Production of Phycobiliproteins by Arthrospira Platensis Under Different
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University of New Orleans ScholarWorks@UNO University of New Orleans Theses and Dissertations Dissertations and Theses Summer 8-4-2011 Identification and characterization of enzymes involved in the biosynthesis of different phycobiliproteins in cyanobacteria Avijit Biswas University of New Orleans, [email protected] Follow this and additional works at: https://scholarworks.uno.edu/td Part of the Biochemistry, Biophysics, and Structural Biology Commons Recommended Citation Biswas, Avijit, "Identification and characterization of enzymes involved in the biosynthesis of different phycobiliproteins in cyanobacteria" (2011). University of New Orleans Theses and Dissertations. 446. https://scholarworks.uno.edu/td/446 This Dissertation-Restricted is protected by copyright and/or related rights. It has been brought to you by ScholarWorks@UNO with permission from the rights-holder(s). You are free to use this Dissertation-Restricted in any way that is permitted by the copyright and related rights legislation that applies to your use. For other uses you need to obtain permission from the rights-holder(s) directly, unless additional rights are indicated by a Creative Commons license in the record and/or on the work itself. This Dissertation-Restricted has been accepted for inclusion in University of New Orleans Theses and Dissertations by an authorized administrator of ScholarWorks@UNO. For more information, please contact [email protected]. Identification and characterization of enzymes involved in biosynthesis of different phycobiliproteins in cyanobacteria A Thesis Submitted to the Graduate Faculty of the University of New Orleans in partial fulfillment of the requirements for the degree of Doctor of Philosophy In Chemistry (Biochemistry) By Avijit Biswas B.S. -
Nobel Lecture by Roger Y. Tsien
CONSTRUCTING AND EXPLOITING THE FLUORESCENT PROTEIN PAINTBOX Nobel Lecture, December 8, 2008 by Roger Y. Tsien Howard Hughes Medical Institute, University of California San Diego, 9500 Gilman Drive, La Jolla, CA 92093-0647, USA. MOTIVATION My first exposure to visibly fluorescent proteins (FPs) was near the end of my time as a faculty member at the University of California, Berkeley. Prof. Alexander Glazer, a friend and colleague there, was the world’s expert on phycobiliproteins, the brilliantly colored and intensely fluorescent proteins that serve as light-harvesting antennae for the photosynthetic apparatus of blue-green algae or cyanobacteria. One day, probably around 1987–88, Glazer told me that his lab had cloned the gene for one of the phycobilipro- teins. Furthermore, he said, the apoprotein produced from this gene became fluorescent when mixed with its chromophore, a small molecule cofactor that could be extracted from dried cyanobacteria under conditions that cleaved its bond to the phycobiliprotein. I remember becoming very excited about the prospect that an arbitrary protein could be fluorescently tagged in situ by genetically fusing it to the phycobiliprotein, then administering the chromophore, which I hoped would be able to cross membranes and get inside cells. Unfortunately, Glazer’s lab then found out that the spontane- ous reaction between the apoprotein and the chromophore produced the “wrong” product, whose fluorescence was red-shifted and five-fold lower than that of the native phycobiliprotein1–3. An enzyme from the cyanobacteria was required to insert the chromophore correctly into the apoprotein. This en- zyme was a heterodimer of two gene products, so at least three cyanobacterial genes would have to be introduced into any other organism, not counting any gene products needed to synthesize the chromophore4. -
First Insights Into the Impacts of Benthic Cyanobacterial Mats on Fish
