Beam Profile Assessment in Spectral CT Scanners

Total Page:16

File Type:pdf, Size:1020Kb

Load more

Received: 23 July 2017 | Revised: 23 November 2017 | Accepted: 7 December 2017 DOI: 10.1002/acm2.12260 MEDICAL IMAGING Beam profile assessment in spectral CT scanners Marzieh Anjomrouz1,2 | Muhammad Shamshad1,2 | Raj K. Panta1,2 | Lieza Vanden Broeke3 | Nanette Schleich4 | Ali Atharifard1,2 | Raja Aamir1,2 | Srinidhi Bheesette1,5 | Michael F. Walsh2 | Brian P. Goulter2 | Stephen T. Bell2,5 | Christopher J. Bateman1,2,3 | Anthony P. H. Butler1,2,3,5 | Philip H. Butler2,3,5 1Department of Radiology, University of Otago, Christchurch, New Zealand Abstract 2MARS Bioimaging Ltd, Christchurch, New In this paper, we present a method that uses a combination of experimental and Zealand modeled data to assess properties of x-ray beam measured using a small-animal 3Department of Physics and Astronomy, fi University of Canterbury, Christchurch, spectral scanner. The spatial properties of the beam pro le are characterized by New Zealand beam profile shape, the angular offset along the rotational axis, and the photon 4 Department of Radiation Therapy, count difference between experimental and modeled data at the central beam axis. University of Otago, Wellington, New Zealand Temporal stability of the beam profile is assessed by measuring intra- and interscan 5European Organization for Nuclear count variations. The beam profile assessment method was evaluated on several Research (CERN), Geneva, Switzerland spectral CT scanners equipped with Medipix3RX-based detectors. On a well-cali- Author to whom correspondence should be brated spectral CT scanner, we measured an integral count error of 0.5%, intrascan addressed. Marzieh Anjomrouz E-mail: [email protected] count variation of 0.1%, and an interscan count variation of less than 1%. The angu- lar offset of the beam center ranged from 0.8° to 1.6° for the studied spectral CT Funding Information scanners. We also demonstrate the capability of this method to identify poor per- University of Otago; University of Canterbury; MARS Bioimaging Ltd.; CERN; formance of the system through analyzing the deviation of the experimental beam National Heart Foundation; Maurice and profile from the model. This technique can, therefore, aid in monitoring the system Phyllis Paykel Trust performance to obtain a robust spectral CT; providing the reliable quantitative images. Furthermore, the accurate offset parameters of a spectral scanner provided by this method allow us to incorporate a more realistic form of the photon distribu- tion in the polychromatic-based image reconstruction models. Both improvements of the reliability of the system and accuracy of the volume reconstruction result in a better discrimination and quantification of the imaged materials. PACS 87.57.-s, 87.57.cf, 87.57.cm, 87.57.cp, 87.57.N-, 87.57.Q-, 87.59.-e KEY WORDS beam profile, geometric calibration, Medipix detector, spectral CT, x-ray source model 1 | INTRODUCTION power, and propagation. The characterization of a beam is specific to the type of beam, which could be monochromatic 1–3 or polychro- A broad definition of the beam profile analysis encompasses all beam matic.4 For a laser beam, parameters such as alignment, focus spot properties, such as spatial, temporal and spectral characteristics, size, and beam uniformity are typically analyzed to optimize laser ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. © 2018 MARS Bioimaging Ltd. Journal of Applied Clinical Medical Physics published by Wiley Periodicals, Inc. on behalf of American Association of Physicists in Medicine. | J Appl Clin Med Phys 2018; 19:2:287–297 wileyonlinelibrary.com/journal/jacmp 287 288 | ANJOMROUZ ET AL. performance.1,2 Characterizing the beamlines is also essential in par- Reconstruction problems can also arise when random fluctuations ticle accelerators for them to be operated with optimal output.3 The occur in the beam profile due to instability of CT scanner components, polychromaticity of the x-ray beams used in the computed tomogra- such as the x-ray tube and detector. Fluctuations in the beam profile phy (CT) scanners necessitates the accurate modeling of beam pro- are more likely when spectral data are acquired over a long exposure file in these machines. CT scanners are used for diagnostic imaging time. Relatively long exposure time is required because photon count- (kilovoltage range) and image-guided radiotherapy (megavoltage ing detectors can optimally operate at low photon flux.14 The use of range). Many methods have been published for beam profile mea- low photon flux ensures maintaining spatial and spectral fidelity of the surements of such systems. Among them, the work published by