Macroalgal Functional Form Approach to Assess the Level of Disturbance of Seagrass Meadows in Bahía of Nuevitas, Cuba (2000-2002) Rubén Cabrera1*, Jhoana Díaz-Larrea2, Schery Umanzor3, Laura Georgina Núñez García2 1Gabinete de Arqueologia,́ Oficina del Historiador de la Ciudad, Habana Vieja, Cuba 2Departamento de Hidrobiología, Universidad Autónoma Metropolitana-Iztapalapa, Mexico City, Mexico 3Department of Ecology & Evolutionary Biology, University of Connecticut, Stamford, CT, USA How to cite this paper: Cabrera, R., Abstract Díaz-Larrea, J., Umanzor, S. and García, L.G.N. (2019) Using a Macroalgal Func- A study on the spatial and seasonal variations of the associate macroalgae and tional Form Approach to Assess the Level epiphytes of Thalassia testudinum was carried out in Bahía de Nuevitas. Six- of Disturbance of Seagrass Meadows in ty-two species were identified: 3 Cyanophyta, 25 Chlorophyta, 8 Phaeophy- Bahía of Nuevitas, Cuba (2000-2002). American Journal of Plant Sciences, 10, ceae, 23 Rhodophyta and 3 Magnoliophyta, with two new records for Cuba 2020-2033. and 43 for the area. The differences in the specific composition of the ma- https://doi.org/10.4236/ajps.2019.1011142 croalgae communities are determined by a space component related to the Received: October 10, 2019 type of affectation in each area. The morpho-functional groups of macroalgae Accepted: November 18, 2019 in the station with more nutrient influence were mainly foliaceous and fila- Published: November 21, 2019 mentous. In the stations far from the city, the predominant morpho-types were the leathery and articulate calcareous indicators of lower nitrification Copyright © 2019 by author(s) and Scientific Research Publishing Inc. -
Successions of Phytobenthos Species in a Mediterranean Transitional Water System: the Importance of Long Term Observations
A peer-reviewed open-access journal Nature ConservationSuccessions 34: 217–246 of phytobenthos (2019) species in a Mediterranean transitional water system... 217 doi: 10.3897/natureconservation.34.30055 RESEARCH ARTICLE http://natureconservation.pensoft.net Launched to accelerate biodiversity conservation Successions of phytobenthos species in a Mediterranean transitional water system: the importance of long term observations Antonella Petrocelli1, Ester Cecere1, Fernando Rubino1 1 Water Research Institute (IRSA) – CNR, via Roma 3, 74123 Taranto, Italy Corresponding author: Antonella Petrocelli ([email protected]) Academic editor: A. Lugliè | Received 25 September 2018 | Accepted 28 February 2019 | Published 3 May 2019 http://zoobank.org/5D4206FB-8C06-49C8-9549-F08497EAA296 Citation: Petrocelli A, Cecere E, Rubino F (2019) Successions of phytobenthos species in a Mediterranean transitional water system: the importance of long term observations. In: Mazzocchi MG, Capotondi L, Freppaz M, Lugliè A, Campanaro A (Eds) Italian Long-Term Ecological Research for understanding ecosystem diversity and functioning. Case studies from aquatic, terrestrial and transitional domains. Nature Conservation 34: 217–246. https://doi.org/10.3897/ natureconservation.34.30055 Abstract The availability of quantitative long term datasets on the phytobenthic assemblages of the Mar Piccolo of Taranto (southern Italy, Mediterranean Sea), a lagoon like semi-enclosed coastal basin included in the Italian LTER network, enabled careful analysis of changes occurring in the structure of the community over about thirty years. The total number of taxa differed over the years. Thirteen non-indigenous species in total were found, their number varied over the years, reaching its highest value in 2017. The dominant taxa differed over the years. -
New Records of Benthic Brown Algae (Ochrophyta) from Hainan Island (1990 - 2016)
Titlyanova TV et al. Ochrophyta from Hainan Data Paper New records of benthic brown algae (Ochrophyta) from Hainan Island (1990 - 2016) Tamara V. Titlyanova1, Eduard A. Titlyanov1, Li Xiubao2, Bangmei Xia3, Inka Bartsch4 1National Scientific Centre of Marine Biology, Far Eastern Branch of the Russian Academy of Sciences, Palchevskogo 17, Vladivostok, 690041, Russia; 2Key Laboratory of Tropical Marine Bio-Resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou 510301, China; 3Institute of Oceanology, Chinese Academy of Sciences, 7 Nanhai Road, 266071 Qingdao, PR China; 4Alfred-Wegener-Institute for Polar and Marine Research, Am Handelshafen 12, 27570 Bremerhaven, Germany Corresponding author: E Titlyanov, e-mail: [email protected] Abstract This study reports on the intertidal and shallow subtidal brown algal flora from Hainan Island in the South China Sea, based on extensive sample collection conducted in 1990, 1992 and 2008−2016. The analysis revealed 27 new records of brown algae for Hainan Island, including 5 species which also constitute new records for China. 