www.nature.com/scientificreports OPEN First insights into the impacts of benthic cyanobacterial mats on fsh herbivory functions on a nearshore coral reef Amanda K. Ford 1,2*, Petra M. Visser 3, Maria J. van Herk3, Evelien Jongepier 4 & Victor Bonito5 Benthic cyanobacterial mats (BCMs) are becoming increasingly common on coral reefs. In Fiji, blooms generally occur in nearshore areas during warm months but some are starting to prevail through cold months. Many fundamental knowledge gaps about BCM proliferation remain, including their composition and how they infuence reef processes. This study examined a seasonal BCM bloom occurring in a 17-year-old no-take inshore reef area in Fiji. Surveys quantifed the coverage of various BCM-types and estimated the biomass of key herbivorous fsh functional groups. Using remote video observations, we compared fsh herbivory (bite rates) on substrate covered primarily by BCMs (> 50%) to substrate lacking BCMs (< 10%) and looked for indications of fsh (opportunistically) consuming BCMs. Samples of diferent BCM-types were analysed by microscopy and next-generation amplicon sequencing (16S rRNA). In total, BCMs covered 51 ± 4% (mean ± s.e.m) of the benthos. Herbivorous fsh biomass was relatively high (212 ± 36 kg/ha) with good representation across functional groups. Bite rates were signifcantly reduced on BCM-dominated substratum, and no fsh were unambiguously observed consuming BCMs. Seven diferent BCM-types were identifed, with most containing a complex consortium of cyanobacteria. These results provide insight into BCM composition and impacts on inshore Pacifc reefs. Tough scarcely mentioned in the literature a decade ago, benthic cyanobacterial mats (BCMs) are receiving increasing attention from researchers and managers as being a nuisance on tropical coral reefs worldwide1–4. -
Phycobiliprotein Evolution (Phycoerythrin/Phycobilisomes/Cell Wall/Photosynthesis/Prokaryotic Evolution) THOMAS A
Proc. Natd Acad. Sci. USA Vol. 78, No. 11, pp. 6888-6892, November 1981 Botany Morphology of a novel cyanobacterium and characterization of light-harvesting complexes from it: Implications for phycobiliprotein evolution (phycoerythrin/phycobilisomes/cell wall/photosynthesis/prokaryotic evolution) THOMAS A. KURSAR*, HEWSON SwIFTt, AND RANDALL S. ALBERTEt tBarnes Laboratory, Department ofBiology, and *Department of Biophysics and Theoretical Biology, University of Chicago, Chicago, Illinois 60637 Contributed by Hewson Swift, July 2, 1981 ABSTRACT The morphology of the marine cyanobacterium After examining the in vivo spectral properties of several of DC-2 and two light-harvesting complexes from it have been char- the recently discovered species ofcyanobacteria, it came to our acterized. DC-2 has an outer cell wall sheath not previously ob- attention that one of the PE-containing types termed DC-2 served, the purified phycoerythrin shows many unusual proper- showed some rather unusual features. Further study revealed ties that distinguish it from all phycoerythrins characterized to that this species possesses novel PE, phycobilisomes, and outer date, and isolated phycobilisomes have a single absorption band cell wall sheath; these characteristics suggest that it should be at 640 nm in the phycocyanin-allophycocyanin region of the spec- trum. On the basis of these observations we suggest that DC-2, placed in a new phylogenetic branch for the cyanobacteria. rather than being a member of the Synechococcus group, should be placed in its own taxonomic group. In addition, the particular MATERIALS AND METHODS properties of the isolated phycoerythrin suggest that it may be An axenic representative of an early stage in the evolution of the phyco- isolate of Synechococcus sp., clone DC-2, obtained erythrins. -
Spirulina Platensis an “Ultimate Food”: a Review
© 2019 IJRAR March 2019, Volume 6, Issue 1 www.ijrar.org (E-ISSN 2348-1269, P- ISSN 2349-5138) Spirulina Platensis an “Ultimate Food”: A Review 1Akshita Sharma, 2 Kamalpreet Kaur, 3 Manjri, 4 Deepti Marwaha 1,4Assistant Professor, 2,3Research Scholar 1Department of Biotechnology, 1Guru Nanak Girls College, Model town, Ludhiana, India. Introduction: Spirulina platensis is non toxic blue green algae which is filamentous cyanobacteria taken by the human as dietary supplement and use it as a food. Spirulina platensis is a biomass which is dried form of Arthrospira platensis .This blue green algae is the primary diet in humans, animals and aquatic life. Spirulina platensis is easily digested due to absence of cell wall .This blue green algae is an important diet in humans and in animals. In humans it is used as a source of protein and vitamin without causes any harmful effect. It is rich in phenolic acids, tocopherol and y-linolenic acids [1]. Spirulina platensis is most commonly available and widely used genus which has been extensively studied in different fields specially food and medicine [2]. Spirulina platensis was originally discovered in ponds and lakes. Spirulina platensis has been proven to boost the immune system, bolster the energy and reduce the risk of many cancers and infection. The nutritional quantity of the Blue-green algae Spirulina platensis has been evaluated on the basis of its chemical and amino acid composition and feeding trails with rats [3]. Due to high content of highly valuable proteins, indispensable amino acids, vitamins, beta carotene and other pigments, mineral substances, indispensable fatty acids and polysaccharides, Spirulina platensis has been found suitable for use as bioactive additives [4]. -