images in two aspects.5,15 Firstly, the small pixel size of the photon Malts et al. can be referred to. They presented a method of charac- counting detectors such as Medipix3RX favors the use of x-ray tubes terizing the spatial variation in the intensity and energy of the inci- with small focal spot sizes (e.g., 50 lm) to maximize spatial resolu- dent beam in diagnostic and treatment cone beam CT.4 tion.5,14,16 Striking the smaller area of the anode target by electrons, in Beam profile characterization is also a prerequisite to optimize turn, generates a lower photon flux.14,17 Secondly, due to limited performance of spectral CT scanners operating on the basis of pho- pulse resolution time of such detectors, the energy information of a ton-counting detectors. The optimal performance of the spectral CT high flux beam cannot be resolved correctly. The energy of coincident scanner is achievable when the energy and position of the incident photons is accumulated and registered at a higher energy of each ini- photon are measured accurately.5 Beam profile assessment methods tial photon. This pulse pile-up effect results in the loss of spectral examining various properties of the beam profile can be used to iden- information.16,18 To minimize the occurrence of this effect, incident tify the parameters that prevent accurate measurement of photon photon flux needs to be reduced. energy and position. The properties of the beam such as photon inten- Acquiring data with longer exposure time, while using the low sity and its angular distribution not only needs to be characterized at photon flux, provides sufficient counts; resulting in a higher signal to initial installation, but beam profiles also need to be regularly assessed noise ratio in reconstructed images. However, the detector perfor- for identifying the distortion caused by either deterioration of the mance may degrade due to increasing ASIC temperature and as a x-ray tube performance during its lifetime or instabilities of other scan- consequence, charge loss occurs due to detector polarization during ner components. In this study, aforementioned properties are charac- long acquisition time. Therefore, the beam profile stability needs to terized for the beam profiles measured using MARS small-animal be monitored in such a system to ensure that there is no count drift spectral CT manufactured by MARS Bioimaging Ltd., New Zealand. during imaging. In response to this need, we have developed a beam The MARS spectral CT scanners use Medipix photon counting profile assessment and characterization method. The method enables detectors to provide 3D tomographic images with both high spatial quantification of the temporal and spatial properties of beam profiles and high spectral resolution. The energy resolved information enables and assessment through comparison with modeled beam profiles. simultaneous discrimination and quantification of different materials In this paper, we introduce a parametrized semi-analytic source based on their spectral signatures.6,7 The spectral imaging allows the model and the experimental requirements. We then explain the pro- extraction of functional and anatomical features of the tissues via trac- cedure of developing the beam profile assessment method, and pre- ing biomarkers and pharmaceuticals in a low dose and noninvasive sent method evaluation results obtained from one well-calibrated way.8,9 MARS imaging has been used in various preclinical applications and two poorly calibrated MARS spectral CTs. such as characterizing the composition of excised vulnerable atherosclerosis plaques in arteries,10 functional imaging of arthritic cartilage,11 and targeting cancerous cells using nanoparticles.12 2 | MATERIALS AND METHODS The x-ray tube used in the spectral CT provides a cone shape photon distribution which typically varies over the imaging field.4 A workflow diagram of the beam profile assessment method is Furthermore, x-ray tube manufacturing and alignment variation of depicted in Fig. 1. An experimental beam profile is provided to the the beam direction with detector plane in a spectral CT scanner also method. Then a modeled beam profile is prepared from a semi-analytic makes the photon beam profile specific to that system. For instance, source model based on the equivalent spatial parameters of the mea- relative geometric offsets due to tube anode orientation may spa- surement. Measured and modeled data are then preprocessed to reach tially shift the recorded beam profile. To identify such a variation, the same level of conformity to be comparable with each other. In the the beam profile of each spectral
Recommended publications
  • X-Ray Detectors for Medical, Industrial and Security Applications 2019