21 of these species are de- scribed with photographs and an annotated list of all species with information on life forms, habitat (localities and tidal zones) and their geographical distribution is provided. Keywords: Hainan Island, new records, seaweeds, brown algae Introduction et al. 1994; Hodgson & Yau 1997; Tadashi et al. 2008). Overall, algal species richness also changed. Hainan Island is located on the subtropical northern Partial inventory of the benthic flora of Hainan has periphery of the Pacific Ocean in the South China Sea already been carried out (Titlyanov et al. 2011a, 2015, 2016; (18˚10′-20˚9′ N, 108˚37′-111˚1′ E). -
New Records of Benthic Marine Algae and Cyanobacteria for Costa Rica, and a Comparison with Other Central American Countries
Helgol Mar Res (2009) 63:219–229 DOI 10.1007/s10152-009-0151-1 ORIGINAL ARTICLE New records of benthic marine algae and Cyanobacteria for Costa Rica, and a comparison with other Central American countries Andrea Bernecker Æ Ingo S. Wehrtmann Received: 27 August 2008 / Revised: 19 February 2009 / Accepted: 20 February 2009 / Published online: 11 March 2009 Ó Springer-Verlag and AWI 2009 Abstract We present the results of an intensive sampling Rica; we discuss this result in relation to the emergence of program carried out from 2000 to 2007 along both coasts of the Central American Isthmus. Costa Rica, Central America. The presence of 44 species of benthic marine algae is reported for the first time for Costa Keywords Marine macroalgae Á Cyanobacteria Á Rica. Most of the new records are Rhodophyta (27 spp.), Costa Rica Á Central America followed by Chlorophyta (15 spp.), and Heterokontophyta, Phaeophycea (2 spp.). Overall, the currently known marine flora of Costa Rica is comprised of 446 benthic marine Introduction algae and 24 Cyanobacteria. This species number is an under estimation, and will increase when species of benthic The marine benthic flora plays an important role in the marine algae from taxonomic groups where only limited marine environment. It forms the basis of many marine information is available (e.g., microfilamentous benthic food chains and harbors an impressive variety of organ- marine algae, Cyanobacteria) are included. The Caribbean isms. Fish, decapods and mollusks are among the most coast harbors considerably more benthic marine algae (318 prominent species associated with the marine flora, which spp.) than the Pacific coast (190 spp.); such a trend has serves these animals as a refuge and for alimentation (Hay been observed in all neighboring countries. -
Checklist and Bibliography of the Marine Benthic Algae Within Chuuk, Pohnpei, and Kosrae States, Federated States of Micronesia
Checklist and Bibliography of the Marine Benthic Algae Within Chuuk, Pohnpei, and Kosrae States, Federated States of Micronesia Roy T. Tsuda Pacific Biological Survey Bishop Museum January 2006 Checklist and Bibliography of the Marine Benthic Algae Within Chuuk, Pohnpei, and Kosrae States, Federated States of Micronesia Prepared for: Marine Introduced Species Workshop in Chuuk, Pohnpei, and Kosrae States, Federated States of Micronesia Roy T. Tsuda Department of Natural Sciences Bishop Museum Bishop Museum Pacific Biological Survey Bishop Museum Technical Report No. 34 Honolulu, Hawai‘i January 2006 2 Published by Bishop Museum Press 1525 Bernice Street Honolulu, Hawai‘i Copyright © 2006 Bishop Museum All Rights Reserved Printed in the United States of America LOGO ISSN 1085-455X Contribution No. 2006-001 to the Pacific Biological Survey 3 TABLE OF CONTENTS Page INTRODUCTION 6 SPECIES AND REFERENCES 8 Division Cyanophyta 8 Class Cyanophyceae 8 Order Chroococcales 8 Family Entophysalidaceae Family Microcystaceae Order Oscillatoriales 8 Family Oscillatoriaceae Family Phormidiaceae Family Pseudanabaenaceae Family Schizothrichaceae Order Nostocales 10 Family Nostocaceae Family Rivulariaceae Family Scytonemataceae Order Stigonematales 10 Family Nostochopsidaceae Division Chlorophyta 11 Class Chlorophyceae 11 Order Ulotrichales 11 Family Ulotrichaceae Order Ctenocladales 11 Family Ulvellaceae Order Ulvales 11 Family Ulvaceae Order Cladophorales 11 Family Anadyomenaceae Family Cladophoraceae Family Siphonocladaceae Family Valoniaceae 4 Page Order -
Lateral Gene Transfer of Anion-Conducting Channelrhodopsins Between Green Algae and Giant Viruses