Production, Purification, and Study of the Amino Acid Composition of Microalgae Proteins
molecules Article Production, Purification, and Study of the Amino Acid Composition of Microalgae Proteins Anna Andreeva 1, Ekaterina Budenkova 1, Olga Babich 1 , Stanislav Sukhikh 1,2, Elena Ulrikh 3, Svetlana Ivanova 4,5,* , Alexander Prosekov 6 and Vyacheslav Dolganyuk 1,2 1 Institute of Living Systems, Immanuel Kant Baltic Federal University, 236016 Kaliningrad, Russia; [email protected] (A.A.); [email protected] (E.B.); [email protected] (O.B.); [email protected] (S.S.); [email protected] (V.D.) 2 Department of Bionanotechnology, Kemerovo State University, 650043 Kemerovo, Russia 3 Kuzbass State Agricultural Academy, 650056 Kemerovo, Russia; [email protected] 4 Natural Nutraceutical Biotesting Laboratory, Kemerovo State University, 650043 Kemerovo, Russia 5 Department of General Mathematics and Informatics, Kemerovo State University, 650043 Kemerovo, Russia 6 Laboratory of Biocatalysis, Kemerovo State University, 650043 Kemerovo, Russia; [email protected] * Correspondence: [email protected]; Tel.: +7-384-239-6832 Abstract: Microalgae are known to be rich in protein. In this study, we aim to investigate methods of producing and purifying proteins of 98 microalgae including Chlorella vulgaris, Arthrospira platensis, Nostoc sp., Dunaliella salina, and Pleurochrysis carterae (Baltic Sea). Therefore, we studied their amino acid composition and developed a two-stage protein concentrate purification method from the microalgae biomass. After an additional stage of purification, the mass fraction of protein substances with a molecular weight greater than 50 kDa in the protein concentrate isolated from the biomass of the microalga Dunaliella salina increased by 2.58 times as compared with the mass fraction before Citation: Andreeva, A.; Budenkova, filtration. -
Arthrospira Platensis) for Its Antioxidant and Neuroprotective Effect
Review Article http://doi.org/10.18231/j.ijcaap.2019.024 A review on spirulina (Arthrospira Platensis) for its antioxidant and neuroprotective effect Rashmi B.R Lecturer, Dept, of Physiology, A.J. Institute of Allied Health Sciences, Kuntikana, Mangalore, Karnataka, India *Corresponding Author: Rashmi B.R Email: [email protected] Abstract Spirulina (Arthrospira platensis), belongs to a class of cyanobacteria. It is a free-floating filamentous microalgae and is also capable of photosynthesis. The nutritional content of Spirulina reveals high content of protein (60-70% by dry weight), vitamins, minerals, essential fatty acids, and other nutrients. The Food and Agriculture Organization of the United Nations (FAO) position paper describes Arthrospira platensis as follows: "An easily digestible high protein product with high levels of beta-carotene, vitamin B12, iron and trace minerals, and the rare essential fatty acid γ-linolenic acid also called gamma- linolenic acid (GLA), or omega-6". Arthrospira platensis has been generally recognized as safe (GRAS) for human consumption. Human clinical studies and animal studies over the past several decades support such notion. Also, FDA had no question on the GRAS notice of Arthrospira platensis. Keywords: Arthrospira Platensis. Introduction functions such as antioxidant, antibacterial, antiviral, Spirulina (Arthrospira platensis) belongs to family of anticancer, anti-inflammatory, anti-allergic and anti- blue-green algae. They have characteristic spiral shape diabetic and plethora of beneficial functions.5 in their morphology apperence.1 It is free-floating Toxicological studies on Arthrospira platensis filamentous microalgae growing in alkaline water have proven Spirulina's safety. Spirulina now belongs bodies.2 to the substances that are listed by the US Food and Arthrospira platensis is considered under phylum Drug Administration under the category Generally of Cyanobacteria. -
An Early Requisite for Efficient Photosynthesis in Cyanobacteria