    X-Ray Detectors for Medical, Industrial and Security Applications 2019

    From Technologies to Markets X-Ray Detectors for Medical, Industrial and Security Applications 2019 Sample © 2019 ABOUT THE AUTHORS Biographies & contacts Marjorie Villien, PhD As a Technology & Market Analyst, Marjorie Villien, PhD is member of the Medical Technologies business unit at Yole Développement (Yole). She is a daily contributor to the development of these activities with a dedicated collection of market & technology reports as well as custom consulting projects. After spending two years at Harvard and prior Yole, Marjorie served as a research scientist at INSERM. Marjorie Villien graduated from Grenoble INP and holds a PhD in physics & medical imaging. Email: [email protected] Jérôme Mouly Jerôme Mouly serves as a Senior Technology & Market Analyst & Business Developer specialized in microtechnologies for inkjet & bioMEMS sensors. Since 2000, he has participated in more than 100 marketing and technological analyses for industrial groups, start-ups and institutes. Previously, Jerome was involved in a support action for value creation of smart miniaturized systems research projects at Yole Finance Innovation, part of Yole Développement. Jérôme holds a Master of Physics from the University of Lyon (France). Email: [email protected] ©2019 | X-Ray Detectors for Medical, Industrial and Security Applications | www.yole.fr | SAMPLE 2 TABLE OF CONTENTS X-ray detectors for medical, industrial and security applications Executive Summary 13 o Major players and market shares at the system level Context 51 Supply chain, market shares and value
  • Knowledge Transfer @ CERN

    Knowledge Transfer @ CERN

    Knowledge Transfer @ CERN Giovanni Anelli Head of Knowledge Transfer Group KT group structure Technology Transfer and IP Management Section Leader: Enrico Chesta Knowledge Transfer Group Life Sciences Section Leader: Manjit Dosanjh G. Anelli – Italy@CERN - 10.10.2011 The KT group mandate The Knowledge Transfer Group has the objective of promoting, supporting and maximising knowledge and technology transfer from CERN to society In particular, our relationship with Industry is very important! We want to move towards a “Market pull” approach (as opposed to “Technology push”) G. Anelli – Italy@CERN - 10.10.2011 CERN Technologies CERN innovates in three areas Detecting Accelerating particles particle beams Large-scale computing (Grid) G. Anelli – Italy@CERN - 10.10.2011 Accelerator TechnologiesBase Technologies: LHC Superconductivity (12kA) Cryogenics (1.9 K) Vacuum (10-13 atm) Magnets (8 T) G. Anelli – Italy@CERN - 10.10.2011 Detector Technologies Challenge: sample the results of up to 600 million proton-proton collisions per second! LHC detectors have sophisticated electronic trigger systems that precisely measure the passage time of a particle to accuracies in the region of a few billionths of a second. The trigger system also registers the location of the particles to millionths of a metre. This is essential for ensuring that the particle recorded in successive layers of a detector is one and the same. G. Anelli – Italy@CERN - 10.10.2011 Computing Technologies: the Grid After filtering, CERN detectors select ~100 interesting 8 Megabyte (8MB) A digital photo collisions per second. 1 Gigabyte (1GB) Several MBs of data to be stored for each collision... = 1000MB A DVD movie up to 15 Petabytes/year of data! 1 Terabyte (1TB) = 1000GB World annual LHC Computing Grid: book production Integrate over 100,000 15 Petabytes (15PB) processors from over = 15000TB 170 sites in 34 countries Annual LHC data output into a global computing resource.
  • Overcoming Detector Limitations of X- Ray Photon Counting for Preclinical Microcomputed Tomography

    Overcoming Detector Limitations of X- Ray Photon Counting for Preclinical Microcomputed Tomography