bioRxiv preprint doi: https://doi.org/10.1101/2020.04.15.042127; this version posted April 23, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 5 Lateral gene transfer of anion-conducting channelrhodopsins between green algae and giant viruses Andrey Rozenberg 1,5, Johannes Oppermann 2,5, Jonas Wietek 2,3, Rodrigo Gaston Fernandez Lahore 2, Ruth-Anne Sandaa 4, Gunnar Bratbak 4, Peter Hegemann 2,6, and Oded 10 Béjà 1,6 1Faculty of Biology, Technion - Israel Institute of Technology, Haifa 32000, Israel. 2Institute for Biology, Experimental Biophysics, Humboldt-Universität zu Berlin, Invalidenstraße 42, Berlin 10115, Germany. 3Present address: Department of Neurobiology, Weizmann 15 Institute of Science, Rehovot 7610001, Israel. 4Department of Biological Sciences, University of Bergen, N-5020 Bergen, Norway. 5These authors contributed equally: Andrey Rozenberg, Johannes Oppermann. 6These authors jointly supervised this work: Peter Hegemann, Oded Béjà. e-mail: [email protected] ; [email protected] 20 ABSTRACT Channelrhodopsins (ChRs) are algal light-gated ion channels widely used as optogenetic tools for manipulating neuronal activity 1,2. Four ChR families are currently known. Green algal 3–5 and cryptophyte 6 cation-conducting ChRs (CCRs), cryptophyte anion-conducting ChRs (ACRs) 7, and the MerMAID ChRs 8. Here we 25 report the discovery of a new family of phylogenetically distinct ChRs encoded by marine giant viruses and acquired from their unicellular green algal prasinophyte hosts. -
2004 University of Connecticut Storrs, CT
Welcome Note and Information from the Co-Conveners We hope you will enjoy the NEAS 2004 meeting at the scenic Avery Point Campus of the University of Connecticut in Groton, CT. The last time that we assembled at The University of Connecticut was during the formative years of NEAS (12th Northeast Algal Symposium in 1973). Both NEAS and The University have come along way. These meetings will offer oral and poster presentations by students and faculty on a wide variety of phycological topics, as well as student poster and paper awards. We extend a warm welcome to all of our student members. The Executive Committee of NEAS has extended dormitory lodging at Project Oceanology gratis to all student members of the Society. We believe this shows NEAS members’ pride in and our commitment to our student members. This year we will be honoring Professor Arthur C. Mathieson as the Honorary Chair of the 43rd Northeast Algal Symposium. Art arrived with his wife, Myla, at the University of New Hampshire in 1965 from California. Art is a Professor of Botany and a Faculty in Residence at the Jackson Estuarine Laboratory of the University of New Hampshire. He received his Bachelor of Science and Master’s Degrees at the University of California, Los Angeles. In 1965 he received his doctoral degree from the University of British Columbia, Vancouver, Canada. Over a 43-year career Art has supervised many undergraduate and graduate students studying the ecology, systematics and mariculture of benthic marine algae. He has been an aquanaut-scientist for the Tektite II and also for the FLARE submersible programs. -
Ulvella Tongshanensis (Ulvellaceae, Chlorophyta), a New Freshwater Species from China, and an Emended Morphological Circumscription of the Genus Ulvella
Fottea, Olomouc, 15(1): 95–104, 2015 95 Ulvella tongshanensis (Ulvellaceae, Chlorophyta), a new freshwater species from China, and an emended morphological circumscription of the genus Ulvella Huan ZHU1, 2, Frederik LELIAERT3, Zhi–Juan ZHAO1, 2, Shuang XIA4, Zheng–Yu HU5, Guo–Xiang LIU1* 1 Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, P. R. China; *Corresponding author e–mail: [email protected] 2University of Chinese Academy of Sciences, Beijing 100049, P. R. China 3Marine Biology Research Group, Department of Biology, Ghent University, Krijgslaan 281–S8, 9000 Ghent, Belgium 4College of Life Sciences, South–central University for Nationalities, Wuhan, 430074, P. R. China 5State key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, P. R. China Abstract: A new freshwater species of Ulvella, U. tongshanensis H. ZHU et G. LIU, is described from material collected from rocks under small waterfalls in Hubei Province, China. This unusual species differs from other species in the genus by the macroscopic and upright parenchymatous thalli, and by the particular habitat (most Ulvella species occur in marine environments). Phylogenetic analyses of plastid encoded rbcL and tufA, and nuclear 18S rDNA sequences, pointed towards the generic placement of U. tongshanensis and also showed a close relationship with two other freshwater species, Ulvella bullata (Jao) H. ZHU et G. LIU, comb. nov. and Ulvella prasina (Jao) H. ZHU et G. LIU, comb. nov. The latter two were previously placed in the genus Jaoa and are characterized by disc–shaped to vesicular morphology. Our study once again shows that traditionally used morphological characters are poor indicators for phylogenetic relatedness in morphologically simple algae like the Ulvellaceae.