EXCLI Journal 2015;14:268-289 – ISSN 1611-2156 Received: December 16, 2014, accepted: January 16, 2015, published: February 20, 2015 Original article: THE PHYCOBILISOMES: AN EARLY REQUISITE FOR EFFICIENT PHOTOSYNTHESIS IN CYANOBACTERIA Niraj Kumar Singh1,$, Ravi Raghav Sonani2,$, Rajesh Prasad Rastogi2,*, Datta Madamwar2,* 1 Shri A. N. Patel PG Institute (M. B. Patel Science College Campus), Anand, Sardargunj, Anand – 388001, Gujarat, India 2 BRD School of Biosciences, Sardar Patel Maidan, Vadtal Road, Post Box No. 39, Sardar Patel University, Vallabh Vidyanagar 388 120, Anand, Gujarat, India * Corresponding authors: Tel.: +91 02692 229380; fax: +91 02692 231042/236475; E-mail addresses: [email protected] (R.P. Rastogi), [email protected] (D. Madamwar) $ These authors have contributed equally. http://dx.doi.org/10.17179/excli2014-723 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/). ABSTRACT Cyanobacteria trap light energy by arrays of pigment molecules termed “phycobilisomes (PBSs)”, organized proximal to "reaction centers" at which chlorophyll perform the energy transduction steps with highest quantum efficiency. PBSs, composed of sequential assembly of various chromophorylated phycobiliproteins (PBPs), as well as nonchromophoric, basic and hydrophobic polypeptides called linkers. Atomic resolution structure of PBP is a heterodimer of two structurally related polypeptides but distinct specialised polypeptides- α and β, made up of seven alpha-helices each which played a crucial step in evolution of PBPs. PBPs carry out various light de- pendent responses such as complementary chromatic adaptation. The aim of this review is to summarize and discuss the recent progress in this field and to highlight the new and the questions that remain unresolved. -
Phycobiliproteins and Tandem Conjugates
Phycobiliproteins & Tandem Conjugates Multicolor Flow Cytometric Detection with Superior Fluorescence AAT Bioquest® Overview of Phycobiliproteins Phycobiliproteins are a family of photosynthetic light-harvesting proteins derived from microalgae and cyanobacteria. These proteins contain covalently attached linear tetrapyrrole groups, known as phycobilins, which play a critical role in capturing light energy. In microalgae and cyanobacteria, energy absorbed by these phycobilins is efficiently transferred via fluorescence resonance energy transfer (FRET), to chlorophyll pigments for their use in photosynthetic reactions (Figure 1). Because phycobiliproteins have extremely high fluorescence quantum yields and absorbance coefficients over a wide spectral range, they serve as valuable fluorescent tags in a variety of fluorescence applications, primarily flow cytometry. Phycobiliproteins conjugated to molecules having biological specificity (e.g. immunoglobulin, protein A or streptavidin) are effective tools in fluorescence activated cell sorting (FACS), imaging, immunophenotyping and immunoassay applications. Compared to organic and synthetic fluorescent dyes, phycobiliproteins offer several advantages when used as fluorescent probes, including: • Intense long-wavelength excitation and emission profiles to minimize auto-fluorescence from biological materials • Minimal fluorescence quenching contributed by the covalent binding of phycobilins to the protein backbone • Highly water-soluble to facilitate chemical manipulation for conjugation reactions -
Redalyc. the Effect of Spirulina (Arthrospira Platensis ) (Oscillatoriales: Cyanobacteria) on the Experimental Breeding of Pseud
Revista de Biología Tropical ISSN: 0034-7744 [email protected] Universidad de Costa Rica Costa Rica Prepelitchi, Lucila; Pujadas, Julieta M.; Wisnivesky-Colli, Cristina The effect of spirulina (Arthrospira platensis ) (Oscillatoriales: Cyanobacteria) on the experimental breeding of Pseudosuccinea columella (Basommatophora: Lymnaeidae) Revista de Biología Tropical, vol. 63, núm. 2, enero, 2015, pp. 479-489 Universidad de Costa Rica San Pedro de Montes de Oca, Costa Rica Available in: http://www.redalyc.org/articulo.oa?id=44938603011 Abstract Snails of the family Lymnaeidae, as Pseudosuccinea columella , are the intermediate hosts of Fasciola hepatica , the causative agent of fasciolosis in human and livestock all over the world. A thorough knowledge of snail biology is essential for describing the transmission dynamics and for controlling this disease. Since food quality has had a significant effect on snail growth, fecundity and fertility, in this study we evaluated the use of spirulina ( Arthrospira