    Overcoming detector limitations of x- ray photon counting for preclinical microcomputed tomography Matthew Holbrook Darin P. Clark Cristian T. Badea Matthew Holbrook, Darin P. Clark, Cristian T. Badea, “Overcoming detector limitations of x-ray photon counting for preclinical microcomputed tomography,” J. Med. Imag. 6(1), 011004 (2018), doi: 10.1117/1.JMI.6.1.011004. Journal of Medical Imaging 6(1), 011004 (Jan–Mar 2019) Overcoming detector limitations of x-ray photon counting for preclinical microcomputed tomography Matthew Holbrook, Darin P. Clark, and Cristian T. Badea* Duke University, Center for In Vivo Microscopy, Department of Radiology, Durham, North Carolina, United States Abstract. Spectral computed tomography (CT) using photon counting detectors (PCDs) can provide accurate tissue composition measurements by utilizing the energy dependence of x-ray attenuation in different materials. PCDs are especially suited for K-edge imaging, revealing the spatial distribution of select imaging probes through quantitative material decomposition. We report on a prototype spectral micro-CT system with a CZT- based PCD (DxRay, Inc.) that has 16 × 16 pixels of 0.5 × 0.5 mm2, a thickness of 3 mm, and four energy thresh- olds. Due to the PCD’s limited size (8 × 8 mm2), our system uses a translate-rotate projection acquisition strategy to cover a field of view relevant for preclinical imaging (∼4.5 cm). Projection corrections were imple- mented to minimize artifacts associated with dead pixels and projection stitching. A sophisticated iterative algo- rithm was used to reconstruct both phantom and ex vivo mouse data. To achieve preclinically relevant spatial resolution, we trained a convolutional neural network to perform pan-sharpening between low-resolution PCD data (247-μm voxels) and high-resolution energy-integrating detector data (82-μm voxels), recovering a high- resolution estimate of the spectral contrast suitable for material decomposition.
  • Element-Specific Spectral Imaging of Multiple Contrast Agents: a Phantom

    Element-Specific Spectral Imaging of Multiple Contrast Agents: a Phantom

    Published by IOP Publishing for Sissa Medialab Received: November 21, 2017 Revised: January 23, 2018 Accepted: January 24, 2018 Published: February 6, 2018 TECHNICAL REPORT Element-specific spectral imaging of multiple contrast 2018 JINST 13 T02001 agents: a phantom study R.K. Panta,a;b;1 S.T. Bell,b J.L. Healy,d R. Aamir,a;b C.J. Bateman,f M. Moghiseh,a A.P.H. Butlera;b;c;e and N.G. Andersona aDepartment of Radiology, University of Otago, 2 Riccarton Ave, Christchurch 8140, New Zealand bMARS Bioimaging Ltd., 29a Clyde Rd, Christchurch 8140, New Zealand cDepartment of Physics and Astronomy, University of Canterbury, Christchurch 8140, New Zealand dDepartment of Biology, University of Canterbury, Private Bag 4800, Christchurch 8140, New Zealand eEuropean Centre for Nuclear Research (CERN), Geneva, Switzerland f Lincoln Agritech Limited, Engineering Drive, Lincoln University, Christchurch 7460, New Zealand E-mail: [email protected] Abstract: This work demonstrates the feasibility of simultaneous discrimination of multiple con- trast agents based on their element-specific and energy-dependent X-ray attenuation properties using a pre-clinical photon-counting spectral CT. We used a photon-counting based pre-clinical spectral CT scanner with four energy thresholds to measure the X-ray attenuation properties of various concentrations of iodine (9, 18 and 36 mg/ml), gadolinium (2, 4 and 8 mg/ml) and gold (2, 4 and 8 mg/ml) based contrast agents, calcium chloride (140 and 280 mg/ml) and water. We evaluated the spectral imaging performances of different energy threshold schemes between 25 to 82 keV at 118 kVp, based on K-factor and signal-to-noise ratio and ranked them.
  • MARS) for Detection of Arthroplasty Implant Failure Lawrence Chun Man Lau1,8, Wayne Yuk Wai Lee1,2,8, Anthony P

    www.nature.com/scientificreports OPEN Multi‑energy spectral photon‑counting computed tomography (MARS) for detection of arthroplasty implant failure Lawrence Chun Man Lau1,8, Wayne Yuk Wai Lee1,2,8, Anthony P. H. Butler3,4,5,6, Alex I. Chernoglazov6, Kwong Yin Chung1, Kevin Ki Wai Ho1, James Grifth7, Philip H. Butler4,5,6* & Patrick Shu Hang Yung1* To determine whether state‑of‑the‑art multi‑energy spectral photon‑counting computed tomography (MARS) can detect knee arthroplasty implant failure not detected by standard pre‑operative imaging techniques. A total knee arthroplasty (TKA) removed from a patient was reviewed. The extracted prosthesis [NexGen Legacy Posterior Stabilized (LPS) TKA] was analyzed as were pre‑operative imaging examination and compared with a MARS‑CT examination obtained of the extracted TKA prosthesis. Radiographs, fuoroscopy, ultrasound and MRI preoperatively did not reveal the cause of the implant failure. MARS CT images of the extracted prosthesis clearly showed the presence of posteromedial polyethylene and tibial tray wear which is compatible with the clinical appearance of the extracted TKA. MARS can identify polyethylene insert and metallic tibial tray wear as a cause of TKA failure, that could not be identifed with on standard pre‑operative imaging. Although clinical MARS CT system is still under development, this case does illustrate its potential clinical usefulness. This is the frst study to document how MARS CT imaging can detect orthopedic implant failure not detected by standard current imaging techniques. This system has a potential clinical application in orthopedic patients. Osteoarthritis is the single most common cause of disability in elderly adults and the knee is the most common involved site1.
  • Calibration Methods Influence Quantitative Material Decomposition in Photon-Counting Spectral CT Tyler E

    Calibration Methods Influence Quantitative Material Decomposition in Photon-Counting Spectral CT Tyler E

    Calibration methods influence quantitative material decomposition in photon-counting spectral CT Tyler E. Curtis and Ryan K. Roeder* Department of Aerospace and Mechanical Engineering, Bioengineering Graduate Program, University of Notre Dame, Notre Dame, IN 46556, USA ABSTRACT Photon-counting detectors and nanoparticle contrast agents can potentially enable molecular imaging and material decomposition in computed tomography (CT). Material decomposition has been investigated using both simulated and acquired data sets. However, the effect of calibration methods on material decomposition has not been systematically investigated. Therefore, the objective of this study was to investigate the influence of the range and number of contrast agent concentrations within a modular calibration phantom on quantitative material decomposition. A commercially- available photon-counting spectral micro-CT (MARS Bioimaging) was used to acquire images with five energy bins selected to normalize photon counts and leverage the contrast agent k-edge. Material basis matrix values were determined using multiple linear regression models and material decomposition was performed using a maximum a posteriori estimator. The accuracy of quantitative material decomposition was evaluated by the root mean squared error (RMSE), specificity, sensitivity, and area under the curve (AUC). An increased maximum concentration (range) in the calibration significantly improved RMSE, specificity and AUC. The effects of an increased number of concentrations in the calibration were not statistically significant for the conditions in this study. The overall results demonstrated that the accuracy of quantitative material decomposition in spectral CT is significantly influenced by calibration methods, which must therefore be carefully considered for the intended diagnostic imaging application. Keywords: Calibration phantom, contrast media, material decomposition, photon counting detector, spectral computed tomography 1.
  • Nanophosphor-Based Contrast Agents for Spectral X-Ray Imaging

    Nanophosphor-Based Contrast Agents for Spectral X-Ray Imaging

    nanomaterials Article Nanophosphor-Based Contrast Agents for Spectral X-ray Imaging Kevin Smith 1, Matthew Getzin 2, Josephine J. Garfield 1, Sanika Suvarnapathaki 3, Gulden Camci-Unal 4, Ge Wang 2,* and Manos Gkikas 1,* 1 Department of Chemistry, University of Massachusetts Lowell, Lowell, MA 01854, USA 2 Department of Biomedical Engineering, Rensselaer Polytechnic Institute, Troy, NY 12180, USA 3 Biomedical Engineering and Biotechnology Program, University of Massachusetts Lowell, Lowell, MA 01854, USA 4 Department of Chemical Engineering, University of Massachusetts Lowell, Lowell, MA 01854, USA * Correspondence: [email protected] (G.W.); [email protected] (M.G.); Tel.: +1-518-276-4259 (G.W.); +1-978-934-3245 (M.G.) Received: 5 July 2019; Accepted: 27 July 2019; Published: 30 July 2019 Abstract: Lanthanide-based nanophosphors (NPhs) are herein developed as contrast agents for spectral X-ray imaging, highlighting the chemical, macromolecular and structural differences derived from ligand exchange on computed tomography (CT) and solvent dispersibility. Taking advantage of the ability of spectral X-ray imaging with photon-counting detectors to perform image acquisition, analysis, and processing at different energy windows (bins), enhanced signal of our K-edge materials was derived, improving sensitivity of CT imaging, and differentiation between water, tumor-mimic phantoms, and contrast materials. Our results indicate that the most effective of our oleic acid-stabilized K-edge nanoparticles can achieve 2–4x higher contrast than the examined iodinated molecules, making them suitable for deep tissue imaging of tissues or tumors. On the other hand, ligand exchange yielding poly(acrylic acid)-stabilized K-edge nanoparticles allows for high dispersibility and homogeneity in water, but with a lower contrast due to the high density of the polymer grafted, unless further engineering is probed.
  • Workshop Summary