platensis ) as a food resource for the artificial breeding of P. columella , an invasive snail and the main intermediate host of F. hepatica in Northeastern Argentina. The main purpose was to measure the effect of spirulina on fitness parameters such as survival rate, growth rate, size at first reproduction, lifetime fecundity and viable offspring. A total of 20 676 newly-laid F 2 eggs were used; half of them were fed with lettuce (treatment L) and the other half with lettuce plus spirulina (treatment L+S). In comparison with P. colu - mella snails fed only with lettuce, we found that P. columella fed with lettuce plus spirulina: 1) showed higher survival rates, 2) grew faster and showed higher growth increments, 3) attained sexual maturity earlier in time (L+S:60 days vs. -
Potential Applications of Native Cyanobacterium Isolate (Arthrospira Platensis NIOF17/003) for Biodiesel Production and Utilizat
sustainability Article Potential Applications of Native Cyanobacterium Isolate (Arthrospira platensis NIOF17/003) for Biodiesel Production and Utilization of Its Byproduct in Marine Rotifer (Brachionus plicatilis) Production Mohamed A. Zaki 1, Mohamed Ashour 2,* , Ahmed M. M. Heneash 2, Mohamed M. Mabrouk 3, Ahmed E. Alprol 2, Hanan M. Khairy 2, Abdelaziz M. Nour 1, Abdallah Tageldein Mansour 4,5 , Hesham A. Hassanien 4,6 , Ahmed Gaber 7 and Mostafa E. Elshobary 8,9,* 1 Animal and Fish Production Department, Faculty of Agriculture, Alexandria University, Alexandria 21545, Egypt; [email protected] (M.A.Z.); [email protected] (A.M.N.) 2 National Institute of Oceanography and Fisheries (NIOF), Cairo 11516, Egypt; [email protected] (A.M.M.H.); [email protected] (A.E.A.); [email protected] (H.M.K.) 3 Fish Division, Animal Production Department, Faculty of Agriculture, Al-Azhar University, Cairo 11823, Egypt; [email protected] 4 Animal and Fish Production Department, College of Agricultural and Food Sciences, King Faisal University, P.O. Box 420, Al-Ahsa 31982, Saudi Arabia; [email protected] (A.T.M.); [email protected] (H.A.H.) 5 Fish and Animal Production Department, Faculty of Agriculture (Saba Basha), Alexandria University, Citation: Zaki, M.A.; Ashour, M.; Alexandria 21531, Egypt Heneash, A.M.M.; Mabrouk, M.M.; 6 Animal Production Department, Faculty of Agriculture, Cairo University, Gamma St., Giza 12613, Egypt Alprol, A.E.; Khairy, H.M.; Nour, 7 Department of Biology, College of Science, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia; A.M.; Mansour, A.T.; Hassanien, H.A.; [email protected] 8 Gaber, A.; et al. -
Detailed Characterization of the Arthrospira Type Species Separating
www.nature.com/scientificreports OPEN Detailed characterization of the Arthrospira type species separating commercially grown Received: 13 August 2018 Accepted: 27 November 2018 taxa into the new genus Limnospira Published: xx xx xxxx (Cyanobacteria) Paulina Nowicka-Krawczyk 1, Radka Mühlsteinová2 & Tomáš Hauer 2 The genus Arthrospira has a long history of being used as a food source in diferent parts of the world. Its mass cultivation for production of food supplements and additives has contributed to a more detailed study of several species of this genus. In contrast, the type species of the genus (A. jenneri), has scarcely been studied. This work adopts a polyphasic approach to thoroughly investigate environmental samples of A. jenneri, whose persistent bloom was noticed in an urban reservoir in Poland, Central Europe. The obtained results were compared with strains designated as A. platensis, A. maxima, and A. fusiformis from several culture collections and other Arthrospira records from GenBank. The comparison has shown that A. jenneri difers from popular species that are massively utilized commercially with regard to its cell morphology, ultrastructure and ecology, as well as its 16S rRNA gene sequence. Based on our fndings, we propose the establishment of a new genus, Limnospira, which currently encompasses three species including the massively produced L. (A.) fusiformis and L. (A.) maxima with the type species Limnospira fusiformis. Among the simple trichal cyanobacteria, three genera possess helically-coiled trichomes as a prominent dia- critical feature: Spirulina Turpin ex Gomont 1892, Halospirulina Nübel, Garcia-Pichel et Muyzer 2000, and Arthrospira Stizenberger ex Gomont 1892. Te latter is a widely-known taxon with long history of use as a food source, for example as dihé in Africa or tecuitlatl in Mexico1–3.