    Workshop Summary

    Workshop Summary Anthony Butler Radiologist and Physicist Disclaimer I have many biases - I am a clinician by job and physicist by hobby - My university has been a member of Medipix since 2006 - I am a founder of MARS Bioimaging Ltd Overview Participants and submissions Context Review of talks Conclusions Disclaimer NZ has a strange view of the world Disclaimer NZ has a strange view of the world Participants Context Review of talks Conclusions Scientific committee Michael Campbell, CERN Anthony Butler, Univ. of Canterbury & MARS Bioimaging Steffen Kappler, Siemens Healthineers Ewald Roessl, Philips Research Laboratories Katsuyuki (Ken) Taguchi, Johns Hopkins University Richard Thompson, Canon Medical Research Brian Yanoff, GE Global Research … with lots of assistance from Patricia Mage-Granados Initiation only for several reasons Participants 119 registrants 2017 => 130 2013 => 102 2015 => 112 2011 => 76 50 Industry; 46 Scientists; 23 Medical >85% are returning guests Participants and submissions Context Review of talks Conclusions Context The electromagnetic spectrum X-ray colour: Wavelength, Frequency, or Energy Context Spectral CT is true colour x-ray imaging Context Hounsfield, Nobel Prize 1979 Computed Tomography is 3D X-rays Context 300,000,000 people per year get a CT Hounsfield, Nobel Prize 1979 Computed Tomography is 3D X-rays Context Rontgen 1895, to CERN technology 2018 Context Before SpecXray Earnest Rutherford: We have no money, therefore we must think Particle physics pushes frontiers of knowledge Context Before
  • The MARS Photon Processing Cameras for Spectral CT

    The MARS Photon Processing Cameras for Spectral CT

    The MARS Photon Processing Cameras for Spectral CT A thesis submitted in partial fulfilment of the requirements for the Degree of Doctor of Philosophy in Physics in the University of Canterbury by Robert M.N. Doesburg University of Canterbury 2012 ii iii To my mother, and in memory of my father iv v Abstract This thesis is about the development of the MARS camera: a stan- dalone portable digital x-ray camera with spectral sensitivity. It is built for use in the MARS Spectral system from the Medipix2 and Medipix3 imaging chips. Photon counting detectors and Spectral CT are introduced, and Medipix is identified as a powerful new imaging device. The goals and strategy for the MARS camera are discussed. The Medipix chip physical, electronic and functional aspects, and ex- perience gained, are described. The camera hardware, firmware and supporting PC software are presented. Reports of experimental work on the process of equalisation from noise, and of tests of charge sum- ming mode, conclude the main body of the thesis. The camera has been actively used since late 2009 in pre-clinical re- search. A list of publications that derive from the use of the camera and the MARS Spectral scanner demonstrates the practical benefits already obtained from this work. Two of the publications are first- author, eight are co-authored, and a further four acknowledge use of the MARS camera as part of the MARS scanner. The work has been presented at three MARS group meetings, two departmental conferences, and at an internal Medipix3 collaboration meeting hosted by ESRF in Grenoble.
  • Nanoparticle Imaging Probes for Molecular Imaging with Computed Tomography and Application to Cancer Imaging Ryan K

    Nanoparticle Imaging Probes for Molecular Imaging with Computed Tomography and Application to Cancer Imaging Ryan K

    Nanoparticle Imaging Probes for Molecular Imaging with Computed Tomography and Application to Cancer Imaging Ryan K. Roeder,*a,b Tyler E. Curtis,a Prakash D. Nallathamby,a,b Lisa E. Irimata,a,b Tracie L. McGinnity,a,b Lisa E. Cole,a,b Tracy Vargo-Gogola,b,c and Karen D. Cowden Dahlb,c aDepartment of Aerospace and Mechanical Engineering, Bioengineering Graduate Program, University of Notre Dame, Notre Dame, IN 46556, USA; bHarper Cancer Research Institute, University of Notre Dame, Notre Dame, IN 46556, USA; cDepartment of Biochemistry and Molecular Biology, Indiana University Simon Cancer Center, Indiana University School of Medicine – South Bend, South Bend, IN 46617, USA ABSTRACT Precision imaging is needed to realize precision medicine in cancer detection and treatment. Molecular imaging offers the ability to target and identify tumors, associated abnormalities, and specific cell populations with overexpressed receptors. Nuclear imaging and radionuclide probes provide high sensitivity but subject the patient to a high radiation dose and provide limited spatiotemporal information, requiring combined computed tomography (CT) for anatomic imaging. Therefore, nanoparticle contrast agents have been designed to enable molecular imaging and improve detection in CT alone. Core-shell nanoparticles provide a powerful platform for designing tailored imaging probes. The composition of the core is chosen for enabling strong X-ray contrast, multi-agent imaging with photon-counting spectral CT, and multimodal imaging. A silica shell is used for protective, biocompatible encapsulation of the core composition, volume- loading fluorophores or radionuclides for multimodal imaging, and facile surface functionalization with antibodies or small molecules for targeted delivery. Multi-agent (k-edge) imaging and quantitative molecular imaging with spectral CT was demonstrated using current clinical agents (iodine and BaSO4) and a proposed spectral library of contrast agents (Gd2O3, HfO2, and Au).
  • MARS Imaging and Reconstruction Challenges

    MARS Imaging and Reconstruction Challenges

    The 14th International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine June 2017, Xi'an MARS imaging and reconstruction challenges Niels J. A. de Ruiteryz{, Philip H. Butler∗yzx, Anthony P. H. Butler∗yzx, Stephen T. Bellz, Alexander I. Chernoglazovz{, and Michael F. Walshz ∗Department of Physics and Astronomy, University of Canterbury, New Zealand yDepartment of Radiology, University of Otago, New Zealand zMARS Bioimaging Ltd, Christchurch, New Zealand xEuropean Centre for Nuclear Research (CERN, Geneva, Switzerland) {HIT Lab NZ, University of Canterbury, New Zealand Abstract—The MARS programme is developing spectral CT spectral CT datasets, some of which have been made publicly scanners to advance medicine. Our system is built upon the available including the raw, processed, and visualised data. Medipix3RX ASIC developed by a CERN led collaboration. The It is our hope that these datasets, together with those related Medipix3RX has 8 counters where some counters use charge summing technology to improve energy resolution. Our scanners with this paper, can promote improvements in spectral CT include small bore scanners, pre-clinical systems used by our reconstruction algorithms to produce artefact free, quantitative partners at the Mayo Clinic, Notre Dame University, and the material volumetric datasets. University of Otago, and a large bore scanner (a human scale The reconstruction solution employed in the current MARS system in development). In this talk we demonstrate some of the applications, and publicly available datasets, that show how system adopts a two-step approach. First, the data is recon- spectral CT can enhance pre-clinical and medical imaging. Our structed into a series of attenuation volumes using common CT primary challenge for the future is to improve our reconstruction reconstruction methods.
  • Detectors in X-Ray Imaging

    Detectors in X-Ray Imaging

    Using MARS Spectral CT for Identifying Biomedical Nanoparticles A thesis submitted in partial fulfilment of the requirements for the Degree of Doctor of Philosophy in Medical Physics in the University of Canterbury by Raja Aamir Younis University of Canterbury 2013 1 To my late mother 2 3 Abstract The goal of this research is to contribute to the development of MARS spectral CT and to demonstrate the feasibility of molecular imaging using the technology. MARS is a newly developed micro CT scanner, incorporating the latest spectroscopic Medipix photon counting detector. I show that the scanner can identify both drug markers and stenosis of atherosclerosis labelled with non-toxic nanoparticles. I also show that spectral computed tomography using Medipix x-ray detectors can give quantitative measurements of concentrations of gold nanoparticles in phantoms, mice and excised atheroma. The characterisation of the Medipix2 assemblies with Si and CdTe x-ray sensors using poly-energetic x-ray sources has been performed. I measure the inhomogeneities within the sensors; individual pixel sensitivity response; and their saturation effects at higher photon fluxes. The effects of charge sharing on the performance of Medipix2 have been assessed, showing that it compromises energy resolution much more than spatial resolution. I have commissioned several MARS scanners incorporating several different Medipix2 and Medipix3 cameras. After the characterization of x-ray detectors and the geometrical assessment of MARS-CT, spectral CT data has been acquired, using x-ray energies that are appropriate for human imaging. The outcome shows that MARS scanner has the ability to discriminate among low atomic number materials, and from various concentrations of heavy atoms.